Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80640.t1 | XP_003616553.2 | 99 | 306 | 3 | 0 | 1 | 306 | 1 | 306 | 3.70E-159 | 570.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80640.t1 | Q5XF09 | 86.8 | 303 | 40 | 0 | 4 | 306 | 6 | 308 | 3.2e-143 | 509.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80640.t1 | G7KBV5 | 99.0 | 306 | 3 | 0 | 1 | 306 | 1 | 306 | 2.6e-159 | 570.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050669 | MS.gene80640 | 0.808091 | 3.67E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene80640 | 0.828552 | 8.44E-55 | -1.69E-46 |
| MS.gene057422 | MS.gene80640 | 0.815451 | 9.18E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80640.t1 | MTR_5g081710 | 99.020 | 306 | 3 | 0 | 1 | 306 | 1 | 306 | 0.0 | 611 |
| MS.gene80640.t1 | MTR_3g070000 | 89.769 | 303 | 31 | 0 | 4 | 306 | 20 | 322 | 0.0 | 557 |
| MS.gene80640.t1 | MTR_3g462070 | 81.188 | 303 | 57 | 0 | 4 | 306 | 5 | 307 | 0.0 | 519 |
| MS.gene80640.t1 | MTR_4g018760 | 72.039 | 304 | 85 | 0 | 1 | 304 | 5 | 308 | 1.08e-161 | 452 |
| MS.gene80640.t1 | MTR_8g090130 | 73.490 | 298 | 77 | 2 | 8 | 304 | 11 | 307 | 1.74e-160 | 449 |
| MS.gene80640.t1 | MTR_4g101860 | 66.780 | 295 | 98 | 0 | 12 | 306 | 56 | 350 | 1.25e-134 | 386 |
| MS.gene80640.t1 | MTR_3g072380 | 33.010 | 309 | 199 | 2 | 1 | 303 | 1 | 307 | 1.08e-50 | 171 |
| MS.gene80640.t1 | MTR_1g030320 | 33.677 | 291 | 191 | 1 | 13 | 303 | 18 | 306 | 7.89e-50 | 169 |
| MS.gene80640.t1 | MTR_0011s0320 | 32.770 | 296 | 189 | 4 | 11 | 302 | 16 | 305 | 1.51e-35 | 131 |
| MS.gene80640.t1 | MTR_4g114360 | 32.558 | 301 | 183 | 6 | 11 | 302 | 16 | 305 | 2.83e-32 | 122 |
| MS.gene80640.t1 | MTR_3g072380 | 32.338 | 201 | 128 | 2 | 1 | 195 | 1 | 199 | 5.15e-32 | 119 |
| MS.gene80640.t1 | MTR_3g107470 | 30.201 | 298 | 194 | 5 | 11 | 302 | 20 | 309 | 8.87e-31 | 119 |
| MS.gene80640.t1 | MTR_7g110380 | 31.142 | 289 | 187 | 5 | 22 | 305 | 28 | 309 | 1.91e-27 | 110 |
| MS.gene80640.t1 | MTR_0662s0010 | 32.950 | 261 | 161 | 5 | 11 | 265 | 16 | 268 | 1.16e-26 | 106 |
| MS.gene80640.t1 | MTR_4g123900 | 29.758 | 289 | 191 | 5 | 22 | 305 | 24 | 305 | 3.19e-22 | 95.9 |
| MS.gene80640.t1 | MTR_2g070400 | 24.830 | 294 | 203 | 5 | 22 | 306 | 24 | 308 | 3.96e-21 | 92.0 |
| MS.gene80640.t1 | MTR_4g105630 | 26.441 | 295 | 201 | 7 | 16 | 303 | 92 | 377 | 1.99e-18 | 85.1 |
| MS.gene80640.t1 | MTR_4g123900 | 29.197 | 274 | 182 | 5 | 22 | 290 | 24 | 290 | 3.01e-18 | 83.6 |
| MS.gene80640.t1 | MTR_8g016090 | 24.422 | 303 | 213 | 7 | 9 | 299 | 169 | 467 | 1.51e-15 | 77.0 |
| MS.gene80640.t1 | MTR_4g105630 | 25.263 | 285 | 197 | 7 | 16 | 293 | 92 | 367 | 2.01e-14 | 73.2 |
| MS.gene80640.t1 | MTR_3g077640 | 28.384 | 229 | 161 | 3 | 81 | 306 | 178 | 406 | 3.48e-14 | 72.8 |
| MS.gene80640.t1 | MTR_4g088350 | 28.013 | 307 | 192 | 13 | 16 | 306 | 106 | 399 | 4.33e-14 | 72.4 |
| MS.gene80640.t1 | MTR_6g005480 | 27.575 | 301 | 201 | 5 | 12 | 303 | 116 | 408 | 6.46e-14 | 72.0 |
| MS.gene80640.t1 | MTR_5g044220 | 27.723 | 303 | 193 | 12 | 16 | 304 | 111 | 401 | 9.03e-14 | 71.6 |
| MS.gene80640.t1 | MTR_3g049400 | 22.549 | 306 | 225 | 7 | 3 | 303 | 103 | 401 | 6.77e-13 | 68.9 |
| MS.gene80640.t1 | MTR_2g022700 | 22.403 | 308 | 227 | 7 | 2 | 304 | 96 | 396 | 2.24e-12 | 67.4 |
| MS.gene80640.t1 | MTR_2g038410 | 26.909 | 275 | 171 | 9 | 21 | 283 | 67 | 323 | 3.21e-12 | 67.0 |
| MS.gene80640.t1 | MTR_2g094640 | 25.392 | 319 | 210 | 8 | 1 | 305 | 1 | 305 | 1.02e-11 | 65.1 |
| MS.gene80640.t1 | MTR_8g016090 | 26.009 | 223 | 149 | 6 | 87 | 299 | 201 | 417 | 1.05e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80640.t1 | AT3G11320 | 86.799 | 303 | 40 | 0 | 4 | 306 | 6 | 308 | 0.0 | 544 |
| MS.gene80640.t1 | AT5G05820 | 84.967 | 306 | 46 | 0 | 1 | 306 | 3 | 308 | 0.0 | 539 |
| MS.gene80640.t1 | AT5G04160 | 71.336 | 307 | 85 | 1 | 1 | 304 | 1 | 307 | 2.37e-160 | 449 |
| MS.gene80640.t1 | AT3G10290 | 71.717 | 297 | 84 | 0 | 8 | 304 | 57 | 353 | 9.41e-159 | 447 |
| MS.gene80640.t1 | AT1G12500 | 65.347 | 303 | 105 | 0 | 4 | 306 | 54 | 356 | 6.48e-139 | 397 |
| MS.gene80640.t1 | AT1G21870 | 35.836 | 293 | 182 | 4 | 13 | 303 | 19 | 307 | 5.60e-52 | 174 |
| MS.gene80640.t1 | AT1G77610 | 34.868 | 304 | 194 | 3 | 1 | 303 | 1 | 301 | 7.64e-52 | 174 |
| MS.gene80640.t1 | AT5G11230 | 31.773 | 299 | 190 | 5 | 13 | 305 | 22 | 312 | 3.85e-33 | 125 |
| MS.gene80640.t1 | AT5G25400 | 31.544 | 298 | 190 | 5 | 11 | 302 | 20 | 309 | 3.80e-32 | 122 |
| MS.gene80640.t1 | AT4G32390 | 31.544 | 298 | 190 | 5 | 11 | 302 | 20 | 309 | 2.80e-31 | 120 |
| MS.gene80640.t1 | AT2G25520 | 31.879 | 298 | 189 | 5 | 11 | 302 | 20 | 309 | 1.94e-30 | 117 |
| MS.gene80640.t1 | AT3G17430 | 30.450 | 289 | 189 | 5 | 22 | 305 | 25 | 306 | 2.34e-26 | 107 |
| MS.gene80640.t1 | AT3G17430 | 30.450 | 289 | 189 | 5 | 22 | 305 | 25 | 306 | 2.34e-26 | 107 |
| MS.gene80640.t1 | AT1G53660 | 26.042 | 288 | 202 | 5 | 22 | 305 | 30 | 310 | 7.56e-25 | 102 |
| MS.gene80640.t1 | AT1G53660 | 26.042 | 288 | 202 | 5 | 22 | 305 | 48 | 328 | 9.88e-25 | 102 |
| MS.gene80640.t1 | AT1G53660 | 25.735 | 272 | 193 | 4 | 36 | 305 | 12 | 276 | 1.92e-23 | 97.8 |
| MS.gene80640.t1 | AT3G14410 | 26.480 | 321 | 212 | 6 | 1 | 306 | 1 | 312 | 1.92e-22 | 95.9 |
| MS.gene80640.t1 | AT1G48230 | 31.058 | 293 | 182 | 6 | 22 | 305 | 25 | 306 | 2.03e-22 | 96.3 |
| MS.gene80640.t1 | AT1G53660 | 26.009 | 223 | 157 | 3 | 84 | 305 | 1 | 216 | 6.46e-19 | 84.3 |
| MS.gene80640.t1 | AT1G48230 | 30.213 | 235 | 146 | 5 | 78 | 305 | 10 | 233 | 6.75e-15 | 73.9 |
| MS.gene80640.t1 | AT5G17630 | 25.168 | 298 | 207 | 9 | 16 | 306 | 119 | 407 | 1.09e-14 | 74.3 |
| MS.gene80640.t1 | AT3G01550 | 26.962 | 293 | 204 | 5 | 16 | 303 | 86 | 373 | 2.86e-14 | 73.2 |
| MS.gene80640.t1 | AT5G57100 | 25.260 | 289 | 203 | 7 | 21 | 306 | 76 | 354 | 3.05e-14 | 73.2 |
| MS.gene80640.t1 | AT5G54800 | 23.607 | 305 | 221 | 7 | 3 | 302 | 90 | 387 | 6.58e-14 | 72.0 |
| MS.gene80640.t1 | AT1G06470 | 23.453 | 307 | 211 | 8 | 9 | 299 | 75 | 373 | 2.03e-13 | 70.5 |
| MS.gene80640.t1 | AT1G06470 | 23.453 | 307 | 211 | 8 | 9 | 299 | 75 | 373 | 2.03e-13 | 70.5 |
| MS.gene80640.t1 | AT1G06470 | 23.453 | 307 | 211 | 8 | 9 | 299 | 75 | 373 | 2.03e-13 | 70.5 |
| MS.gene80640.t1 | AT1G06470 | 23.453 | 307 | 211 | 8 | 9 | 299 | 75 | 373 | 2.03e-13 | 70.5 |
| MS.gene80640.t1 | AT1G53660 | 28.333 | 180 | 122 | 4 | 22 | 196 | 48 | 225 | 2.94e-13 | 68.6 |
| MS.gene80640.t1 | AT5G33320 | 27.759 | 299 | 198 | 8 | 12 | 302 | 111 | 399 | 1.89e-12 | 67.8 |
| MS.gene80640.t1 | AT1G61800 | 21.498 | 307 | 229 | 7 | 2 | 303 | 89 | 388 | 3.08e-12 | 67.0 |
| MS.gene80640.t1 | AT5G46110 | 26.797 | 306 | 197 | 11 | 16 | 306 | 2 | 295 | 6.69e-12 | 65.5 |
| MS.gene80640.t1 | AT1G61800 | 21.036 | 309 | 232 | 7 | 2 | 305 | 89 | 390 | 8.93e-12 | 65.9 |
| MS.gene80640.t1 | AT5G46110 | 26.230 | 305 | 200 | 9 | 16 | 306 | 115 | 408 | 9.79e-12 | 65.5 |
| MS.gene80640.t1 | AT5G46110 | 26.490 | 302 | 198 | 9 | 16 | 304 | 115 | 405 | 1.31e-11 | 65.1 |
| MS.gene80640.t1 | AT3G01550 | 27.211 | 294 | 197 | 8 | 16 | 303 | 86 | 368 | 2.83e-11 | 63.9 |
| MS.gene80640.t1 | AT2G28315 | 23.920 | 301 | 211 | 6 | 6 | 299 | 5 | 294 | 3.44e-11 | 63.5 |
| MS.gene80640.t1 | AT2G28315 | 23.920 | 301 | 211 | 6 | 6 | 299 | 5 | 294 | 6.62e-11 | 62.8 |
| MS.gene80640.t1 | AT5G55950 | 26.408 | 284 | 192 | 7 | 21 | 299 | 9 | 280 | 9.36e-11 | 62.4 |
Find 59 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCTTGTTCCTGTTGTTAC+TGG | 0.193329 | 5.4:+64418395 | MS.gene80640:CDS |
| GAACCAAGCTTCCATTTGTT+TGG | 0.241327 | 5.4:+64420209 | MS.gene80640:CDS |
| ATCATTCCAGTGACTGAAAC+TGG | 0.253281 | 5.4:-64421433 | None:intergenic |
| TGACACATGGTGAGGAAAAT+TGG | 0.261872 | 5.4:-64418110 | None:intergenic |
| TGCAATCGCTTGGTTCAAAA+TGG | 0.276655 | 5.4:+64418163 | MS.gene80640:CDS |
| GGCTTTGCTTGATTCTTTCA+TGG | 0.277463 | 5.4:-64417994 | None:intergenic |
| AACCAAGCTTCCATTTGTTT+GGG | 0.304562 | 5.4:+64420210 | MS.gene80640:CDS |
| TCTCCCTGCTACACTCTATA+TGG | 0.317267 | 5.4:+64420467 | MS.gene80640:CDS |
| TTGAAAGGAGATACTTGTTT+AGG | 0.330177 | 5.4:-64418070 | None:intergenic |
| GATTGCAACGTAGCTGAATA+AGG | 0.384927 | 5.4:-64418147 | None:intergenic |
| TACCAGTGCTCTCACCCTTC+AGG | 0.394449 | 5.4:+64420614 | MS.gene80640:CDS |
| GAGATGATGTGAAGATCATT+TGG | 0.421654 | 5.4:+64420526 | MS.gene80640:CDS |
| AGTTTCAGTCACTGGAATGA+TGG | 0.435874 | 5.4:+64421435 | MS.gene80640:CDS |
| GGTTATTCACTCACAGTCCT+TGG | 0.450720 | 5.4:+64421457 | MS.gene80640:CDS |
| AGGTACTTGGGAATGCTAAA+GGG | 0.451974 | 5.4:+64421371 | MS.gene80640:intron |
| CTGGTGTTATCATTGCTAGT+GGG | 0.461823 | 5.4:+64418414 | MS.gene80640:CDS |
| AGAAACCCAGTTTCAGTCAC+TGG | 0.462050 | 5.4:+64421427 | MS.gene80640:CDS |
| AGTTTGTTCATATAGGTACT+TGG | 0.462356 | 5.4:+64421358 | MS.gene80640:intron |
| TTGGAGCCATGTAAAGTAGA+AGG | 0.468805 | 5.4:-64420428 | None:intergenic |
| TCTTCCATATAGAGTGTAGC+AGG | 0.470180 | 5.4:-64420471 | None:intergenic |
| TATGAACCTTCTACTTTACA+TGG | 0.472403 | 5.4:+64420422 | MS.gene80640:CDS |
| TAGGTACTTGGGAATGCTAA+AGG | 0.479924 | 5.4:+64421370 | MS.gene80640:intron |
| ATATTATGAACCCAAACAAA+TGG | 0.482955 | 5.4:-64420220 | None:intergenic |
| ATGATAACACCAGTAACAAC+AGG | 0.491199 | 5.4:-64418404 | None:intergenic |
| AATGATCTTCACATCATCTC+TGG | 0.491323 | 5.4:-64420523 | None:intergenic |
| AACCCAAACAAATGGAAGCT+TGG | 0.492671 | 5.4:-64420212 | None:intergenic |
| TCAGCTACGTTGCAATCGCT+TGG | 0.501471 | 5.4:+64418153 | MS.gene80640:CDS |
| AAGTATCTCCTTTCAAACTA+CGG | 0.511440 | 5.4:+64418077 | MS.gene80640:CDS |
| GACACATGGTGAGGAAAATT+GGG | 0.517372 | 5.4:-64418109 | None:intergenic |
| AGAAGGAAAACAACAGCCAT+TGG | 0.520144 | 5.4:-64420447 | None:intergenic |
| GTTTGTTCATATAGGTACTT+GGG | 0.521176 | 5.4:+64421359 | MS.gene80640:intron |
| TCTACTTTACATGGCTCCAA+TGG | 0.521350 | 5.4:+64420431 | MS.gene80640:CDS |
| TACCTGAAGGGTGAGAGCAC+TGG | 0.521847 | 5.4:-64420616 | None:intergenic |
| GTTTCAGTCACTGGAATGAT+GGG | 0.522262 | 5.4:+64421436 | MS.gene80640:CDS |
| ATTTGAAACCGTAGTTTGAA+AGG | 0.524913 | 5.4:-64418085 | None:intergenic |
| GGAGATACTTGTTTAGGAGT+AGG | 0.527615 | 5.4:-64418064 | None:intergenic |
| CGAGAACGCATGAATTGCAT+TGG | 0.534806 | 5.4:-64418188 | None:intergenic |
| GTGTCGTTTAATCAAGCTAT+CGG | 0.549847 | 5.4:+64418296 | MS.gene80640:CDS |
| TATAGAGTGTAGCAGGGAGA+AGG | 0.554014 | 5.4:-64420464 | None:intergenic |
| TGACGTTGAAGAGAGAAGCT+TGG | 0.560897 | 5.4:+64418360 | MS.gene80640:CDS |
| ACTGGTGTTATCATTGCTAG+TGG | 0.562721 | 5.4:+64418413 | MS.gene80640:CDS |
| TAGGAGTAGGACTCCTATGT+TGG | 0.563888 | 5.4:-64418051 | None:intergenic |
| TCATTCCAGTGACTGAAACT+GGG | 0.574484 | 5.4:-64421432 | None:intergenic |
| CAAGTGCGGAATTGAACAGC+AGG | 0.586756 | 5.4:-64420551 | None:intergenic |
| AAAAGGGAGGCATACCTGAA+GGG | 0.598277 | 5.4:-64420628 | None:intergenic |
| CTTCCATATAGAGTGTAGCA+GGG | 0.600562 | 5.4:-64420470 | None:intergenic |
| GGTACTTGGGAATGCTAAAG+GGG | 0.601716 | 5.4:+64421372 | MS.gene80640:intron |
| GCATGGTACTCATCCAACAT+AGG | 0.604171 | 5.4:+64418038 | MS.gene80640:CDS |
| TATATGGAAGAAAATGTGAT+CGG | 0.605292 | 5.4:+64420483 | MS.gene80640:CDS |
| TGAGATTAATGTTATTGTGA+AGG | 0.605559 | 5.4:-64418015 | None:intergenic |
| TGGTGTTATCATTGCTAGTG+GGG | 0.620873 | 5.4:+64418415 | MS.gene80640:CDS |
| CACTATAAAGTACAACTCCA+AGG | 0.624587 | 5.4:-64421474 | None:intergenic |
| ATTGACAAAATATGCAAGTG+CGG | 0.636129 | 5.4:-64420565 | None:intergenic |
| AATATGTGTTGCAGCTACAG+CGG | 0.656983 | 5.4:+64420238 | MS.gene80640:CDS |
| CAATAACATTAATCTCAGCA+TGG | 0.659834 | 5.4:+64418021 | MS.gene80640:CDS |
| AAATGTGATCGGCATCACGT+TGG | 0.673641 | 5.4:+64420494 | MS.gene80640:CDS |
| ATAGCTTGATTAAACGACAC+AGG | 0.688704 | 5.4:-64418293 | None:intergenic |
| ACATGCTGTCATGTGACACA+TGG | 0.739726 | 5.4:-64418123 | None:intergenic |
| CTGTCATGTGACACATGGTG+AGG | 0.745537 | 5.4:-64418118 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAAGTTATATAATAAAT+GGG | + | chr5.4:64420359-64420378 | MS.gene80640:intron | 10.0% |
| !! | TTATCAAGTTATATAATAAA+TGG | + | chr5.4:64420358-64420377 | MS.gene80640:intron | 10.0% |
| !!! | AAAATGTAAATATTTGTTTT+TGG | + | chr5.4:64421162-64421181 | MS.gene80640:intron | 10.0% |
| !!! | AAATGTAAATATTTGTTTTT+GGG | + | chr5.4:64421163-64421182 | MS.gene80640:intron | 10.0% |
| !!! | AAATTTGAAATAAATAAGTT+TGG | - | chr5.4:64418766-64418785 | None:intergenic | 10.0% |
| !!! | ATTTTTACTTATATTTAAGA+TGG | + | chr5.4:64418803-64418822 | MS.gene80640:intron | 10.0% |
| !!! | TTTTGTAATTTTTTATTGTT+GGG | + | chr5.4:64418661-64418680 | MS.gene80640:intron | 10.0% |
| !! | AAAGTTTATAAATTGCATTT+AGG | + | chr5.4:64418612-64418631 | MS.gene80640:intron | 15.0% |
| !! | AAGTTTATAAATTGCATTTA+GGG | + | chr5.4:64418613-64418632 | MS.gene80640:intron | 15.0% |
| !! | AATCAAATTAAGCAAAATTA+TGG | + | chr5.4:64419585-64419604 | MS.gene80640:intron | 15.0% |
| !! | ATTTCTCAATTAAAAAAATC+TGG | + | chr5.4:64419241-64419260 | MS.gene80640:intron | 15.0% |
| !!! | AAAATAAGAAGTATAAAAGT+TGG | + | chr5.4:64418993-64419012 | MS.gene80640:intron | 15.0% |
| !!! | AATATAATTTTCTTAAGCAA+GGG | - | chr5.4:64418692-64418711 | None:intergenic | 15.0% |
| !!! | AGATTTTTTTAATTGAGAAA+TGG | - | chr5.4:64419242-64419261 | None:intergenic | 15.0% |
| !!! | CTTTTGTAATTTTTTATTGT+TGG | + | chr5.4:64418660-64418679 | MS.gene80640:intron | 15.0% |
| !!! | TAATATAATTTTCTTAAGCA+AGG | - | chr5.4:64418693-64418712 | None:intergenic | 15.0% |
| !! | AATGATCAAATCTTTATCAT+AGG | + | chr5.4:64420034-64420053 | MS.gene80640:intron | 20.0% |
| !! | AATTTAGTGTGATTATATGT+TGG | + | chr5.4:64419099-64419118 | MS.gene80640:intron | 20.0% |
| !! | AGTTTATAAATTGCATTTAG+GGG | + | chr5.4:64418614-64418633 | MS.gene80640:intron | 20.0% |
| !! | ATTAATCACAACAAATGAAA+TGG | + | chr5.4:64418871-64418890 | MS.gene80640:intron | 20.0% |
| !! | TAATGAGTATGATTCAAATA+AGG | + | chr5.4:64421228-64421247 | MS.gene80640:intron | 20.0% |
| !! | TATGAAAATAAGAATCGTTA+TGG | + | chr5.4:64420142-64420161 | MS.gene80640:intron | 20.0% |
| !!! | ACAATTGTTTTAAACTTTGT+AGG | + | chr5.4:64421116-64421135 | MS.gene80640:intron | 20.0% |
| !!! | CAATTGTTTTAAACTTTGTA+GGG | + | chr5.4:64421117-64421136 | MS.gene80640:intron | 20.0% |
| !!! | TTTGCTTACATTTTTTTTAG+AGG | - | chr5.4:64418740-64418759 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTAATTCCTAAAA+GGG | + | chr5.4:64418903-64418922 | MS.gene80640:intron | 20.0% |
| !!! | TTTTTGTCTTAATTCCTAAA+AGG | + | chr5.4:64418902-64418921 | MS.gene80640:intron | 20.0% |
| ! | ACTTAAATCAGATATTTCAC+TGG | - | chr5.4:64419919-64419938 | None:intergenic | 25.0% |
| ! | AGTTGTATGACTATATGAAA+AGG | - | chr5.4:64420648-64420667 | None:intergenic | 25.0% |
| ! | ATATTATGAACCCAAACAAA+TGG | - | chr5.4:64420223-64420242 | None:intergenic | 25.0% |
| ! | CAGAAGAAAACAAATTAATG+AGG | - | chr5.4:64420338-64420357 | None:intergenic | 25.0% |
| ! | CATAATTATTTCAAACCTCT+TGG | + | chr5.4:64420805-64420824 | MS.gene80640:intron | 25.0% |
| ! | GTTATTCAATTTGTACGATT+TGG | + | chr5.4:64418541-64418560 | MS.gene80640:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | - | chr5.4:64419753-64419772 | None:intergenic | 25.0% |
| ! | GTTGTATGACTATATGAAAA+GGG | - | chr5.4:64420647-64420666 | None:intergenic | 25.0% |
| ! | TAATCACACTAAATTATGTG+AGG | - | chr5.4:64419094-64419113 | None:intergenic | 25.0% |
| ! | TATATGGAAGAAAATGTGAT+CGG | + | chr5.4:64420483-64420502 | MS.gene80640:CDS | 25.0% |
| ! | TGAGATTAATGTTATTGTGA+AGG | - | chr5.4:64418018-64418037 | None:intergenic | 25.0% |
| ! | TTCAGATCATTAGATTTCTT+TGG | + | chr5.4:64421041-64421060 | MS.gene80640:intron | 25.0% |
| !! | AAGAAACTTGTTTATAACAG+TGG | - | chr5.4:64420749-64420768 | None:intergenic | 25.0% |
| !! | ATCTGATTTAAGTTTGTGTT+AGG | + | chr5.4:64419926-64419945 | MS.gene80640:intron | 25.0% |
| !! | ATGTTTTGTGACCAAAAAAT+TGG | - | chr5.4:64420595-64420614 | None:intergenic | 25.0% |
| !! | TACTAATGACTTTTGATAAG+TGG | - | chr5.4:64419617-64419636 | None:intergenic | 25.0% |
| !!! | AATGCTGCTTATATTTTCAT+TGG | + | chr5.4:64420843-64420862 | MS.gene80640:intron | 25.0% |
| !!! | ACAATTGTTTCTGATTTACA+AGG | - | chr5.4:64418930-64418949 | None:intergenic | 25.0% |
| !!! | ACCATGTTATTTATGTTTTC+GGG | + | chr5.4:64419341-64419360 | MS.gene80640:intron | 25.0% |
| !!! | AGTATATTCTAGAACAGTTT+TGG | + | chr5.4:64418831-64418850 | MS.gene80640:intron | 25.0% |
| !!! | CGATTCTTATTTTCATAGTT+TGG | - | chr5.4:64420139-64420158 | None:intergenic | 25.0% |
| !!! | GACCATGTTATTTATGTTTT+CGG | + | chr5.4:64419340-64419359 | MS.gene80640:intron | 25.0% |
| !!! | TATTTATGTTTTCGGGATTT+TGG | + | chr5.4:64419348-64419367 | MS.gene80640:intron | 25.0% |
| !!! | TCAATTGTTTTTATGAGCAA+TGG | + | chr5.4:64419703-64419722 | MS.gene80640:intron | 25.0% |
| !!! | TGGACTTTGTTTTTAAAACT+GGG | + | chr5.4:64419531-64419550 | MS.gene80640:intron | 25.0% |
| !!! | TTGGACTTTGTTTTTAAAAC+TGG | + | chr5.4:64419530-64419549 | MS.gene80640:intron | 25.0% |
| !!! | TTTTTGGTAATGTTTCGTTA+CGG | + | chr5.4:64418264-64418283 | MS.gene80640:CDS | 25.0% |
| AAGTATCTCCTTTCAAACTA+CGG | + | chr5.4:64418077-64418096 | MS.gene80640:CDS | 30.0% | |
| ACAATTGAACTAGATCTGTA+TGG | - | chr5.4:64419691-64419710 | None:intergenic | 30.0% | |
| AGAGATTCTTATGTACACAA+TGG | - | chr5.4:64419886-64419905 | None:intergenic | 30.0% | |
| AGCTGACATCATATAAATCA+AGG | - | chr5.4:64419963-64419982 | None:intergenic | 30.0% | |
| ATAAATTGCATTTAGGGGTA+TGG | + | chr5.4:64418619-64418638 | MS.gene80640:intron | 30.0% | |
| ATTGACAAAATATGCAAGTG+CGG | - | chr5.4:64420568-64420587 | None:intergenic | 30.0% | |
| CAATAACATTAATCTCAGCA+TGG | + | chr5.4:64418021-64418040 | MS.gene80640:CDS | 30.0% | |
| CTTCATAGTCTACATGTATA+CGG | + | chr5.4:64419190-64419209 | MS.gene80640:intron | 30.0% | |
| CTTGATATGTTCATATTGTG+TGG | + | chr5.4:64420059-64420078 | MS.gene80640:intron | 30.0% | |
| GAGAGTTCATTAACAACTTA+AGG | + | chr5.4:64419315-64419334 | MS.gene80640:intron | 30.0% | |
| GTTTGTTCATATAGGTACTT+GGG | + | chr5.4:64421359-64421378 | MS.gene80640:intron | 30.0% | |
| TATAACAGTGGAAAAAAGCT+AGG | - | chr5.4:64420737-64420756 | None:intergenic | 30.0% | |
| TATGAACCTTCTACTTTACA+TGG | + | chr5.4:64420422-64420441 | MS.gene80640:CDS | 30.0% | |
| TCCCGAAAACATAAATAACA+TGG | - | chr5.4:64419345-64419364 | None:intergenic | 30.0% | |
| TGAGGTTCTCAAATTATTAG+CGG | - | chr5.4:64419076-64419095 | None:intergenic | 30.0% | |
| TTCACTTTGCAGTTACTAAT+AGG | + | chr5.4:64420004-64420023 | MS.gene80640:intron | 30.0% | |
| TTGAAAGGAGATACTTGTTT+AGG | - | chr5.4:64418073-64418092 | None:intergenic | 30.0% | |
| ! | AAATTGACATCCTTAGTTCT+AGG | - | chr5.4:64420931-64420950 | None:intergenic | 30.0% |
| ! | AGTTTGTTCATATAGGTACT+TGG | + | chr5.4:64421358-64421377 | MS.gene80640:intron | 30.0% |
| ! | ATCGAAGAGTTTGTTCATAT+AGG | + | chr5.4:64421351-64421370 | MS.gene80640:intron | 30.0% |
| ! | ATTTGAAACCGTAGTTTGAA+AGG | - | chr5.4:64418088-64418107 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCTTTGCTTACA+GGG | + | chr5.4:64420185-64420204 | MS.gene80640:intron | 30.0% |
| ! | GAATTTTGCTTTCATCTGAA+GGG | + | chr5.4:64420288-64420307 | MS.gene80640:CDS | 30.0% |
| ! | TAAATTGCATTTAGGGGTAT+GGG | + | chr5.4:64418620-64418639 | MS.gene80640:intron | 30.0% |
| ! | TCTTTTCTTTCTTTGCTTAC+AGG | + | chr5.4:64420184-64420203 | MS.gene80640:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr5.4:64419757-64419776 | MS.gene80640:intron | 30.0% |
| !! | AACTTTTCCTGATCTAGAAT+AGG | - | chr5.4:64421208-64421227 | None:intergenic | 30.0% |
| !!! | CTTATTTGGTGTTTTGATGA+TGG | + | chr5.4:64420102-64420121 | MS.gene80640:intron | 30.0% |
| !!! | TGTCAATCTGACCAATTTTT+TGG | + | chr5.4:64420581-64420600 | MS.gene80640:CDS | 30.0% |
| !!! | TTCTTATTTTTCTCTCTCCT+CGG | - | chr5.4:64418983-64419002 | None:intergenic | 30.0% |
| AACCAAGCTTCCATTTGTTT+GGG | + | chr5.4:64420210-64420229 | MS.gene80640:CDS | 35.0% | |
| AATGATCTTCACATCATCTC+TGG | - | chr5.4:64420526-64420545 | None:intergenic | 35.0% | |
| ACAAAAAAAATTGCAGCAGC+CGG | - | chr5.4:64421074-64421093 | None:intergenic | 35.0% | |
| AGTTGGAGATAATCTAAGCA+CGG | + | chr5.4:64419010-64419029 | MS.gene80640:intron | 35.0% | |
| ATAGCTTGATTAAACGACAC+AGG | - | chr5.4:64418296-64418315 | None:intergenic | 35.0% | |
| ATCACAAGAACCTAGAACTA+AGG | + | chr5.4:64420918-64420937 | MS.gene80640:intron | 35.0% | |
| ATGATAACACCAGTAACAAC+AGG | - | chr5.4:64418407-64418426 | None:intergenic | 35.0% | |
| CACTATAAAGTACAACTCCA+AGG | - | chr5.4:64421477-64421496 | None:intergenic | 35.0% | |
| CAGTAAAACCTGAAATGTCA+TGG | - | chr5.4:64421020-64421039 | None:intergenic | 35.0% | |
| CGAAACATTACCAAAAACGA+CGG | - | chr5.4:64418261-64418280 | None:intergenic | 35.0% | |
| CGTGTTTGATTGAAATGTGT+CGG | + | chr5.4:64418567-64418586 | MS.gene80640:intron | 35.0% | |
| GAGATGATGTGAAGATCATT+TGG | + | chr5.4:64420526-64420545 | MS.gene80640:CDS | 35.0% | |
| GCAAAAACCGCAGTAAAAAA+CGG | - | chr5.4:64418332-64418351 | None:intergenic | 35.0% | |
| GTATGACTATATGAAAAGGG+AGG | - | chr5.4:64420644-64420663 | None:intergenic | 35.0% | |
| TATGAAGCACAGACATTTCT+CGG | - | chr5.4:64419177-64419196 | None:intergenic | 35.0% | |
| TCATACACCTATTCTAGATC+AGG | + | chr5.4:64421198-64421217 | MS.gene80640:intron | 35.0% | |
| TCCAGTATGTAACTGAACTT+GGG | + | chr5.4:64419275-64419294 | MS.gene80640:intron | 35.0% | |
| TCTTTGTTCCATGACATTTC+AGG | + | chr5.4:64421009-64421028 | MS.gene80640:intron | 35.0% | |
| TTCCAGTATGTAACTGAACT+TGG | + | chr5.4:64419274-64419293 | MS.gene80640:intron | 35.0% | |
| TTTCAAACCTCTTGGAAAAG+AGG | + | chr5.4:64420813-64420832 | MS.gene80640:intron | 35.0% | |
| ! | ATGACTTTTGATAAGTGGCA+AGG | - | chr5.4:64419612-64419631 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.4:64419737-64419756 | MS.gene80640:intron | 35.0% |
| ! | GGAATTTTGCTTTCATCTGA+AGG | + | chr5.4:64420287-64420306 | MS.gene80640:CDS | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+TGG | + | chr5.4:64419827-64419846 | MS.gene80640:intron | 35.0% |
| ! | TGATTTACAAGGACCCTTTT+AGG | - | chr5.4:64418919-64418938 | None:intergenic | 35.0% |
| ! | TTTTTGTACCTCTGCAACTA+AGG | - | chr5.4:64419483-64419502 | None:intergenic | 35.0% |
| !! | CTTGTGCTGATTCTAACTAT+TGG | + | chr5.4:64419654-64419673 | MS.gene80640:intron | 35.0% |
| !! | GAAAAGCGTTTCATTTCACA+TGG | - | chr5.4:64419987-64420006 | None:intergenic | 35.0% |
| !! | GTGTCGTTTAATCAAGCTAT+CGG | + | chr5.4:64418296-64418315 | MS.gene80640:CDS | 35.0% |
| !! | TGAAGTGTTTCCCTTTTAAC+AGG | - | chr5.4:64419566-64419585 | None:intergenic | 35.0% |
| !! | TGTTTTTATGAGCAATGGAG+TGG | + | chr5.4:64419708-64419727 | MS.gene80640:intron | 35.0% |
| !!! | CTGTTTTTGGTGGACTTATT+TGG | + | chr5.4:64420088-64420107 | MS.gene80640:intron | 35.0% |
| AAAGTCCAAGACCGCAATTT+GGG | - | chr5.4:64419519-64419538 | None:intergenic | 40.0% | |
| AACCCAAACAAATGGAAGCT+TGG | - | chr5.4:64420215-64420234 | None:intergenic | 40.0% | |
| AATATGTGTTGCAGCTACAG+CGG | + | chr5.4:64420238-64420257 | MS.gene80640:CDS | 40.0% | |
| ACAGTGGAAAAAAGCTAGGT+TGG | - | chr5.4:64420733-64420752 | None:intergenic | 40.0% | |
| ACCTCTGCAACTAAGGTTAA+GGG | - | chr5.4:64419476-64419495 | None:intergenic | 40.0% | |
| AGAAGGAAAACAACAGCCAT+TGG | - | chr5.4:64420450-64420469 | None:intergenic | 40.0% | |
| AGATTTCTTTGGCCAAAAGC+CGG | + | chr5.4:64421052-64421071 | MS.gene80640:intron | 40.0% | |
| AGGTACTTGGGAATGCTAAA+GGG | + | chr5.4:64421371-64421390 | MS.gene80640:intron | 40.0% | |
| AGTTTCAGTCACTGGAATGA+TGG | + | chr5.4:64421435-64421454 | MS.gene80640:CDS | 40.0% | |
| ATCATTCCAGTGACTGAAAC+TGG | - | chr5.4:64421436-64421455 | None:intergenic | 40.0% | |
| CCAGTATGTAACTGAACTTG+GGG | + | chr5.4:64419276-64419295 | MS.gene80640:intron | 40.0% | |
| CTTCCATATAGAGTGTAGCA+GGG | - | chr5.4:64420473-64420492 | None:intergenic | 40.0% | |
| GAACCAAGCTTCCATTTGTT+TGG | + | chr5.4:64420209-64420228 | MS.gene80640:CDS | 40.0% | |
| GACACATGGTGAGGAAAATT+GGG | - | chr5.4:64418112-64418131 | None:intergenic | 40.0% | |
| GAGCTAGACTCCTGTTAAAA+GGG | + | chr5.4:64419553-64419572 | MS.gene80640:intron | 40.0% | |
| GATTGCAACGTAGCTGAATA+AGG | - | chr5.4:64418150-64418169 | None:intergenic | 40.0% | |
| GGAGATACTTGTTTAGGAGT+AGG | - | chr5.4:64418067-64418086 | None:intergenic | 40.0% | |
| GGTATTCAGAAGCTAGATCA+AGG | + | chr5.4:64419369-64419388 | MS.gene80640:intron | 40.0% | |
| GTCATGATCCTTCAAAAGTG+CGG | + | chr5.4:64419422-64419441 | MS.gene80640:intron | 40.0% | |
| GTTTCAGTCACTGGAATGAT+GGG | + | chr5.4:64421436-64421455 | MS.gene80640:CDS | 40.0% | |
| TACCTCTGCAACTAAGGTTA+AGG | - | chr5.4:64419477-64419496 | None:intergenic | 40.0% | |
| TACTGATAGCAACTCTACGT+CGG | - | chr5.4:64420988-64421007 | None:intergenic | 40.0% | |
| TAGGTACTTGGGAATGCTAA+AGG | + | chr5.4:64421370-64421389 | MS.gene80640:intron | 40.0% | |
| TCATTCCAGTGACTGAAACT+GGG | - | chr5.4:64421435-64421454 | None:intergenic | 40.0% | |
| TCGATGTTGTTCCCAAATTG+CGG | + | chr5.4:64419505-64419524 | MS.gene80640:intron | 40.0% | |
| TCTACTTTACATGGCTCCAA+TGG | + | chr5.4:64420431-64420450 | MS.gene80640:CDS | 40.0% | |
| TCTTCCATATAGAGTGTAGC+AGG | - | chr5.4:64420474-64420493 | None:intergenic | 40.0% | |
| TGAATATACTGCCCTACTAC+AGG | - | chr5.4:64420879-64420898 | None:intergenic | 40.0% | |
| TGACACATGGTGAGGAAAAT+TGG | - | chr5.4:64418113-64418132 | None:intergenic | 40.0% | |
| TGCAATCGCTTGGTTCAAAA+TGG | + | chr5.4:64418163-64418182 | MS.gene80640:CDS | 40.0% | |
| TGTCGGTGATCACATATTGT+CGG | + | chr5.4:64418584-64418603 | MS.gene80640:intron | 40.0% | |
| TTGGAGCCATGTAAAGTAGA+AGG | - | chr5.4:64420431-64420450 | None:intergenic | 40.0% | |
| ! | GACATCCTTGTTGTGTCTTA+GGG | + | chr5.4:64420386-64420405 | MS.gene80640:intron | 40.0% |
| ! | GGATGAGCGAGTAGATATTT+TGG | + | chr5.4:64421249-64421268 | MS.gene80640:intron | 40.0% |
| ! | TGACATCCTTGTTGTGTCTT+AGG | + | chr5.4:64420385-64420404 | MS.gene80640:intron | 40.0% |
| ! | TGTGTGGTGTTCTCTGTTTT+TGG | + | chr5.4:64420075-64420094 | MS.gene80640:intron | 40.0% |
| ! | TGTTGTTGTTGTTGTTGGAG+TGG | + | chr5.4:64419835-64419854 | MS.gene80640:intron | 40.0% |
| !! | ACTGGTGTTATCATTGCTAG+TGG | + | chr5.4:64418413-64418432 | MS.gene80640:CDS | 40.0% |
| !! | AGGGGTATGGGAAATGTTTT+TGG | + | chr5.4:64418632-64418651 | MS.gene80640:intron | 40.0% |
| !! | CTGGTGTTATCATTGCTAGT+GGG | + | chr5.4:64418414-64418433 | MS.gene80640:CDS | 40.0% |
| !! | GCTCTAAAAACAGTGTTGCA+AGG | + | chr5.4:64420266-64420285 | MS.gene80640:CDS | 40.0% |
| !! | TGGTGTTATCATTGCTAGTG+GGG | + | chr5.4:64418415-64418434 | MS.gene80640:CDS | 40.0% |
| !!! | TACTACGCCGTTTTTTACTG+CGG | + | chr5.4:64418322-64418341 | MS.gene80640:CDS | 40.0% |
| AAATGTGATCGGCATCACGT+TGG | + | chr5.4:64420494-64420513 | MS.gene80640:CDS | 45.0% | |
| ACATGCTGTCATGTGACACA+TGG | - | chr5.4:64418126-64418145 | None:intergenic | 45.0% | |
| ACCTCTTGGAAAAGAGGTTC+AGG | + | chr5.4:64420819-64420838 | MS.gene80640:intron | 45.0% | |
| AGAAACCCAGTTTCAGTCAC+TGG | + | chr5.4:64421427-64421446 | MS.gene80640:CDS | 45.0% | |
| CAAAGTCCAAGACCGCAATT+TGG | - | chr5.4:64419520-64419539 | None:intergenic | 45.0% | |
| CAACTAAAAAGACAGCAGGC+AGG | - | chr5.4:64420708-64420727 | None:intergenic | 45.0% | |
| CCCCAAGTTCAGTTACATAC+TGG | - | chr5.4:64419279-64419298 | None:intergenic | 45.0% | |
| CCTCTTGGAAAAGAGGTTCA+GGG | + | chr5.4:64420820-64420839 | MS.gene80640:intron | 45.0% | |
| CGAGAACGCATGAATTGCAT+TGG | - | chr5.4:64418191-64418210 | None:intergenic | 45.0% | |
| CTTCTCCCTAAGACACAACA+AGG | - | chr5.4:64420394-64420413 | None:intergenic | 45.0% | |
| GATCCCTAAAGCCTGTAGTA+GGG | + | chr5.4:64420865-64420884 | MS.gene80640:intron | 45.0% | |
| GCAATTTGGGAACAACATCG+AGG | - | chr5.4:64419506-64419525 | None:intergenic | 45.0% | |
| GCACAGACATTTCTCGGATT+AGG | - | chr5.4:64419171-64419190 | None:intergenic | 45.0% | |
| GCATGGTACTCATCCAACAT+AGG | + | chr5.4:64418038-64418057 | MS.gene80640:CDS | 45.0% | |
| GCTCTTGTTCCTGTTGTTAC+TGG | + | chr5.4:64418395-64418414 | MS.gene80640:CDS | 45.0% | |
| GGACCAACTAAAAAGACAGC+AGG | - | chr5.4:64420712-64420731 | None:intergenic | 45.0% | |
| GGAGCTAGACTCCTGTTAAA+AGG | + | chr5.4:64419552-64419571 | MS.gene80640:intron | 45.0% | |
| GGTACTTGGGAATGCTAAAG+GGG | + | chr5.4:64421372-64421391 | MS.gene80640:intron | 45.0% | |
| GGTTATTCACTCACAGTCCT+TGG | + | chr5.4:64421457-64421476 | MS.gene80640:CDS | 45.0% | |
| TAGGAGTAGGACTCCTATGT+TGG | - | chr5.4:64418054-64418073 | None:intergenic | 45.0% | |
| TATAGAGTGTAGCAGGGAGA+AGG | - | chr5.4:64420467-64420486 | None:intergenic | 45.0% | |
| TCTAAGCACGGATACAGACA+CGG | + | chr5.4:64419022-64419041 | MS.gene80640:intron | 45.0% | |
| TCTCCCTGCTACACTCTATA+TGG | + | chr5.4:64420467-64420486 | MS.gene80640:CDS | 45.0% | |
| TGACGTTGAAGAGAGAAGCT+TGG | + | chr5.4:64418360-64418379 | MS.gene80640:CDS | 45.0% | |
| TTACCAATGCGTGTGAACCT+CGG | + | chr5.4:64418955-64418974 | MS.gene80640:intron | 45.0% | |
| TTGTTCCCAAATTGCGGTCT+TGG | + | chr5.4:64419511-64419530 | MS.gene80640:intron | 45.0% | |
| ! | AAAAGGGAGGCATACCTGAA+GGG | - | chr5.4:64420631-64420650 | None:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.4:64419806-64419825 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.4:64419807-64419826 | None:intergenic | 45.0% |
| !! | CATGTATACGGTGTTGACGT+TGG | + | chr5.4:64419202-64419221 | MS.gene80640:intron | 45.0% |
| !! | CTGCCTGCTGTCTTTTTAGT+TGG | + | chr5.4:64420706-64420725 | MS.gene80640:intron | 45.0% |
| !! | GAGTGGCTTGTTCAATGAGT+TGG | + | chr5.4:64419725-64419744 | MS.gene80640:intron | 45.0% |
| !! | TGTTGGTGTCGTGTCAGTAT+CGG | + | chr5.4:64419116-64419135 | MS.gene80640:intron | 45.0% |
| !! | TTCTGTGTCTCCGTCGTTTT+TGG | + | chr5.4:64418248-64418267 | MS.gene80640:CDS | 45.0% |
| !!! | GTGGTGTTCTCTGTTTTTGG+TGG | + | chr5.4:64420078-64420097 | MS.gene80640:intron | 45.0% |
| ACTGCCCTACTACAGGCTTT+AGG | - | chr5.4:64420872-64420891 | None:intergenic | 50.0% | |
| ATACAGACACGGACACAGCA+TGG | + | chr5.4:64419033-64419052 | MS.gene80640:intron | 50.0% | |
| CAAGTGCGGAATTGAACAGC+AGG | - | chr5.4:64420554-64420573 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.4:64419805-64419824 | MS.gene80640:intron | 50.0% | |
| CGGTGATCACATATTGTCGG+TGG | + | chr5.4:64418587-64418606 | MS.gene80640:intron | 50.0% | |
| CTGCCCTACTACAGGCTTTA+GGG | - | chr5.4:64420871-64420890 | None:intergenic | 50.0% | |
| CTGTCATGTGACACATGGTG+AGG | - | chr5.4:64418121-64418140 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.4:64419802-64419821 | None:intergenic | 50.0% | |
| GCCCTTAACCTTAGTTGCAG+AGG | + | chr5.4:64419472-64419491 | MS.gene80640:intron | 50.0% | |
| GGATCCCTAAAGCCTGTAGT+AGG | + | chr5.4:64420864-64420883 | MS.gene80640:intron | 50.0% | |
| TCAGCTACGTTGCAATCGCT+TGG | + | chr5.4:64418153-64418172 | MS.gene80640:CDS | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.4:64419808-64419827 | None:intergenic | 50.0% |
| ! | CCCTGAACCTCTTTTCCAAG+AGG | - | chr5.4:64420823-64420842 | None:intergenic | 50.0% |
| ! | GAAAAGGGAGGCATACCTGA+AGG | - | chr5.4:64420632-64420651 | None:intergenic | 50.0% |
| ! | GCAGTTCTCCGCACTTTTGA+AGG | - | chr5.4:64419433-64419452 | None:intergenic | 50.0% |
| ! | GTTAAGGGCACATATGCAGC+AGG | - | chr5.4:64419461-64419480 | None:intergenic | 50.0% |
| ! | TTCTCGGATTAGGCGTGTTC+CGG | - | chr5.4:64419161-64419180 | None:intergenic | 50.0% |
| !! | AAATTGCAGCAGCCGGCTTT+TGG | - | chr5.4:64421067-64421086 | None:intergenic | 50.0% |
| !! | GTTGGTGTCGTGTCAGTATC+GGG | + | chr5.4:64419117-64419136 | MS.gene80640:intron | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr5.4:64419794-64419813 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.4:64419793-64419812 | MS.gene80640:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.4:64419800-64419819 | MS.gene80640:intron | 55.0% | |
| GATCCGAGGTTCACACGCAT+TGG | - | chr5.4:64418961-64418980 | None:intergenic | 55.0% | |
| GATTAGGCGTGTTCCGGTGT+CGG | - | chr5.4:64419155-64419174 | None:intergenic | 55.0% | |
| TACCAGTGCTCTCACCCTTC+AGG | + | chr5.4:64420614-64420633 | MS.gene80640:CDS | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.4:64419794-64419813 | MS.gene80640:intron | 55.0% | |
| TTTCTCTCTCCTCGGATCCG+AGG | - | chr5.4:64418975-64418994 | None:intergenic | 55.0% | |
| ! | TACCTGAAGGGTGAGAGCAC+TGG | - | chr5.4:64420619-64420638 | None:intergenic | 55.0% |
| GCACGACACGTGTCCGACAC+CGG | + | chr5.4:64419139-64419158 | MS.gene80640:intron | 65.0% | |
| GCGTGTGAACCTCGGATCCG+AGG | + | chr5.4:64418963-64418982 | MS.gene80640:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 64417996 | 64421519 | 64417996 | ID=MS.gene80640 |
| chr5.4 | mRNA | 64417996 | 64421519 | 64417996 | ID=MS.gene80640.t1;Parent=MS.gene80640 |
| chr5.4 | exon | 64417996 | 64418436 | 64417996 | ID=MS.gene80640.t1.exon1;Parent=MS.gene80640.t1 |
| chr5.4 | CDS | 64417996 | 64418436 | 64417996 | ID=cds.MS.gene80640.t1;Parent=MS.gene80640.t1 |
| chr5.4 | exon | 64420206 | 64420309 | 64420206 | ID=MS.gene80640.t1.exon2;Parent=MS.gene80640.t1 |
| chr5.4 | CDS | 64420206 | 64420309 | 64420206 | ID=cds.MS.gene80640.t1;Parent=MS.gene80640.t1 |
| chr5.4 | exon | 64420407 | 64420635 | 64420407 | ID=MS.gene80640.t1.exon3;Parent=MS.gene80640.t1 |
| chr5.4 | CDS | 64420407 | 64420635 | 64420407 | ID=cds.MS.gene80640.t1;Parent=MS.gene80640.t1 |
| chr5.4 | exon | 64421373 | 64421519 | 64421373 | ID=MS.gene80640.t1.exon4;Parent=MS.gene80640.t1 |
| chr5.4 | CDS | 64421373 | 64421519 | 64421373 | ID=cds.MS.gene80640.t1;Parent=MS.gene80640.t1 |
| Gene Sequence |
| Protein sequence |
