Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80551.t1 | XP_024641817.1 | 81.9 | 443 | 39 | 3 | 1 | 406 | 1 | 439 | 2.20E-191 | 678.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80551.t1 | B3H5A8 | 40.8 | 341 | 170 | 8 | 22 | 357 | 41 | 354 | 1.0e-51 | 205.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80551.t1 | A0A072UBN0 | 81.8 | 444 | 39 | 3 | 1 | 406 | 1 | 440 | 2.0e-191 | 677.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene80551.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05144 | MS.gene80551 | 0.986932 | 1.81E-168 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80551.t1 | MTR_6g477860 | 81.757 | 444 | 39 | 3 | 1 | 406 | 1 | 440 | 0.0 | 678 |
| MS.gene80551.t1 | MTR_6g477860 | 77.419 | 341 | 35 | 3 | 104 | 406 | 9 | 345 | 1.47e-164 | 466 |
| MS.gene80551.t1 | MTR_3g064500 | 47.479 | 238 | 113 | 4 | 23 | 258 | 23 | 250 | 6.60e-52 | 177 |
| MS.gene80551.t1 | MTR_5g076960 | 56.977 | 172 | 72 | 2 | 35 | 205 | 21 | 191 | 5.61e-45 | 161 |
| MS.gene80551.t1 | MTR_1g067000 | 57.843 | 102 | 35 | 2 | 38 | 139 | 28 | 121 | 3.59e-34 | 129 |
| MS.gene80551.t1 | MTR_8g028655 | 60.638 | 94 | 29 | 2 | 46 | 139 | 53 | 138 | 6.06e-33 | 126 |
| MS.gene80551.t1 | MTR_7g118330 | 68.269 | 104 | 31 | 1 | 38 | 139 | 7 | 110 | 4.05e-32 | 129 |
| MS.gene80551.t1 | MTR_0123s0070 | 54.386 | 114 | 41 | 4 | 46 | 157 | 39 | 143 | 1.09e-31 | 122 |
| MS.gene80551.t1 | MTR_0123s0070 | 54.386 | 114 | 41 | 4 | 46 | 157 | 39 | 143 | 1.37e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80551.t1 | AT1G18330 | 47.510 | 261 | 112 | 5 | 46 | 302 | 39 | 278 | 5.10e-59 | 196 |
| MS.gene80551.t1 | AT1G18330 | 47.510 | 261 | 112 | 5 | 46 | 302 | 65 | 304 | 6.78e-59 | 196 |
| MS.gene80551.t1 | AT5G17300 | 66.250 | 160 | 43 | 3 | 40 | 199 | 38 | 186 | 4.76e-53 | 181 |
| MS.gene80551.t1 | AT3G10113 | 66.667 | 135 | 36 | 1 | 46 | 180 | 54 | 179 | 1.13e-46 | 163 |
| MS.gene80551.t1 | AT5G37260 | 55.233 | 172 | 62 | 3 | 33 | 204 | 12 | 168 | 2.58e-44 | 155 |
| MS.gene80551.t1 | AT3G09600 | 56.863 | 102 | 36 | 2 | 38 | 139 | 24 | 117 | 7.78e-33 | 125 |
| MS.gene80551.t1 | AT3G09600 | 56.863 | 102 | 36 | 2 | 38 | 139 | 24 | 117 | 7.78e-33 | 125 |
| MS.gene80551.t1 | AT3G09600 | 56.863 | 102 | 36 | 2 | 38 | 139 | 24 | 117 | 1.03e-32 | 124 |
| MS.gene80551.t1 | AT3G09600 | 56.863 | 102 | 36 | 2 | 38 | 139 | 24 | 117 | 1.07e-32 | 124 |
| MS.gene80551.t1 | AT3G09600 | 56.863 | 102 | 36 | 2 | 38 | 139 | 24 | 117 | 1.07e-32 | 124 |
| MS.gene80551.t1 | AT5G52660 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 5.78e-32 | 124 |
| MS.gene80551.t1 | AT5G52660 | 59.184 | 98 | 32 | 2 | 42 | 139 | 57 | 146 | 5.85e-32 | 124 |
| MS.gene80551.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 3.66e-31 | 120 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 3.89e-31 | 125 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 4.10e-31 | 125 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 4.10e-31 | 125 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 4.10e-31 | 125 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 4.10e-31 | 125 |
| MS.gene80551.t1 | AT1G01060 | 58.491 | 106 | 42 | 1 | 35 | 138 | 2 | 107 | 4.10e-31 | 125 |
| MS.gene80551.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 4.24e-31 | 119 |
| MS.gene80551.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 4.24e-31 | 119 |
| MS.gene80551.t1 | AT1G01520 | 59.574 | 94 | 30 | 2 | 46 | 139 | 50 | 135 | 4.54e-31 | 120 |
| MS.gene80551.t1 | AT5G02840 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 8.50e-31 | 119 |
| MS.gene80551.t1 | AT4G01280 | 60.638 | 94 | 29 | 2 | 46 | 139 | 48 | 133 | 1.04e-30 | 120 |
| MS.gene80551.t1 | AT5G02840 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 1.11e-30 | 119 |
| MS.gene80551.t1 | AT5G02840 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 1.11e-30 | 119 |
| MS.gene80551.t1 | AT2G46830 | 63.529 | 85 | 31 | 0 | 38 | 122 | 5 | 89 | 1.14e-30 | 124 |
| MS.gene80551.t1 | AT5G02840 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 1.15e-30 | 119 |
| MS.gene80551.t1 | AT5G02840 | 58.511 | 94 | 31 | 2 | 46 | 139 | 37 | 122 | 1.67e-30 | 119 |
| MS.gene80551.t1 | AT4G01280 | 36.652 | 221 | 96 | 6 | 46 | 266 | 48 | 224 | 5.82e-30 | 117 |
| MS.gene80551.t1 | AT5G17300 | 59.322 | 118 | 37 | 3 | 82 | 199 | 5 | 111 | 3.87e-22 | 96.3 |
| MS.gene80551.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 6.46e-15 | 74.3 |
| MS.gene80551.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 6.46e-15 | 74.3 |
| MS.gene80551.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 9.03e-15 | 73.6 |
| MS.gene80551.t1 | AT3G09600 | 50.769 | 65 | 24 | 2 | 75 | 139 | 5 | 61 | 9.03e-15 | 73.6 |
Find 110 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAGGCTTTGAAACTTTA+TGG | 0.148316 | 6.4:+51244443 | MS.gene80551:CDS |
| CTCTTCCTCCTCAGATGGTT+TGG | 0.248334 | 6.4:-51245177 | None:intergenic |
| TCGAATCTGAACTGCAGTTT+TGG | 0.267753 | 6.4:-51244597 | None:intergenic |
| CCTCAGATGGTTTGGATGTC+TGG | 0.272930 | 6.4:-51245169 | None:intergenic |
| TTCTTAATCCTGTGCCTCTT+AGG | 0.290915 | 6.4:+51246015 | MS.gene80551:CDS |
| CTTTGTTTAGTGATGGTATA+CGG | 0.298682 | 6.4:-51244386 | None:intergenic |
| GGAGATGTTTCTGATTCATT+TGG | 0.303011 | 6.4:-51244960 | None:intergenic |
| ATCTCGGTGGTGCAAGAATT+TGG | 0.321806 | 6.4:-51245104 | None:intergenic |
| CACTGAATCAGTCTGCGATA+TGG | 0.346626 | 6.4:+51246091 | MS.gene80551:CDS |
| ACCCTCTTCCAGATTTCTTA+AGG | 0.359010 | 6.4:-51246186 | None:intergenic |
| AATCTTCATGCAGAACATAT+AGG | 0.364568 | 6.4:+51244572 | MS.gene80551:intron |
| GCCTCTTAGGCCTTGTTTGA+AGG | 0.370068 | 6.4:+51246028 | MS.gene80551:CDS |
| GGAGTTGTCCTTAAGAAATC+TGG | 0.375864 | 6.4:+51246178 | MS.gene80551:CDS |
| GTTGCGCACTCGCCGACATA+TGG | 0.378386 | 6.4:-51245927 | None:intergenic |
| GAGATGTTTCTGATTCATTT+GGG | 0.381108 | 6.4:-51244959 | None:intergenic |
| GCACTTGGTTCGGAAGCATT+TGG | 0.382637 | 6.4:+51245041 | MS.gene80551:CDS |
| AGCTATCAACTCTAATGAAA+TGG | 0.384116 | 6.4:+51245785 | MS.gene80551:CDS |
| TTCAGACTGTGATCCACCTT+TGG | 0.402680 | 6.4:-51243991 | None:intergenic |
| GGTATGTCAATTGGCTGAAT+AGG | 0.403494 | 6.4:-51244861 | None:intergenic |
| GGATGAAGGGGTTTCCTCTT+CGG | 0.405395 | 6.4:-51244894 | None:intergenic |
| TCACTAAACAAAGGGAGAAA+TGG | 0.418116 | 6.4:+51244396 | MS.gene80551:CDS |
| GGCACTAAGTCAACTGGAAC+AGG | 0.425108 | 6.4:+51243954 | MS.gene80551:CDS |
| CCTTTCTCTTCCTCCTCAGA+TGG | 0.426336 | 6.4:-51245182 | None:intergenic |
| ATCTTCATGCAGAACATATA+GGG | 0.428042 | 6.4:+51244573 | MS.gene80551:intron |
| CAGCTTGTCGCCTGTTGAAA+AGG | 0.429297 | 6.4:+51245136 | MS.gene80551:CDS |
| CTCAAACTCAAAACATCGTC+AGG | 0.429480 | 6.4:+51246153 | MS.gene80551:CDS |
| TTCCTCTTCGGCCGAGGAGG+AGG | 0.434146 | 6.4:-51244882 | None:intergenic |
| TGAATGTAGAATCAAGTTCA+AGG | 0.436192 | 6.4:+51243933 | MS.gene80551:intron |
| GGACTTTCAGCACTGCCATC+AGG | 0.443949 | 6.4:-51244840 | None:intergenic |
| TGTACTGTCTGCACTTGGTT+CGG | 0.453033 | 6.4:+51245031 | MS.gene80551:CDS |
| TCAACTGATTTGCGAGGGTA+TGG | 0.453549 | 6.4:-51244915 | None:intergenic |
| GTTCAAGGCACTAAGTCAAC+TGG | 0.454976 | 6.4:+51243948 | MS.gene80551:CDS |
| TTTCTCCCTTTGTTTAGTGA+TGG | 0.457327 | 6.4:-51244393 | None:intergenic |
| CGAGGAGGAGGTATGTCAAT+TGG | 0.460852 | 6.4:-51244870 | None:intergenic |
| TGAAACTTTATGGCCGTGGC+TGG | 0.464106 | 6.4:+51244453 | MS.gene80551:CDS |
| ACCTCTGTACTGTCTGCACT+TGG | 0.467315 | 6.4:+51245026 | MS.gene80551:CDS |
| TGGATGATCTTGAGAAGGTT+GGG | 0.471398 | 6.4:+51245805 | MS.gene80551:CDS |
| ATGCTCACTTGAGCTCCATC+AGG | 0.474418 | 6.4:-51245882 | None:intergenic |
| CGGAAACAACCTTGCTCCCA+AGG | 0.482656 | 6.4:+51244046 | MS.gene80551:CDS |
| ACCTTCAAACAAGGCCTAAG+AGG | 0.484525 | 6.4:-51246029 | None:intergenic |
| GGTGGAAAGCTGGAAGGCCT+TGG | 0.485291 | 6.4:-51245971 | None:intergenic |
| ATTTGCGAGGGTATGGATGA+AGG | 0.487003 | 6.4:-51244908 | None:intergenic |
| CTCTGCAACTGACAGGTTAG+TGG | 0.488691 | 6.4:-51244985 | None:intergenic |
| CAGTACAGAGGTAGGCGATT+GGG | 0.490395 | 6.4:-51245015 | None:intergenic |
| TACTTGGTTGCAGGTTGTGC+GGG | 0.493357 | 6.4:+51244815 | MS.gene80551:intron |
| AGGGGTTTCCTCTTCGGCCG+AGG | 0.499231 | 6.4:-51244888 | None:intergenic |
| CATGGCATGAGGTGGAAAGC+TGG | 0.502566 | 6.4:-51245981 | None:intergenic |
| CGTGGCTGGCGTCAAATTGA+AGG | 0.507871 | 6.4:+51244467 | MS.gene80551:CDS |
| CAAGCTGACCGGGTGAATCT+CGG | 0.508422 | 6.4:-51245120 | None:intergenic |
| ATTTGCTACAATGGAGACTA+AGG | 0.515528 | 6.4:+51242641 | None:intergenic |
| TATCATACCATGGACATAAG+TGG | 0.516937 | 6.4:-51245242 | None:intergenic |
| CAACAGGCGACAAGCTGACC+GGG | 0.523649 | 6.4:-51245130 | None:intergenic |
| CCATCTGAGGAGGAAGAGAA+AGG | 0.527813 | 6.4:+51245182 | MS.gene80551:CDS |
| TCAACAGGCGACAAGCTGAC+CGG | 0.528816 | 6.4:-51245131 | None:intergenic |
| TGTCGTTCTCTGCAACTGAC+AGG | 0.529046 | 6.4:-51244992 | None:intergenic |
| TTAAGAATTTGATGATTGCA+TGG | 0.529235 | 6.4:-51245999 | None:intergenic |
| ATGGATGATCTTGAGAAGGT+TGG | 0.536503 | 6.4:+51245804 | MS.gene80551:CDS |
| CTCAAAACCACTTATGTCCA+TGG | 0.537292 | 6.4:+51245235 | MS.gene80551:CDS |
| GCTTTGAAACTTTATGGCCG+TGG | 0.537498 | 6.4:+51244449 | MS.gene80551:CDS |
| GCAAGGTTGTTTCCGACAGA+AGG | 0.537798 | 6.4:-51244038 | None:intergenic |
| TTGCGAGGGTATGGATGAAG+GGG | 0.537852 | 6.4:-51244906 | None:intergenic |
| TTTGCGAGGGTATGGATGAA+GGG | 0.538270 | 6.4:-51244907 | None:intergenic |
| GTCCTTAAGAAATCTGGAAG+AGG | 0.539236 | 6.4:+51246184 | MS.gene80551:CDS |
| GTATACCATCACTAAACAAA+GGG | 0.540490 | 6.4:+51244388 | MS.gene80551:CDS |
| GTAAAACAACCTTGGGAGCA+AGG | 0.542630 | 6.4:-51244055 | None:intergenic |
| CTACTTGGTTGCAGGTTGTG+CGG | 0.547281 | 6.4:+51244814 | MS.gene80551:intron |
| GAGGAGGAAAGTTCTTGCAC+TGG | 0.548593 | 6.4:+51246062 | MS.gene80551:CDS |
| TTTGAAGGTAATAGCAAGAG+AGG | 0.549454 | 6.4:+51246043 | MS.gene80551:CDS |
| AAACAAGGCCTAAGAGGCAC+AGG | 0.552171 | 6.4:-51246023 | None:intergenic |
| CTAGGCATGTGTACACCTGA+TGG | 0.552985 | 6.4:+51245867 | MS.gene80551:CDS |
| GGTTTCCTCTTCGGCCGAGG+AGG | 0.557391 | 6.4:-51244885 | None:intergenic |
| AAATCAGTTGACTCTTTCAA+AGG | 0.561001 | 6.4:+51244927 | MS.gene80551:CDS |
| TCCTTAAGAAATCTGGAAGA+GGG | 0.563781 | 6.4:+51246185 | MS.gene80551:CDS |
| TGAAAATGATGCGAAGTCGC+AGG | 0.563849 | 6.4:+51244010 | MS.gene80551:CDS |
| ACAGTACAGAGGTAGGCGAT+TGG | 0.570674 | 6.4:-51245016 | None:intergenic |
| CTTCAATTTGACGCCAGCCA+CGG | 0.571186 | 6.4:-51244466 | None:intergenic |
| TACCTCCTCCTCGGCCGAAG+AGG | 0.581749 | 6.4:+51244880 | MS.gene80551:CDS |
| CGTATACCATCACTAAACAA+AGG | 0.584691 | 6.4:+51244387 | MS.gene80551:CDS |
| TGGAGCTCAAGTGAGCATCA+TGG | 0.586943 | 6.4:+51245887 | MS.gene80551:CDS |
| GGGTTCTCAGAAGTCAATGA+AGG | 0.589070 | 6.4:+51245737 | MS.gene80551:intron |
| AACTCAAAACATCGTCAGGA+AGG | 0.592269 | 6.4:+51246157 | MS.gene80551:CDS |
| CCAGACATCCAAACCATCTG+AGG | 0.593425 | 6.4:+51245169 | MS.gene80551:CDS |
| ACTGTGATCCACCTTTGGAA+TGG | 0.594883 | 6.4:-51243986 | None:intergenic |
| CAGGTTGTGCGGGAACCTGA+TGG | 0.598426 | 6.4:+51244825 | MS.gene80551:intron |
| TTGCACCACCGAGATTCACC+CGG | 0.599354 | 6.4:+51245112 | MS.gene80551:CDS |
| AGTGCGCAACTTTACCATTG+TGG | 0.600355 | 6.4:+51245940 | MS.gene80551:CDS |
| CTTGATACAGAATTATCACT+AGG | 0.603577 | 6.4:+51245849 | MS.gene80551:CDS |
| CTTGCTATTACCTTCAAACA+AGG | 0.605820 | 6.4:-51246038 | None:intergenic |
| AGTAAGTGCCATTCCAAAGG+TGG | 0.606494 | 6.4:+51243978 | MS.gene80551:CDS |
| GAGCATCATGGAACAACAGA+AGG | 0.607887 | 6.4:+51245899 | MS.gene80551:CDS |
| GCAACTGACAGGTTAGTGGA+TGG | 0.608909 | 6.4:-51244981 | None:intergenic |
| GAAGGTAATAGCAAGAGAGG+AGG | 0.609367 | 6.4:+51246046 | MS.gene80551:CDS |
| GCATGAGGTGGAAAGCTGGA+AGG | 0.615795 | 6.4:-51245977 | None:intergenic |
| CATAAAGTTTCAAAGCCTCA+AGG | 0.622366 | 6.4:-51244442 | None:intergenic |
| GATGATTGCATGGCATGAGG+TGG | 0.625757 | 6.4:-51245989 | None:intergenic |
| AAGAGTCAACTGATTTGCGA+GGG | 0.626425 | 6.4:-51244920 | None:intergenic |
| GGTAGTAAGTGCCATTCCAA+AGG | 0.631426 | 6.4:+51243975 | MS.gene80551:CDS |
| TCGCAGGATATACCTTCTGT+CGG | 0.637342 | 6.4:+51244026 | MS.gene80551:CDS |
| AGTGCAGACAGTACAGAGGT+AGG | 0.637534 | 6.4:-51245023 | None:intergenic |
| AAAGAGTCAACTGATTTGCG+AGG | 0.637562 | 6.4:-51244921 | None:intergenic |
| GACATCCAAACCATCTGAGG+AGG | 0.638275 | 6.4:+51245172 | MS.gene80551:CDS |
| CAGAAGGAGAATCCATATGT+CGG | 0.647729 | 6.4:+51245915 | MS.gene80551:CDS |
| CAATTGACATACCTCCTCCT+CGG | 0.655187 | 6.4:+51244871 | MS.gene80551:CDS |
| TGAAATGGATGATCTTGAGA+AGG | 0.659901 | 6.4:+51245800 | MS.gene80551:CDS |
| TTTGATGATTGCATGGCATG+AGG | 0.660991 | 6.4:-51245992 | None:intergenic |
| ACCAAGTGCAGACAGTACAG+AGG | 0.666189 | 6.4:-51245027 | None:intergenic |
| CCATTGTGGAGTTTGTACCA+AGG | 0.677183 | 6.4:+51245954 | MS.gene80551:CDS |
| AGAGCATCAAAAGTTCCTTG+AGG | 0.696601 | 6.4:+51244427 | MS.gene80551:CDS |
| CCTTGGTACAAACTCCACAA+TGG | 0.705024 | 6.4:-51245954 | None:intergenic |
| GCTGACCGGGTGAATCTCGG+TGG | 0.721988 | 6.4:-51245117 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTTCTTTACTAAATT+TGG | + | chr6.4:51244490-51244509 | MS.gene80551:intron | 10.0% |
| !! | TAAAAAAGTTCTATAGAAAA+TGG | + | chr6.4:51243073-51243092 | MS.gene80551:intron | 15.0% |
| !! | TAAGATCAAAATCATAAAAA+GGG | - | chr6.4:51242709-51242728 | None:intergenic | 15.0% |
| !! | TTAAGATCAAAATCATAAAA+AGG | - | chr6.4:51242710-51242729 | None:intergenic | 15.0% |
| !!! | ATAAAAAGGGTATTAAAAAA+AGG | - | chr6.4:51242696-51242715 | None:intergenic | 15.0% |
| !!! | ATTTTTGTTTGTACTTTTTA+AGG | + | chr6.4:51242983-51243002 | MS.gene80551:intron | 15.0% |
| !!! | TAATCAAATAATCTTTTTTC+AGG | - | chr6.4:51242872-51242891 | None:intergenic | 15.0% |
| !!! | TCTATAAATTAACCTTATTT+AGG | - | chr6.4:51243411-51243430 | None:intergenic | 15.0% |
| !!! | TCTGAAATAATAAATTGATA+TGG | + | chr6.4:51243132-51243151 | MS.gene80551:intron | 15.0% |
| !! | AGATAATTTCAAAACTAGTA+AGG | - | chr6.4:51245600-51245619 | None:intergenic | 20.0% |
| !! | ATTTGATTATATATGAGACT+AGG | + | chr6.4:51242883-51242902 | MS.gene80551:intron | 20.0% |
| !! | TGAAAATTGAAATAAGTTTC+AGG | - | chr6.4:51244353-51244372 | None:intergenic | 20.0% |
| !! | TTTGATTATATATGAGACTA+GGG | + | chr6.4:51242884-51242903 | MS.gene80551:intron | 20.0% |
| !!! | AAATTCTTTGATTTAGCTTA+TGG | + | chr6.4:51245274-51245293 | MS.gene80551:intron | 20.0% |
| !!! | AACTTATTTCAATTTTCAAC+AGG | + | chr6.4:51244355-51244374 | MS.gene80551:intron | 20.0% |
| !!! | AATAATTTATGACACTGTTT+TGG | + | chr6.4:51245369-51245388 | MS.gene80551:intron | 20.0% |
| !!! | GATTTTTAATTGGACTTTAA+AGG | + | chr6.4:51244711-51244730 | MS.gene80551:intron | 20.0% |
| !!! | TAGTTGAGTCATAATTTTAT+CGG | + | chr6.4:51243155-51243174 | MS.gene80551:intron | 20.0% |
| !!! | TCAATTTTTTGTTATCGAAA+CGG | + | chr6.4:51243887-51243906 | MS.gene80551:intron | 20.0% |
| !!! | TGCATTTTCTTTAAAAAGTA+AGG | + | chr6.4:51242733-51242752 | MS.gene80551:intron | 20.0% |
| !!! | TGTAGATTTGGATTTTTAAT+TGG | + | chr6.4:51244701-51244720 | MS.gene80551:intron | 20.0% |
| ! | AAACCAAAAGATAAAGACAA+GGG | - | chr6.4:51243868-51243887 | None:intergenic | 25.0% |
| ! | AAGTTCTATAGAAAATGGAT+TGG | + | chr6.4:51243078-51243097 | MS.gene80551:intron | 25.0% |
| ! | CATATTTGAGCTTATTTACT+AGG | + | chr6.4:51245344-51245363 | MS.gene80551:intron | 25.0% |
| ! | GAAGGTTATAAATGTAGATT+TGG | + | chr6.4:51244689-51244708 | MS.gene80551:intron | 25.0% |
| ! | GATTAAATAACTGATGTATC+TGG | + | chr6.4:51242807-51242826 | MS.gene80551:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | + | chr6.4:51244218-51244237 | MS.gene80551:intron | 25.0% |
| ! | TCAAATATGCTAATTCATAC+AGG | - | chr6.4:51245333-51245352 | None:intergenic | 25.0% |
| ! | TTATATCTAACTAGAAGACA+TGG | - | chr6.4:51244543-51244562 | None:intergenic | 25.0% |
| !! | CTCAACAAAAATATCTTTTC+AGG | + | chr6.4:51242778-51242797 | MS.gene80551:intron | 25.0% |
| !! | TTAAGAATTTGATGATTGCA+TGG | - | chr6.4:51246002-51246021 | None:intergenic | 25.0% |
| !! | TTAATTGGACTTTAAAGGAA+AGG | + | chr6.4:51244716-51244735 | MS.gene80551:intron | 25.0% |
| !!! | TAGAGTATTTTAGTTCCATA+GGG | + | chr6.4:51243046-51243065 | MS.gene80551:intron | 25.0% |
| AAAAGAGGAAAAAAAGTCTC+CGG | - | chr6.4:51243739-51243758 | None:intergenic | 30.0% | |
| AAAAGATAAAGACAAGGGAT+TGG | - | chr6.4:51243863-51243882 | None:intergenic | 30.0% | |
| AAAGATAAAGACAAGGGATT+GGG | - | chr6.4:51243862-51243881 | None:intergenic | 30.0% | |
| AATCTTCATGCAGAACATAT+AGG | + | chr6.4:51244572-51244591 | MS.gene80551:intron | 30.0% | |
| ACATGAAATCATCTAGACTT+TGG | + | chr6.4:51243219-51243238 | MS.gene80551:intron | 30.0% | |
| AGCTATCAACTCTAATGAAA+TGG | + | chr6.4:51245785-51245804 | MS.gene80551:CDS | 30.0% | |
| AGCTTAATACTAGTGATTTG+TGG | - | chr6.4:51245696-51245715 | None:intergenic | 30.0% | |
| ATCACTAGTATTAAGCTGTT+TGG | + | chr6.4:51245699-51245718 | MS.gene80551:intron | 30.0% | |
| ATCTTCATGCAGAACATATA+GGG | + | chr6.4:51244573-51244592 | MS.gene80551:intron | 30.0% | |
| ATTTCAAAACTAGTAAGGCA+TGG | - | chr6.4:51245595-51245614 | None:intergenic | 30.0% | |
| CCAAGTAGATATTAAGATCA+TGG | - | chr6.4:51244802-51244821 | None:intergenic | 30.0% | |
| CCATGATCTTAATATCTACT+TGG | + | chr6.4:51244799-51244818 | MS.gene80551:intron | 30.0% | |
| CTTGATACAGAATTATCACT+AGG | + | chr6.4:51245849-51245868 | MS.gene80551:CDS | 30.0% | |
| GAAACCAAAAGATAAAGACA+AGG | - | chr6.4:51243869-51243888 | None:intergenic | 30.0% | |
| GTATACCATCACTAAACAAA+GGG | + | chr6.4:51244388-51244407 | MS.gene80551:CDS | 30.0% | |
| GTGTTGTCAATAGCAAATTA+CGG | - | chr6.4:51244299-51244318 | None:intergenic | 30.0% | |
| GTTAGTATGTGAGATTTGAA+CGG | + | chr6.4:51243626-51243645 | MS.gene80551:intron | 30.0% | |
| GTTCAATTGTTTGAATCTTC+TGG | + | chr6.4:51243266-51243285 | MS.gene80551:intron | 30.0% | |
| GTTGAAAGTAAAACAACCTT+GGG | - | chr6.4:51244065-51244084 | None:intergenic | 30.0% | |
| TAATTATTGCTCGCAAATGA+AGG | + | chr6.4:51244671-51244690 | MS.gene80551:intron | 30.0% | |
| TACATGAAAACTATCAACTG+AGG | - | chr6.4:51243533-51243552 | None:intergenic | 30.0% | |
| TGAATGTAGAATCAAGTTCA+AGG | + | chr6.4:51243933-51243952 | MS.gene80551:intron | 30.0% | |
| TGTTGAAAGTAAAACAACCT+TGG | - | chr6.4:51244066-51244085 | None:intergenic | 30.0% | |
| TTAGTATGTGAGATTTGAAC+GGG | + | chr6.4:51243627-51243646 | MS.gene80551:intron | 30.0% | |
| TTCCTCAGAAGAAATAATCT+CGG | - | chr6.4:51245640-51245659 | None:intergenic | 30.0% | |
| TTGTCAAATAGTGGCTATAA+CGG | + | chr6.4:51244227-51244246 | MS.gene80551:intron | 30.0% | |
| ! | AAATCAGTTGACTCTTTCAA+AGG | + | chr6.4:51244927-51244946 | MS.gene80551:CDS | 30.0% |
| ! | AATCCCTTGTCTTTATCTTT+TGG | + | chr6.4:51243862-51243881 | MS.gene80551:intron | 30.0% |
| ! | ATTGTTTGAATCTTCTGGTT+CGG | + | chr6.4:51243271-51243290 | MS.gene80551:intron | 30.0% |
| ! | ATTTCAATTTTCAACAGGTC+AGG | + | chr6.4:51244360-51244379 | MS.gene80551:intron | 30.0% |
| ! | CCTCTTTTCATAGTAAAAGA+GGG | + | chr6.4:51243751-51243770 | MS.gene80551:intron | 30.0% |
| ! | CTGAAGTATCACTGAATATT+TGG | + | chr6.4:51243579-51243598 | MS.gene80551:intron | 30.0% |
| ! | CTTTGTTTAGTGATGGTATA+CGG | - | chr6.4:51244389-51244408 | None:intergenic | 30.0% |
| ! | GACTCATGCAAAAGATTTTA+GGG | + | chr6.4:51245307-51245326 | MS.gene80551:intron | 30.0% |
| ! | GAGATGTTTCTGATTCATTT+GGG | - | chr6.4:51244962-51244981 | None:intergenic | 30.0% |
| ! | TAGAGAAAAACTTTTGAGCA+TGG | - | chr6.4:51244625-51244644 | None:intergenic | 30.0% |
| ! | TCCTCTTTTCATAGTAAAAG+AGG | + | chr6.4:51243750-51243769 | MS.gene80551:intron | 30.0% |
| ! | TGATTTAGCTTATGGTTCAT+AGG | + | chr6.4:51245282-51245301 | MS.gene80551:intron | 30.0% |
| ! | TGCTCAAAAGTTTTTCTCTA+AGG | + | chr6.4:51244625-51244644 | MS.gene80551:CDS | 30.0% |
| !!! | CTAGAGTATTTTAGTTCCAT+AGG | + | chr6.4:51243045-51243064 | MS.gene80551:intron | 30.0% |
| !!! | GTTTTGAGTTTGAGAATCAT+CGG | - | chr6.4:51246147-51246166 | None:intergenic | 30.0% |
| !!! | TGGTTCGGATTTTAAAACAT+TGG | + | chr6.4:51243335-51243354 | MS.gene80551:intron | 30.0% |
| !!! | TGGTTCGGTTTTTAAAACAT+CGG | - | chr6.4:51243305-51243286 | None:intergenic | 30.0% |
| !!! | TGGTTCGGTTTTTAAAACAT+TGG | + | chr6.4:51243286-51243305 | MS.gene80551:intron | 30.0% |
| AAAACTAGTAAGGCATGGTT+TGG | - | chr6.4:51245590-51245609 | None:intergenic | 35.0% | |
| AAAATACCGCTATAGCATAG+TGG | + | chr6.4:51244158-51244177 | MS.gene80551:intron | 35.0% | |
| AATTGTTGCATCATCTGGTT+CGG | + | chr6.4:51243320-51243339 | MS.gene80551:intron | 35.0% | |
| AGATGATTTCATGTCTGGTT+CGG | - | chr6.4:51243213-51243232 | None:intergenic | 35.0% | |
| AGTCTAGATGATTTCATGTC+TGG | - | chr6.4:51243218-51243237 | None:intergenic | 35.0% | |
| ATATATGAGACTAGGGAGTA+GGG | + | chr6.4:51242891-51242910 | MS.gene80551:intron | 35.0% | |
| ATGTATCTGGTCGTCTATAA+CGG | + | chr6.4:51242820-51242839 | MS.gene80551:intron | 35.0% | |
| CAAATTCCACTATGCTATAG+CGG | - | chr6.4:51244167-51244186 | None:intergenic | 35.0% | |
| CATAAAGTTTCAAAGCCTCA+AGG | - | chr6.4:51244445-51244464 | None:intergenic | 35.0% | |
| CATATTTGCAGCATCTTCTT+TGG | - | chr6.4:51245673-51245692 | None:intergenic | 35.0% | |
| CGTATACCATCACTAAACAA+AGG | + | chr6.4:51244387-51244406 | MS.gene80551:CDS | 35.0% | |
| CTTAATATCTACTTGGTTGC+AGG | + | chr6.4:51244806-51244825 | MS.gene80551:intron | 35.0% | |
| GTTGAAATTGTTGCATCATC+TGG | + | chr6.4:51243315-51243334 | MS.gene80551:intron | 35.0% | |
| TAGCAAATTACGGAAAACAG+TGG | - | chr6.4:51244289-51244308 | None:intergenic | 35.0% | |
| TATATATGAGACTAGGGAGT+AGG | + | chr6.4:51242890-51242909 | MS.gene80551:intron | 35.0% | |
| TATCATACCATGGACATAAG+TGG | - | chr6.4:51245245-51245264 | None:intergenic | 35.0% | |
| TCAAGCAGTTTATCATACCA+TGG | - | chr6.4:51245255-51245274 | None:intergenic | 35.0% | |
| TCACTAAACAAAGGGAGAAA+TGG | + | chr6.4:51244396-51244415 | MS.gene80551:CDS | 35.0% | |
| TCCTTAAGAAATCTGGAAGA+GGG | + | chr6.4:51246185-51246204 | MS.gene80551:CDS | 35.0% | |
| TGAAATGGATGATCTTGAGA+AGG | + | chr6.4:51245800-51245819 | MS.gene80551:CDS | 35.0% | |
| TGTTCTGCATGAAGATTAAG+AGG | - | chr6.4:51244569-51244588 | None:intergenic | 35.0% | |
| TTTGAAGGTAATAGCAAGAG+AGG | + | chr6.4:51246043-51246062 | MS.gene80551:CDS | 35.0% | |
| ! | CAATCATTCTCCTTTTCAAC+AGG | - | chr6.4:51245149-51245168 | None:intergenic | 35.0% |
| ! | CCCTCTTTTACTATGAAAAG+AGG | - | chr6.4:51243754-51243773 | None:intergenic | 35.0% |
| ! | GAACTTTTGATGCTCTTCAT+CGG | - | chr6.4:51244423-51244442 | None:intergenic | 35.0% |
| ! | GCAAAGTGCTTACCTAAATA+AGG | + | chr6.4:51243396-51243415 | MS.gene80551:intron | 35.0% |
| ! | GGACTCATGCAAAAGATTTT+AGG | + | chr6.4:51245306-51245325 | MS.gene80551:intron | 35.0% |
| ! | GGACTTTAAAGGAAAGGATT+TGG | + | chr6.4:51244722-51244741 | MS.gene80551:intron | 35.0% |
| ! | GGAGATGTTTCTGATTCATT+TGG | - | chr6.4:51244963-51244982 | None:intergenic | 35.0% |
| ! | TTTAGCTTATGGTTCATAGG+AGG | + | chr6.4:51245285-51245304 | MS.gene80551:intron | 35.0% |
| ! | TTTCTCCCTTTGTTTAGTGA+TGG | - | chr6.4:51244396-51244415 | None:intergenic | 35.0% |
| !! | CTTGAGGCTTTGAAACTTTA+TGG | + | chr6.4:51244443-51244462 | MS.gene80551:CDS | 35.0% |
| !! | CTTGCTATTACCTTCAAACA+AGG | - | chr6.4:51246041-51246060 | None:intergenic | 35.0% |
| !!! | GAACTTTTTTAGCTTCCCTA+TGG | - | chr6.4:51243064-51243083 | None:intergenic | 35.0% |
| AAAAAAAGTCTCCGGAAGAG+TGG | - | chr6.4:51243731-51243750 | None:intergenic | 40.0% | |
| AACTCAAAACATCGTCAGGA+AGG | + | chr6.4:51246157-51246176 | MS.gene80551:CDS | 40.0% | |
| ACCCTCTTCCAGATTTCTTA+AGG | - | chr6.4:51246189-51246208 | None:intergenic | 40.0% | |
| ACTACAGCACTGTTTCACAA+CGG | + | chr6.4:51244251-51244270 | MS.gene80551:intron | 40.0% | |
| ATGGATGATCTTGAGAAGGT+TGG | + | chr6.4:51245804-51245823 | MS.gene80551:CDS | 40.0% | |
| CAGAAGGAGAATCCATATGT+CGG | + | chr6.4:51245915-51245934 | MS.gene80551:CDS | 40.0% | |
| CTATTTAACATGCTGCTGCT+TGG | + | chr6.4:51243669-51243688 | MS.gene80551:intron | 40.0% | |
| CTCAAAACCACTTATGTCCA+TGG | + | chr6.4:51245235-51245254 | MS.gene80551:CDS | 40.0% | |
| CTCAAACTCAAAACATCGTC+AGG | + | chr6.4:51246153-51246172 | MS.gene80551:CDS | 40.0% | |
| GGAGTTGTCCTTAAGAAATC+TGG | + | chr6.4:51246178-51246197 | MS.gene80551:CDS | 40.0% | |
| GGTATGTCAATTGGCTGAAT+AGG | - | chr6.4:51244864-51244883 | None:intergenic | 40.0% | |
| GTCCTTAAGAAATCTGGAAG+AGG | + | chr6.4:51246184-51246203 | MS.gene80551:CDS | 40.0% | |
| GTGGAGGATTGAATGTAAGA+TGG | - | chr6.4:51243712-51243731 | None:intergenic | 40.0% | |
| TATATGAGACTAGGGAGTAG+GGG | + | chr6.4:51242892-51242911 | MS.gene80551:intron | 40.0% | |
| TATGTGAGATTTGAACGGGA+CGG | + | chr6.4:51243631-51243650 | MS.gene80551:intron | 40.0% | |
| TGGATGATCTTGAGAAGGTT+GGG | + | chr6.4:51245805-51245824 | MS.gene80551:CDS | 40.0% | |
| TTCTTAATCCTGTGCCTCTT+AGG | + | chr6.4:51246015-51246034 | MS.gene80551:CDS | 40.0% | |
| TTGCTATACAGTCGCTATAG+CGG | + | chr6.4:51244114-51244133 | MS.gene80551:intron | 40.0% | |
| TTTGGTCGAACACTCTCTAT+GGG | + | chr6.4:51245717-51245736 | MS.gene80551:intron | 40.0% | |
| ! | AGAGCATCAAAAGTTCCTTG+AGG | + | chr6.4:51244427-51244446 | MS.gene80551:CDS | 40.0% |
| ! | ATCATCTAGACTTTGGCTCA+TGG | + | chr6.4:51243226-51243245 | MS.gene80551:intron | 40.0% |
| ! | CATGGTTCAACTGCTTTGAA+AGG | + | chr6.4:51243244-51243263 | MS.gene80551:intron | 40.0% |
| ! | GTCCGAGATTATTTCTTCTG+AGG | + | chr6.4:51245635-51245654 | MS.gene80551:intron | 40.0% |
| ! | TCGAATCTGAACTGCAGTTT+TGG | - | chr6.4:51244600-51244619 | None:intergenic | 40.0% |
| ! | TTTGATGATTGCATGGCATG+AGG | - | chr6.4:51245995-51246014 | None:intergenic | 40.0% |
| !! | AAAGAGTCAACTGATTTGCG+AGG | - | chr6.4:51244924-51244943 | None:intergenic | 40.0% |
| !! | AAGAGTCAACTGATTTGCGA+GGG | - | chr6.4:51244923-51244942 | None:intergenic | 40.0% |
| !!! | CATAAGTGGTTTTGAGTTGG+TGG | - | chr6.4:51245231-51245250 | None:intergenic | 40.0% |
| !!! | GGACATAAGTGGTTTTGAGT+TGG | - | chr6.4:51245234-51245253 | None:intergenic | 40.0% |
| !!! | GGTTTTGAGTTGGTGGATAA+AGG | - | chr6.4:51245224-51245243 | None:intergenic | 40.0% |
| AACCTCGCTCCAACATTCTA+GGG | - | chr6.4:51243472-51243491 | None:intergenic | 45.0% | |
| ACCTTCAAACAAGGCCTAAG+AGG | - | chr6.4:51246032-51246051 | None:intergenic | 45.0% | |
| AGTGCGCAACTTTACCATTG+TGG | + | chr6.4:51245940-51245959 | MS.gene80551:CDS | 45.0% | |
| ATATGAGACTAGGGAGTAGG+GGG | + | chr6.4:51242893-51242912 | MS.gene80551:intron | 45.0% | |
| ATCTCGGTGGTGCAAGAATT+TGG | - | chr6.4:51245107-51245126 | None:intergenic | 45.0% | |
| CAATTGACATACCTCCTCCT+CGG | + | chr6.4:51244871-51244890 | MS.gene80551:CDS | 45.0% | |
| CACTGAATCAGTCTGCGATA+TGG | + | chr6.4:51246091-51246110 | MS.gene80551:CDS | 45.0% | |
| CATTCAATCCTCCACTCTTC+CGG | + | chr6.4:51243717-51243736 | MS.gene80551:intron | 45.0% | |
| CCATTGTGGAGTTTGTACCA+AGG | + | chr6.4:51245954-51245973 | MS.gene80551:CDS | 45.0% | |
| CCTTGGTACAAACTCCACAA+TGG | - | chr6.4:51245957-51245976 | None:intergenic | 45.0% | |
| GAAGGTAATAGCAAGAGAGG+AGG | + | chr6.4:51246046-51246065 | MS.gene80551:CDS | 45.0% | |
| GAGCATCATGGAACAACAGA+AGG | + | chr6.4:51245899-51245918 | MS.gene80551:CDS | 45.0% | |
| GGGTTCTCAGAAGTCAATGA+AGG | + | chr6.4:51245737-51245756 | MS.gene80551:intron | 45.0% | |
| GTAAAACAACCTTGGGAGCA+AGG | - | chr6.4:51244058-51244077 | None:intergenic | 45.0% | |
| GTTTGGTCGAACACTCTCTA+TGG | + | chr6.4:51245716-51245735 | MS.gene80551:intron | 45.0% | |
| TAACCTCGCTCCAACATTCT+AGG | - | chr6.4:51243473-51243492 | None:intergenic | 45.0% | |
| TCGCAGGATATACCTTCTGT+CGG | + | chr6.4:51244026-51244045 | MS.gene80551:CDS | 45.0% | |
| TGAAAATGATGCGAAGTCGC+AGG | + | chr6.4:51244010-51244029 | MS.gene80551:CDS | 45.0% | |
| TGAGAAGGTTGGGCAAAAAG+AGG | + | chr6.4:51245815-51245834 | MS.gene80551:CDS | 45.0% | |
| TGTACTGTCTGCACTTGGTT+CGG | + | chr6.4:51245031-51245050 | MS.gene80551:CDS | 45.0% | |
| TTCAGACTGTGATCCACCTT+TGG | - | chr6.4:51243994-51244013 | None:intergenic | 45.0% | |
| TTCGTTGTCCCCTAGAATGT+TGG | + | chr6.4:51243460-51243479 | MS.gene80551:intron | 45.0% | |
| ! | ACTGTGATCCACCTTTGGAA+TGG | - | chr6.4:51243989-51244008 | None:intergenic | 45.0% |
| ! | AGTAAGTGCCATTCCAAAGG+TGG | + | chr6.4:51243978-51243997 | MS.gene80551:CDS | 45.0% |
| ! | ATTCTAGGGGACAACGAACA+AGG | - | chr6.4:51243458-51243477 | None:intergenic | 45.0% |
| ! | ATTTGCGAGGGTATGGATGA+AGG | - | chr6.4:51244911-51244930 | None:intergenic | 45.0% |
| ! | GAGTAGGGGGAGTTTCTTTT+TGG | + | chr6.4:51242906-51242925 | MS.gene80551:intron | 45.0% |
| ! | GGTAGTAAGTGCCATTCCAA+AGG | + | chr6.4:51243975-51243994 | MS.gene80551:CDS | 45.0% |
| ! | GTTCAAGGCACTAAGTCAAC+TGG | + | chr6.4:51243948-51243967 | MS.gene80551:CDS | 45.0% |
| ! | TTTGCGAGGGTATGGATGAA+GGG | - | chr6.4:51244910-51244929 | None:intergenic | 45.0% |
| !! | GCTTTGAAACTTTATGGCCG+TGG | + | chr6.4:51244449-51244468 | MS.gene80551:CDS | 45.0% |
| !! | TCAACTGATTTGCGAGGGTA+TGG | - | chr6.4:51244918-51244937 | None:intergenic | 45.0% |
| AAAAGTCTCCGGAAGAGTGG+AGG | - | chr6.4:51243728-51243747 | None:intergenic | 50.0% | |
| ACAGTACAGAGGTAGGCGAT+TGG | - | chr6.4:51245019-51245038 | None:intergenic | 50.0% | |
| ACCAAGTGCAGACAGTACAG+AGG | - | chr6.4:51245030-51245049 | None:intergenic | 50.0% | |
| ACCTCGCTCCAACATTCTAG+GGG | - | chr6.4:51243471-51243490 | None:intergenic | 50.0% | |
| ACCTCTGTACTGTCTGCACT+TGG | + | chr6.4:51245026-51245045 | MS.gene80551:CDS | 50.0% | |
| ACGGGACGGCAATTAAGCTT+AGG | + | chr6.4:51243645-51243664 | MS.gene80551:intron | 50.0% | |
| AGTGCAGACAGTACAGAGGT+AGG | - | chr6.4:51245026-51245045 | None:intergenic | 50.0% | |
| ATGCTCACTTGAGCTCCATC+AGG | - | chr6.4:51245885-51245904 | None:intergenic | 50.0% | |
| CAGCTTGTCGCCTGTTGAAA+AGG | + | chr6.4:51245136-51245155 | MS.gene80551:CDS | 50.0% | |
| CAGTACAGAGGTAGGCGATT+GGG | - | chr6.4:51245018-51245037 | None:intergenic | 50.0% | |
| CCAGACATCCAAACCATCTG+AGG | + | chr6.4:51245169-51245188 | MS.gene80551:CDS | 50.0% | |
| CCATCTGAGGAGGAAGAGAA+AGG | + | chr6.4:51245182-51245201 | MS.gene80551:CDS | 50.0% | |
| CCTTTCTCTTCCTCCTCAGA+TGG | - | chr6.4:51245185-51245204 | None:intergenic | 50.0% | |
| CTACTTGGTTGCAGGTTGTG+CGG | + | chr6.4:51244814-51244833 | MS.gene80551:intron | 50.0% | |
| CTAGGCATGTGTACACCTGA+TGG | + | chr6.4:51245867-51245886 | MS.gene80551:CDS | 50.0% | |
| CTCTGCAACTGACAGGTTAG+TGG | - | chr6.4:51244988-51245007 | None:intergenic | 50.0% | |
| CTCTTCCTCCTCAGATGGTT+TGG | - | chr6.4:51245180-51245199 | None:intergenic | 50.0% | |
| CTTCAATTTGACGCCAGCCA+CGG | - | chr6.4:51244469-51244488 | None:intergenic | 50.0% | |
| GACATCCAAACCATCTGAGG+AGG | + | chr6.4:51245172-51245191 | MS.gene80551:CDS | 50.0% | |
| GAGGAGGAAAGTTCTTGCAC+TGG | + | chr6.4:51246062-51246081 | MS.gene80551:CDS | 50.0% | |
| GATGATTGCATGGCATGAGG+TGG | - | chr6.4:51245992-51246011 | None:intergenic | 50.0% | |
| GCAACTGACAGGTTAGTGGA+TGG | - | chr6.4:51244984-51245003 | None:intergenic | 50.0% | |
| GGATGAAGGGGTTTCCTCTT+CGG | - | chr6.4:51244897-51244916 | None:intergenic | 50.0% | |
| GGCACTAAGTCAACTGGAAC+AGG | + | chr6.4:51243954-51243973 | MS.gene80551:CDS | 50.0% | |
| TACTTGGTTGCAGGTTGTGC+GGG | + | chr6.4:51244815-51244834 | MS.gene80551:intron | 50.0% | |
| TGAAACTTTATGGCCGTGGC+TGG | + | chr6.4:51244453-51244472 | MS.gene80551:CDS | 50.0% | |
| TGGAGCTCAAGTGAGCATCA+TGG | + | chr6.4:51245887-51245906 | MS.gene80551:CDS | 50.0% | |
| TGTCGTTCTCTGCAACTGAC+AGG | - | chr6.4:51244995-51245014 | None:intergenic | 50.0% | |
| ! | AAACAAGGCCTAAGAGGCAC+AGG | - | chr6.4:51246026-51246045 | None:intergenic | 50.0% |
| ! | CCTCAGATGGTTTGGATGTC+TGG | - | chr6.4:51245172-51245191 | None:intergenic | 50.0% |
| ! | CGAGGAGGAGGTATGTCAAT+TGG | - | chr6.4:51244873-51244892 | None:intergenic | 50.0% |
| ! | GCAAGGTTGTTTCCGACAGA+AGG | - | chr6.4:51244041-51244060 | None:intergenic | 50.0% |
| ! | TTGCGAGGGTATGGATGAAG+GGG | - | chr6.4:51244909-51244928 | None:intergenic | 50.0% |
| !! | GCACTTGGTTCGGAAGCATT+TGG | + | chr6.4:51245041-51245060 | MS.gene80551:CDS | 50.0% |
| !! | GCCTCTTAGGCCTTGTTTGA+AGG | + | chr6.4:51246028-51246047 | MS.gene80551:CDS | 50.0% |
| CAAGCTGACCGGGTGAATCT+CGG | - | chr6.4:51245123-51245142 | None:intergenic | 55.0% | |
| CATGGCATGAGGTGGAAAGC+TGG | - | chr6.4:51245984-51246003 | None:intergenic | 55.0% | |
| CGGAAACAACCTTGCTCCCA+AGG | + | chr6.4:51244046-51244065 | MS.gene80551:CDS | 55.0% | |
| CGTGGCTGGCGTCAAATTGA+AGG | + | chr6.4:51244467-51244486 | MS.gene80551:CDS | 55.0% | |
| GCATGAGGTGGAAAGCTGGA+AGG | - | chr6.4:51245980-51245999 | None:intergenic | 55.0% | |
| GGACTTTCAGCACTGCCATC+AGG | - | chr6.4:51244843-51244862 | None:intergenic | 55.0% | |
| TCAACAGGCGACAAGCTGAC+CGG | - | chr6.4:51245134-51245153 | None:intergenic | 55.0% | |
| TCCCCTAGAATGTTGGAGCG+AGG | + | chr6.4:51243467-51243486 | MS.gene80551:intron | 55.0% | |
| TTGCACCACCGAGATTCACC+CGG | + | chr6.4:51245112-51245131 | MS.gene80551:CDS | 55.0% | |
| ! | GCTGCTGCTTGGTATGAAGC+AGG | + | chr6.4:51243680-51243699 | MS.gene80551:intron | 55.0% |
| CAACAGGCGACAAGCTGACC+GGG | - | chr6.4:51245133-51245152 | None:intergenic | 60.0% | |
| CAGGTTGTGCGGGAACCTGA+TGG | + | chr6.4:51244825-51244844 | MS.gene80551:intron | 60.0% | |
| GGTGGAAAGCTGGAAGGCCT+TGG | - | chr6.4:51245974-51245993 | None:intergenic | 60.0% | |
| GTTGCGCACTCGCCGACATA+TGG | - | chr6.4:51245930-51245949 | None:intergenic | 60.0% | |
| AGGGGTTTCCTCTTCGGCCG+AGG | - | chr6.4:51244891-51244910 | None:intergenic | 65.0% | |
| GCTGACCGGGTGAATCTCGG+TGG | - | chr6.4:51245120-51245139 | None:intergenic | 65.0% | |
| GGTTTCCTCTTCGGCCGAGG+AGG | - | chr6.4:51244888-51244907 | None:intergenic | 65.0% | |
| TACCTCCTCCTCGGCCGAAG+AGG | + | chr6.4:51244880-51244899 | MS.gene80551:CDS | 65.0% | |
| TTCCTCTTCGGCCGAGGAGG+AGG | - | chr6.4:51244885-51244904 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 51242651 | 51246232 | 51242651 | ID=MS.gene80551 |
| chr6.4 | mRNA | 51242651 | 51246232 | 51242651 | ID=MS.gene80551.t1;Parent=MS.gene80551 |
| chr6.4 | exon | 51242651 | 51242662 | 51242651 | ID=MS.gene80551.t1.exon1;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51242651 | 51242662 | 51242651 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| chr6.4 | exon | 51243942 | 51244067 | 51243942 | ID=MS.gene80551.t1.exon2;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51243942 | 51244067 | 51243942 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| chr6.4 | exon | 51244377 | 51244488 | 51244377 | ID=MS.gene80551.t1.exon3;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51244377 | 51244488 | 51244377 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| chr6.4 | exon | 51244585 | 51244646 | 51244585 | ID=MS.gene80551.t1.exon4;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51244585 | 51244646 | 51244585 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| chr6.4 | exon | 51244828 | 51245256 | 51244828 | ID=MS.gene80551.t1.exon5;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51244828 | 51245256 | 51244828 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| chr6.4 | exon | 51245747 | 51246232 | 51245747 | ID=MS.gene80551.t1.exon6;Parent=MS.gene80551.t1 |
| chr6.4 | CDS | 51245747 | 51246232 | 51245747 | ID=cds.MS.gene80551.t1;Parent=MS.gene80551.t1 |
| Gene Sequence |
| Protein sequence |
