AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80762

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80762.t1 MTR_4g021530 93.243 444 29 1 1 444 1 443 0.0 857
MS.gene80762.t1 MTR_4g021535 85.261 441 63 2 4 444 1 439 0.0 781
MS.gene80762.t1 MTR_4g021520 84.685 444 67 1 1 444 1 443 0.0 768
MS.gene80762.t1 MTR_4g021490 83.559 444 72 1 1 444 1 443 0.0 754
MS.gene80762.t1 MTR_4g021510 86.603 418 55 1 27 444 26 442 0.0 750
MS.gene80762.t1 MTR_4g021500 81.982 444 79 1 1 444 1 443 0.0 743
MS.gene80762.t1 MTR_4g021500 80.201 399 60 1 46 444 481 860 0.0 645
MS.gene80762.t1 MTR_4g021500 81.982 444 79 1 1 444 1 443 0.0 743
MS.gene80762.t1 MTR_4g021500 82.707 399 68 1 46 444 481 878 0.0 674
MS.gene80762.t1 MTR_4g021520 84.615 429 65 1 1 429 1 428 0.0 740
MS.gene80762.t1 MTR_4g021535 75.510 441 59 3 4 444 1 392 0.0 672
MS.gene80762.t1 MTR_3g100420 59.685 444 161 8 18 444 27 469 0.0 536
MS.gene80762.t1 MTR_2g018590 58.161 435 173 6 17 444 10 442 0.0 519
MS.gene80762.t1 MTR_2g018600 58.838 413 162 5 38 444 32 442 2.01e-173 494
MS.gene80762.t1 MTR_2g018630 58.010 412 160 6 38 444 35 438 1.76e-167 479
MS.gene80762.t1 MTR_2g018630 56.637 339 135 5 111 444 2 333 2.80e-128 375
MS.gene80762.t1 MTR_3g045770 42.105 437 230 10 15 444 7 427 3.88e-113 340
MS.gene80762.t1 MTR_8g011350 38.627 466 243 12 16 444 9 468 9.19e-104 317
MS.gene80762.t1 MTR_8g011350 38.627 466 243 12 16 444 9 468 1.60e-103 317
MS.gene80762.t1 MTR_7g080180 36.653 472 248 13 18 444 6 471 1.97e-102 314
MS.gene80762.t1 MTR_7g051430 37.209 473 247 13 14 445 6 469 4.39e-100 308
MS.gene80762.t1 MTR_7g080180 36.324 457 240 13 18 429 6 456 6.40e-97 299
MS.gene80762.t1 MTR_2g009200 38.776 441 223 8 15 444 8 412 2.35e-95 294
MS.gene80762.t1 MTR_7g051430 35.646 418 219 13 14 390 6 414 1.24e-75 242
MS.gene80762.t1 MTR_2g449850 30.505 436 254 16 28 444 29 434 1.38e-52 183
MS.gene80762.t1 MTR_3g434850 29.556 450 275 16 11 444 3 426 6.62e-51 179
MS.gene80762.t1 MTR_4g075150 30.238 420 271 14 34 444 29 435 1.32e-50 178
MS.gene80762.t1 MTR_2g012850 30.667 450 268 18 20 444 7 437 5.23e-50 176
MS.gene80762.t1 MTR_4g075150 30.072 419 271 13 34 444 29 433 6.31e-50 176
MS.gene80762.t1 MTR_1g021010 30.735 449 268 17 7 444 42 458 5.85e-49 174
MS.gene80762.t1 MTR_2g012860 30.714 420 260 15 40 444 42 445 3.95e-48 172
MS.gene80762.t1 MTR_2g063000 28.675 415 262 14 43 444 42 435 5.20e-48 171
MS.gene80762.t1 MTR_2g062980 28.409 440 280 15 18 444 17 434 1.23e-47 170
MS.gene80762.t1 MTR_4g089155 31.354 421 256 17 40 444 54 457 1.68e-47 170
MS.gene80762.t1 MTR_2g062990 29.126 412 262 13 43 444 43 434 3.70e-47 169
MS.gene80762.t1 MTR_0003s0560 29.904 418 254 14 37 444 71 459 1.68e-46 167
MS.gene80762.t1 MTR_3g034290 28.230 418 263 13 37 444 72 462 2.23e-46 167
MS.gene80762.t1 MTR_8g099930 28.733 442 267 18 22 444 22 434 2.41e-46 167
MS.gene80762.t1 MTR_3g498755 28.103 427 263 17 39 444 14 417 3.26e-46 166
MS.gene80762.t1 MTR_1g021020 29.556 450 271 16 7 444 44 459 5.70e-46 166
MS.gene80762.t1 MTR_1g020090 31.931 404 235 13 39 434 89 460 6.50e-46 166
MS.gene80762.t1 MTR_3g090150 28.070 456 270 19 18 444 9 435 1.12e-45 165
MS.gene80762.t1 MTR_2g081620 28.434 415 261 14 43 444 44 435 1.61e-45 164
MS.gene80762.t1 MTR_4g122960 28.982 452 284 16 16 444 10 447 2.55e-45 164
MS.gene80762.t1 MTR_4g122950 28.603 451 289 16 16 444 10 449 4.68e-45 164
MS.gene80762.t1 MTR_3g079560 28.777 417 255 15 39 444 77 462 3.43e-44 161
MS.gene80762.t1 MTR_3g079590 29.302 430 260 16 28 444 64 462 5.26e-44 161
MS.gene80762.t1 MTR_1g095540 27.640 445 280 15 18 444 8 428 8.25e-44 159
MS.gene80762.t1 MTR_3g079570 29.302 430 259 15 28 444 65 462 9.97e-44 160
MS.gene80762.t1 MTR_7g021130 26.682 446 287 15 16 444 7 429 1.66e-43 159
MS.gene80762.t1 MTR_3g090130 26.698 427 264 16 40 444 29 428 3.67e-43 158
MS.gene80762.t1 MTR_5g072570 27.373 453 277 19 17 444 8 433 5.84e-43 157
MS.gene80762.t1 MTR_1g095560 28.989 445 274 15 18 444 8 428 6.28e-43 157
MS.gene80762.t1 MTR_7g013790 28.605 423 274 15 34 444 30 436 4.78e-42 155
MS.gene80762.t1 MTR_1g040370 28.090 445 238 17 14 444 11 387 7.29e-42 153
MS.gene80762.t1 MTR_3g079620 27.517 447 276 15 17 444 53 470 3.30e-41 153
MS.gene80762.t1 MTR_3g079600 29.002 431 257 18 31 444 65 463 1.83e-40 151
MS.gene80762.t1 MTR_1g095560 29.070 430 264 14 18 429 8 414 4.87e-40 150
MS.gene80762.t1 MTR_2g063000 27.184 412 241 15 43 444 42 404 2.04e-38 144
MS.gene80762.t1 MTR_4g057600 28.191 376 234 8 69 434 109 458 3.75e-38 145
MS.gene80762.t1 MTR_3g079630 28.054 442 258 18 28 444 64 470 2.48e-37 142
MS.gene80762.t1 MTR_1g050545 29.058 382 226 13 69 435 97 448 5.48e-36 139
MS.gene80762.t1 MTR_0003s0560 32.584 267 165 8 37 299 71 326 1.99e-33 129
MS.gene80762.t1 MTR_4g057585 26.866 402 233 13 55 434 97 459 7.03e-33 130
MS.gene80762.t1 MTR_3g034290 28.358 335 205 12 37 363 72 379 9.75e-33 128
MS.gene80762.t1 MTR_4g057570 27.624 362 208 12 69 413 103 427 1.08e-32 129
MS.gene80762.t1 MTR_4g057595 27.062 388 223 12 69 434 111 460 1.96e-32 129
MS.gene80762.t1 MTR_2g095750 27.513 378 235 12 69 434 114 464 3.14e-32 128
MS.gene80762.t1 MTR_1g102130 26.959 434 241 17 32 444 84 462 1.10e-31 127
MS.gene80762.t1 MTR_1g094155 28.771 358 208 13 69 413 104 427 2.68e-31 125
MS.gene80762.t1 MTR_2g095730 39.877 163 91 5 69 229 108 265 8.90e-29 119
MS.gene80762.t1 MTR_5g097180 25.428 409 252 16 46 436 30 403 1.16e-27 115
MS.gene80762.t1 MTR_2g018650 49.091 110 49 2 329 435 17 122 6.13e-25 99.4
MS.gene80762.t1 MTR_4g084710 25.628 398 242 15 56 436 45 405 3.62e-21 95.9
MS.gene80762.t1 MTR_2g095710 26.076 395 241 16 32 413 65 421 2.70e-19 90.5
MS.gene80762.t1 MTR_0075s0010 25.000 388 192 16 39 410 7 311 1.22e-18 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80762.t1 AT5G09640 51.591 440 192 10 18 444 8 439 3.26e-153 443
MS.gene80762.t1 AT2G22920 52.899 414 165 6 36 444 21 409 3.17e-151 437
MS.gene80762.t1 AT2G22970 52.163 416 171 5 35 447 20 410 1.27e-150 434
MS.gene80762.t1 AT2G23010 50.930 430 189 6 18 445 3 412 4.63e-150 434
MS.gene80762.t1 AT2G22970 52.415 414 169 5 35 445 20 408 5.25e-150 434
MS.gene80762.t1 AT2G23010 51.049 429 188 6 18 444 3 411 1.07e-149 433
MS.gene80762.t1 AT2G22970 52.542 413 168 5 35 444 20 407 1.61e-149 432
MS.gene80762.t1 AT1G33540 51.544 421 185 9 36 444 25 438 4.80e-148 430
MS.gene80762.t1 AT3G12203 52.530 415 168 6 33 444 2 390 1.04e-147 427
MS.gene80762.t1 AT3G12203 51.522 427 178 6 21 444 11 411 2.38e-147 427
MS.gene80762.t1 AT2G23000 51.825 411 176 6 36 444 21 411 1.90e-146 425
MS.gene80762.t1 AT2G23000 51.825 411 176 6 36 444 21 411 1.90e-146 425
MS.gene80762.t1 AT2G22980 50.481 416 172 7 36 447 22 407 6.75e-146 422
MS.gene80762.t1 AT2G22980 50.725 414 170 7 36 445 22 405 2.95e-145 421
MS.gene80762.t1 AT2G22980 50.847 413 169 7 36 444 22 404 5.06e-145 421
MS.gene80762.t1 AT3G10450 50.843 415 176 6 36 447 25 414 6.91e-145 420
MS.gene80762.t1 AT1G73300 51.699 412 171 6 36 444 29 415 9.01e-145 421
MS.gene80762.t1 AT1G73300 51.699 412 171 6 36 444 29 415 9.01e-145 421
MS.gene80762.t1 AT3G12240 50.485 412 176 6 36 444 24 410 2.36e-144 419
MS.gene80762.t1 AT1G73280 51.090 413 174 6 35 444 28 415 2.95e-144 419
MS.gene80762.t1 AT3G10450 51.214 412 173 6 36 444 25 411 8.01e-144 418
MS.gene80762.t1 AT1G73270 51.942 412 170 6 36 444 29 415 1.23e-143 418
MS.gene80762.t1 AT1G73270 51.942 412 170 6 36 444 29 415 1.52e-143 418
MS.gene80762.t1 AT2G22990 49.517 414 185 6 36 447 19 410 5.00e-143 417
MS.gene80762.t1 AT2G22990 49.637 413 184 6 36 446 19 409 8.61e-143 415
MS.gene80762.t1 AT2G22990 49.878 411 182 6 36 444 19 407 3.52e-142 414
MS.gene80762.t1 AT3G12220 51.456 412 172 7 36 444 23 409 1.45e-141 412
MS.gene80762.t1 AT2G22920 51.750 400 163 6 36 430 21 395 3.27e-141 410
MS.gene80762.t1 AT5G36180 50.728 412 175 6 36 444 29 415 1.03e-140 410
MS.gene80762.t1 AT1G73290 50.728 412 173 7 36 444 28 412 2.55e-140 409
MS.gene80762.t1 AT1G73310 50.608 411 175 6 36 443 29 414 2.65e-139 407
MS.gene80762.t1 AT3G12230 48.786 412 183 6 36 444 23 409 3.08e-138 404
MS.gene80762.t1 AT1G33540 50.877 399 177 9 58 444 4 395 2.09e-137 401
MS.gene80762.t1 AT2G22990 48.786 412 178 7 36 445 19 399 3.29e-136 398
MS.gene80762.t1 AT1G73310 50.000 402 173 6 36 434 29 405 7.50e-134 392
MS.gene80762.t1 AT1G73290 50.251 398 168 7 36 430 28 398 1.95e-132 388
MS.gene80762.t1 AT3G10450 49.364 393 171 6 58 447 4 371 3.06e-132 386
MS.gene80762.t1 AT3G10450 49.744 390 168 6 58 444 4 368 2.81e-131 384
MS.gene80762.t1 AT3G12203 51.323 378 156 5 70 444 1 353 6.58e-130 380
MS.gene80762.t1 AT3G12220 50.256 390 166 7 58 444 15 379 1.27e-128 378
MS.gene80762.t1 AT1G73280 49.304 359 154 6 35 390 28 361 6.54e-114 340
MS.gene80762.t1 AT2G22980 48.476 361 150 8 36 390 22 352 1.65e-111 332
MS.gene80762.t1 AT2G22920 51.724 319 127 5 36 352 21 314 2.14e-107 321
MS.gene80762.t1 AT2G22970 50.784 319 131 4 35 352 20 313 9.71e-106 317
MS.gene80762.t1 AT1G73280 49.096 332 142 5 116 444 6 313 1.90e-103 311
MS.gene80762.t1 AT4G12910 38.362 464 240 13 18 444 16 470 3.18e-103 316
MS.gene80762.t1 AT5G36180 47.941 340 150 5 111 447 1 316 3.25e-103 310
MS.gene80762.t1 AT5G36180 48.368 337 147 5 111 444 1 313 2.56e-102 308
MS.gene80762.t1 AT5G36180 48.368 337 147 5 111 444 1 313 2.56e-102 308
MS.gene80762.t1 AT4G12910 38.085 449 232 13 18 429 16 455 6.79e-97 298
MS.gene80762.t1 AT1G73290 54.753 263 114 4 36 296 28 287 2.63e-96 292
MS.gene80762.t1 AT2G22990 46.984 315 144 5 133 445 1 294 1.57e-95 290
MS.gene80762.t1 AT2G22980 46.395 319 138 6 133 447 1 290 2.33e-95 289
MS.gene80762.t1 AT2G22990 47.134 314 143 5 133 444 1 293 3.21e-95 290
MS.gene80762.t1 AT3G25420 36.966 468 246 14 16 444 10 467 1.03e-94 294
MS.gene80762.t1 AT1G73280 47.756 312 136 5 136 444 1 288 1.66e-93 285
MS.gene80762.t1 AT1G73310 46.933 326 146 5 112 434 2 303 2.73e-93 285
MS.gene80762.t1 AT5G36180 47.205 322 143 5 111 429 1 298 1.76e-92 283
MS.gene80762.t1 AT3G12220 54.918 244 103 4 36 277 23 261 9.18e-85 265
MS.gene80762.t1 AT3G12220 51.261 119 57 1 327 444 239 357 3.73e-33 129
MS.gene80762.t1 AT2G22920 48.413 252 102 4 197 444 3 230 6.94e-77 240
MS.gene80762.t1 AT3G52000 29.343 426 262 12 30 444 54 451 4.93e-52 182
MS.gene80762.t1 AT5G08260 30.626 431 251 13 40 444 40 448 8.72e-52 182
MS.gene80762.t1 AT4G15100 30.464 453 283 15 11 444 14 453 9.31e-52 182
MS.gene80762.t1 AT3G52020 30.024 423 256 13 34 443 74 469 1.14e-51 182
MS.gene80762.t1 AT1G61130 31.166 446 263 15 19 444 11 432 3.38e-51 179
MS.gene80762.t1 AT3G52010 29.330 433 237 15 40 444 65 456 2.58e-50 178
MS.gene80762.t1 AT5G23210 30.337 445 262 17 30 444 41 467 1.06e-49 176
MS.gene80762.t1 AT2G05850 29.953 424 247 15 40 444 64 456 2.30e-48 172
MS.gene80762.t1 AT4G30810 28.404 426 267 13 34 444 32 434 1.05e-47 171
MS.gene80762.t1 AT5G23210 30.118 425 250 16 33 427 44 451 3.88e-47 169
MS.gene80762.t1 AT2G33530 29.032 434 268 18 29 444 23 434 3.40e-46 166
MS.gene80762.t1 AT4G30610 28.000 425 275 15 34 444 27 434 4.77e-46 166
MS.gene80762.t1 AT1G28110 28.638 426 258 18 39 444 31 430 1.57e-45 164
MS.gene80762.t1 AT1G28110 28.638 426 258 18 39 444 31 430 1.57e-45 164
MS.gene80762.t1 AT1G43780 29.002 431 254 18 40 444 38 442 5.57e-45 163
MS.gene80762.t1 AT3G17180 29.773 440 268 16 28 444 26 447 5.58e-45 163
MS.gene80762.t1 AT1G11080 30.490 469 271 20 10 444 14 461 3.35e-44 161
MS.gene80762.t1 AT1G11080 30.490 469 271 20 10 444 14 461 3.78e-44 161
MS.gene80762.t1 AT2G35780 29.070 430 254 17 34 443 24 422 5.64e-44 160
MS.gene80762.t1 AT2G35770 27.865 445 287 11 14 445 8 431 6.20e-43 157
MS.gene80762.t1 AT3G17180 29.812 426 258 16 28 430 26 433 1.01e-41 154
MS.gene80762.t1 AT3G63470 27.208 419 266 12 37 444 79 469 1.09e-41 155
MS.gene80762.t1 AT3G07990 27.381 420 276 13 34 443 28 428 1.91e-41 153
MS.gene80762.t1 AT2G12480 27.791 421 265 14 40 444 32 429 4.30e-41 152
MS.gene80762.t1 AT2G24010 27.896 423 269 15 34 444 25 423 7.05e-41 152
MS.gene80762.t1 AT2G24000 26.714 423 284 12 34 444 25 433 1.12e-40 151
MS.gene80762.t1 AT3G02110 28.638 426 275 15 34 444 32 443 1.10e-39 149
MS.gene80762.t1 AT5G42230 28.205 429 259 16 40 444 29 432 1.12e-39 149
MS.gene80762.t1 AT5G42230 28.205 429 259 16 40 444 29 432 1.12e-39 149
MS.gene80762.t1 AT2G22960 56.250 112 48 1 334 444 47 158 2.68e-39 140
MS.gene80762.t1 AT5G42240 27.166 427 266 16 40 444 33 436 3.73e-39 147
MS.gene80762.t1 AT2G12480 26.859 417 250 12 40 444 32 405 5.92e-39 146
MS.gene80762.t1 AT2G12480 27.014 422 241 13 40 444 32 403 9.21e-39 145
MS.gene80762.t1 AT2G12480 26.950 423 241 14 40 444 32 404 4.15e-37 141
MS.gene80762.t1 AT2G24010 26.712 438 270 16 34 444 25 438 4.97e-36 139
MS.gene80762.t1 AT5G22980 29.517 393 206 16 69 434 112 460 1.81e-35 137
MS.gene80762.t1 AT5G23210 28.385 384 230 14 90 444 5 372 5.12e-35 134
MS.gene80762.t1 AT5G23210 28.421 380 227 14 94 444 8 371 3.29e-34 132
MS.gene80762.t1 AT3G45010 28.796 382 225 14 69 434 115 465 1.00e-33 133
MS.gene80762.t1 AT2G24010 25.383 457 265 17 40 444 2 434 1.22e-31 126
MS.gene80762.t1 AT5G23210 28.099 363 217 13 94 427 8 355 1.66e-31 124
MS.gene80762.t1 AT3G10410 27.865 384 222 15 70 434 114 461 3.10e-30 123
MS.gene80762.t1 AT3G56540 35.583 163 96 4 34 194 74 229 4.28e-27 109
MS.gene80762.t1 AT5G22960 34.337 166 82 4 55 219 35 174 1.17e-23 98.2
MS.gene80762.t1 AT2G24010 25.661 378 231 15 40 390 2 356 2.68e-23 100
MS.gene80762.t1 AT1G15000 24.096 415 243 15 41 436 31 392 2.02e-20 93.6
MS.gene80762.t1 AT2G24000 24.521 261 180 8 193 444 118 370 3.70e-14 74.3

Find 104 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTAAACATAACTCATTTC+TGG 0.149491 4.4:+80381229 None:intergenic
TCATTATTCTTGTAGGATTA+TGG 0.186542 4.4:-80380855 MS.gene80762:intron
CCTCTTATGCTTTGGATATC+TGG 0.239213 4.4:-80383790 MS.gene80762:CDS
AATTCATTTGAAAGAAATTC+AGG 0.250211 4.4:+80382044 None:intergenic
TGTCAGATACTACTTGTTCT+TGG 0.278811 4.4:-80384175 MS.gene80762:CDS
TCTGCCCTTGCCTTTCAAAT+AGG 0.282289 4.4:-80383745 MS.gene80762:intron
TACTCGGTGGCAGCTTAATT+CGG 0.294569 4.4:+80380951 None:intergenic
TGGAGGTCATGGTTTGTAAA+TGG 0.296323 4.4:-80379737 MS.gene80762:CDS
ACAATACTCATCAATTTCTT+AGG 0.296386 4.4:-80382364 MS.gene80762:CDS
ACTCGGTGGCAGCTTAATTC+GGG 0.315230 4.4:+80380952 None:intergenic
TCAAAGGTTGAACACCTTCC+TGG 0.328312 4.4:-80384109 MS.gene80762:CDS
ATCTTCTTTGTATGTTGTCC+AGG 0.338537 4.4:+80381478 None:intergenic
TTTGATAGGTACGTAGGGTT+AGG 0.341532 4.4:-80383880 MS.gene80762:intron
CAACGGGAGCTTGCCAAGTT+TGG 0.343670 4.4:-80382605 MS.gene80762:CDS
ATTTGAAATTTCTTGAAGAA+TGG 0.349539 4.4:+80381980 None:intergenic
CCAGATATCCAAAGCATAAG+AGG 0.396507 4.4:+80383790 None:intergenic
AGTCTACTCAAGCATGGATA+AGG 0.396605 4.4:-80379787 MS.gene80762:CDS
TTTGAAATTTCTTGAAGAAT+GGG 0.397349 4.4:+80381981 None:intergenic
GTAGATTTGCCACTTGGAAC+TGG 0.409499 4.4:-80382440 MS.gene80762:CDS
TCTTATCTTCAGTGTCTCTC+AGG 0.412551 4.4:-80381084 MS.gene80762:intron
TTGATAGGTACGTAGGGTTA+GGG 0.418536 4.4:-80383879 MS.gene80762:intron
AGTCCCATTCCATGAGCATA+TGG 0.428352 4.4:+80381443 None:intergenic
CTCATCGCCAATCCATTTAG+TGG 0.435477 4.4:+80380821 None:intergenic
CACCCAGTTTCAAGTTCAAA+AGG 0.437262 4.4:+80384070 None:intergenic
TCCATTTGCATTCGAAATCA+AGG 0.439918 4.4:-80382632 MS.gene80762:CDS
TTATCCATGCTTGAGTAGAC+TGG 0.441545 4.4:+80379789 None:intergenic
CTTTGGATATCTGGTGGTCC+TGG 0.444201 4.4:-80383781 MS.gene80762:CDS
TCCTTGATTTCGAATGCAAA+TGG 0.445940 4.4:+80382631 None:intergenic
TCTTCTTTGTATGTTGTCCA+GGG 0.447744 4.4:+80381479 None:intergenic
TCTTGAAGAATGGGTGGGAC+AGG 0.449434 4.4:+80381990 None:intergenic
GAGGAGGAGATCTTTGACTC+AGG 0.456155 4.4:-80381010 MS.gene80762:CDS
ATCCCATATGCTCATGGAAT+GGG 0.456289 4.4:-80381446 MS.gene80762:CDS
CCAGCCATTGATAAATCTCC+AGG 0.462785 4.4:-80381647 MS.gene80762:intron
TCACAGTTGCATATGTCATT+CGG 0.463136 4.4:+80379313 None:intergenic
TTTGTAAATGGCCAAGTGGC+AGG 0.464071 4.4:-80379725 MS.gene80762:CDS
TCAAGGATTACCGGAGCGAC+TGG 0.464927 4.4:-80382397 MS.gene80762:CDS
ATTCTTCAAGAAATTTCAAA+TGG 0.466021 4.4:-80381978 MS.gene80762:intron
TGAAGTGAAGTATGAGAAGG+AGG 0.469095 4.4:+80384205 None:intergenic
GATACCGCTCTTTGATATAC+AGG 0.469317 4.4:-80380560 MS.gene80762:intron
ATTCATTTGAAAGAAATTCA+GGG 0.472682 4.4:+80382045 None:intergenic
TTTAAAATTACCTATTTGAA+AGG 0.473687 4.4:+80383735 None:intergenic
GTCTACTCAAGCATGGATAA+GGG 0.478662 4.4:-80379786 MS.gene80762:CDS
CTTTCAAATGAATTCTACAT+TGG 0.479014 4.4:-80382035 MS.gene80762:CDS
TCGAAATCAAGGAGTACAAC+GGG 0.484158 4.4:-80382621 MS.gene80762:CDS
TACCTCGCCACTAAATGGAT+TGG 0.488687 4.4:-80380828 MS.gene80762:CDS
ACTACTCCATTGTAGAGGAT+TGG 0.490438 4.4:-80379757 MS.gene80762:CDS
ACATCGTTCCCATGTTCCTA+TGG 0.492158 4.4:+80380650 None:intergenic
AATTACCTATTTGAAAGGCA+AGG 0.496169 4.4:+80383740 None:intergenic
CCTGGAGATTTATCAATGGC+TGG 0.503976 4.4:+80381647 None:intergenic
ATTACCTATTTGAAAGGCAA+GGG 0.513117 4.4:+80383741 None:intergenic
TCTTGAAGCTTCTCGCTCAA+AGG 0.514031 4.4:-80384125 MS.gene80762:CDS
GCTTGCCAAGTTTGGTCTCA+AGG 0.518175 4.4:-80382597 MS.gene80762:CDS
TATCAAATCCCATATGCTCA+TGG 0.523634 4.4:-80381452 MS.gene80762:CDS
ATTGGAGCTGATTCATACTC+TGG 0.524669 4.4:-80382017 MS.gene80762:CDS
GAAATTTCTTGAAGAATGGG+TGG 0.526267 4.4:+80381984 None:intergenic
GATATCTGCTAGGGAACCCC+TGG 0.529043 4.4:-80381496 MS.gene80762:CDS
GGTAGTGGCCCTTGAAAACC+AGG 0.530817 4.4:+80384091 None:intergenic
ACTCCATTGTAGAGGATTGG+AGG 0.531320 4.4:-80379754 MS.gene80762:CDS
TTGTAGAGGATTGGAGGTCA+TGG 0.531519 4.4:-80379748 MS.gene80762:CDS
TGTGGCCTTGAGACCAAACT+TGG 0.532564 4.4:+80382592 None:intergenic
TACTCATCAATTTCTTAGGA+AGG 0.541108 4.4:-80382360 MS.gene80762:intron
GAAACCTGGAGATTTATCAA+TGG 0.542306 4.4:+80381643 None:intergenic
TTGATGCTTACCCTGCCACT+TGG 0.544360 4.4:+80379714 None:intergenic
TAGTGAAGTGAAGTATGAGA+AGG 0.547701 4.4:+80384202 None:intergenic
CTTTCCAGTCTACTCAAGCA+TGG 0.548970 4.4:-80379793 MS.gene80762:CDS
GAACTAGTTTCCAGTCGCTC+CGG 0.549110 4.4:+80382387 None:intergenic
CTTCTTTGTATGTTGTCCAG+GGG 0.549977 4.4:+80381480 None:intergenic
GTTTCAAGTTCAAAAGGTAG+TGG 0.558447 4.4:+80384076 None:intergenic
CTATATTTGATAGGTACGTA+GGG 0.559013 4.4:-80383885 MS.gene80762:intron
TGATCCATGTAGGGTACCAT+AGG 0.561198 4.4:-80380666 MS.gene80762:intron
GTCCCATTCCATGAGCATAT+GGG 0.561598 4.4:+80381444 None:intergenic
TCTATATTTGATAGGTACGT+AGG 0.561954 4.4:-80383886 MS.gene80762:intron
CGCCAATCCATTTAGTGGCG+AGG 0.564679 4.4:+80380826 None:intergenic
AATCCCATATGCTCATGGAA+TGG 0.565898 4.4:-80381447 MS.gene80762:CDS
AAATTTCTTGAAGAATGGGT+GGG 0.570274 4.4:+80381985 None:intergenic
TGGTCTCAAGGCCACAGTCA+TGG 0.575907 4.4:-80382585 MS.gene80762:CDS
GTAAAGATGATTTGCGTCTG+AGG 0.579279 4.4:-80381029 MS.gene80762:CDS
TTGTAAATGGCCAAGTGGCA+GGG 0.585846 4.4:-80379724 MS.gene80762:intron
CAAGGCACTGCATATTCGAG+AGG 0.592389 4.4:-80380790 MS.gene80762:intron
CTTATGCTTTGGATATCTGG+TGG 0.593649 4.4:-80383787 MS.gene80762:CDS
TGTAGGGTACCATAGGAACA+TGG 0.596098 4.4:-80380659 MS.gene80762:intron
TTTGAGCGAGAAGCTTCAAG+AGG 0.599026 4.4:+80384127 None:intergenic
TCCTTTAACGCAGATACACA+AGG 0.603964 4.4:-80379347 MS.gene80762:intron
TGATAGGTACGTAGGGTTAG+GGG 0.610714 4.4:-80383878 MS.gene80762:intron
TGGCGATGAGAGTGTTCGCA+AGG 0.614074 4.4:-80380808 MS.gene80762:CDS
CTCGGTGGCAGCTTAATTCG+GGG 0.618560 4.4:+80380953 None:intergenic
CATGCTTGAGTAGACTGGAA+AGG 0.623570 4.4:+80379794 None:intergenic
AGATCTTCAATACTTTGATG+AGG 0.630003 4.4:-80381207 MS.gene80762:intron
CAGATATCCAAAGCATAAGA+GGG 0.630802 4.4:+80383791 None:intergenic
AAGATGATTTGCGTCTGAGG+AGG 0.631535 4.4:-80381026 MS.gene80762:CDS
TAGATTTGCATGAAACTCAA+CGG 0.634251 4.4:+80380593 None:intergenic
TGACCTCCAATCCTCTACAA+TGG 0.636868 4.4:+80379751 None:intergenic
TCTAAACTACTCCATTGTAG+AGG 0.650182 4.4:-80379762 MS.gene80762:CDS
TTCGAAATCAAGGAGTACAA+CGG 0.650200 4.4:-80382622 MS.gene80762:CDS
AACACCTTTGTCCATGACTG+TGG 0.650204 4.4:+80382574 None:intergenic
AATGACATATGCAACTGTGA+AGG 0.662682 4.4:-80379310 MS.gene80762:intron
AAGGCCACAGTCATGGACAA+AGG 0.663274 4.4:-80382578 MS.gene80762:intron
GTAGGGTACCATAGGAACAT+GGG 0.671970 4.4:-80380658 MS.gene80762:intron
TTCACCTGTATATCAAAGAG+CGG 0.675900 4.4:+80380556 None:intergenic
GCTTGCAAAGATGAACATGA+TGG 0.680214 4.4:-80384230 None:intergenic
ATGGTTTGTAAATGGCCAAG+TGG 0.682748 4.4:-80379729 MS.gene80762:CDS
GTGGCCCTTGAAAACCAGGA+AGG 0.685304 4.4:+80384095 None:intergenic
TATGAGAAACCAGTTCCAAG+TGG 0.692436 4.4:+80382431 None:intergenic
CATCTCTGATGAACTCTACG+CGG 0.712916 4.4:-80381420 MS.gene80762:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGATTAAGAAAATTTA+TGG + chr4.4:80380996-80381015 None:intergenic 10.0%
!! TAATGTTTATAATTATCTAT+TGG - chr4.4:80380374-80380393 MS.gene80762:intron 10.0%
!! TTTATAATTATATAATGATC+AGG - chr4.4:80380967-80380986 MS.gene80762:CDS 10.0%
!!! ATTAAACATTATTTTTGTTT+TGG - chr4.4:80379457-80379476 MS.gene80762:intron 10.0%
!! ATAATAGGTATAGATAAAAT+TGG + chr4.4:80381691-80381710 None:intergenic 15.0%
!! ATGAATTGTTCAAAATATTA+AGG + chr4.4:80384095-80384114 None:intergenic 15.0%
!! ATTACATGAAAATTGATATA+AGG + chr4.4:80383678-80383697 None:intergenic 15.0%
!! TAATAGGTATAGATAAAATT+GGG + chr4.4:80381690-80381709 None:intergenic 15.0%
!! TACATAAATGACTAAAAAAA+TGG + chr4.4:80379378-80379397 None:intergenic 15.0%
!! TGAATTGTTCAAAATATTAA+GGG + chr4.4:80384094-80384113 None:intergenic 15.0%
!! TTAAAATAGATATAAACTAG+AGG + chr4.4:80382505-80382524 None:intergenic 15.0%
!! TTATATAAAGTTGACAAAAA+AGG + chr4.4:80382638-80382657 None:intergenic 15.0%
!!! AAAAAATCAATTAGTCTTAA+GGG + chr4.4:80382998-80383017 None:intergenic 15.0%
!!! AAACTTAATTTAAGTCATTT+TGG - chr4.4:80380591-80380610 MS.gene80762:CDS 15.0%
!!! ACAAATAAAAAAGTATATAC+CGG + chr4.4:80378884-80378903 None:intergenic 15.0%
!!! TAAAAAATCAATTAGTCTTA+AGG + chr4.4:80382999-80383018 None:intergenic 15.0%
!!! TAAGACTAATTGATTTTTTA+TGG - chr4.4:80382999-80383018 MS.gene80762:intron 15.0%
!!! TATTTAGATTAATTTTTCGT+CGG + chr4.4:80381273-80381292 None:intergenic 15.0%
!!! TTAAATCTTGAATTATTTTG+AGG - chr4.4:80382690-80382709 MS.gene80762:intron 15.0%
!!! TTAGTTCTTATTAAAAACTT+TGG + chr4.4:80380357-80380376 None:intergenic 15.0%
!!! TTTAAAATTACCTATTTGAA+AGG + chr4.4:80379127-80379146 None:intergenic 15.0%
!!! TTTTTAAAACATTGATATGA+AGG + chr4.4:80383171-80383190 None:intergenic 15.0%
!! AAAAAAAATGTGAATCCTAT+GGG + chr4.4:80379759-80379778 None:intergenic 20.0%
!! AAAACGTTTAGCATATTAAA+GGG - chr4.4:80381078-80381097 MS.gene80762:intron 20.0%
!! AAACAAACAGAAATGTAAAA+AGG - chr4.4:80383845-80383864 MS.gene80762:CDS 20.0%
!! AAGCTATGAAAAAAATTACT+CGG + chr4.4:80381927-80381946 None:intergenic 20.0%
!! AATGATACATTTGAATGAAT+TGG + chr4.4:80380076-80380095 None:intergenic 20.0%
!! AATTCATTTGAAAGAAATTC+AGG + chr4.4:80380818-80380837 None:intergenic 20.0%
!! ACAAAATGTACAAACTAAAT+TGG + chr4.4:80381476-80381495 None:intergenic 20.0%
!! ACAAGAAAATAATAATGTCA+AGG - chr4.4:80383868-80383887 MS.gene80762:CDS 20.0%
!! AGAAACATTGATAAAGAAAA+AGG + chr4.4:80378833-80378852 None:intergenic 20.0%
!! AGTATGATATGCAATATAAA+TGG - chr4.4:80378942-80378961 MS.gene80762:intron 20.0%
!! ATAAAGAAAAAGGAATGATT+AGG + chr4.4:80378823-80378842 None:intergenic 20.0%
!! ATAATTATATAATGATCAGG+AGG - chr4.4:80380970-80380989 MS.gene80762:CDS 20.0%
!! ATGATACATTTGAATGAATT+GGG + chr4.4:80380075-80380094 None:intergenic 20.0%
!! ATTATAGAGGAAAGAAAAAA+TGG + chr4.4:80384201-80384220 None:intergenic 20.0%
!! ATTCATTTGAAAGAAATTCA+GGG + chr4.4:80380817-80380836 None:intergenic 20.0%
!! ATTCTTCAAGAAATTTCAAA+TGG - chr4.4:80380881-80380900 MS.gene80762:intron 20.0%
!! ATTTATGTATAAGTATCTTG+TGG - chr4.4:80379389-80379408 MS.gene80762:intron 20.0%
!! CTTTGTTCAATATTTACTTT+AGG - chr4.4:80380692-80380711 MS.gene80762:intron 20.0%
!! GACGAAAAATTAATCTAAAT+AGG - chr4.4:80381272-80381291 MS.gene80762:CDS 20.0%
!! TATCTATACCTATTATAAAG+AGG - chr4.4:80381695-80381714 MS.gene80762:intron 20.0%
!! TTAAGAAAAAACAGTCAATT+TGG - chr4.4:80383613-80383632 MS.gene80762:intron 20.0%
!! TTATAGAGGAAAGAAAAAAT+GGG + chr4.4:80384200-80384219 None:intergenic 20.0%
!!! AAAAAGCACAATTTTTAAGA+TGG - chr4.4:80380915-80380934 MS.gene80762:intron 20.0%
!!! AAAAGCACAATTTTTAAGAT+GGG - chr4.4:80380916-80380935 MS.gene80762:intron 20.0%
!!! ATAATTTTTTAGAGTGAGAT+TGG - chr4.4:80384216-80384235 MS.gene80762:CDS 20.0%
!!! ATTTAGTTTGTACATTTTGT+CGG - chr4.4:80381476-80381495 MS.gene80762:CDS 20.0%
!!! ATTTGAAATTTCTTGAAGAA+TGG + chr4.4:80380882-80380901 None:intergenic 20.0%
!!! CAATTTTTTAAATATTGGAC+CGG + chr4.4:80383445-80383464 None:intergenic 20.0%
!!! GATATTTGTGAAGATATTTT+AGG - chr4.4:80381531-80381550 MS.gene80762:intron 20.0%
!!! GGAAGCAATTTTTTAAATAT+TGG + chr4.4:80383450-80383469 None:intergenic 20.0%
!!! TCTATTCATGATTTTAAAGT+AGG - chr4.4:80382815-80382834 MS.gene80762:intron 20.0%
!!! TCTATTTTAAGATATGAAAC+TGG - chr4.4:80378857-80378876 MS.gene80762:intron 20.0%
!!! TTCATGTAATTAATTTTGCA+GGG - chr4.4:80383688-80383707 MS.gene80762:intron 20.0%
!!! TTCATTTTCATTATTCTTGT+AGG - chr4.4:80381997-80382016 MS.gene80762:CDS 20.0%
!!! TTTCATGTAATTAATTTTGC+AGG - chr4.4:80383687-80383706 MS.gene80762:intron 20.0%
!!! TTTGAAATTTCTTGAAGAAT+GGG + chr4.4:80380881-80380900 None:intergenic 20.0%
! AAAATCGCAATCAAAATCAA+TGG + chr4.4:80379489-80379508 None:intergenic 25.0%
! AATGCATATATCAAGATCTA+TGG + chr4.4:80381311-80381330 None:intergenic 25.0%
! AATTATCTGTATGTGTATAG+TGG - chr4.4:80380780-80380799 MS.gene80762:intron 25.0%
! ACAATACTCATCAATTTCTT+AGG - chr4.4:80380495-80380514 MS.gene80762:intron 25.0%
! AGGTTAGTAGATGATATATT+GGG - chr4.4:80382710-80382729 MS.gene80762:intron 25.0%
! ATAATCAATTTATTAGAGCG+AGG + chr4.4:80381029-80381048 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+TGG + chr4.4:80380120-80380139 None:intergenic 25.0%
! CAAAACGTTTAGCATATTAA+AGG - chr4.4:80381077-80381096 MS.gene80762:intron 25.0%
! CAGTTAAGAAGAAGAAAAAA+CGG - chr4.4:80381142-80381161 MS.gene80762:intron 25.0%
! CCAGTTAAATTTCAATGTTA+TGG + chr4.4:80383414-80383433 None:intergenic 25.0%
! CCATAACATTGAAATTTAAC+TGG - chr4.4:80383411-80383430 MS.gene80762:intron 25.0%
! CTAAAAATGAGTTCATAAGT+GGG - chr4.4:80379668-80379687 MS.gene80762:intron 25.0%
! CTTTCAAATGAATTCTACAT+TGG - chr4.4:80380824-80380843 MS.gene80762:CDS 25.0%
! GAAAAAAAATGTGAATCCTA+TGG + chr4.4:80379760-80379779 None:intergenic 25.0%
! GAAGATAAGAAAAAACAGAA+GGG + chr4.4:80381765-80381784 None:intergenic 25.0%
! GAATCAATATTGAGTTATTG+AGG + chr4.4:80380318-80380337 None:intergenic 25.0%
! GTCATCAATTGAATGTTAAT+AGG - chr4.4:80380204-80380223 MS.gene80762:intron 25.0%
! TATAAACTAGAGGTTTGTAT+TGG + chr4.4:80382495-80382514 None:intergenic 25.0%
! TATCTTCACAAATATCTACA+TGG + chr4.4:80381527-80381546 None:intergenic 25.0%
! TATGGTTCAATATGTTCAAT+TGG + chr4.4:80383396-80383415 None:intergenic 25.0%
! TCATTATTCTTGTAGGATTA+TGG - chr4.4:80382004-80382023 MS.gene80762:CDS 25.0%
! TCTAAAAATGAGTTCATAAG+TGG - chr4.4:80379667-80379686 MS.gene80762:intron 25.0%
! TCTTAAACATAACTCATTTC+TGG + chr4.4:80381633-80381652 None:intergenic 25.0%
! TCTTAAATGAAGATCATAGT+CGG + chr4.4:80380620-80380639 None:intergenic 25.0%
! TGAAGATAAGAAAAAACAGA+AGG + chr4.4:80381766-80381785 None:intergenic 25.0%
! TGAGATTCATCTTAATGTAT+CGG + chr4.4:80382549-80382568 None:intergenic 25.0%
! TGATCTTCATTTAAGAAAAG+CGG - chr4.4:80380624-80380643 MS.gene80762:CDS 25.0%
! TTCAATATGTTCAATTGGAT+CGG + chr4.4:80383391-80383410 None:intergenic 25.0%
! TTGTTGAGTTAATCAATTTC+AGG + chr4.4:80380166-80380185 None:intergenic 25.0%
! TTTAGCATCCTCTTTATAAT+AGG + chr4.4:80381706-80381725 None:intergenic 25.0%
! TTTCATAGCTTATCTAGATT+AGG - chr4.4:80381936-80381955 MS.gene80762:intron 25.0%
!! AATACAAATCTGACATTTTC+AGG + chr4.4:80382765-80382784 None:intergenic 25.0%
!! ACATCAAATTTGAAACCTTA+TGG + chr4.4:80381975-80381994 None:intergenic 25.0%
!! CTCACTCTAAAAAATTATAG+AGG + chr4.4:80384214-80384233 None:intergenic 25.0%
!!! AATTGATGTGTTTTTTACAG+TGG - chr4.4:80383023-80383042 MS.gene80762:intron 25.0%
!!! ATTGATGTGTTTTTTACAGT+GGG - chr4.4:80383024-80383043 MS.gene80762:intron 25.0%
!!! CTTAATTTAAGTCATTTTGG+AGG - chr4.4:80380594-80380613 MS.gene80762:CDS 25.0%
!!! GAGTTTATTTCTTTTGAAAC+CGG - chr4.4:80382346-80382365 MS.gene80762:intron 25.0%
!!! TCGTTTTTGTTATAGCTTTT+TGG - chr4.4:80382969-80382988 MS.gene80762:intron 25.0%
AAAATCGCAATCAAAATCGA+AGG + chr4.4:80379554-80379573 None:intergenic 30.0%
AAATTTCTTGAAGAATGGGT+GGG + chr4.4:80380877-80380896 None:intergenic 30.0%
AAGTTCTATGATAGGAAGAT+GGG + chr4.4:80379844-80379863 None:intergenic 30.0%
AATCTCCATTGAAAAACTTG+TGG - chr4.4:80383974-80383993 MS.gene80762:intron 30.0%
AATTACCTATTTGAAAGGCA+AGG + chr4.4:80379122-80379141 None:intergenic 30.0%
ACCTATAAACTTATTACGTC+AGG - chr4.4:80382105-80382124 MS.gene80762:intron 30.0%
ACCTGACGTAATAAGTTTAT+AGG + chr4.4:80382109-80382128 None:intergenic 30.0%
AGACTCAACAATTACAATCA+TGG + chr4.4:80379650-80379669 None:intergenic 30.0%
AGATCTTCAATACTTTGATG+AGG - chr4.4:80381652-80381671 MS.gene80762:CDS 30.0%
AGGTATAGATAAAATTGGGA+GGG + chr4.4:80381686-80381705 None:intergenic 30.0%
ATATTCTTCACATCTTTGCT+AGG - chr4.4:80383919-80383938 MS.gene80762:intron 30.0%
ATCATTACCTAAACTTAGTG+TGG - chr4.4:80380090-80380109 MS.gene80762:intron 30.0%
ATCTCCATTGAAAAACTTGT+GGG - chr4.4:80383975-80383994 MS.gene80762:intron 30.0%
ATTACCTATTTGAAAGGCAA+GGG + chr4.4:80379121-80379140 None:intergenic 30.0%
ATTTGAATTTGAGTCGTTGA+AGG + chr4.4:80379273-80379292 None:intergenic 30.0%
CAAAAAATGTCAAGGATTAC+CGG - chr4.4:80380453-80380472 MS.gene80762:intron 30.0%
CAACAAATAGAGATTATGGT+TGG + chr4.4:80381241-80381260 None:intergenic 30.0%
CATGCAAATCTAAGCAAAAA+AGG - chr4.4:80382277-80382296 MS.gene80762:intron 30.0%
CTATATTTGATAGGTACGTA+GGG - chr4.4:80378974-80378993 MS.gene80762:intron 30.0%
CTATGAAAAAAATTACTCGG+TGG + chr4.4:80381924-80381943 None:intergenic 30.0%
CTCATATGCAAAAAATGTCA+AGG - chr4.4:80380445-80380464 MS.gene80762:intron 30.0%
CTGTGTACTCTATATTTGAT+AGG - chr4.4:80378965-80378984 MS.gene80762:intron 30.0%
GAAGCAACAAATAGAGATTA+TGG + chr4.4:80381245-80381264 None:intergenic 30.0%
GAGATTCATCTTAATGTATC+GGG + chr4.4:80382548-80382567 None:intergenic 30.0%
GAGGTTAGTAGATGATATAT+TGG - chr4.4:80382709-80382728 MS.gene80762:intron 30.0%
TAAAGTTGACAAAAAAGGAG+TGG + chr4.4:80382633-80382652 None:intergenic 30.0%
TAACAGCAAGTTGTCAAAAT+CGG + chr4.4:80379621-80379640 None:intergenic 30.0%
TACTCATCAATTTCTTAGGA+AGG - chr4.4:80380499-80380518 MS.gene80762:intron 30.0%
TAGATTTGCATGAAACTCAA+CGG + chr4.4:80382269-80382288 None:intergenic 30.0%
TAGCAAAGATGTGAAGAATA+TGG + chr4.4:80383920-80383939 None:intergenic 30.0%
TAGGTATAGATAAAATTGGG+AGG + chr4.4:80381687-80381706 None:intergenic 30.0%
TATAAACTTATTACGTCAGG+TGG - chr4.4:80382108-80382127 MS.gene80762:intron 30.0%
TATCTATATGCTAACAACAC+CGG + chr4.4:80382368-80382387 None:intergenic 30.0%
TATGTTCCTAATGCTAACTA+GGG - chr4.4:80380522-80380541 MS.gene80762:intron 30.0%
TCACTGCAGAAAAATTGTAA+AGG - chr4.4:80381587-80381606 MS.gene80762:intron 30.0%
TCATATACTTATGCCATCTT+AGG + chr4.4:80383804-80383823 None:intergenic 30.0%
TCCAAAATAGATTCACACTA+GGG + chr4.4:80379994-80380013 None:intergenic 30.0%
TCTATATTTGATAGGTACGT+AGG - chr4.4:80378973-80378992 MS.gene80762:intron 30.0%
TCTCGCGTTTAAAGAAAATT+CGG + chr4.4:80384028-80384047 None:intergenic 30.0%
TGCTTTGCTTATTGTCAAAA+GGG + chr4.4:80381059-80381078 None:intergenic 30.0%
TTAAAGAAAATTCGGTTGGA+AGG + chr4.4:80384020-80384039 None:intergenic 30.0%
TTCAGGAGAATTAATTCTAC+TGG + chr4.4:80380149-80380168 None:intergenic 30.0%
TTGCTTTGCTTATTGTCAAA+AGG + chr4.4:80381060-80381079 None:intergenic 30.0%
! ATTCCTTTTCAGTCATAGTT+AGG + chr4.4:80380728-80380747 None:intergenic 30.0%
! ATTTTTGTAGATTTGCCACT+TGG - chr4.4:80380413-80380432 MS.gene80762:intron 30.0%
! TAAAATCGTGCGATTTTGTA+TGG + chr4.4:80379334-80379353 None:intergenic 30.0%
! TAATTAATTTTGCAGGGTTC+AGG - chr4.4:80383694-80383713 MS.gene80762:intron 30.0%
! TACCTTTTGAACTTGAAACT+GGG - chr4.4:80378787-80378806 MS.gene80762:intron 30.0%
! TTTAAGATATGAAACTGGTC+CGG - chr4.4:80378862-80378881 MS.gene80762:intron 30.0%
! TTTTCTTCTTCTTAACTGTC+CGG + chr4.4:80381140-80381159 None:intergenic 30.0%
!! GGGTTAGTCATATTAAGTAA+TGG - chr4.4:80380936-80380955 MS.gene80762:intron 30.0%
!!! TTGATGTGTTTTTTACAGTG+GGG - chr4.4:80383025-80383044 MS.gene80762:intron 30.0%
AAAAAGACCCTCTTATGCTT+TGG - chr4.4:80379061-80379080 MS.gene80762:intron 35.0%
AAAATGTGAATCCTATGGGT+AGG + chr4.4:80379755-80379774 None:intergenic 35.0%
AAATCGATGAACGAACGATA+CGG + chr4.4:80383303-80383322 None:intergenic 35.0%
AACAGCAAGTTGTCAAAATC+GGG + chr4.4:80379620-80379639 None:intergenic 35.0%
AATGACATATGCAACTGTGA+AGG - chr4.4:80383549-80383568 MS.gene80762:intron 35.0%
AGATAATTGTCTCAGTCGAT+TGG + chr4.4:80380768-80380787 None:intergenic 35.0%
AGATTATCCATTGCTAAACG+CGG + chr4.4:80383959-80383978 None:intergenic 35.0%
ATCTTCTTTGTATGTTGTCC+AGG + chr4.4:80381384-80381403 None:intergenic 35.0%
ATGCATTATGAAGCCTAAAC+AGG - chr4.4:80381324-80381343 MS.gene80762:intron 35.0%
CAATGGGACTATGATAAAAC+TGG + chr4.4:80383238-80383257 None:intergenic 35.0%
CAGATATCCAAAGCATAAGA+GGG + chr4.4:80379071-80379090 None:intergenic 35.0%
CTTAGGCTTCTGATTTACAA+TGG + chr4.4:80383787-80383806 None:intergenic 35.0%
GAAAATGTCAAGACCTGTTT+AGG + chr4.4:80381340-80381359 None:intergenic 35.0%
GAAACCTGGAGATTTATCAA+TGG + chr4.4:80381219-80381238 None:intergenic 35.0%
GAAAGAAACTCTATCAAGCA+CGG + chr4.4:80380563-80380582 None:intergenic 35.0%
GAAATTTCTTGAAGAATGGG+TGG + chr4.4:80380878-80380897 None:intergenic 35.0%
GAAGTTCTATGATAGGAAGA+TGG + chr4.4:80379845-80379864 None:intergenic 35.0%
GATGTGAAGAATATGGAATC+AGG + chr4.4:80383913-80383932 None:intergenic 35.0%
GCGTTTAAAGAAAATTCGGT+TGG + chr4.4:80384024-80384043 None:intergenic 35.0%
GTATGTTCCTAATGCTAACT+AGG - chr4.4:80380521-80380540 MS.gene80762:intron 35.0%
GTCCAAAATAGATTCACACT+AGG + chr4.4:80379995-80380014 None:intergenic 35.0%
TAGATTCACACTAGGGTTTA+CGG + chr4.4:80379987-80380006 None:intergenic 35.0%
TAGTGAAGTGAAGTATGAGA+AGG + chr4.4:80378660-80378679 None:intergenic 35.0%
TATCAAATCCCATATGCTCA+TGG - chr4.4:80381407-80381426 MS.gene80762:intron 35.0%
TCACAGTTGCATATGTCATT+CGG + chr4.4:80383549-80383568 None:intergenic 35.0%
TCCATTTGCATTCGAAATCA+AGG - chr4.4:80380227-80380246 MS.gene80762:intron 35.0%
TCCTTGATTTCGAATGCAAA+TGG + chr4.4:80380231-80380250 None:intergenic 35.0%
TCTAAACTACTCCATTGTAG+AGG - chr4.4:80383097-80383116 MS.gene80762:intron 35.0%
TCTCCTAACTATGACTGAAA+AGG - chr4.4:80380722-80380741 MS.gene80762:intron 35.0%
TCTTCTTTGTATGTTGTCCA+GGG + chr4.4:80381383-80381402 None:intergenic 35.0%
TGAATAAAGTCGCATAATCC+TGG + chr4.4:80379250-80379269 None:intergenic 35.0%
TGTAAATCAGAAGCCTAAGA+TGG - chr4.4:80383788-80383807 MS.gene80762:CDS 35.0%
TGTCAGATACTACTTGTTCT+TGG - chr4.4:80378684-80378703 MS.gene80762:intron 35.0%
TTATCATAGTCCCATTGAAC+TGG - chr4.4:80383241-80383260 MS.gene80762:intron 35.0%
TTCACCTGTATATCAAAGAG+CGG + chr4.4:80382306-80382325 None:intergenic 35.0%
TTTCCATTTCTTCGATTGAC+AGG - chr4.4:80381174-80381193 MS.gene80762:intron 35.0%
TTTCCTGTCAATCGAAGAAA+TGG + chr4.4:80381180-80381199 None:intergenic 35.0%
! AAACAGGTCTTGACATTTTC+AGG - chr4.4:80381340-80381359 MS.gene80762:intron 35.0%
! AACAGGTCTTGACATTTTCA+GGG - chr4.4:80381341-80381360 MS.gene80762:intron 35.0%
! ACCCTAGTGTGAATCTATTT+TGG - chr4.4:80379990-80380009 MS.gene80762:intron 35.0%
! CGATTTTGTGCGATTTTACT+AGG + chr4.4:80379305-80379324 None:intergenic 35.0%
! CTACCTTTTGAACTTGAAAC+TGG - chr4.4:80378786-80378805 MS.gene80762:intron 35.0%
! GGAAAGGTTTTACAAGTGTT+TGG + chr4.4:80379966-80379985 None:intergenic 35.0%
! GGACACAATTTTTGTCCATA+AGG - chr4.4:80381957-80381976 MS.gene80762:intron 35.0%
! TATGTTTTCCCATGTTCTCT+AGG - chr4.4:80383746-80383765 MS.gene80762:CDS 35.0%
! TCGGGATTTTGTCAACAATA+TGG + chr4.4:80379212-80379231 None:intergenic 35.0%
! TTCGAAATCAAGGAGTACAA+CGG - chr4.4:80380237-80380256 MS.gene80762:intron 35.0%
!! AATTTAACTGGTTCGATCTC+CGG - chr4.4:80383423-80383442 MS.gene80762:intron 35.0%
!! ACATAGCTTTGATCCATGTA+GGG - chr4.4:80382184-80382203 MS.gene80762:intron 35.0%
!! ATTTTCAGGGATATCTGCTA+GGG - chr4.4:80381354-80381373 MS.gene80762:intron 35.0%
!! GTTTCAAGTTCAAAAGGTAG+TGG + chr4.4:80378786-80378805 None:intergenic 35.0%
!! TACATAGCTTTGATCCATGT+AGG - chr4.4:80382183-80382202 MS.gene80762:intron 35.0%
!!! CTGGATTTTAGGATGTAAGT+CGG + chr4.4:80379231-80379250 None:intergenic 35.0%
!!! TGGATTTTAGGATGTAAGTC+GGG + chr4.4:80379230-80379249 None:intergenic 35.0%
AAAAACTTGTGGGACACACA+AGG - chr4.4:80383985-80384004 MS.gene80762:intron 40.0%
AAAACTGGAATCAAGCCAAC+CGG + chr4.4:80383223-80383242 None:intergenic 40.0%
AACATGGGAAAACATAGCTC+AGG + chr4.4:80383742-80383761 None:intergenic 40.0%
AATCCCATATGCTCATGGAA+TGG - chr4.4:80381412-80381431 MS.gene80762:intron 40.0%
ACAAGAATGTCAGCTTCTAG+GGG + chr4.4:80379867-80379886 None:intergenic 40.0%
ACAGCAAGTTGTCAAAATCG+GGG + chr4.4:80379619-80379638 None:intergenic 40.0%
ACGAATCTCGCATTGAATTC+TGG - chr4.4:80380015-80380034 MS.gene80762:intron 40.0%
ACTACTCCATTGTAGAGGAT+TGG - chr4.4:80383102-80383121 MS.gene80762:intron 40.0%
ACTTTGCCATCTGTGTACTT+AGG - chr4.4:80379788-80379807 MS.gene80762:CDS 40.0%
AGAGATTATGGTTGGAAACC+TGG + chr4.4:80381233-80381252 None:intergenic 40.0%
AGATATCCACCTAGAGAACA+TGG + chr4.4:80383758-80383777 None:intergenic 40.0%
AGCATATTAAAGGGACTGTC+CGG - chr4.4:80381087-80381106 MS.gene80762:intron 40.0%
AGTCTACTCAAGCATGGATA+AGG - chr4.4:80383072-80383091 MS.gene80762:intron 40.0%
ATCCCATATGCTCATGGAAT+GGG - chr4.4:80381413-80381432 MS.gene80762:intron 40.0%
CACAAGAATGTCAGCTTCTA+GGG + chr4.4:80379868-80379887 None:intergenic 40.0%
CCAGATATCCAAAGCATAAG+AGG + chr4.4:80379072-80379091 None:intergenic 40.0%
CGACTTACATCCTAAAATCC+AGG - chr4.4:80379229-80379248 MS.gene80762:intron 40.0%
CTTCCTAACCAAGTTTCTGA+AGG - chr4.4:80383465-80383484 MS.gene80762:intron 40.0%
CTTCTTTGTATGTTGTCCAG+GGG + chr4.4:80381382-80381401 None:intergenic 40.0%
GATACCGCTCTTTGATATAC+AGG - chr4.4:80382299-80382318 MS.gene80762:intron 40.0%
GATATCCACCTAGAGAACAT+GGG + chr4.4:80383757-80383776 None:intergenic 40.0%
GCAGAAAAAGAAGAACAACC+AGG + chr4.4:80379099-80379118 None:intergenic 40.0%
GTCTACTCAAGCATGGATAA+GGG - chr4.4:80383073-80383092 MS.gene80762:intron 40.0%
TATCAATTAGTATCAGCGCC+TGG + chr4.4:80379938-80379957 None:intergenic 40.0%
TATGAGAAACCAGTTCCAAG+TGG + chr4.4:80380431-80380450 None:intergenic 40.0%
TCACAAGAATGTCAGCTTCT+AGG + chr4.4:80379869-80379888 None:intergenic 40.0%
TCCTTGTGTATCTGCGTTAA+AGG + chr4.4:80383516-80383535 None:intergenic 40.0%
TCCTTTAACGCAGATACACA+AGG - chr4.4:80383512-80383531 MS.gene80762:intron 40.0%
TCTAGGGGAAGTTCTATGAT+AGG + chr4.4:80379852-80379871 None:intergenic 40.0%
TCTATGATAGGAAGATGGGT+AGG + chr4.4:80379840-80379859 None:intergenic 40.0%
TCTTAACTGTCCGGTTCTTA+GGG + chr4.4:80381131-80381150 None:intergenic 40.0%
TCTTATCTTCAGTGTCTCTC+AGG - chr4.4:80381775-80381794 MS.gene80762:intron 40.0%
TGAAGTGAAGTATGAGAAGG+AGG + chr4.4:80378657-80378676 None:intergenic 40.0%
TGGTTGACCACACTAAGTTT+AGG + chr4.4:80380100-80380119 None:intergenic 40.0%
TGTCTCAGTCGATTGGAAAA+TGG + chr4.4:80380761-80380780 None:intergenic 40.0%
TTATCCATGCTTGAGTAGAC+TGG + chr4.4:80383073-80383092 None:intergenic 40.0%
TTCTTAACTGTCCGGTTCTT+AGG + chr4.4:80381132-80381151 None:intergenic 40.0%
TTGATAGGTACGTAGGGTTA+GGG - chr4.4:80378980-80378999 MS.gene80762:intron 40.0%
TTGTAGCCTAAGTACACAGA+TGG + chr4.4:80379797-80379816 None:intergenic 40.0%
TTTGATAGGTACGTAGGGTT+AGG - chr4.4:80378979-80378998 MS.gene80762:intron 40.0%
! AACTAGAGGTTTGTATTGGC+TGG + chr4.4:80382491-80382510 None:intergenic 40.0%
! AGCATAAGAGGGTCTTTTTG+AGG + chr4.4:80379060-80379079 None:intergenic 40.0%
! ATGGTTTGTAAATGGCCAAG+TGG - chr4.4:80383130-80383149 MS.gene80762:intron 40.0%
! ATTGGAGCTGATTCATACTC+TGG - chr4.4:80380842-80380861 MS.gene80762:CDS 40.0%
! CCTCTTATGCTTTGGATATC+TGG - chr4.4:80379069-80379088 MS.gene80762:intron 40.0%
! CTTATGCTTTGGATATCTGG+TGG - chr4.4:80379072-80379091 MS.gene80762:intron 40.0%
! GTAAAGATGATTTGCGTCTG+AGG - chr4.4:80381830-80381849 MS.gene80762:intron 40.0%
! GTCGCATAATCCTGGATTTT+AGG + chr4.4:80379242-80379261 None:intergenic 40.0%
! GTTTTTACCTCGCCACTAAA+TGG - chr4.4:80382026-80382045 MS.gene80762:CDS 40.0%
! TCGAAATCAAGGAGTACAAC+GGG - chr4.4:80380238-80380257 MS.gene80762:intron 40.0%
! TGGAGGTCATGGTTTGTAAA+TGG - chr4.4:80383122-80383141 MS.gene80762:intron 40.0%
! TGGTTAGCTACACAAAGATC+AGG + chr4.4:80382613-80382632 None:intergenic 40.0%
!! AACACCTTCCTGGTTTTCAA+GGG - chr4.4:80378760-80378779 MS.gene80762:intron 40.0%
!! CACCCAGTTTCAAGTTCAAA+AGG + chr4.4:80378792-80378811 None:intergenic 40.0%
!! CATTTTCAGGGATATCTGCT+AGG - chr4.4:80381353-80381372 MS.gene80762:intron 40.0%
!! GTGTCCCACAAGTTTTTCAA+TGG + chr4.4:80383982-80384001 None:intergenic 40.0%
AACACCTTTGTCCATGACTG+TGG + chr4.4:80380288-80380307 None:intergenic 45.0%
AATGCTAACTAGGGTGCAGA+CGG - chr4.4:80380531-80380550 MS.gene80762:intron 45.0%
ACATCGTTCCCATGTTCCTA+TGG + chr4.4:80382212-80382231 None:intergenic 45.0%
ACTCCATTGTAGAGGATTGG+AGG - chr4.4:80383105-80383124 MS.gene80762:intron 45.0%
AGTCCCATTCCATGAGCATA+TGG + chr4.4:80381419-80381438 None:intergenic 45.0%
ATGATAGGAAGATGGGTAGG+AGG + chr4.4:80379837-80379856 None:intergenic 45.0%
ATGGGTAGGAGACTTGAAAC+TGG + chr4.4:80379741-80379760 None:intergenic 45.0%
CATCTCTGATGAACTCTACG+CGG - chr4.4:80381439-80381458 MS.gene80762:CDS 45.0%
CATGCTTGAGTAGACTGGAA+AGG + chr4.4:80383068-80383087 None:intergenic 45.0%
CCAGCCATTGATAAATCTCC+AGG - chr4.4:80381212-80381231 MS.gene80762:CDS 45.0%
CCTGGAGATTTATCAATGGC+TGG + chr4.4:80381215-80381234 None:intergenic 45.0%
CTCATCGCCAATCCATTTAG+TGG + chr4.4:80382041-80382060 None:intergenic 45.0%
CTTAACTGTCCGGTTCTTAG+GGG + chr4.4:80381130-80381149 None:intergenic 45.0%
CTTTCCAGTCTACTCAAGCA+TGG - chr4.4:80383066-80383085 MS.gene80762:intron 45.0%
GAGTTCATAAGTGGGACTGT+GGG - chr4.4:80379676-80379695 MS.gene80762:intron 45.0%
GCACCTTCAGAAACTTGGTT+AGG + chr4.4:80383471-80383490 None:intergenic 45.0%
GCATATTAAAGGGACTGTCC+GGG - chr4.4:80381088-80381107 MS.gene80762:intron 45.0%
GTCCCATTCCATGAGCATAT+GGG + chr4.4:80381418-80381437 None:intergenic 45.0%
GTGGTTCAGTCCAGTTCAAT+GGG + chr4.4:80383254-80383273 None:intergenic 45.0%
TACCTCGCCACTAAATGGAT+TGG - chr4.4:80382031-80382050 MS.gene80762:CDS 45.0%
TCAAAGGTTGAACACCTTCC+TGG - chr4.4:80378750-80378769 MS.gene80762:intron 45.0%
TCACACTAGGGTTTACGGAA+AGG + chr4.4:80379982-80380001 None:intergenic 45.0%
TCTGCACCCTAGTTAGCATT+AGG + chr4.4:80380531-80380550 None:intergenic 45.0%
TCTGCCCTTGCCTTTCAAAT+AGG - chr4.4:80379114-80379133 MS.gene80762:intron 45.0%
TCTTGAAGCTTCTCGCTCAA+AGG - chr4.4:80378734-80378753 MS.gene80762:intron 45.0%
TGACCTCCAATCCTCTACAA+TGG + chr4.4:80383111-80383130 None:intergenic 45.0%
TGAGTTCATAAGTGGGACTG+TGG - chr4.4:80379675-80379694 MS.gene80762:intron 45.0%
TGATAGGTACGTAGGGTTAG+GGG - chr4.4:80378981-80379000 MS.gene80762:intron 45.0%
TGTGGTTCAGTCCAGTTCAA+TGG + chr4.4:80383255-80383274 None:intergenic 45.0%
TGTTCCTATGGTACCCTACA+TGG + chr4.4:80382200-80382219 None:intergenic 45.0%
TTGTAAATGGCCAAGTGGCA+GGG - chr4.4:80383135-80383154 MS.gene80762:intron 45.0%
TTGTAGAGGATTGGAGGTCA+TGG - chr4.4:80383111-80383130 MS.gene80762:intron 45.0%
TTTGAGCGAGAAGCTTCAAG+AGG + chr4.4:80378735-80378754 None:intergenic 45.0%
TTTGTAAATGGCCAAGTGGC+AGG - chr4.4:80383134-80383153 MS.gene80762:intron 45.0%
! AAGATGATTTGCGTCTGAGG+AGG - chr4.4:80381833-80381852 MS.gene80762:intron 45.0%
! CAAAATCGGGGTTTTGCTTC+AGG + chr4.4:80379607-80379626 None:intergenic 45.0%
! GATTCAACCTGGTTCGATTG+TGG + chr4.4:80383273-80383292 None:intergenic 45.0%
! GGTTTTGCTTCAGGTCGAAA+GGG + chr4.4:80379598-80379617 None:intergenic 45.0%
! GTAGATTTGCCACTTGGAAC+TGG - chr4.4:80380419-80380438 MS.gene80762:intron 45.0%
! GTAGGGTACCATAGGAACAT+GGG - chr4.4:80382201-80382220 MS.gene80762:intron 45.0%
! GTTTCAAGTCTCCTACCCAT+AGG - chr4.4:80379741-80379760 MS.gene80762:CDS 45.0%
! GTTTTCACCGCGTTTAGCAA+TGG - chr4.4:80383949-80383968 MS.gene80762:intron 45.0%
! GTTTTCCCATGTTCTCTAGG+TGG - chr4.4:80383749-80383768 MS.gene80762:CDS 45.0%
! TACTCGGTGGCAGCTTAATT+CGG + chr4.4:80381911-80381930 None:intergenic 45.0%
! TGATCCATGTAGGGTACCAT+AGG - chr4.4:80382193-80382212 MS.gene80762:intron 45.0%
! TGTAGGGTACCATAGGAACA+TGG - chr4.4:80382200-80382219 MS.gene80762:intron 45.0%
!! ACGGTTACACTGATTCAACC+TGG + chr4.4:80383284-80383303 None:intergenic 45.0%
!! GAACACCTTCCTGGTTTTCA+AGG - chr4.4:80378759-80378778 MS.gene80762:intron 45.0%
AACTTGTGGGACACACAAGG+TGG - chr4.4:80383988-80384007 MS.gene80762:intron 50.0%
AAGGCCACAGTCATGGACAA+AGG - chr4.4:80380281-80380300 MS.gene80762:intron 50.0%
AAGTCAGCATATTCGCCGGT+TGG - chr4.4:80383205-80383224 MS.gene80762:intron 50.0%
ATCCCTCATTTACACCCAGG+CGG - chr4.4:80379703-80379722 MS.gene80762:intron 50.0%
ATGCTAACTAGGGTGCAGAC+GGG - chr4.4:80380532-80380551 MS.gene80762:intron 50.0%
CCGAAAGTCAGCATATTCGC+CGG - chr4.4:80383201-80383220 MS.gene80762:intron 50.0%
CCTACGCACCTTCAGAAACT+TGG + chr4.4:80383476-80383495 None:intergenic 50.0%
CGAATTTGACTGCTCGAACG+TGG + chr4.4:80382952-80382971 None:intergenic 50.0%
CTTTGGATATCTGGTGGTCC+TGG - chr4.4:80379078-80379097 MS.gene80762:intron 50.0%
GACTGAACCACAATCGAACC+AGG - chr4.4:80383263-80383282 MS.gene80762:intron 50.0%
GAGGAGGAGATCTTTGACTC+AGG - chr4.4:80381849-80381868 MS.gene80762:intron 50.0%
GCTTGCCAAGTTTGGTCTCA+AGG - chr4.4:80380262-80380281 MS.gene80762:intron 50.0%
TATCAGCGCCTGGTTGCTAT+TGG + chr4.4:80379928-80379947 None:intergenic 50.0%
TCTTGAAGAATGGGTGGGAC+AGG + chr4.4:80380872-80380891 None:intergenic 50.0%
TTCATAAGTGGGACTGTGGG+AGG - chr4.4:80379679-80379698 MS.gene80762:intron 50.0%
TTGATGCTTACCCTGCCACT+TGG + chr4.4:80383148-80383167 None:intergenic 50.0%
TTTCCGAGCCAATAGCAACC+AGG - chr4.4:80379917-80379936 MS.gene80762:intron 50.0%
! ACTCGGTGGCAGCTTAATTC+GGG + chr4.4:80381910-80381929 None:intergenic 50.0%
! CATAGCTCAGGAGTGTACTC+AGG + chr4.4:80383730-80383749 None:intergenic 50.0%
! CCAAGTTTCTGAAGGTGCGT+AGG - chr4.4:80383473-80383492 MS.gene80762:intron 50.0%
! GAACTAGTTTCCAGTCGCTC+CGG + chr4.4:80380475-80380494 None:intergenic 50.0%
! GGGTTTTGCTTCAGGTCGAA+AGG + chr4.4:80379599-80379618 None:intergenic 50.0%
! TGTGGCCTTGAGACCAAACT+TGG + chr4.4:80380270-80380289 None:intergenic 50.0%
!! CAAGGCACTGCATATTCGAG+AGG - chr4.4:80382069-80382088 MS.gene80762:intron 50.0%
!! CCGGCGAATATGCTGACTTT+CGG + chr4.4:80383204-80383223 None:intergenic 50.0%
!! GGTTGCTATTGGCTCGGAAA+AGG + chr4.4:80379917-80379936 None:intergenic 50.0%
ACTGTCCGGTTCTTAGGGGA+TGG + chr4.4:80381126-80381145 None:intergenic 55.0%
CAACGGGAGCTTGCCAAGTT+TGG - chr4.4:80380254-80380273 MS.gene80762:intron 55.0%
CGCCAATCCATTTAGTGGCG+AGG + chr4.4:80382036-80382055 None:intergenic 55.0%
CTCGGTGGCAGCTTAATTCG+GGG + chr4.4:80381909-80381928 None:intergenic 55.0%
CTGTCCGGTTCTTAGGGGAT+GGG + chr4.4:80381125-80381144 None:intergenic 55.0%
GATATCTGCTAGGGAACCCC+TGG - chr4.4:80381363-80381382 MS.gene80762:intron 55.0%
GGCATCCCTCATTTACACCC+AGG - chr4.4:80379700-80379719 MS.gene80762:intron 55.0%
GGTTCCCATCCCCTAAGAAC+CGG - chr4.4:80381118-80381137 MS.gene80762:intron 55.0%
GTGGCCCTTGAAAACCAGGA+AGG + chr4.4:80378767-80378786 None:intergenic 55.0%
TCAAGGATTACCGGAGCGAC+TGG - chr4.4:80380462-80380481 MS.gene80762:intron 55.0%
TCCCTCATTTACACCCAGGC+GGG - chr4.4:80379704-80379723 MS.gene80762:intron 55.0%
TGGTCTCAAGGCCACAGTCA+TGG - chr4.4:80380274-80380293 MS.gene80762:intron 55.0%
TTCTTAGGGGATGGGAACCC+TGG + chr4.4:80381117-80381136 None:intergenic 55.0%
! GGTAGTGGCCCTTGAAAACC+AGG + chr4.4:80378771-80378790 None:intergenic 55.0%
!! TGGCGATGAGAGTGTTCGCA+AGG - chr4.4:80382051-80382070 MS.gene80762:CDS 55.0%
AAGGGACTGTCCGGGTTACC+AGG - chr4.4:80381096-80381115 MS.gene80762:intron 60.0%
AGGGACTGTCCGGGTTACCA+GGG - chr4.4:80381097-80381116 MS.gene80762:intron 60.0%
CCCCGCCTGGGTGTAAATGA+GGG + chr4.4:80379708-80379727 None:intergenic 60.0%
CCCTCATTTACACCCAGGCG+GGG - chr4.4:80379705-80379724 MS.gene80762:intron 60.0%
CCTCATTTACACCCAGGCGG+GGG - chr4.4:80379706-80379725 MS.gene80762:intron 60.0%
GGATGGGAACCCTGGTAACC+CGG + chr4.4:80381109-80381128 None:intergenic 60.0%
! GCGCCTGGTTGCTATTGGCT+CGG + chr4.4:80379923-80379942 None:intergenic 60.0%
CCCCCGCCTGGGTGTAAATG+AGG + chr4.4:80379709-80379728 None:intergenic 65.0%
GGCGCAAACTTCCCCCGCCT+GGG + chr4.4:80379720-80379739 None:intergenic 70.0%
TGGCGCAAACTTCCCCCGCC+TGG + chr4.4:80379721-80379740 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 80378639 80384242 80378639 ID=MS.gene80762
chr4.4 mRNA 80378639 80384242 80378639 ID=MS.gene80762.t1;Parent=MS.gene80762
chr4.4 exon 80384073 80384242 80384073 ID=MS.gene80762.t1.exon1;Parent=MS.gene80762.t1
chr4.4 CDS 80384073 80384242 80384073 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80383746 80383894 80383746 ID=MS.gene80762.t1.exon2;Parent=MS.gene80762.t1
chr4.4 CDS 80383746 80383894 80383746 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80382579 80382655 80382579 ID=MS.gene80762.t1.exon3;Parent=MS.gene80762.t1
chr4.4 CDS 80382579 80382655 80382579 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80382361 80382480 80382361 ID=MS.gene80762.t1.exon4;Parent=MS.gene80762.t1
chr4.4 CDS 80382361 80382480 80382361 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80381979 80382081 80381979 ID=MS.gene80762.t1.exon5;Parent=MS.gene80762.t1
chr4.4 CDS 80381979 80382081 80381979 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80381648 80381685 80381648 ID=MS.gene80762.t1.exon6;Parent=MS.gene80762.t1
chr4.4 CDS 80381648 80381685 80381648 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80381421 80381519 80381421 ID=MS.gene80762.t1.exon7;Parent=MS.gene80762.t1
chr4.4 CDS 80381421 80381519 80381421 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80381208 80381294 80381208 ID=MS.gene80762.t1.exon8;Parent=MS.gene80762.t1
chr4.4 CDS 80381208 80381294 80381208 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80380954 80381094 80380954 ID=MS.gene80762.t1.exon9;Parent=MS.gene80762.t1
chr4.4 CDS 80380954 80381094 80380954 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80380791 80380862 80380791 ID=MS.gene80762.t1.exon10;Parent=MS.gene80762.t1
chr4.4 CDS 80380791 80380862 80380791 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80380561 80380676 80380561 ID=MS.gene80762.t1.exon11;Parent=MS.gene80762.t1
chr4.4 CDS 80380561 80380676 80380561 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80379725 80379838 80379725 ID=MS.gene80762.t1.exon12;Parent=MS.gene80762.t1
chr4.4 CDS 80379725 80379838 80379725 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80379311 80379356 80379311 ID=MS.gene80762.t1.exon13;Parent=MS.gene80762.t1
chr4.4 CDS 80379311 80379356 80379311 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
chr4.4 exon 80378639 80378653 80378639 ID=MS.gene80762.t1.exon14;Parent=MS.gene80762.t1
chr4.4 CDS 80378639 80378653 80378639 ID=cds.MS.gene80762.t1;Parent=MS.gene80762.t1
Gene Sequence

>MS.gene80762

ATGAACATGATGGCTCCTCCTTCTCATACTTCACTTCACTATTCTTGTCAGATACTACTTGTTCTTGGACTTTTTTGTTTGCATATGTCAACTCCTCTTGAAGCTTCTCGCTCAAAGGTTGAACACCTTCCTGGTTTTCAAGGGCCACTACCTTTTGAACTTGAAACTGGGTGAGAGCAATCCTAATCATTCCTTTTTCTTTATCAATGTTTCTTTTTTCTATTTTAAGATATGAAACTGGTCCGGTATATACTTTTTTATTTGTTAGTGCTTCATTTTTCATTGAGTTAAATCAATAGTTATAGTATGATATGCAATATAAATGGCTGTGTACTCTATATTTGATAGGTACGTAGGGTTAGGGGAAACAGATGATGACATGCAAGTGTTTTACTATTTTGTAAAGTCAGAAAATAATCCTCAAAAAGACCCTCTTATGCTTTGGATATCTGGTGGTCCTGGTTGTTCTTCTTTTTCTGCCCTTGCCTTTCAAATAGGTAATTTTAAAGTGATTATTCAATATTTTTTGTGAATTTTGTTTGACAGTACTATTTTTGTGAGTACTGTTAACCATATTGTTGACAAAATCCCGACTTACATCCTAAAATCCAGGATTATGCGACTTTATTCACCTTCAACGACTCAAATTCAAATATGCAAAATCCTAGTAAAATCGCACAAAATCGTGAAATCCATACAAAATCGCACGATTTTAAAGAGTTTTGAAAGATTTTGTCCATTTTTTTAGTCATTTATGTATAAGTATCTTGTGGACTTTAAACTGAGTCATTTATCACTATATACAATTTATAACATATATTAAACATTATTTTTGTTTTGGTAAAATCCATTGATTTTGATTGCGATTTTACTATTTCTTGTATCGATTCGACAAAAGTAATTGAGTAAAATCCTTCGATTTTGATTGCGATTTTATGATTTTCGATTTTGCTCTTCCCTTTCGACCTGAAGCAAAACCCCGATTTTGACAACTTGCTGTTAACAATTCCATGATTGTAATTGTTGAGTCTAAAAATGAGTTCATAAGTGGGACTGTGGGAGGCATCCCTCATTTACACCCAGGCGGGGGAAGTTTGCGCCAGTTTCAAGTCTCCTACCCATAGGATTCACATTTTTTTTCTGCTGATAACTTTGCCATCTGTGTACTTAGGCTACAAGCTGCGCTAGTTTTAAGCCTCCTACCCATCTTCCTATCATAGAACTTCCCCTAGAAGCTGACATTCTTGTGACTGTATTCTAGAACTCTTTACATAGCCTTTTCCGAGCCAATAGCAACCAGGCGCTGATACTAATTGATAAGTATCCAAACACTTGTAAAACCTTTCCGTAAACCCTAGTGTGAATCTATTTTGGACACGAATCTCGCATTGAATTCTGGTTTATTATGTTGAATCTCAAAAGACTACGATGATCCCAATTCATTCAAATGTATCATTACCTAAACTTAGTGTGGTCAACCACTTTTCTTTTGTCATTTGATTCATGACCAGTAGAATTAATTCTCCTGAAATTGATTAACTCAACAACATTCATAGAGTAATTTTGTCATCAATTGAATGTTAATAGGTCCATTTGCATTCGAAATCAAGGAGTACAACGGGAGCTTGCCAAGTTTGGTCTCAAGGCCACAGTCATGGACAAAGGTGTTGATAACACCTCAATAACTCAATATTGATTCATTCATCGAAGTTAATCCAAAGTTTTTAATAAGAACTAATGTTTATAATTATCTATTGGTCAGATATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCAAGGATTACCGGAGCGACTGGAAACTAGTTCACAATACTCATCAATTTCTTAGGAAGGTATGTTCCTAATGCTAACTAGGGTGCAGACGGGCACTGCCGTGCTTGATAGAGTTTCTTTCACAACTTCAAACTTAATTTAAGTCATTTTGGAGGCCGACTATGATCTTCATTTAAGAAAAGCGGATCATGTTACTGTTGTCATATTTCTTGTCGCGCTTTTCTATTTCACTTTGTTCAATATTTACTTTAGGAGAATCGTCTCCTAACTATGACTGAAAAGGAATGATAATTTGACCATTTTCCAATCGACTGAGACAATTATCTGTATGTGTATAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCTGGCATTCCTGTCCCACCCATTCTTCAAGAAATTTCAAATGGTTAGAAATCGTAAAAAGCACAATTTTTAAGATGGGTTAGTCATATTAAGTAATGGTAAATTTCTTTATAATTATATAATGATCAGGAGGCCATAAATTTTCTTAATCATTTTGATTTGTCATCCTCGCTCTAATAAATTGATTATTCGCATTCCCTTTTGACAATAAGCAAAGCAAAACGTTTAGCATATTAAAGGGACTGTCCGGGTTACCAGGGTTCCCATCCCCTAAGAACCGGACAGTTAAGAAGAAGAAAAAACGGACTGATATTTTTCCATTTCTTCGATTGACAGGAAATGAAAAAAGTCTCCAGCCATTGATAAATCTCCAGGTTTCCAACCATAATCTCTATTTGTTGCTTCTACTACCGACGAAAAATTAATCTAAATAGGAATTTCTGAAATACCATAGATCTTGATATATGCATTATGAAGCCTAAACAGGTCTTGACATTTTCAGGGATATCTGCTAGGGAACCCCTGGACAACATACAAAGAAGATAACTATCAAATCCCATATGCTCATGGAATGGGACTCATCTCTGATGAACTCTACGCGGTAATATTATTACCAATTTAGTTTGTACATTTTGTCGGTGTAAATGCATCGAATCATATGTCACCATGTAGATATTTGTGAAGATATTTTAGGAAACTAATATCTACTGTTATCTATTGACAACAGTCACTGCAGAAAAATTGTAAAGGAGAGTACATTGATGTAGATTCCAGAAATGAGTTATGTTTAAGAGATCTTCAATACTTTGATGAGGCAAGTAAACCCTCCCAATTTTATCTATACCTATTATAAAGAGGATGCTAAATTTCAGCATTGTTTGCATTCGAGTTATGATGATAAACCCTTCTGTTTTTTCTTATCTTCAGTGTCTCTCAGGAATTAATAAGTTCAACATTTTAGCTAGCATTTGTAAAGATGATTTGCGTCTGAGGAGGAGATCTTTGACTCAGGAGCTGAACGCGTCTCTTAGTTCTCGTCTCACAGTCCCCGAATTAAGCTGCCACCGAGTAATTTTTTTCATAGCTTATCTAGATTAGGACACAATTTTTGTCCATAAGGTTTCAAATTTGATGTTATTCATTTTCATTATTCTTGTAGGATTATGGTTTTTACCTCGCCACTAAATGGATTGGCGATGAGAGTGTTCGCAAGGCACTGCATATTCGAGAGGTTTGATATAATAAACCTATAAACTTATTACGTCAGGTGGTTTTCTATGTTACATTACAAATACTTTAAATTTGAGTTGAATGCATCAAATGTACATAGCTTTGATCCATGTAGGGTACCATAGGAACATGGGAACGATGTTACACTACTGATTTTGAGTGTGAGATCTTTAGTACCGTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGGTGAAGATTTTCTCTTTCTAATGTAGAGTTTATTTCTTTTGAAACCGGTGTTGTTAGCATATAGATAGTGTTTTTCTTAGATAATAAAATCATATTTCAACACACTCATGAGCATCAATATCATACGATACATGTGAGTTATATCTCGATTCGCTACAAAATTAAGTCCAGCCAATACAAACCTCTAGTTTATATCTATTTTAAATATGAATTTCATCTTGAGTCCCGATACATTAAGATGAATCTCAATTCACTACGATGAATTCTGAATCGTTCTTATGAATCACTACCTGATCTTTGTGTAGCTAACCACTCCTTTTTTGTCAACTTTATATAACTAAGCACTTTTCTTTTGTCATTTGATTTGACTTAAATCTTGAATTATTTTGAGGTTAGTAGATGATATATTGGGTTATAATTATTCTATGTTGCTTGTTTTAACCTGAAAATGTCAGATTTGTATTGTTAATGTATACTACAATTTATATTAAGATTCTATTCATGATTTTAAAGTAGGTTTTTCGATTCACAAACTGATTCTCGATTTGATAACTATGAATACATTCACGATTTATTACGCATAACATCGCTGTTGAGATTACTTGTTTTACCCTCTAAAGTAAATTGTCCACGTTCGAGCAGTCAAATTCGTTTTTGTTATAGCTTTTTGGATGCCCTTAAGACTAATTGATTTTTTATGGCAATTGATGTGTTTTTTACAGTGGGGATCTTGATTTAATTGTTCCTTTCCAGTCTACTCAAGCATGGATAAGGGATCTAAACTACTCCATTGTAGAGGATTGGAGGTCATGGTTTGTAAATGGCCAAGTGGCAGGGTAAGCATCAACCTTCATATCAATGTTTTAAAAATTAGATTGAACCGAAAGTCAGCATATTCGCCGGTTGGCTTGATTCCAGTTTTATCATAGTCCCATTGAACTGGACTGAACCACAATCGAACCAGGTTGAATCAGTGTAACCGTATCGTTCGTTCATCGATTTTTATTTGTTTGCATTTTTTTCTCGCTTTCTTAGTACTTGTAATTTTTCATTTATTTATCTGTGCTCCGATCCAATTGAACATATTGAACCATAACATTGAAATTTAACTGGTTCGATCTCCGGTCCAATATTTAAAAAATTGCTTCCTAACCAAGTTTCTGAAGGTGCGTAGGATCTTAATCAGTAATTTCCTTTAACGCAGATACACAAGGACTTACTCGAACCGAATGACATATGCAACTGTGAAGGTAAGAAATTATTAATTAAATCACAAATGATATTTTGTTCTTTTAAGAAAAAACAGTCAATTTGGTGAAAACATTTAAGTGTCTTTGATGAGATTGTGCAATTTCCTTATATCAATTTTCATGTAATTAATTTTGCAGGGTTCAGGACATATAGCTCCTGAGTACACTCCTGAGCTATGTTTTCCCATGTTCTCTAGGTGGATATCTAATTTGCCATTGTAAATCAGAAGCCTAAGATGGCATAAGTATATGAGATGTTCATTTGTCAATGATTAAACAAACAGAAATGTAAAAAGGACAAGAAAATAATAATGTCAAGGTTTCATGTTTCAGTTGTTTCCTGATTCCATATTCTTCACATCTTTGCTAGGTTCTTAAGTTTTCACCGCGTTTAGCAATGGATAATCTCCATTGAAAAACTTGTGGGACACACAAGGTGGATTTCTCCTTCCAACCGAATTTTCTTTAAACGCGAGAGTCAGAGATTGAATCTTAAAACATTTGTTTAAAGAGTCTAAATCCCTTAATATTTTGAACAATTCATTGTCGATAATATTATTTATTTTATACATTAACATAAGTTGCTCACTTTAGAGTATCGACTAATATATGATATAATATTTGCGCCCATTTTTTCTTTCCTCTATAATTTTTTAGAGTGAGATTGGATGA
Protein sequence

>MS.gene80762.t1

MNMMAPPSHTSLHYSCQILLVLGLFCLHMSTPLEASRSKVEHLPGFQGPLPFELETGYVGLGETDDDMQVFYYFVKSENNPQKDPLMLWISGGPGCSSFSALAFQIGPFAFEIKEYNGSLPSLVSRPQSWTKICSIIFVDLPLGTGFSYAKNVKDYRSDWKLVHNTHQFLRKWLIDHPEFLSNEFYIGADSYSGIPVPPILQEISNGNEKSLQPLINLQGYLLGNPWTTYKEDNYQIPYAHGMGLISDELYASLQKNCKGEYIDVDSRNELCLRDLQYFDECLSGINKFNILASICKDDLRLRRRSLTQELNASLSSRLTVPELSCHRDYGFYLATKWIGDESVRKALHIREGTIGTWERCYTTDFECEIFSTVEFHANLSKKGYRSLIYSGDLDLIVPFQSTQAWIRDLNYSIVEDWRSWFVNGQVAGYTRTYSNRMTYATVKSEIG