AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80322

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80322.t1 MTR_8g090165 94.783 1706 70 3 1 1691 1 1702 0.0 3285
MS.gene80322.t1 MTR_8g011200 76.639 1708 265 11 13 1691 35 1637 0.0 2611
MS.gene80322.t1 MTR_3g408440 73.712 1708 427 7 3 1691 5 1709 0.0 2555
MS.gene80322.t1 MTR_8g011330 73.567 1710 425 8 1 1691 1 1702 0.0 2546
MS.gene80322.t1 MTR_8g011210 71.529 1714 450 11 1 1691 1 1699 0.0 2455
MS.gene80322.t1 MTR_8g011230 68.695 1709 504 10 1 1690 1 1697 0.0 2352
MS.gene80322.t1 MTR_2g067030 88.708 921 85 2 785 1690 669 1585 0.0 1686
MS.gene80322.t1 MTR_2g067030 61.649 1249 415 18 1 1221 1 1213 0.0 1436
MS.gene80322.t1 MTR_6g015173 67.192 762 216 8 340 1094 257 991 0.0 998
MS.gene80322.t1 MTR_6g015173 46.262 709 312 11 997 1689 661 1316 0.0 580
MS.gene80322.t1 MTR_6g015173 76.471 221 50 2 51 270 39 258 5.37e-90 322
MS.gene80322.t1 MTR_8g085280 30.901 466 247 18 8 445 1144 1562 1.24e-43 176
MS.gene80322.t1 MTR_6g015170 79.487 39 8 0 7 45 38 76 4.92e-14 70.1
MS.gene80322.t1 MTR_5g039040 62.295 61 16 1 168 221 56 116 6.11e-14 70.5
MS.gene80322.t1 MTR_7g016690 78.571 42 9 0 182 223 47 88 1.51e-13 68.2
MS.gene80322.t1 MTR_7g012050 76.923 39 9 0 181 219 11 49 3.75e-12 63.2
MS.gene80322.t1 MTR_5g060960 57.895 57 18 1 165 221 93 143 8.37e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80322.t1 AT3G48770 49.971 1721 806 22 3 1688 195 1895 0.0 1664
MS.gene80322.t1 AT3G48770 49.971 1721 806 22 3 1688 195 1895 0.0 1664
MS.gene80322.t1 AT3G28020 41.481 270 95 7 155 423 36 243 1.18e-51 183
MS.gene80322.t1 AT4G13750 32.908 392 198 16 8 376 1162 1511 6.42e-37 154

Find 355 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTGGTCTTCAAGATTTA+AGG 0.093581 2.4:+42236869 MS.gene80322:CDS
ATCGGCGTGGTTGTTGATTT+TGG 0.135945 2.4:+42238529 MS.gene80322:CDS
CTTAAAATCACCCTCAAATT+TGG 0.153756 2.4:+42238255 MS.gene80322:CDS
TGGTTTCAAGAGTGTGTTTC+TGG 0.176004 2.4:+42235669 MS.gene80322:CDS
ATAAAGCTGCCAAGAAAATT+TGG 0.198820 2.4:+42239437 MS.gene80322:CDS
TGGCTTAAAGTTTCCGTTAA+TGG 0.213641 2.4:+42237704 MS.gene80322:CDS
TCTTTGCTTCCTGTTGTTAC+AGG 0.221014 2.4:-42239772 None:intergenic
CTCATTGATGAGAGCTTCTA+TGG 0.223705 2.4:+42237812 MS.gene80322:CDS
TATTTGTGCCCAAATGTTTC+AGG 0.227165 2.4:-42239714 None:intergenic
GCCCATTTGCTCACATTTGC+AGG 0.230967 2.4:-42237380 None:intergenic
GGCTTCTCCTCAACCCATTC+AGG 0.234048 2.4:-42235781 None:intergenic
AAGTAAGCTTGATCAATAAA+AGG 0.238617 2.4:-42238142 None:intergenic
TGTCATTTCTTTCATGTTGC+AGG 0.239049 2.4:+42238626 MS.gene80322:CDS
TGCTTGTTCTAGCCTGAAAA+TGG 0.240607 2.4:+42240082 MS.gene80322:CDS
AAGATCCTTGGTGTTGTTAC+TGG 0.241657 2.4:+42238868 MS.gene80322:CDS
CTTGAAAGCTGCTGTTTAAC+AGG 0.244379 2.4:-42235895 None:intergenic
CCTGCGGCTCATCCAACTTC+TGG 0.244674 2.4:-42240274 None:intergenic
GAAAGAGATTGTCCAGAAAT+TGG 0.251652 2.4:+42239037 MS.gene80322:CDS
CCAGACGTGGGGCTGTATTT+TGG 0.253639 2.4:+42238426 MS.gene80322:CDS
ATGTGTTCCATCGGCCTTTA+TGG 0.256561 2.4:+42236383 MS.gene80322:CDS
CTATGAAGCCTCTCCTGATT+TGG 0.260100 2.4:-42236216 None:intergenic
GGTTGACCTTATCCGGCTTC+AGG 0.268870 2.4:-42235873 None:intergenic
TTAAGTGCTTGATAACAATT+TGG 0.270152 2.4:-42238237 None:intergenic
ATGCCATCAAAGGCTGCTTC+TGG 0.271546 2.4:-42237127 None:intergenic
TTGATGATTATGTTGATCTT+TGG 0.277427 2.4:+42239626 MS.gene80322:CDS
GAAGGGAAATTAAGACATTT+AGG 0.279343 2.4:-42238916 None:intergenic
CCATATAAAATGCATTGTTT+TGG 0.288662 2.4:-42238745 None:intergenic
CTGCATAAGATGAGGAATTT+AGG 0.289962 2.4:-42237463 None:intergenic
GCAGGCCAATTCACAGGTTC+CGG 0.295147 2.4:+42237482 MS.gene80322:CDS
ATCTCTTCAACATGCTCTTT+TGG 0.297767 2.4:-42228932 None:intergenic
GCTCCTATTGCCTTTCTTTG+TGG 0.300947 2.4:-42235375 None:intergenic
ATGCCACTCGTTGACAACTA+TGG 0.304751 2.4:+42237323 MS.gene80322:CDS
GTGTCACAGAAACAAGAAAA+AGG 0.307573 2.4:+42237348 MS.gene80322:CDS
TTCTTCAGATGACGGTTATC+AGG 0.310683 2.4:-42239829 None:intergenic
GATGTTTATCCTGAAACATT+TGG 0.311080 2.4:+42239705 MS.gene80322:CDS
CTCAAATGGCGAACTTTCAA+TGG 0.313505 2.4:-42236481 None:intergenic
TGAAAACACATGCTGGTTAT+AGG 0.316775 2.4:+42239061 MS.gene80322:CDS
TTCTTAATTCGCTCGCCATT+GGG 0.317250 2.4:+42237749 MS.gene80322:CDS
GTGATTGATCATAAATTCTA+TGG 0.318339 2.4:+42238469 MS.gene80322:CDS
GAAGACTTCTCCTGAGATAT+TGG 0.326955 2.4:-42237988 None:intergenic
GTAGGCTGCTGTCTGAATTC+TGG 0.327095 2.4:+42236613 MS.gene80322:CDS
AACTGGTCTTCAAGATTTAA+GGG 0.333106 2.4:+42236870 MS.gene80322:CDS
CATGTGGAAGCAAAAGTTTC+CGG 0.342746 2.4:+42236128 MS.gene80322:CDS
CAGACAGAATTCAATGTAAT+CGG 0.346565 2.4:+42239192 MS.gene80322:CDS
CAAATCAGGAGAGGCTTCAT+AGG 0.348815 2.4:+42236217 MS.gene80322:CDS
TTAACAGGGTTGACCTTATC+CGG 0.359006 2.4:-42235880 None:intergenic
AAAGGATGCTCCTTGCTTGC+AGG 0.359775 2.4:+42239234 MS.gene80322:CDS
GAGAAAATTAATAAGCTTCC+CGG 0.361538 2.4:-42237501 None:intergenic
CTTGTTCATGGCTGATCAAT+TGG 0.362922 2.4:+42237030 MS.gene80322:CDS
TGCCATCAAAGGCTGCTTCT+GGG 0.365110 2.4:-42237126 None:intergenic
GTAAGAAACAAAAGGACTTC+GGG 0.368051 2.4:-42235925 None:intergenic
TATGCTCTTCATATAAACTT+TGG 0.372601 2.4:-42238990 None:intergenic
TATGAAGCCTCTCCTGATTT+GGG 0.372971 2.4:-42236215 None:intergenic
ATGTTTATCCTGAAACATTT+GGG 0.373249 2.4:+42239706 MS.gene80322:CDS
CTTATATCTCCTCCAAATGC+TGG 0.374935 2.4:+42237554 MS.gene80322:CDS
GAAGAGGAGTTGAAAACAAT+TGG 0.375017 2.4:+42237854 MS.gene80322:CDS
AATGGAATGCATCAAATTCT+TGG 0.376882 2.4:+42238309 MS.gene80322:CDS
TCAAGCTCCGGTATCAAGTT+TGG 0.377622 2.4:+42236437 MS.gene80322:CDS
TACAAAGAAAGATGACAAAA+TGG 0.378234 2.4:+42240217 MS.gene80322:CDS
AATCCAATCCAAAAGCAAAA+AGG 0.378620 2.4:-42237615 None:intergenic
CCTTGTCCACATTGCAGTCT+TGG 0.379743 2.4:+42235748 MS.gene80322:CDS
ACAGCTTCATGCCTCTTGTC+TGG 0.379764 2.4:-42240107 None:intergenic
CCACTTCTGATTATGTATAA+TGG 0.385042 2.4:-42238692 None:intergenic
GCTGACATAAAGCAGATATA+TGG 0.385390 2.4:+42235811 MS.gene80322:CDS
ACTTGATTGTTTCTAATCCT+TGG 0.387536 2.4:+42237405 MS.gene80322:CDS
AGCAAAGAAAACACACTTTC+AGG 0.390400 2.4:-42238958 None:intergenic
ATGACAAGTGCTGGAAATTC+TGG 0.393370 2.4:+42239683 MS.gene80322:CDS
TTTACATGCTTCCTCACAAC+TGG 0.393777 2.4:-42237885 None:intergenic
ACAGCTGAAAACCCAGCATT+TGG 0.395599 2.4:-42237566 None:intergenic
GAGGAAGCATGTAAATTCAT+TGG 0.395863 2.4:+42237893 MS.gene80322:CDS
GTTCTTAATTCGCTCGCCAT+TGG 0.396110 2.4:+42237748 MS.gene80322:CDS
GTCAGTCTAATGCTTGTTCA+TGG 0.403294 2.4:+42237018 MS.gene80322:CDS
CTTGTCCACATTGCAGTCTT+GGG 0.403552 2.4:+42235749 MS.gene80322:CDS
GGATCTGTATTGAATGATTC+CGG 0.406210 2.4:+42238088 MS.gene80322:CDS
TATAGTCTATCACTGTCATC+AGG 0.408350 2.4:+42240185 MS.gene80322:CDS
TTCTTGGCAGCTTTATCCTC+AGG 0.409894 2.4:-42239430 None:intergenic
AGATCCTCAGTCAAAGGATT+AGG 0.411396 2.4:-42228986 None:intergenic
TTCATGTTGCAGGCTGCTGA+AGG 0.412366 2.4:+42238636 MS.gene80322:CDS
GGTTTGATTAAGCTGATTCT+CGG 0.412424 2.4:+42240053 MS.gene80322:CDS
ATGTTGATCTTTGGAATGAA+TGG 0.413066 2.4:+42239635 MS.gene80322:CDS
CTATCTGAATTGATCACGTT+GGG 0.414492 2.4:+42240380 MS.gene80322:CDS
GGCCCAGAAGCAGCCTTTGA+TGG 0.415156 2.4:+42237124 MS.gene80322:CDS
ATAAGCCTGGTGACGTTAGT+AGG 0.416281 2.4:+42236595 MS.gene80322:CDS
GCATTCAAAACACTTGTTGT+AGG 0.419093 2.4:+42236408 MS.gene80322:CDS
TTTATTGATCAAGCTTACTT+TGG 0.422780 2.4:+42238145 MS.gene80322:CDS
GAATGAATGGGAGAGTTCAT+TGG 0.422978 2.4:+42239648 MS.gene80322:CDS
CCAACGTGATCAATTCAGAT+AGG 0.423386 2.4:-42240379 None:intergenic
GTTGACCTTATCCGGCTTCA+GGG 0.430179 2.4:-42235872 None:intergenic
GCTTCCCGGAACCTGTGAAT+TGG 0.431028 2.4:-42237487 None:intergenic
GACACTGGCCTTCCCAAATC+AGG 0.433616 2.4:+42236203 MS.gene80322:CDS
GGATCTTCCAACACTGCATA+TGG 0.433973 2.4:-42235354 None:intergenic
TGGGTATATAGTTCCTGAAT+GGG 0.434524 2.4:+42235768 MS.gene80322:CDS
TGCTTTATGTCAGCAAGGGT+TGG 0.437214 2.4:-42235802 None:intergenic
CTTAACCTATCTTCTCATGA+TGG 0.437612 2.4:+42236675 MS.gene80322:CDS
GGTACTTGTCTGAATACAAC+TGG 0.439001 2.4:+42239404 MS.gene80322:intron
CGAATTAAGAACGACTTTGA+AGG 0.439260 2.4:-42237737 None:intergenic
TTGGGTATATAGTTCCTGAA+TGG 0.439800 2.4:+42235767 MS.gene80322:CDS
CAATGAGGAGCTGAAGTTGT+TGG 0.439958 2.4:+42238186 MS.gene80322:CDS
TAAAATCTTAAATTCATTGA+AGG 0.442200 2.4:+42238342 MS.gene80322:CDS
CGATTACATTGAATTCTGTC+TGG 0.442862 2.4:-42239191 None:intergenic
GCTTCACTCCCTCATTATAG+TGG 0.448123 2.4:-42235223 None:intergenic
CTTTCTGAACTCATCATCAA+TGG 0.449609 2.4:-42239019 None:intergenic
TCTTTCTTTAATCCAACTGA+TGG 0.451371 2.4:+42239123 MS.gene80322:CDS
AATGAGGAGCTGAAGTTGTT+GGG 0.451772 2.4:+42238187 MS.gene80322:CDS
TGCCTGCAAATGTGAGCAAA+TGG 0.454255 2.4:+42237378 MS.gene80322:CDS
CCTTTGCCTCAATGAAGCTC+AGG 0.457360 2.4:-42240145 None:intergenic
CATAGGGGTAAAAGCTCACC+AGG 0.459073 2.4:+42236234 MS.gene80322:CDS
CGAAGGACAAAGTTCTCTAT+TGG 0.460194 2.4:+42228956 MS.gene80322:CDS
CTTGCCCCTGAAGCCGGATA+AGG 0.460248 2.4:+42235867 MS.gene80322:CDS
AAAAGATGTCCATTTCCTAA+TGG 0.461206 2.4:+42229048 MS.gene80322:CDS
TCCTTTCTTTACCTTTGCCA+TGG 0.464347 2.4:+42239582 MS.gene80322:CDS
GAGAACAGATGTTGAAGAAT+GGG 0.466265 2.4:+42236176 MS.gene80322:CDS
ATACTTGTATGAGCTCCATT+AGG 0.468725 2.4:-42229063 None:intergenic
TTAAACTAGTGACCGTTGAT+TGG 0.468862 2.4:+42236763 MS.gene80322:CDS
TTAGCAATGGATATCAGATA+AGG 0.469431 2.4:+42235713 MS.gene80322:CDS
AGACTATAGTTAACCGTGAC+CGG 0.469581 2.4:-42240170 None:intergenic
CAGGCCAATTCACAGGTTCC+GGG 0.471388 2.4:+42237483 MS.gene80322:CDS
AAGTTGTTGGGAGTGGTAGT+TGG 0.472898 2.4:+42238199 MS.gene80322:CDS
GGAGAACAGATGTTGAAGAA+TGG 0.473141 2.4:+42236175 MS.gene80322:CDS
TTGCGATGCTACTTTCCATC+CGG 0.473242 2.4:-42238107 None:intergenic
GTATGAGCTCCATTAGGAAA+TGG 0.473712 2.4:-42229057 None:intergenic
AGCAAACTACCTGTAACAAC+AGG 0.473796 2.4:+42239763 MS.gene80322:CDS
TGTTCACAAATTTGTCCAAT+GGG 0.474943 2.4:-42238012 None:intergenic
TCAAATGGCGAACTTTCAAT+GGG 0.476870 2.4:-42236480 None:intergenic
AGTAAGCTTGATCAATAAAA+GGG 0.477845 2.4:-42238141 None:intergenic
TGCTTCTCTCTTCAAACAGA+AGG 0.478022 2.4:+42238570 MS.gene80322:CDS
AAATACAGAGAAGAAACTTT+CGG 0.478451 2.4:+42239732 MS.gene80322:CDS
TTAAACAGCAAACACATCTC+TGG 0.478567 2.4:-42239087 None:intergenic
ATCTAGGGAGACAATTCTCT+TGG 0.478692 2.4:+42236332 MS.gene80322:CDS
TGGATGAAAAGCTTGGAACT+TGG 0.478722 2.4:-42240254 None:intergenic
TCATGTTGCAGGCTGCTGAA+GGG 0.479495 2.4:+42238637 MS.gene80322:CDS
TGCTCTGTGTATGTCTCTAT+CGG 0.479706 2.4:-42236561 None:intergenic
CTGTCCACCTTCAGATCCAT+TGG 0.481313 2.4:-42239464 None:intergenic
CATGTTGCAGGCTGCTGAAG+GGG 0.481462 2.4:+42238638 MS.gene80322:CDS
CCAAAATACAGCCCCACGTC+TGG 0.481906 2.4:-42238426 None:intergenic
AATTGTCGCATGACAAGTGC+TGG 0.482123 2.4:+42239674 MS.gene80322:CDS
ACATGATTAAACTTCTCAAA+TGG 0.482821 2.4:-42236495 None:intergenic
TGTAAGAAACAAAAGGACTT+CGG 0.482864 2.4:-42235926 None:intergenic
AGGAGGACTGTATCCATTAA+CGG 0.483012 2.4:-42237717 None:intergenic
GATCCACAAAGAAAGGCAAT+AGG 0.483396 2.4:+42235372 MS.gene80322:CDS
CATTGTCTTGCCCCTGAAGC+CGG 0.483637 2.4:+42235861 MS.gene80322:CDS
GGATGAATTTAAGCATCAAA+AGG 0.484194 2.4:-42237967 None:intergenic
CAAGTACACTTCTTCCTCTC+GGG 0.484531 2.4:-42236652 None:intergenic
TCCTCCCATCATGAGAAGAT+AGG 0.486346 2.4:-42236680 None:intergenic
ATAAAATATGTGGCTTCTGA+TGG 0.487168 2.4:+42236918 MS.gene80322:CDS
TTATATCTCCTCCAAATGCT+GGG 0.488154 2.4:+42237555 MS.gene80322:CDS
CAATTCTCTTGGATAATGAA+TGG 0.488516 2.4:+42236343 MS.gene80322:CDS
TATGCCAGAAAACACGCAAA+AGG 0.489224 2.4:+42237088 MS.gene80322:CDS
CAACTTCTGGATGAAAAGCT+TGG 0.489414 2.4:-42240261 None:intergenic
GGCAAGACAATGGTTGTAGT+TGG 0.490621 2.4:-42235850 None:intergenic
AAGATGACAAAATGGTTCGC+TGG 0.490814 2.4:+42240225 MS.gene80322:CDS
TGTTGATCTTTGGAATGAAT+GGG 0.493934 2.4:+42239636 MS.gene80322:CDS
CCAGAAGTTGGATGAGCCGC+AGG 0.494550 2.4:+42240274 MS.gene80322:CDS
TATTCCATTGATAAAATATG+TGG 0.495033 2.4:+42236908 MS.gene80322:CDS
TGATTGTTTCTAATCCTTGG+AGG 0.495055 2.4:+42237408 MS.gene80322:CDS
TGAAGATATTGAATTTCTGA+TGG 0.495113 2.4:+42240424 MS.gene80322:CDS
ACTTGATACCGGAGCTTGAT+CGG 0.495364 2.4:-42236433 None:intergenic
GTAATGGTGGAGGGATCTGA+AGG 0.495802 2.4:-42238934 None:intergenic
CTGTTCACAAATTTGTCCAA+TGG 0.496699 2.4:-42238013 None:intergenic
GCAAAAGGCTATCTTGAGAT+TGG 0.497240 2.4:+42237103 MS.gene80322:CDS
AATAGGAGCAGTGGTTACAT+AGG 0.497331 2.4:+42235389 MS.gene80322:CDS
TAAAGACATCTGAAGGTCTC+AGG 0.499498 2.4:+42238056 MS.gene80322:CDS
ACAAAATGGTTCGCTGGGAA+AGG 0.500089 2.4:+42240231 MS.gene80322:CDS
GCTGAATGATGGTGTTGAAA+TGG 0.500210 2.4:+42239992 MS.gene80322:CDS
AAAATCTTAAATTCATTGAA+GGG 0.501087 2.4:+42238343 MS.gene80322:CDS
TGTCAAAGAGGCCAAATTTG+AGG 0.501485 2.4:-42238266 None:intergenic
TTAAATTCATCCAATATCTC+AGG 0.501765 2.4:+42237978 MS.gene80322:CDS
TCAATAAAAGGCCCATCAGT+TGG 0.504851 2.4:-42239135 None:intergenic
AGACTATTGTCAAAATATAC+AGG 0.505568 2.4:+42239283 MS.gene80322:CDS
AGTGGTTACATAGGAGAGAA+AGG 0.506839 2.4:+42235398 MS.gene80322:CDS
CAGGAGAAGTCTTCTCCCAT+TGG 0.507963 2.4:+42237997 MS.gene80322:CDS
TCTGATGACATTACTGCTAC+TGG 0.509465 2.4:+42235269 MS.gene80322:CDS
TCATTCAATACAGATCCAAC+AGG 0.510860 2.4:-42238082 None:intergenic
CTCAAGGTGACCTGCAAGCA+AGG 0.511339 2.4:-42239244 None:intergenic
AAGAGGCATGAAGCTGTTCA+AGG 0.512411 2.4:+42240113 MS.gene80322:CDS
TTGTCACTGTCGTCAATGAA+AGG 0.513515 2.4:-42238805 None:intergenic
AAGAGAACTGCATAGGACAT+TGG 0.513715 2.4:-42237198 None:intergenic
AAGCAAAGAGATATTTCTGC+TGG 0.515354 2.4:+42239786 MS.gene80322:CDS
GTCAAAGAGGCCAAATTTGA+GGG 0.516129 2.4:-42238265 None:intergenic
GCAAGTACACTTCTTCCTCT+CGG 0.516457 2.4:-42236653 None:intergenic
CTAAATTCCTCATCTTATGC+AGG 0.516492 2.4:+42237464 MS.gene80322:CDS
AGAAGCAGCCTTTGATGGCA+TGG 0.517710 2.4:+42237129 MS.gene80322:CDS
AAGGAAGAACTGAAGATCCT+TGG 0.519469 2.4:+42238856 MS.gene80322:CDS
GGACAAAATCAAAGCAAAGT+TGG 0.520170 2.4:+42236521 MS.gene80322:CDS
CCTTCAGATGTCTTTAGCCA+AGG 0.520212 2.4:-42238049 None:intergenic
AAATCAGGAGAGGCTTCATA+GGG 0.521464 2.4:+42236218 MS.gene80322:CDS
GCATTTGGAGGAGATATAAG+AGG 0.522118 2.4:-42237551 None:intergenic
CAGAAGCACTTCTATAAGCC+TGG 0.523495 2.4:+42236582 MS.gene80322:CDS
TCTTATGCAGGCCAATTCAC+AGG 0.524166 2.4:+42237476 MS.gene80322:CDS
TGCCACTCGTTGACAACTAT+GGG 0.524270 2.4:+42237324 MS.gene80322:CDS
TTAACCTATCTTCTCATGAT+GGG 0.525256 2.4:+42236676 MS.gene80322:CDS
AGATGACAAAATGGTTCGCT+GGG 0.525856 2.4:+42240226 MS.gene80322:CDS
CATCCACAAGATTAGAACTC+TGG 0.527727 2.4:-42236800 None:intergenic
CATCCAGAGTTCTAATCTTG+TGG 0.527876 2.4:+42236797 MS.gene80322:CDS
TTGAAAATAAGTAATGTGGC+TGG 0.527999 2.4:-42235296 None:intergenic
TGAAGAATGGGTTGTGACAC+TGG 0.528035 2.4:+42236188 MS.gene80322:CDS
TTCTTGAAGATATCTATGAT+AGG 0.529049 2.4:+42239551 MS.gene80322:CDS
TCTGCCTTCCCTTCTGACTG+AGG 0.531085 2.4:+42240494 MS.gene80322:CDS
ATTATTGAAAATAAGTAATG+TGG 0.531522 2.4:-42235300 None:intergenic
AAGAAAATTTGGATTCCCAA+TGG 0.532065 2.4:+42239448 MS.gene80322:CDS
CCTGAGCTTCATTGAGGCAA+AGG 0.532255 2.4:+42240145 MS.gene80322:CDS
TAGAATAAACAAGTATGAAG+AGG 0.532384 2.4:+42237838 MS.gene80322:CDS
AGGACAAAGTTCTCTATTGG+TGG 0.533214 2.4:+42228959 MS.gene80322:CDS
GAACACATTCAAGTATCCCT+TGG 0.535610 2.4:-42236368 None:intergenic
TCAGAAGTGGCTGTATACTA+AGG 0.535657 2.4:+42238705 MS.gene80322:CDS
AATGTATAAAAGATGGCAGC+TGG 0.535839 2.4:+42237684 MS.gene80322:CDS
AGCTCTGACTTCCATGGCAA+AGG 0.536827 2.4:-42239593 None:intergenic
GGAAGCAAAAGTTTCCGGTC+AGG 0.537304 2.4:+42236133 MS.gene80322:CDS
CTTCATTGAGGCAAAGGTCC+CGG 0.537861 2.4:+42240151 MS.gene80322:CDS
TCCATGGCAAAGGTAAAGAA+AGG 0.539229 2.4:-42239583 None:intergenic
TGCATTTCTTCCTACAGAGA+TGG 0.539549 2.4:+42236263 MS.gene80322:CDS
CTTTCTTTAATCCAACTGAT+GGG 0.540609 2.4:+42239124 MS.gene80322:CDS
GAAGGTCTCAGGTCTCCTGT+TGG 0.543070 2.4:+42238067 MS.gene80322:CDS
GAATCCTCAGTCAGAAGGGA+AGG 0.543463 2.4:-42240498 None:intergenic
GAATCTTCCTTGCTGAATGA+TGG 0.544376 2.4:+42239981 MS.gene80322:CDS
AATGAAAATTATGTTGAGCT+CGG 0.545690 2.4:+42237431 MS.gene80322:CDS
AATGAAGTATTTGTCAAAGC+GGG 0.547848 2.4:+42237277 MS.gene80322:CDS
TCATTGATGAGAGCTTCTAT+GGG 0.548178 2.4:+42237813 MS.gene80322:CDS
ATGATTCTTACTTAAAGTGA+AGG 0.551548 2.4:-42237942 None:intergenic
ATGCAGAATCCTCAGTCAGA+AGG 0.553160 2.4:-42240503 None:intergenic
GAATGCACACAGCACTATGC+AGG 0.553612 2.4:+42236966 MS.gene80322:CDS
TGGATTCCCAATGGATCTGA+AGG 0.553737 2.4:+42239457 MS.gene80322:CDS
GTTGGAAGATCCACAAAGAA+AGG 0.555314 2.4:+42235365 MS.gene80322:CDS
TGTCACTGTCGTCAATGAAA+GGG 0.556043 2.4:-42238804 None:intergenic
ATTGAGTCCATATGCAGTGT+TGG 0.556571 2.4:+42235347 MS.gene80322:CDS
CAGTAACTTCTCTAACCGAA+AGG 0.556929 2.4:-42235960 None:intergenic
GGAGCTGAAGTTGTTGGGAG+TGG 0.557326 2.4:+42238192 MS.gene80322:CDS
TTGAGAAGTTTAATCATGTG+AGG 0.557570 2.4:+42236499 MS.gene80322:CDS
TGGATAATGAATGGAACCAA+GGG 0.558227 2.4:+42236352 MS.gene80322:CDS
TGAAGATAACCACTATAATG+AGG 0.558427 2.4:+42235214 MS.gene80322:CDS
CCTATCTGAATTGATCACGT+TGG 0.558706 2.4:+42240379 MS.gene80322:CDS
TATAGTTCCTGAATGGGTTG+AGG 0.559108 2.4:+42235774 MS.gene80322:CDS
GCATTCATAAAGACTGAAAG+AGG 0.559501 2.4:-42236949 None:intergenic
AATTGGTTGAAAACACATGC+TGG 0.559539 2.4:+42239054 MS.gene80322:CDS
AAACACACTTTCAGGAGTAA+TGG 0.560473 2.4:-42238950 None:intergenic
GCAAGGAGCATCCTTTCTCT+AGG 0.560523 2.4:-42239227 None:intergenic
GCTGAAAACCCAGCATTTGG+AGG 0.561529 2.4:-42237563 None:intergenic
TGTCCACCTTCAGATCCATT+GGG 0.561664 2.4:-42239463 None:intergenic
TTTGGCCTCTTTGACAGCTG+AGG 0.564150 2.4:+42238273 MS.gene80322:CDS
TCTCAACCTGAGCTTCATTG+AGG 0.565445 2.4:+42240139 MS.gene80322:CDS
TGAGGCAAAGGTCCCGGTCA+CGG 0.567221 2.4:+42240157 MS.gene80322:CDS
TTTGCAAGCCATGCCATCAA+AGG 0.568640 2.4:-42237137 None:intergenic
GTTATGACAAACTCAAGTGC+TGG 0.568814 2.4:-42235245 None:intergenic
TGTAGGATCCGATCAAGCTC+CGG 0.569219 2.4:+42236425 MS.gene80322:CDS
TCCGGTCAGGTCAGAAAATG+TGG 0.569876 2.4:+42236146 MS.gene80322:CDS
CCAAGACTGCAATGTGGACA+AGG 0.569909 2.4:-42235748 None:intergenic
ATAGTCTATCACTGTCATCA+GGG 0.570016 2.4:+42240186 MS.gene80322:CDS
AAGTGGCTGTATACTAAGGT+TGG 0.571857 2.4:+42238709 MS.gene80322:CDS
TGAGAAGTTTAATCATGTGA+GGG 0.572028 2.4:+42236500 MS.gene80322:CDS
TGATCAAGCTTACTTTGGTG+AGG 0.572342 2.4:+42238150 MS.gene80322:CDS
TTGAAAGCTGCTGTTTAACA+GGG 0.572367 2.4:-42235894 None:intergenic
GGTCAGAAAATGTGGTTGAA+AGG 0.572463 2.4:+42236154 MS.gene80322:CDS
AAATCTGCTTGAATAATGAA+AGG 0.572563 2.4:-42236297 None:intergenic
CGGCTTCAGGGGCAAGACAA+TGG 0.573496 2.4:-42235860 None:intergenic
GGGTTTAGCTCTGACTTCCA+TGG 0.573602 2.4:-42239599 None:intergenic
CAACGTGATCAATTCAGATA+GGG 0.575738 2.4:-42240378 None:intergenic
CAGAGTTCTAATCTTGTGGA+TGG 0.575789 2.4:+42236801 MS.gene80322:CDS
ATAAAGCAGATATATGGTGC+TGG 0.578520 2.4:+42235817 MS.gene80322:CDS
AACAGCCTCAGCTGTCAAAG+AGG 0.580638 2.4:-42238278 None:intergenic
AAATTAGTGACCATCTCTGT+AGG 0.582428 2.4:-42236273 None:intergenic
GCCTGCAAATGTGAGCAAAT+GGG 0.582565 2.4:+42237379 MS.gene80322:CDS
GCAGTTATAGTGTTCTGTGT+GGG 0.585010 2.4:-42235988 None:intergenic
ATTAAAGAAAGAACTCCACT+TGG 0.586157 2.4:-42239112 None:intergenic
CATAGAAGCTCTCATCAATG+AGG 0.586536 2.4:-42237811 None:intergenic
TATTGTTTCAGAGAAATATG+TGG 0.588582 2.4:-42240315 None:intergenic
TGCAGAATCCTCAGTCAGAA+GGG 0.589064 2.4:-42240502 None:intergenic
AGACAATGGTTGTAGTTGGA+AGG 0.589828 2.4:-42235846 None:intergenic
TTTATGATCAATCACAGGAA+GGG 0.590635 2.4:-42238461 None:intergenic
ATAGAAGCTCTCATCAATGA+GGG 0.591136 2.4:-42237810 None:intergenic
GAAGATAACCACTATAATGA+GGG 0.592414 2.4:+42235215 MS.gene80322:CDS
GTCACCACTGACCTAGAGAA+AGG 0.592850 2.4:+42239216 MS.gene80322:CDS
TAGAATTTATGATCAATCAC+AGG 0.594080 2.4:-42238466 None:intergenic
TTCTCTGAAACAATATCAGA+AGG 0.595476 2.4:+42240323 MS.gene80322:CDS
CTGTATTGAATGATTCCGGA+TGG 0.597662 2.4:+42238092 MS.gene80322:CDS
CACACTTTCAGGAGTAATGG+TGG 0.598081 2.4:-42238947 None:intergenic
ATACGAGCCAAACTTGATAC+CGG 0.598781 2.4:-42236444 None:intergenic
AGCAGCCTACTAACGTCACC+AGG 0.599932 2.4:-42236600 None:intergenic
TTGGATAATGAATGGAACCA+AGG 0.600530 2.4:+42236351 MS.gene80322:CDS
GATACTTGAATGTGTTCCAT+CGG 0.601004 2.4:+42236374 MS.gene80322:CDS
CTGGATTGAAACATGGCGTG+AGG 0.601071 2.4:+42238887 MS.gene80322:CDS
GTGATCAATTCAGATAGGGC+AGG 0.601107 2.4:-42240374 None:intergenic
GGAAGAAATGCATAGACCCC+TGG 0.601342 2.4:-42236252 None:intergenic
GGACAAAGTTCTCTATTGGT+GGG 0.601575 2.4:+42228960 MS.gene80322:CDS
ATGGCGAACTTTCAATGGGA+AGG 0.602741 2.4:-42236476 None:intergenic
CCATTATACATAATCAGAAG+TGG 0.603923 2.4:+42238692 MS.gene80322:CDS
ATATCTGCTTTATGTCAGCA+AGG 0.604303 2.4:-42235807 None:intergenic
CCTTGGCTAAAGACATCTGA+AGG 0.605729 2.4:+42238049 MS.gene80322:CDS
TATCTGCTTTATGTCAGCAA+GGG 0.605809 2.4:-42235806 None:intergenic
TACGGCAATACATGAATACA+AGG 0.607899 2.4:+42238837 MS.gene80322:CDS
ATTTATGATCAATCACAGGA+AGG 0.608359 2.4:-42238462 None:intergenic
GAAGATATAGATTTCCACTC+CGG 0.610406 2.4:-42238769 None:intergenic
TGATGAAGATCCTCAGTCAA+AGG 0.610610 2.4:-42228992 None:intergenic
AAGAGTGCAGCTACTACATG+TGG 0.611117 2.4:+42236112 MS.gene80322:CDS
TGGATCTGAAGGTGGACAGT+GGG 0.611646 2.4:+42239468 MS.gene80322:CDS
CGCCCATAGTTGTCAACGAG+TGG 0.614340 2.4:-42237326 None:intergenic
TAATGGTGGAGGGATCTGAA+GGG 0.614670 2.4:-42238933 None:intergenic
GAAGTATTTGTCAAAGCGGG+AGG 0.615263 2.4:+42237280 MS.gene80322:CDS
TTGACCTTATCCGGCTTCAG+GGG 0.615618 2.4:-42235871 None:intergenic
GACTATAGTTAACCGTGACC+GGG 0.616292 2.4:-42240169 None:intergenic
ACCTATCTTCTCATGATGGG+AGG 0.616829 2.4:+42236679 MS.gene80322:CDS
ATTAAGAACGACTTTGAAGG+AGG 0.617792 2.4:-42237734 None:intergenic
ATCAACATAATCATCAAGTG+AGG 0.619346 2.4:-42239620 None:intergenic
AAGAAAGGCAATAGGAGCAG+TGG 0.621388 2.4:+42235380 MS.gene80322:CDS
AAGCCTCTCCTGATTTGGGA+AGG 0.622854 2.4:-42236211 None:intergenic
TTGTCTCCCTAGATGAGGCA+AGG 0.624139 2.4:-42236323 None:intergenic
AATACTTCATTGATAAAGAG+TGG 0.624505 2.4:-42237265 None:intergenic
AGCTGCTTGAAGACTAACAT+GGG 0.627080 2.4:+42238370 MS.gene80322:CDS
TTCAACACCATCATTCAGCA+AGG 0.628441 2.4:-42239988 None:intergenic
AATGCATCCATAAAGGCCGA+TGG 0.628693 2.4:-42236390 None:intergenic
ACTTTCAGGAGTAATGGTGG+AGG 0.632253 2.4:-42238944 None:intergenic
GTTTCTTGTATGACCAGACG+TGG 0.632264 2.4:+42238413 MS.gene80322:CDS
GAATCCTAATCCTTTGACTG+AGG 0.633214 2.4:+42228982 MS.gene80322:CDS
CACTGTCAGAGAGAATCTCA+AGG 0.635671 2.4:-42239260 None:intergenic
ACAGCATCAGAGATGAACCT+TGG 0.639183 2.4:+42238032 MS.gene80322:CDS
TCAACATAATCATCAAGTGA+GGG 0.641694 2.4:-42239619 None:intergenic
ATGGATCTGAAGGTGGACAG+TGG 0.642403 2.4:+42239467 MS.gene80322:CDS
TGAAAATGGAACCAGACAAG+AGG 0.643004 2.4:+42240096 MS.gene80322:CDS
GCATCCTTTCTCTAGGTCAG+TGG 0.646549 2.4:-42239220 None:intergenic
TTTCTTGTATGACCAGACGT+GGG 0.646686 2.4:+42238414 MS.gene80322:CDS
CTTTCAGGAGTAATGGTGGA+GGG 0.646779 2.4:-42238943 None:intergenic
GAGAATTGTCTCCCTAGATG+AGG 0.647287 2.4:-42236328 None:intergenic
AAATTATGTTGAGCTCGGAA+AGG 0.647507 2.4:+42237436 MS.gene80322:CDS
TGGCCTTCCCAAATCAGGAG+AGG 0.648967 2.4:+42236208 MS.gene80322:CDS
AAGCTGCTTGAAGACTAACA+TGG 0.649184 2.4:+42238369 MS.gene80322:CDS
AGCATGTTGAAGAGATACGA+AGG 0.651560 2.4:+42228939 MS.gene80322:CDS
CAGAAGGGAAGGCAGAACTG+AGG 0.652776 2.4:-42240487 None:intergenic
TCATACAAGAAACATTCACT+TGG 0.652808 2.4:-42238403 None:intergenic
CAATGAAGTATTTGTCAAAG+CGG 0.658221 2.4:+42237276 MS.gene80322:CDS
ATTCCCAATGGATCTGAAGG+TGG 0.658324 2.4:+42239460 MS.gene80322:CDS
ATGGCTGATCAATTGGAACA+AGG 0.658523 2.4:+42237037 MS.gene80322:CDS
CAGAGAAGAAACTTTCGGAG+AGG 0.659611 2.4:+42239737 MS.gene80322:CDS
CAGAAGTTGGATGAGCCGCA+GGG 0.662110 2.4:+42240275 MS.gene80322:CDS
GTTTGCTGTTTAATTCCAAG+TGG 0.662733 2.4:+42239097 MS.gene80322:CDS
GCACTTTGCATACCAATCAA+CGG 0.667243 2.4:-42236775 None:intergenic
AACAGCAAACACATCTCTGG+AGG 0.669999 2.4:-42239084 None:intergenic
GTTGTTACTGGATTGAAACA+TGG 0.671297 2.4:+42238880 MS.gene80322:CDS
AGCAGTTATAGTGTTCTGTG+TGG 0.674116 2.4:-42235989 None:intergenic
TTCTTGTATGACCAGACGTG+GGG 0.677245 2.4:+42238415 MS.gene80322:CDS
TAGTCTATCACTGTCATCAG+GGG 0.678681 2.4:+42240187 MS.gene80322:CDS
TGGAGTGATGTCCAGTTGTG+AGG 0.682265 2.4:+42237874 MS.gene80322:CDS
GGAAATATATAGCTACAATG+AGG 0.687228 2.4:+42238171 MS.gene80322:CDS
TGAATACAACTGGAAACCTG+AGG 0.690265 2.4:+42239414 MS.gene80322:CDS
GAGGAGTGCACCTACCAGAG+AGG 0.691243 2.4:+42237654 MS.gene80322:CDS
TAGGGGTAAAAGCTCACCAG+GGG 0.694911 2.4:+42236236 MS.gene80322:CDS
TAGAAGCTCTCATCAATGAG+GGG 0.702345 2.4:-42237809 None:intergenic
CATTGATGAGAGCTTCTATG+GGG 0.703531 2.4:+42237814 MS.gene80322:CDS
CACACTACATCTCTCCGCAG+AGG 0.708853 2.4:+42236071 MS.gene80322:CDS
TATTTCAGTGCATTTCCCTG+CGG 0.710660 2.4:-42240290 None:intergenic
TCAATCCAGTAACAACACCA+AGG 0.725170 2.4:-42238873 None:intergenic
GAATTGGCCTGCATAAGATG+AGG 0.737993 2.4:-42237471 None:intergenic
ATAGGGGTAAAAGCTCACCA+GGG 0.740878 2.4:+42236235 MS.gene80322:CDS
AATCAGGAGAGGCTTCATAG+GGG 0.751305 2.4:+42236219 MS.gene80322:CDS
ATATACCCAAGACTGCAATG+TGG 0.760728 2.4:-42235754 None:intergenic
GTACGATGCATTCTTCAGAG+AGG 0.762566 2.4:-42239492 None:intergenic
ATTCGGAATCTGAAGCACAG+AGG 0.767947 2.4:+42237635 MS.gene80322:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr2.4 gene 42228923 42240514 42228923 ID=MS.gene80322
chr2.4 mRNA 42228923 42240514 42228923 ID=MS.gene80322.t1;Parent=MS.gene80322
chr2.4 exon 42228923 42229081 42228923 ID=MS.gene80322.t1.exon1;Parent=MS.gene80322.t1
chr2.4 CDS 42228923 42229081 42228923 ID=cds.MS.gene80322.t1;Parent=MS.gene80322.t1
chr2.4 exon 42235209 42235419 42235209 ID=MS.gene80322.t1.exon2;Parent=MS.gene80322.t1
chr2.4 CDS 42235209 42235419 42235209 ID=cds.MS.gene80322.t1;Parent=MS.gene80322.t1
chr2.4 exon 42235665 42239304 42235665 ID=MS.gene80322.t1.exon3;Parent=MS.gene80322.t1
chr2.4 CDS 42235665 42239304 42235665 ID=cds.MS.gene80322.t1;Parent=MS.gene80322.t1
chr2.4 exon 42239405 42239876 42239405 ID=MS.gene80322.t1.exon4;Parent=MS.gene80322.t1
chr2.4 CDS 42239405 42239876 42239405 ID=cds.MS.gene80322.t1;Parent=MS.gene80322.t1
chr2.4 exon 42239921 42240514 42239921 ID=MS.gene80322.t1.exon5;Parent=MS.gene80322.t1
chr2.4 CDS 42239921 42240514 42239921 ID=cds.MS.gene80322.t1;Parent=MS.gene80322.t1
Gene Sequence

>MS.gene80322

ATGGCTACACCAAAAGAGCATGTTGAAGAGATACGAAGGACAAAGTTCTCTATTGGTGGGAATCCTAATCCTTTGACTGAGGATCTTCATCACGCTGTTAAGAATCTCTCTGCCGAACTTTATGCAAAAGATGTCCATTTCCTAATGGAGCTCATACAAGTATACTCATTATCTTTCATCCTCTTTTCTTTCTTAGTATAATCTTGCATGCATGCATAAGTATGAATAATATATACGTTTTTAAAATTTATTTTATTCTTTTTGAGTAGGTTCAGTTACGCATACTAAGACCACACTACAAGAAACATTCAAGTTAGCTAGGAAACATTTCCTAGGAATAGAAGCAAAATTCCTAGGTAAGGAGGCTTTCCTAGGAAGTTTCCGAGGAATTACTTCCTAGGTATATTTATAGTTGTGCCTAGGAAATTTCCGAGGAATCACCGAGGAAGTTGTTAGCGAGGACACACCTAGGAAAATTTCCTAGGAAACGTTCCTGCCAAAACTGCCAATTCCTGCCACCACTGTCACAGTTCAGTCGATGTGACAATTAAAAATAAAAAACAAAATTTAAAATTCAATTTAAAATATATTTAAAAATAAATTTCGAAATTCAATTTAAAATATTATTGCGCCAAAAATTTAAAATTTTTAAAATTGCGCCAAAACATTTTTTGAACCAAAGAAATTTGAAAATTTTTGGATATTTAATTATTTGTTTCCTAGGAAATATTCCTCGGAAAACTACTAAAAAATAAAAAAAAAATAGAAAAAATACAAATTTTCCCCTAAAATTATGTTAATTAAATAATAATTTTAAATATTATTTTACATTTCCAATATCCAAATAAACGGCAAATATATTCATCGACGAGAGAGAGTGTAAGACACATCTGCAACTCGCGGAAGAAAGTACAAAAGGGACCGTATATATGCGGCACACCTAAAACCCAAAAACAAGACCCAATCATGATGCAAGAATATACAACATGCCACAACAAGCAAAAACGATGCCGACAATAGCATATCCCTGCATCAAAATCGAACACAAAGGGCCACCAGCCAAAATAGAACCAAAAAACTGCCACTGCAGCATCAACAACAGCCAAAACAGAAGAGCATAAATGCTGCAATATCAAACTGCAGCATTCACATAGTCCACAAAACTAGCCTAAAAGTATCTAAAGCATCATATTTGCCAAAACAGAAGAGCATAAATGCTGCAATTTCAAACTGCAACATTCACATTGTCCACAAAACTAGGCTAAAACTATCTAAAGCATCATATTTAAATAAAGAAGTCAAAATATTCTTCTCATCTGAAGCATCATATTTAATTGGTGTCATCACTTTCATCCTCCTCAATGTTGGGATTGTCCGACTCATCTGAACCATCTTCTTCAACACCCGGTCTCCTTGATGTGCTTGCAATGAATTCCTTAAACCGTCGATCAACGCTTTCTTGAAATGCTCTATATTGCTCAGCGTCCCGTTCCATCTTGTCCTGCAACTCTTGCTCCATTAGCTTACGAGCCTGTAACTCTTGTGTCAATTGTTCTATCCGGGAAATCAAATGAGGCAACGTTTCCTGGTTACTTGAAGAACCTTCTCCAAATGAAGGCTCATTGATTACAGATCCATGCTCCATGAGGGGAGCGTACCGACCAAGACCATACCACTTATGCGTTGTTCCGGGTCCTGATACCTTCCTCCAAAGTTCTAGCTTGATCGCATCAGGCAATTCTTCATAGGTCGAATATTCTCGTGACTCTTCCAAGAATAGTCGTACCTCCTCCCGAAAAGCTACCTGTATACATAAATAATAAATGGAAATTGCTTAATAACTCTTAATTGCAAAACCAAACAGCACAAACAGTCCAAACCAGAACAGCCACACTACACAACAGTATATGCACATTTCTTAAAGAGGTGAAAACTATTTTGAATTTTCACTAGCCATATTTCTCTATGGTTTTATAACTTCATTTGTAAATGACCAAACACCCTGCAAAGATAACATTTAAATTTAAAGTTACTAATTCATTTGAGGCGTGTCGGCGTAATAAATGTGGGTAGCTCTCCCAACCGGGATTCAAATCTTGGTTCACCACATTGTGGAAGTCTAGCACCCTGCGTTAGAGGAGTCGGACCAAACAAAAATGAAAGATGGGAAAATTAAGGAACCAAAGTCTTGGTTGCAAATTACATTCCACAAACTTCACAATGTCATAAGATTTTGGATTACTGTATTAAATATCCACCCTATACAGTTATCAATGCTCAAAGAGACACTTAAAAGCTACTCAAGAACATGTAAGGTTTTGTCATGCACATCTCAGGAGGAAGATTATATGGGGTAACAATTATTGGCCAGCAAGAATAAGGCTTAGCCCACGCTGTGTTATACGCAGTAAATCCATCAGAGCATAATCCAAGTCTCACATTACGTGGATCTTTTGCAAAATCGGGATGTACAGCATCAAAGTGCTGCCATGCCACTCCATCACAAGGATGCCGCATCACCTCTGAATTAGTTTTATTGTAATAATGCCACGTCATATGACCAGCCGTGCGCATTGATGCAAACAATCTCTTCAGTCTTGGTATTATTGGCAGGTAAAACATTGACTTGACTGCGACTCGTTTCTTCTTACGATCAACATCATCCCCGCTCACTTCATACCTTGGTGAATTGCAAAATTTACACTCCTCCAACGCGCCATCATTCTTACCAAATTCATTGTCGTAAAACAACATGCACCCATTAACACAACAATCAATCTTTTTTTCTTCCAATCCCAACTTCATCACTAATCTCTTTGCTTCATAATAACTTAATGGTAAATTTTCTGGTAGAGGAGTCGAATCTCTCATCATTTTCGTGAAGTACTCTGCACAATCTTCGGGTACATTCCAATTTGACTTCCCAGTTAATAGCCTCACACACATGGATAACTTCGACTCAGATGACCCTTCAAACAACGGTTCGTTTACTTTTTTCATCATTGAGTAAAACTTCAACGCCTTCTCGTTCGGGATTATTTCCTCTTCAATGCCCTCATTGTAAGACAGATTCACCCCGAGAGCGTCACCGACCATATCTTCCATCAGACCAAAGTTTTCACACCCTGTATGCGCTCCACTGCTTGAAGCCTGCATATTAACATCAAACTCATCCGGCTCTTGTTCACCATGATGTCTCCACACATAATAATCCTCCATAAAACCAACATCCTCTAAATGTTTTATGACATCTTCTGGGCTCTGAATCAACCTACACGTACATTTAAGACACGGACATCTAATTCCTCCCTCGCTTCTAAAAATATCTTGTGACATGGCGAAAGCAACAAATTCACGAATTCCTTCCTTAAATTGAGCTTTAAGTGTCCTTTTCCCCGGTCTTTTTCTATCATACATCCAACTTCGATGAAGAATATATTGATCCATCTTCTGCATCATTGACATTAATTCAAATTAATTTATATTTTCTATAAGAACATATTTCTTTTTAATTAACAATCTAATTCCTTAGACTATTATTTCTATTCTAATAACAATATCGTTAAAATAACATATTTAGACTATTATTTTTTATACTATTCTATTTTTTCGTTGTCACAATCTAATTAACATATCTCTTTTTTTTTTTTTTTTTCTAATTAACATTGTTACTGACCTACCTTTTAATAATAATAATAATAATAATAATAACAACAACAACAATAACAACAACAACAACAACAACAACAAGGTTATAAATGAGTTTTCAAGTTTAGTCCCTATAAAATTTTAATGATAATTTTACTCCTCCAAAATATTGTAGTTTTCAAGAATAGTCCTTATTTTTGTAAAAAGTTTTTAAAATAAGGATTATTCTTAGAAATTATAAATTTTTGGAGAACTAAAATTATCATTAAAATTTTACAGGGACTAAACTTAAAATATTAATTATTTTTATAGGGACTGATTGTTCTAACAATAAATAAAAAATACTAGAAGAAAAAAAGCACCGGCAAAAATAACTAAAATAATTACTAACCTAACATTATTTTAACTAACTAATATTTTTATCTCTGCTAAAAAAAAAGAATATTTTTATCAATAACTAAGACAACAATTTTACTATCATACATCCAACTTCGATGAAGAATATATTGATCCATCTTCTGCATCATTGATATTAATTCAAATTAATTAATATTTTCTATAAGAACATATTTCTTTTTAATTAACAATCTAATTCCTTAGACTATTATTCTAATTCCTTAGACTATTATTTCTATTCTAATAACAATATCGTTAAAATAACATATTTAGACTATTATTTTTTATACTATTCTATTTTTTCGTTGTCACAATCTAATTAACATATCTCTTTTTTTTTTCTTTCTAATTAACATTGTTACTGACCTACCTTTTAATAATAATAATAATAATAATAATAATAATAATAACAACAATAACAACAACAACAACAAGGTTATAAATGAGTTTTCAAGTTTAGTCCCTATAAAATTTTAATGATAATTTTAGTCCTCCAAAATATTGTAGTTTTCAAGAATAGTCCCTATTTTTGTAAAAAGTTTTTAAAATAAGGATTATTCTTAGAAATTATAAATTTTTGGAGGACTAAAATTATCATTAAAATTTTAGAGGGACTAAACTTAAAATATTAATTATTTTTATAGGCACTAATTGTTCTAACAATAAATAAAAAATACTAGAAGAAAAAAAGCACCGGCAAAAATAACTAAAATAATTACTAACCTAACATTATTTTAACTAACTAATATTTTTATCTCTGCTAAAAAAAAAGAATATTTTTATCAATAACTAAGACAACAATTTTACTTCCTTAAAAAAAACAATTTTACTAACATCTTTTAATAGTTATTAACAAACAGTTTTAATGCCAATCACAACATTTTTTACTAATACTAATAATTTTAAATAAATAAGAAAAACTAACCTCAAATAATATAATTTGATGCTAATGCAGATCGGAAAAGTAGCAGCCAACAGCAAGAACAACAACTTGTAATAGGAAATGAAACCAAATATTAACTGCAAAAAATAATGTAACATATATTTCATTAACATTTTATTTATAAATATAAAAATTGAAATGTTAAAAAAATAGTTACCTTATATGAAAATAAATATGCAAGAGCAATTGTTGAATGGTATAGATAGAAAATAAAATTGAAGTGAGAAGTGTTAAAAATATGGAATGAAAAATATAATAGAGAAGTGTTGAAAGACATGTATATATATACACACAAAAACCCAATTAAATAACCCAATATGGGTTGTTCAACGTCCACCTGCTAAGCAATTGAATATGCCAGCCTTTTTTCACTGTCTCAACGTTAATATATATAGAGTTGTCATGTTACCTTTTCCTGCAAAGGCTGCTGCATTCTGTACCATGTGTTTACCTAGGAAATATTTCCTCGGTAACCACCTAAATTTCCTCGCTAAGCATCATCTAGGTGGTCAAACGGTCAAATATGCTTACCTAGGAAATATTTCCTCGGTAACCACCTCCATTTCCTCGCTAGGCATGGTCAAACAGTCAAATATGCTTACCTAGGAAACTTTCCTCGGTATACACTGACCATAGCTAGGAAGCTGGATTCCTAGGTATAATTCCTAGCTAAATGGATGATTTCTTGTAGTGCCATGCTCGTTCTTCTTTTACATTTGAATACTTTTCATTACTTTTTTTTTGTAAACGTGCATGATTCATAGAGATTTTTCTTTGTTTATATCACTATCATTTTTCCTATATCCAGAATCATGCGATCGTGTTTTTATGAGGGGTTTTATTTCAGCATAAAAATCTAACATCTTATTAAGTCGTATAAAGAAAATATACTATTTAGTGTTTGTTTGGTTTTTCATGATAAAATATAGTTTGAATGCATTCATTTTAGCTAAAAGTGAGTCGAATGTAAAATGAGTAAAAGTGAGTTAACGATAAATTTGTGTTAAAAATTACATTTGGAGTCAAAAGTAACAAATTCTAGCTTCAAGCTATAATCAATTATAGAGTCCAAATCAATTTTAATGGAAAAACATGCAGATATGTCAAAATCAGTTATACACCTCTAAAATTGCTAATGTCTTTGAGAAAGAGAACTAATATAAAAGTCACGGTATATTCCAGCTGTGTACATACTAGGTATTGGACACCAATTTTGTTCTCAAACTCAATAACATTTCTCTTTTCAAATTATAGTAATTGAAATTCATTTGCACAATTTTTGTTTGTCAACTTGAACAGAATGCTGAAGATAACCACTATAATGAGGGAGTGAAGCCAGCACTTGAGTTTGTCATAACTTCTGATGACATTACTGCTACTGGTGCTCCAGCCACATTACTTATTTTCAATAATGAAAAGGGTTTCTCTCCAAAAAACATTGAGTCCATATGCAGTGTTGGAAGATCCACAAAGAAAGGCAATAGGAGCAGTGGTTACATAGGAGAGAAAGGTAAATCACATTCTTATATTTATTTGTTTCTTAAAATGTTGTGTACTTTGGACTCAAGATGGACTTGTGCTAATATGGTTACTTTCGATGACAATTAGTTGAATGTTTTACTTATTTGGTAATCCTTGTTAATCAAGTGATATAAAATTACGCTTGACTGTGAAGTAGGGATATCCATTAAAGTAGCCAAATTGAAGATGATTGTGCAAATCATTGACAAAATCTCTTTAATGGTTGAATTTCAGGAATTGGTTTCAAGAGTGTGTTTCTGGTTACCATGCAGCCGTATATTTTTAGCAATGGATATCAGATAAGGTTCAATGAGAAGCCTTGTCCACATTGCAGTCTTGGGTATATAGTTCCTGAATGGGTTGAGGAGAAGCCAACCCTTGCTGACATAAAGCAGATATATGGTGCTGGTAAAGACCTTCCAACTACAACCATTGTCTTGCCCCTGAAGCCGGATAAGGTCAACCCTGTTAAACAGCAGCTTTCAAGCGTTCATCCCGAAGTCCTTTTGTTTCTTACAAAAATCAGACACCTTTCGGTTAGAGAAGTTACTGAAAATCCCACACAGAACACTATAACTGCTGTATCTATTTCAAGCGAGATTAACTTTGTGACAAGAAAAAATATGAATGCTGAGTCTTACACACTACATCTCTCCGCAGAGGAAAATAGTAATGCTGAGAAAGAGTGCAGCTACTACATGTGGAAGCAAAAGTTTCCGGTCAGGTCAGAAAATGTGGTTGAAAGGAGAACAGATGTTGAAGAATGGGTTGTGACACTGGCCTTCCCAAATCAGGAGAGGCTTCATAGGGGTAAAAGCTCACCAGGGGTCTATGCATTTCTTCCTACAGAGATGGTCACTAATTTTCCTTTCATTATTCAAGCAGATTTTGTCCTTGCCTCATCTAGGGAGACAATTCTCTTGGATAATGAATGGAACCAAGGGATACTTGAATGTGTTCCATCGGCCTTTATGGATGCATTCAAAACACTTGTTGTAGGATCCGATCAAGCTCCGGTATCAAGTTTGGCTCGTATGTTCAAGTTCCTTCCCATTGAAAGTTCGCCATTTGAGAAGTTTAATCATGTGAGGGACAAAATCAAAGCAAAGTTGGTTAATGAAAATATTGTTCCGATAGAGACATACACAGAGCAGAAGCACTTCTATAAGCCTGGTGACGTTAGTAGGCTGCTGTCTGAATTCTGGAATATTTTGAGTAAAGCCCGAGAGGAAGAAGTGTACTTGCTTAACCTATCTTCTCATGATGGGAGGAAGATCTTGAGTTCTTCGTTTGATAAAAGTGAGTATGATAATGTACTCAACTTTTTAGGGGTTAAACTAGTGACCGTTGATTGGTATGCAAAGTGCATCCAGAGTTCTAATCTTGTGGATGGTGTATCAGAAGATCTCTATCTTAAACTTTTACTGTTTGTTGCTAAAAACTGGTCTTCAAGATTTAAGGGAACAAACATTAATAGTATTCCATTGATAAAATATGTGGCTTCTGATGGAACTCTATCCTCTTTCAGTCTTTATGAATGCACACAGCACTATGCAGGTGCGAAGCGAGTAGTAATGACAGACTCAAGTCAGTCTAATGCTTGTTCATGGCTGATCAATTGGAACAAGGAATTTTCATGTGCAGGAAACCGGTTTTTTATGCCAGAAAACACGCAAAAGGCTATCTTGAGATTGGCCCAGAAGCAGCCTTTGATGGCATGGCTTGCAAATGACGTTTCTGTTACTAATTTGAACGTGTACACTTTTGCCAATGTCCTATGCAGTTCTCTTAAAAATAACAGCAAACATGCCATTGCATATGCTCATTTTTTGTACCACTCTTTATCAATGAAGTATTTGTCAAAGCGGGAGGTTGATAGTCTATGTAGTTCTATGCCACTCGTTGACAACTATGGGCGTGTCACAGAAACAAGAAAAAGGGTTCTTGTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCTAATCCTTGGAGGAATGAAAATTATGTTGAGCTCGGAAAGGAGTACCTAAATTCCTCATCTTATGCAGGCCAATTCACAGGTTCCGGGAAGCTTATTAATTTTCTCACAACTCATGTTGGAGCTTCTGACATTCCTCTTATATCTCCTCCAAATGCTGGGTTTTCAGCTGTTGATACACCACTTACCAAAAACAATGCCTTTTTGCTTTTGGATTGGATTCGGAATCTGAAGCACAGAGGAGTGCACCTACCAGAGAGGTTTTTGAAATGTATAAAAGATGGCAGCTGGCTTAAAGTTTCCGTTAATGGATACAGTCCTCCTTCAAAGTCGTTCTTAATTCGCTCGCCATTGGGAAAAATCTTGCAAAGTGGTTCGGTTCTTGTTGATATACCCCTCATTGATGAGAGCTTCTATGGGGATAGAATAAACAAGTATGAAGAGGAGTTGAAAACAATTGGAGTGATGTCCAGTTGTGAGGAAGCATGTAAATTCATTGGAAGAGAACTGATGTCTCGCGCTTCTTCCTTCACTTTAAGTAAGAATCATGTCCTTTTGATGCTTAAATTCATCCAATATCTCAGGAGAAGTCTTCTCCCATTGGACAAATTTGTGAACAGCATCAGAGATGAACCTTGGCTAAAGACATCTGAAGGTCTCAGGTCTCCTGTTGGATCTGTATTGAATGATTCCGGATGGAAAGTAGCATCGCAAATTAGTAACATCCCTTTTATTGATCAAGCTTACTTTGGTGAGGAAATATATAGCTACAATGAGGAGCTGAAGTTGTTGGGAGTGGTAGTTGGCTTAAATAGAAATTACCAAATTGTTATCAAGCACTTAAAATCACCCTCAAATTTGGCCTCTTTGACAGCTGAGGCTGTTCTTTTGATAATGGAATGCATCAAATTCTTGGATGACCCTAGTAAAATCTTAAATTCATTGAAGGGAACAAGCTGCTTGAAGACTAACATGGGTTTCAAAATACCAAGTGAATGTTTCTTGTATGACCAGACGTGGGGCTGTATTTTGGATGTATTCAATGCCCTTCCTGTGATTGATCATAAATTCTATGGAGATAATATTTTCTCTTACAAAAATGAACTGAAAAAAATCGGCGTGGTTGTTGATTTTGGAGATGCTATCAACAGATTTGCTTCTCTCTTCAAACAGAAGGCATCACAAGCTTCATTTAAACAAGAAAATGTCATGTCATTTCTTTCATGTTGCAGGCTGCTGAAGGGGACTGTTTATAGATTTCCTTCTGATTTTTCTACCATTATACATAATCAGAAGTGGCTGTATACTAAGGTTGGTTGTTATGCGTGCCCAAAACAATGCATTTTATATGGTCCGGAGTGGAAATCTATATCTTCAATTACTTGTCTCCCTTTCATTGACGACAGTGACAAATTTTATGGTACGGCAATACATGAATACAAGGAAGAACTGAAGATCCTTGGTGTTGTTACTGGATTGAAACATGGCGTGAGGTTTGTGCCTAAATGTCTTAATTTCCCTTCAGATCCCTCCACCATTACTCCTGAAAGTGTGTTTTCTTTGCTGGAATGCATCCAAAGTTTATATGAAGAGCATAAGCTTTCCATTGATGATGAGTTCAGAAAGAGATTGTCCAGAAATTGGTTGAAAACACATGCTGGTTATAGGCCTCCAGAGATGTGTTTGCTGTTTAATTCCAAGTGGAGTTCTTTCTTTAATCCAACTGATGGGCCTTTTATTGATGCAAATTTTTATGGACGTAAAATAGCATCTTTCCAGACAGAATTCAATGTAATCGGTGTCACCACTGACCTAGAGAAAGGATGCTCCTTGCTTGCAGGTCACCTTGAGATTCTCTCTGACAGTGAGACTATTGTCAAAATATACAGGTACGTCATTTAATCACCCACATGCTGTGTCTCTTTTTGCTTCTTGCTTGCCAGTCACCTTAACTCTCTTTGACTTTGATAATATTGTGAATATACATAGGTACTTGTCTGAATACAACTGGAAACCTGAGGATAAAGCTGCCAAGAAAATTTGGATTCCCAATGGATCTGAAGGTGGACAGTGGGTCCTCTCTGAAGAATGCATCGTACATGACCCTGATAAGCTTTTTGGTTTAAAATTCTATGTTCTTGAAGATATCTATGATAGGAAGCTTTTTCCTTTCTTTACCTTTGCCATGGAAGTCAGAGCTAAACCCTCACTTGATGATTATGTTGATCTTTGGAATGAATGGGAGAGTTCATTGGAAGAATTGTCGCATGACAAGTGCTGGAAATTCTGGATGTTTATCCTGAAACATTTGGGCACAAATACAGAGAAGAAACTTTCGGAGAGGTTGAGCAAACTACCTGTAACAACAGGAAGCAAAGAGATATTTCTGCTGGACAAGAAAGATGTTTTTATACCTGATAACCGTCATCTGAAGAAGCTTTTTGAGCAGGAGAAGATTTTTGTGTGGTATCCTCAGCAGGACTTTGGCCTTCTTCCATTTCTAAGTTATATGACATCTACAGAAAAATTGGTGCTCGAAATATATCTGAATCACTATGCAAAGAAGAATCTTCCTTGCTGAATGATGGTGTTGAAATGGTGCAAGTTGATCATAATGATATTCTTTTCAACTTAAAAGGTTTGATTAAGCTGATTCTCGGCTTTCTTGCTTGTTCTAGCCTGAAAATGGAACCAGACAAGAGGCATGAAGCTGTTCAAGGTCTTCTCAACCTGAGCTTCATTGAGGCAAAGGTCCCGGTCACGGTTAACTATAGTCTATCACTGTCATCAGGGGACATCGTTACAAAGAAAGATGACAAAATGGTTCGCTGGGAAAGGCCAAGTTCCAAGCTTTTCATCCAGAAGTTGGATGAGCCGCAGGGAAATGCACTGAAATATGCCACATATTTCTCTGAAACAATATCAGAAGGTGTTTTGTCTGAGAATCATGATTATGTTCCTGCCCTATCTGAATTGATCACGTTGGGTTTTGTGCTGAAATTCAAGAATGAAGATATTGAATTTCTGATGGAGTCCAAAAACATGCAGATTTTCTGTGAGGACGAGAAGCTCCTCAGTTCTGCCTTCCCTTCTGACTGA
Protein sequence

>MS.gene80322.t1

MATPKEHVEEIRRTKFSIGGNPNPLTEDLHHAVKNLSAELYAKDVHFLMELIQNAEDNHYNEGVKPALEFVITSDDITATGAPATLLIFNNEKGFSPKNIESICSVGRSTKKGNRSSGYIGEKGIGFKSVFLVTMQPYIFSNGYQIRFNEKPCPHCSLGYIVPEWVEEKPTLADIKQIYGAGKDLPTTTIVLPLKPDKVNPVKQQLSSVHPEVLLFLTKIRHLSVREVTENPTQNTITAVSISSEINFVTRKNMNAESYTLHLSAEENSNAEKECSYYMWKQKFPVRSENVVERRTDVEEWVVTLAFPNQERLHRGKSSPGVYAFLPTEMVTNFPFIIQADFVLASSRETILLDNEWNQGILECVPSAFMDAFKTLVVGSDQAPVSSLARMFKFLPIESSPFEKFNHVRDKIKAKLVNENIVPIETYTEQKHFYKPGDVSRLLSEFWNILSKAREEEVYLLNLSSHDGRKILSSSFDKSEYDNVLNFLGVKLVTVDWYAKCIQSSNLVDGVSEDLYLKLLLFVAKNWSSRFKGTNINSIPLIKYVASDGTLSSFSLYECTQHYAGAKRVVMTDSSQSNACSWLINWNKEFSCAGNRFFMPENTQKAILRLAQKQPLMAWLANDVSVTNLNVYTFANVLCSSLKNNSKHAIAYAHFLYHSLSMKYLSKREVDSLCSSMPLVDNYGRVTETRKRVLVPANVSKWADLIVSNPWRNENYVELGKEYLNSSSYAGQFTGSGKLINFLTTHVGASDIPLISPPNAGFSAVDTPLTKNNAFLLLDWIRNLKHRGVHLPERFLKCIKDGSWLKVSVNGYSPPSKSFLIRSPLGKILQSGSVLVDIPLIDESFYGDRINKYEEELKTIGVMSSCEEACKFIGRELMSRASSFTLSKNHVLLMLKFIQYLRRSLLPLDKFVNSIRDEPWLKTSEGLRSPVGSVLNDSGWKVASQISNIPFIDQAYFGEEIYSYNEELKLLGVVVGLNRNYQIVIKHLKSPSNLASLTAEAVLLIMECIKFLDDPSKILNSLKGTSCLKTNMGFKIPSECFLYDQTWGCILDVFNALPVIDHKFYGDNIFSYKNELKKIGVVVDFGDAINRFASLFKQKASQASFKQENVMSFLSCCRLLKGTVYRFPSDFSTIIHNQKWLYTKVGCYACPKQCILYGPEWKSISSITCLPFIDDSDKFYGTAIHEYKEELKILGVVTGLKHGVRFVPKCLNFPSDPSTITPESVFSLLECIQSLYEEHKLSIDDEFRKRLSRNWLKTHAGYRPPEMCLLFNSKWSSFFNPTDGPFIDANFYGRKIASFQTEFNVIGVTTDLEKGCSLLAGHLEILSDSETIVKIYRYLSEYNWKPEDKAAKKIWIPNGSEGGQWVLSEECIVHDPDKLFGLKFYVLEDIYDRKLFPFFTFAMEVRAKPSLDDYVDLWNEWESSLEELSHDKCWKFWMFILKHLGTNTEKKLSERLSKLPVTTGSKEIFLLDKKDVFIPDNRHLKKLFEQEKIFLYDIYRKIGARNISESLCKEESSLLNDGVEMVQVDHNDILFNLKGLIKLILGFLACSSLKMEPDKRHEAVQGLLNLSFIEAKVPVTVNYSLSLSSGDIVTKKDDKMVRWERPSSKLFIQKLDEPQGNALKYATYFSETISEGVLSENHDYVPALSELITLGFVLKFKNEDIEFLMESKNMQIFCEDEKLLSSAFPSD