AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054277


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054277.t1 MTR_6g043460 95.977 348 14 0 1 348 1 348 0.0 676
MS.gene054277.t1 MTR_6g043240 55.556 351 146 3 1 344 1 348 7.26e-137 393
MS.gene054277.t1 MTR_6g043280 52.648 321 151 1 10 330 15 334 1.84e-121 353
MS.gene054277.t1 MTR_5g058120 76.543 162 34 1 171 332 6 163 3.08e-84 256
MS.gene054277.t1 MTR_2g029750 42.056 321 171 7 36 343 29 347 1.45e-74 234
MS.gene054277.t1 MTR_2g029820 41.534 313 170 6 36 337 29 339 4.08e-74 233
MS.gene054277.t1 MTR_1g077000 41.522 289 165 2 36 324 39 323 9.08e-73 229
MS.gene054277.t1 MTR_4g087965 40.060 332 180 7 9 324 14 342 2.61e-72 228
MS.gene054277.t1 MTR_2g029815 40.439 319 175 7 31 337 24 339 7.92e-72 227
MS.gene054277.t1 MTR_7g086870 41.176 289 167 2 36 324 22 307 6.46e-70 221
MS.gene054277.t1 MTR_3g072190 38.217 314 190 4 13 324 3 314 8.60e-70 221
MS.gene054277.t1 MTR_7g029030 39.655 290 170 4 39 324 28 316 1.53e-69 220
MS.gene054277.t1 MTR_2g028980 42.122 311 165 8 36 334 29 336 2.26e-69 221
MS.gene054277.t1 MTR_3g094650 38.253 332 191 5 1 328 1 322 2.64e-69 220
MS.gene054277.t1 MTR_2g029560 41.667 300 162 6 36 324 24 321 3.25e-69 220
MS.gene054277.t1 MTR_4g132490 37.931 319 183 7 19 324 7 323 3.88e-68 217
MS.gene054277.t1 MTR_2g029740 40.645 310 171 6 36 334 29 336 4.94e-68 218
MS.gene054277.t1 MTR_4g029200 39.583 336 189 6 1 324 1 334 9.32e-68 216
MS.gene054277.t1 MTR_2g029850 39.812 319 179 6 36 343 29 345 4.99e-67 215
MS.gene054277.t1 MTR_7g072510 39.175 291 173 4 36 324 20 308 5.51e-67 213
MS.gene054277.t1 MTR_2g029730 40.064 312 172 7 36 335 25 333 6.57e-67 214
MS.gene054277.t1 MTR_1g090760 38.944 303 167 7 36 324 28 326 1.08e-66 213
MS.gene054277.t1 MTR_2g029830 38.509 322 180 7 36 341 28 347 1.10e-66 214
MS.gene054277.t1 MTR_1g086320 37.838 333 183 8 9 328 12 333 1.22e-66 213
MS.gene054277.t1 MTR_5g083860 36.280 328 196 5 5 328 7 325 1.24e-66 213
MS.gene054277.t1 MTR_2g029800 37.700 313 182 6 36 337 29 339 1.45e-66 214
MS.gene054277.t1 MTR_0155s0040 37.755 294 171 3 35 324 26 311 2.03e-66 212
MS.gene054277.t1 MTR_5g017860 39.803 304 172 4 30 324 21 322 2.53e-66 212
MS.gene054277.t1 MTR_5g021060 38.796 299 173 5 40 329 34 331 6.21e-66 211
MS.gene054277.t1 MTR_8g062780 37.209 301 178 4 39 329 26 325 6.33e-66 211
MS.gene054277.t1 MTR_4g029190 42.759 290 159 5 40 324 49 336 1.15e-65 211
MS.gene054277.t1 MTR_1g054205 39.286 308 169 8 31 324 19 322 1.38e-65 210
MS.gene054277.t1 MTR_5g022870 38.796 299 168 6 34 324 21 312 1.67e-65 210
MS.gene054277.t1 MTR_2g029910 41.528 301 162 6 36 324 30 328 3.93e-65 210
MS.gene054277.t1 MTR_2g029860 39.748 317 176 7 36 340 29 342 5.72e-65 209
MS.gene054277.t1 MTR_2g008710 39.869 306 168 6 34 328 25 325 7.61e-65 208
MS.gene054277.t1 MTR_8g075100 39.731 297 164 6 36 324 26 315 9.04e-65 208
MS.gene054277.t1 MTR_4g046713 34.441 331 199 6 3 324 1 322 9.71e-65 208
MS.gene054277.t1 MTR_1g038680 37.500 296 174 4 40 324 33 328 1.09e-64 208
MS.gene054277.t1 MTR_2g084080 38.889 288 172 4 39 324 28 313 2.91e-64 206
MS.gene054277.t1 MTR_5g014100 38.689 305 168 7 36 324 26 327 6.29e-64 206
MS.gene054277.t1 MTR_5g017850 38.636 308 178 4 30 328 21 326 7.81e-64 206
MS.gene054277.t1 MTR_4g127670 39.934 303 169 5 36 328 24 323 9.19e-64 206
MS.gene054277.t1 MTR_3g094670 37.425 334 191 6 1 328 1 322 1.19e-63 205
MS.gene054277.t1 MTR_4g095450 38.776 294 175 4 36 324 27 320 1.59e-63 205
MS.gene054277.t1 MTR_1g009750 38.127 299 174 5 36 324 27 324 2.81e-63 204
MS.gene054277.t1 MTR_4g122640 39.394 297 170 6 36 324 38 332 3.10e-63 204
MS.gene054277.t1 MTR_2g084110 36.909 317 188 5 10 324 7 313 4.86e-63 203
MS.gene054277.t1 MTR_3g092990 37.793 299 174 5 36 324 26 322 9.40e-63 203
MS.gene054277.t1 MTR_1g086490 36.336 333 190 6 16 328 10 340 1.27e-62 203
MS.gene054277.t1 MTR_7g072480 38.644 295 177 4 36 328 24 316 5.13e-62 201
MS.gene054277.t1 MTR_5g074970 36.145 332 194 7 1 324 1 322 1.27e-61 200
MS.gene054277.t1 MTR_8g076820 37.500 296 171 6 40 324 34 326 1.86e-61 200
MS.gene054277.t1 MTR_4g029170 37.710 297 179 5 36 328 27 321 1.93e-61 199
MS.gene054277.t1 MTR_7g107520 35.494 324 191 9 14 328 6 320 2.40e-61 199
MS.gene054277.t1 MTR_2g084090 38.062 289 174 4 39 324 28 314 5.07e-61 198
MS.gene054277.t1 MTR_6g027440 36.393 305 183 4 30 328 15 314 8.72e-61 197
MS.gene054277.t1 MTR_5g016010 35.294 323 198 5 12 324 4 325 1.86e-60 197
MS.gene054277.t1 MTR_2g088770 36.184 304 181 7 36 329 26 326 2.08e-60 197
MS.gene054277.t1 MTR_4g030890 36.667 300 176 7 40 330 104 398 2.53e-60 199
MS.gene054277.t1 MTR_3g105790 35.821 335 192 6 4 328 1 322 1.02e-59 195
MS.gene054277.t1 MTR_3g094630 37.126 334 192 6 1 328 1 322 1.08e-59 195
MS.gene054277.t1 MTR_4g031140 35.621 306 183 7 40 336 32 332 1.86e-59 195
MS.gene054277.t1 MTR_4g114210 39.203 301 166 5 36 324 21 316 2.29e-59 194
MS.gene054277.t1 MTR_4g125940 37.874 301 172 6 36 324 28 325 2.57e-59 194
MS.gene054277.t1 MTR_2g040000 37.346 324 183 8 14 324 11 327 2.92e-59 194
MS.gene054277.t1 MTR_1g066380 32.776 299 193 4 32 324 23 319 3.99e-59 194
MS.gene054277.t1 MTR_1g025980 35.514 321 188 6 12 324 5 314 4.29e-59 193
MS.gene054277.t1 MTR_2g437770 36.149 296 174 6 36 324 50 337 7.65e-59 193
MS.gene054277.t1 MTR_1g115900 36.928 306 187 5 36 337 27 330 8.34e-59 193
MS.gene054277.t1 MTR_3g466200 37.755 294 176 4 36 324 25 316 8.64e-59 192
MS.gene054277.t1 MTR_7g086820 37.255 306 182 5 30 330 14 314 1.26e-58 192
MS.gene054277.t1 MTR_7g093370 37.459 307 176 8 31 324 64 367 1.50e-58 194
MS.gene054277.t1 MTR_1g022970 39.000 300 172 5 35 324 45 343 1.96e-58 192
MS.gene054277.t1 MTR_2g084020 35.220 318 193 6 10 324 7 314 5.80e-58 190
MS.gene054277.t1 MTR_3g466180 36.792 318 186 6 10 324 14 319 6.11e-58 191
MS.gene054277.t1 MTR_4g132110 33.775 302 192 4 35 330 31 330 1.03e-57 190
MS.gene054277.t1 MTR_4g083710 37.685 337 186 9 3 328 1 324 1.76e-57 189
MS.gene054277.t1 MTR_2g084010 35.535 318 192 6 10 324 7 314 9.90e-57 187
MS.gene054277.t1 MTR_0286s0010 35.570 298 182 5 36 324 34 330 1.59e-56 187
MS.gene054277.t1 MTR_6g008075 35.570 298 182 5 36 324 34 330 1.59e-56 187
MS.gene054277.t1 MTR_4g132110 33.550 307 191 5 35 330 31 335 2.52e-56 187
MS.gene054277.t1 MTR_4g133800 37.457 291 168 5 41 324 46 329 2.68e-56 186
MS.gene054277.t1 MTR_5g049280 35.671 328 194 7 10 324 10 333 5.86e-56 186
MS.gene054277.t1 MTR_4g074995 36.760 321 175 7 15 328 9 308 7.11e-56 184
MS.gene054277.t1 MTR_7g026990 34.965 286 183 3 40 324 35 318 2.83e-55 184
MS.gene054277.t1 MTR_2g084000 34.277 318 197 6 10 324 7 315 4.25e-55 183
MS.gene054277.t1 MTR_2g099175 34.743 331 198 6 10 328 11 335 4.55e-55 183
MS.gene054277.t1 MTR_2g067440 35.780 327 169 6 36 324 60 383 5.02e-55 185
MS.gene054277.t1 MTR_1g066640 32.203 295 192 4 36 324 27 319 5.10e-55 183
MS.gene054277.t1 MTR_1g101830 33.837 331 199 5 1 324 1 318 1.34e-54 182
MS.gene054277.t1 MTR_1g066680 33.559 295 187 5 36 324 27 318 1.48e-54 182
MS.gene054277.t1 MTR_2g029830 38.628 277 152 7 81 341 5 279 1.49e-54 181
MS.gene054277.t1 MTR_2g078610 35.258 329 171 6 36 324 76 402 3.71e-54 183
MS.gene054277.t1 MTR_2g077990 35.258 329 171 6 36 324 76 402 5.20e-54 182
MS.gene054277.t1 MTR_1g009750 34.472 322 183 8 11 324 6 307 6.96e-54 179
MS.gene054277.t1 MTR_1g066710 32.432 296 190 5 36 324 27 319 1.00e-53 179
MS.gene054277.t1 MTR_3g072190 39.837 246 144 4 81 324 4 247 1.44e-53 177
MS.gene054277.t1 MTR_4g029180 35.034 294 185 5 39 328 30 321 2.79e-53 178
MS.gene054277.t1 MTR_3g092990 35.786 299 169 6 36 324 26 311 2.96e-53 178
MS.gene054277.t1 MTR_4g074990 36.877 301 163 6 36 328 24 305 2.35e-52 175
MS.gene054277.t1 MTR_4g125940 38.577 267 149 6 70 324 7 270 8.82e-52 173
MS.gene054277.t1 MTR_5g074760 33.846 325 198 8 7 324 3 317 1.16e-49 169
MS.gene054277.t1 MTR_3g467600 35.780 327 181 12 11 324 10 320 7.99e-49 167
MS.gene054277.t1 MTR_5g074860 34.769 325 190 11 10 324 9 321 1.78e-48 166
MS.gene054277.t1 MTR_2g078280 34.483 319 167 6 36 314 76 392 2.24e-48 167
MS.gene054277.t1 MTR_5g074740 33.846 325 198 8 7 324 3 317 6.72e-48 164
MS.gene054277.t1 MTR_1g066380 34.000 250 157 4 81 324 4 251 3.66e-47 160
MS.gene054277.t1 MTR_5g074710 33.223 301 191 7 31 324 20 317 7.27e-45 156
MS.gene054277.t1 MTR_2g008730 34.314 306 161 6 34 328 25 301 8.82e-45 155
MS.gene054277.t1 MTR_4g074980 39.056 233 130 5 36 260 25 253 1.39e-44 154
MS.gene054277.t1 MTR_2g067450 34.754 305 174 9 36 324 11 306 6.44e-44 154
MS.gene054277.t1 MTR_4g074980 33.898 295 168 7 36 328 25 294 1.13e-43 152
MS.gene054277.t1 MTR_2g008160 33.224 304 188 5 36 328 24 323 1.90e-43 152
MS.gene054277.t1 MTR_5g033470 32.248 307 192 7 36 328 73 377 3.97e-43 153
MS.gene054277.t1 MTR_0147s0010 33.962 318 165 8 36 324 77 378 1.97e-42 151
MS.gene054277.t1 MTR_3g105790 38.158 228 131 3 111 328 19 246 3.30e-41 145
MS.gene054277.t1 MTR_2g029880 38.378 185 96 5 149 324 9 184 9.24e-33 121
MS.gene054277.t1 MTR_3g072210 38.503 187 110 5 146 328 53 238 2.07e-32 121
MS.gene054277.t1 MTR_2g008160 29.431 299 171 5 36 328 24 288 1.02e-31 120
MS.gene054277.t1 MTR_5g074860 30.581 327 162 14 10 324 9 282 1.66e-30 117
MS.gene054277.t1 MTR_5g074700 34.247 219 127 6 110 324 5 210 1.44e-29 113
MS.gene054277.t1 MTR_1g098320 52.577 97 45 1 249 344 45 141 1.87e-27 105
MS.gene054277.t1 MTR_2g008160 34.463 177 112 2 36 212 24 196 1.71e-26 104
MS.gene054277.t1 MTR_7g072490 32.895 228 97 5 81 307 1 173 5.40e-25 100
MS.gene054277.t1 MTR_3g072260 38.168 131 78 2 14 144 6 133 7.84e-23 93.2
MS.gene054277.t1 MTR_2g078560 30.093 216 112 4 148 324 101 316 2.73e-22 95.9
MS.gene054277.t1 MTR_7g086790 31.915 188 113 5 83 270 17 189 4.96e-16 75.9
MS.gene054277.t1 MTR_2g077980 28.571 273 146 9 98 324 11 280 5.82e-16 77.4
MS.gene054277.t1 MTR_4g114220 47.059 85 34 2 60 144 27 100 1.53e-15 73.2
MS.gene054277.t1 MTR_4g012865 51.562 64 31 0 36 99 77 140 2.03e-15 73.2
MS.gene054277.t1 MTR_7g107500 39.326 89 53 1 236 324 6 93 4.83e-13 64.7
MS.gene054277.t1 MTR_3g462850 31.387 137 82 4 200 324 9 145 7.04e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054277.t1 AT1G71695 44.011 359 186 5 3 348 1 357 3.83e-102 305
MS.gene054277.t1 AT4G33420 40.256 313 183 2 16 328 17 325 3.29e-74 233
MS.gene054277.t1 AT4G33420 40.256 313 183 2 16 328 64 372 1.23e-73 233
MS.gene054277.t1 AT5G14130 37.846 325 185 4 11 328 16 330 1.06e-72 229
MS.gene054277.t1 AT5G14130 37.846 325 185 4 11 328 57 371 3.52e-72 229
MS.gene054277.t1 AT4G08770 40.498 321 177 7 40 348 28 346 1.50e-71 226
MS.gene054277.t1 AT4G37520 38.944 303 175 4 36 328 27 329 6.95e-70 221
MS.gene054277.t1 AT5G64120 38.806 335 191 6 1 328 1 328 7.13e-70 221
MS.gene054277.t1 AT4G08780 40.187 321 178 7 40 348 28 346 1.89e-69 221
MS.gene054277.t1 AT5G06730 36.364 341 204 6 4 334 3 340 5.82e-69 220
MS.gene054277.t1 AT2G18980 40.432 324 171 8 13 324 6 319 4.07e-68 217
MS.gene054277.t1 AT4G37520 38.614 303 173 5 36 328 27 326 5.45e-68 216
MS.gene054277.t1 AT4G37530 38.284 303 177 4 36 328 27 329 6.41e-68 216
MS.gene054277.t1 AT5G19880 40.000 305 163 6 36 324 25 325 5.70e-67 214
MS.gene054277.t1 AT5G15180 36.145 332 197 7 1 324 1 325 1.32e-66 213
MS.gene054277.t1 AT3G32980 36.975 357 200 9 1 344 1 345 8.08e-66 212
MS.gene054277.t1 AT3G03670 36.808 307 184 4 30 328 17 321 1.05e-64 208
MS.gene054277.t1 AT5G58400 37.690 329 190 6 5 328 7 325 2.19e-64 207
MS.gene054277.t1 AT2G38390 38.872 337 188 8 5 330 6 335 2.52e-64 208
MS.gene054277.t1 AT5G40150 37.710 297 181 3 36 328 32 328 2.63e-64 207
MS.gene054277.t1 AT3G49120 36.812 345 194 8 12 344 14 346 2.75e-64 208
MS.gene054277.t1 AT3G50990 36.842 304 178 7 32 324 37 337 3.22e-64 207
MS.gene054277.t1 AT2G18140 36.721 305 183 5 34 329 33 336 4.83e-64 207
MS.gene054277.t1 AT5G06720 35.826 321 193 6 14 324 12 329 4.87e-64 207
MS.gene054277.t1 AT3G28200 37.374 297 181 3 36 328 21 316 5.64e-64 206
MS.gene054277.t1 AT2G38380 38.872 337 188 8 5 330 6 335 6.68e-64 207
MS.gene054277.t1 AT2G24800 37.377 305 173 6 36 328 31 329 7.34e-64 206
MS.gene054277.t1 AT1G24110 37.195 328 192 6 13 331 3 325 9.93e-64 206
MS.gene054277.t1 AT2G18150 36.120 299 181 5 40 329 40 337 9.98e-64 206
MS.gene054277.t1 AT2G22420 37.662 308 176 8 40 337 27 328 1.02e-63 206
MS.gene054277.t1 AT3G49110 37.855 317 179 7 40 344 37 347 1.05e-63 206
MS.gene054277.t1 AT4G30170 38.796 299 169 5 36 324 27 321 1.38e-63 205
MS.gene054277.t1 AT5G19890 38.889 306 168 7 36 329 30 328 1.92e-63 205
MS.gene054277.t1 AT1G49570 40.461 304 167 6 36 327 48 349 2.51e-63 205
MS.gene054277.t1 AT3G01190 34.639 332 199 6 4 328 1 321 3.60e-63 204
MS.gene054277.t1 AT4G36430 36.395 294 177 5 40 324 34 326 3.98e-63 204
MS.gene054277.t1 AT4G16270 40.468 299 164 8 36 324 50 344 4.93e-63 204
MS.gene054277.t1 AT3G17070 36.877 301 177 5 35 324 37 335 1.73e-62 202
MS.gene054277.t1 AT5G66390 37.500 296 171 6 40 324 37 329 1.14e-61 201
MS.gene054277.t1 AT5G51890 35.913 323 188 5 7 321 4 315 1.86e-61 199
MS.gene054277.t1 AT5G67400 37.294 303 180 4 36 328 27 329 2.34e-61 199
MS.gene054277.t1 AT5G05340 37.458 299 177 5 36 328 30 324 3.16e-61 199
MS.gene054277.t1 AT2G41480 36.364 330 189 6 11 328 8 328 3.31e-61 199
MS.gene054277.t1 AT3G49960 37.954 303 178 5 36 328 27 329 3.56e-61 199
MS.gene054277.t1 AT2G34060 35.380 342 203 8 1 324 1 342 3.66e-61 199
MS.gene054277.t1 AT4G17690 37.874 301 180 4 28 324 21 318 1.69e-60 197
MS.gene054277.t1 AT2G35380 36.765 340 188 9 3 324 1 331 5.47e-60 196
MS.gene054277.t1 AT1G14540 36.986 292 180 4 40 328 25 315 6.00e-60 195
MS.gene054277.t1 AT5G39580 38.689 305 169 7 34 328 23 319 6.16e-60 196
MS.gene054277.t1 AT1G44970 39.465 299 170 5 40 328 49 346 1.02e-59 196
MS.gene054277.t1 AT5G42180 35.667 300 179 5 33 324 20 313 1.13e-59 195
MS.gene054277.t1 AT5G17820 37.209 301 174 5 30 324 18 309 2.10e-59 194
MS.gene054277.t1 AT5G47000 36.728 324 192 5 12 329 15 331 3.38e-59 194
MS.gene054277.t1 AT1G14550 36.137 321 192 6 9 324 5 317 3.55e-59 194
MS.gene054277.t1 AT1G05240 36.634 303 179 6 36 328 26 325 3.56e-59 194
MS.gene054277.t1 AT1G05250 36.634 303 179 6 36 328 26 325 3.56e-59 194
MS.gene054277.t1 AT2G39040 37.829 304 171 10 36 324 46 346 4.38e-59 194
MS.gene054277.t1 AT1G30870 38.889 306 167 8 36 330 51 347 4.80e-59 194
MS.gene054277.t1 AT4G11290 35.216 301 180 8 36 324 25 322 1.97e-58 192
MS.gene054277.t1 AT5G58390 35.625 320 191 6 15 328 6 316 2.19e-58 191
MS.gene054277.t1 AT5G17820 37.209 301 174 5 30 324 71 362 2.95e-58 192
MS.gene054277.t1 AT4G21960 34.494 316 199 4 19 328 14 327 6.19e-58 191
MS.gene054277.t1 AT4G26010 36.964 303 180 6 30 329 16 310 1.11e-57 189
MS.gene054277.t1 AT4G26010 36.964 303 180 6 30 329 44 338 1.33e-57 190
MS.gene054277.t1 AT1G05260 31.722 331 204 7 9 329 8 326 4.52e-57 188
MS.gene054277.t1 AT4G37530 39.919 248 139 4 39 276 30 277 7.57e-57 186
MS.gene054277.t1 AT5G24070 33.923 339 197 7 11 328 3 335 9.37e-57 188
MS.gene054277.t1 AT3G21770 33.775 302 181 8 36 324 29 324 1.09e-56 187
MS.gene054277.t1 AT1G68850 34.139 331 202 7 8 324 3 331 6.34e-56 186
MS.gene054277.t1 AT4G31760 34.718 337 197 7 4 328 1 326 3.02e-55 184
MS.gene054277.t1 AT2G37130 32.770 296 190 6 36 324 30 323 3.35e-54 181
MS.gene054277.t1 AT2G37130 32.765 293 188 6 39 324 2 292 6.80e-54 179
MS.gene054277.t1 AT5G64110 37.124 299 172 6 40 328 38 330 3.59e-53 178
MS.gene054277.t1 AT4G33870 33.434 332 176 6 36 324 68 397 6.30e-53 180
MS.gene054277.t1 AT1G77100 36.120 299 182 5 36 328 24 319 7.01e-53 177
MS.gene054277.t1 AT5G22410 34.967 306 180 9 36 329 28 326 4.58e-51 173
MS.gene054277.t1 AT5G64100 35.235 298 177 6 40 328 41 331 2.62e-50 171
MS.gene054277.t1 AT2G43480 30.650 323 200 6 18 324 17 331 2.72e-50 171
MS.gene054277.t1 AT1G34510 33.882 304 188 7 30 329 16 310 2.25e-48 165
MS.gene054277.t1 AT4G25980 32.459 305 190 5 36 328 26 326 2.02e-46 160
MS.gene054277.t1 AT3G17070 35.433 254 151 5 82 324 21 272 4.03e-45 155
MS.gene054277.t1 AT2G35380 37.551 245 130 8 98 324 4 243 1.97e-42 148
MS.gene054277.t1 AT2G24800 38.596 171 99 3 36 205 31 196 5.04e-32 120
MS.gene054277.t1 AT5G39580 37.297 185 105 4 34 215 23 199 2.63e-29 113
MS.gene054277.t1 AT4G25980 35.294 170 106 2 36 205 71 236 8.44e-27 107
MS.gene054277.t1 AT4G32320 27.953 254 126 7 65 307 112 319 9.52e-15 74.7
MS.gene054277.t1 AT3G42570 34.314 102 63 3 104 203 50 149 3.04e-11 61.2

Find 69 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGTTAAAATACTCTTTC+TGG 0.106097 6.1:+25452413 None:intergenic
ACCTTAGATTTCCTATTATT+TGG 0.128939 6.1:+25452310 None:intergenic
ATGATGCCAACTTCGCTTTA+AGG 0.164350 6.1:-25453634 MS.gene054277:CDS
ATCCCTCAACGCCATTAATT+TGG 0.170957 6.1:-25452569 MS.gene054277:CDS
TCGAGTTGTTTCTTGAAATT+TGG 0.220080 6.1:+25452613 None:intergenic
CCCAATGGCACGTCGAAATC+TGG 0.235627 6.1:+25452841 None:intergenic
CTATCTGGTGCTCACACTTT+TGG 0.254398 6.1:-25452694 MS.gene054277:CDS
TTCACAATCTCCTTAGTCTT+AGG 0.327909 6.1:+25452451 None:intergenic
TGTTCGAAGATCCAAATTAA+TGG 0.329537 6.1:+25452558 None:intergenic
CTTACAATCCTTTCAATCCT+AGG 0.351971 6.1:+25454758 None:intergenic
CTGCGTTTACACTGAAGTTT+AGG 0.353797 6.1:+25452806 None:intergenic
TCCAAATAATAGGAAATCTA+AGG 0.367020 6.1:-25452311 MS.gene054277:CDS
GCGTTGAGGGATTCCTCATT+TGG 0.369444 6.1:+25452580 None:intergenic
TGATGCCAACTTCGCTTTAA+GGG 0.384442 6.1:-25453633 MS.gene054277:CDS
ACCGATGTAGTTGCTCTATC+TGG 0.387253 6.1:-25452709 MS.gene054277:CDS
CTTGAATTTGTACAGTTTGG+AGG 0.394165 6.1:-25452865 MS.gene054277:intron
GACTAGACTATGATTTCTAT+TGG 0.405781 6.1:-25454790 MS.gene054277:CDS
TCTGTTCGTGCAAATGGTAC+TGG 0.412087 6.1:+25452772 None:intergenic
AGTTCATCTGTTCGTGCAAA+TGG 0.412175 6.1:+25452766 None:intergenic
TCTATTGGTTGTCATGTCCT+AGG 0.414428 6.1:-25454775 MS.gene054277:CDS
TTGAAATTTGGTTCGATTGG+TGG 0.414542 6.1:+25452625 None:intergenic
TACATATTATCGAATGTGTT+TGG 0.420413 6.1:+25452535 None:intergenic
ATGATTCGGTTGAACATTGT+AGG 0.430995 6.1:+25452658 None:intergenic
CCCAGATTTCGACGTGCCAT+TGG 0.435757 6.1:-25452842 MS.gene054277:CDS
ATCCAAATTAATGGCGTTGA+GGG 0.443471 6.1:+25452567 None:intergenic
TTCTTGAAATTTGGTTCGAT+TGG 0.452274 6.1:+25452622 None:intergenic
TGAAATTTGGTTCGATTGGT+GGG 0.456433 6.1:+25452626 None:intergenic
GGCAAGTCATCCTAAGACTA+AGG 0.457751 6.1:-25452461 MS.gene054277:CDS
CTCCTCCCTTAAAGCGAAGT+TGG 0.465950 6.1:+25453628 None:intergenic
CTAGGATTGAAAGGATTGTA+AGG 0.474721 6.1:-25454757 MS.gene054277:CDS
CCAATGGCACGTCGAAATCT+GGG 0.485034 6.1:+25452842 None:intergenic
CCAGATTTCGACGTGCCATT+GGG 0.485131 6.1:-25452841 MS.gene054277:CDS
CAACTCGTGGACATTGCTTA+CGG 0.486794 6.1:+25453570 None:intergenic
GTGGGTCGGAATCAATGATT+CGG 0.494863 6.1:+25452644 None:intergenic
ATTTGGTTCGATTGGTGGGT+CGG 0.505282 6.1:+25452630 None:intergenic
ATACCTGAGAAAAGCAATCA+TGG 0.505284 6.1:+25454669 None:intergenic
CTGTTCGTGCAAATGGTACT+GGG 0.511334 6.1:+25452773 None:intergenic
AACTGTGGTGGAAGAGGTGG+TGG 0.511426 6.1:-25452284 MS.gene054277:CDS
AAGGATAGTGGTCAAGCTCC+TGG 0.512801 6.1:-25454710 MS.gene054277:CDS
AGCAAGGCCTCCTGCTGTGA+GGG 0.513672 6.1:-25454813 MS.gene054277:CDS
CATTAACCTCTTGAATCACC+AGG 0.518011 6.1:-25452509 MS.gene054277:CDS
GGTGGCAACTGTGGTGGAAG+AGG 0.526504 6.1:-25452290 MS.gene054277:CDS
TAGTCTAGTCCCCTCACAGC+AGG 0.532120 6.1:+25454803 None:intergenic
CGAAGCTACATGTCCAAATG+AGG 0.532288 6.1:-25452593 MS.gene054277:CDS
CAACTTCGCTTTAAGGGAGG+AGG 0.538343 6.1:-25453627 MS.gene054277:CDS
GTTTACATCGGATCAAGACT+TGG 0.546163 6.1:-25452482 MS.gene054277:CDS
TGTCATGTCCTAGGATTGAA+AGG 0.547029 6.1:-25454766 MS.gene054277:CDS
GGCAACTGTGGTGGAAGAGG+TGG 0.550249 6.1:-25452287 MS.gene054277:CDS
CTTTCTGGTTAGAAGCAAAG+AGG 0.554580 6.1:+25452428 None:intergenic
CTACTCTCTTAGAAGAAACA+AGG 0.558779 6.1:+25454834 None:intergenic
GAAATCTAAGGTGGCAACTG+TGG 0.568673 6.1:-25452299 MS.gene054277:CDS
ATCTAAGGTGGCAACTGTGG+TGG 0.573223 6.1:-25452296 MS.gene054277:CDS
CTTCGCGTGCGGCAATGACA+AGG 0.578317 6.1:+25453531 None:intergenic
TCTGCGCACGAGACAACTCG+TGG 0.586025 6.1:+25453557 None:intergenic
TTGGCGAACAGCTTCGCGTG+CGG 0.605023 6.1:+25453520 None:intergenic
GATCCAAATTAATGGCGTTG+AGG 0.610820 6.1:+25452566 None:intergenic
TTTCTTCTAAGAGAGTAGCA+AGG 0.617930 6.1:-25454829 MS.gene054277:CDS
GCAAGGCCTCCTGCTGTGAG+GGG 0.634072 6.1:-25454812 MS.gene054277:CDS
TCTAGTCCCCTCACAGCAGG+AGG 0.636097 6.1:+25454806 None:intergenic
TGCCAACTTCGCTTTAAGGG+AGG 0.642027 6.1:-25453630 MS.gene054277:CDS
AAATAATAGGAAATCTAAGG+TGG 0.648910 6.1:-25452308 MS.gene054277:CDS
CTAAACTTCAGTGTAAACGC+AGG 0.651693 6.1:-25452805 MS.gene054277:CDS
TAGCAAGGCCTCCTGCTGTG+AGG 0.654852 6.1:-25454814 MS.gene054277:CDS
ACACACCCTGGTGATTCAAG+AGG 0.659078 6.1:+25452503 None:intergenic
TCACCAGGGTGTGTTTACAT+CGG 0.667869 6.1:-25452494 MS.gene054277:CDS
GATCCGATGTAAACACACCC+TGG 0.671264 6.1:+25452491 None:intergenic
ACCAGATAGAGCAACTACAT+CGG 0.673269 6.1:+25452708 None:intergenic
ATTAACCTCTTGAATCACCA+GGG 0.706268 6.1:-25452508 MS.gene054277:CDS
GCTTACGGATTATAACACGA+AGG 0.713016 6.1:+25453585 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAGAAATAGTTTAT+TGG + chr6.1:25452923-25452942 None:intergenic 10.0%
!! TAAATTCAATTAACAAAAAT+GGG + chr6.1:25452735-25452754 None:intergenic 10.0%
!! TTAAATTCAATTAACAAAAA+TGG + chr6.1:25452736-25452755 None:intergenic 10.0%
!! AATTCATTACTTATTGAAAA+TGG + chr6.1:25452603-25452622 None:intergenic 15.0%
!! ACATATATGACAATTATAAT+TGG - chr6.1:25453849-25453868 MS.gene054277:intron 15.0%
!! CTGAAGAAAAAAAAAATTAA+AGG + chr6.1:25453226-25453245 None:intergenic 15.0%
!! CTTATAAGTTAATAAACAAA+AGG - chr6.1:25452982-25453001 MS.gene054277:intron 15.0%
!! TGTTGTTCTTTATTATTAAT+AGG + chr6.1:25453172-25453191 None:intergenic 15.0%
!!! AAAATATGCTTTGAAATAAA+TGG + chr6.1:25453267-25453286 None:intergenic 15.0%
!!! AAAGATTAAATGTTGATTTT+TGG - chr6.1:25453432-25453451 MS.gene054277:intron 15.0%
!!! AAAGTTAATTTTGAACAAAA+AGG - chr6.1:25453126-25453145 MS.gene054277:intron 15.0%
!!! AAATATGCTTTGAAATAAAT+GGG + chr6.1:25453266-25453285 None:intergenic 15.0%
!!! ATAATGATTTTAATAGTAAC+TGG - chr6.1:25452631-25452650 MS.gene054277:CDS 15.0%
!!! ATTATTGAATCATATTTTAG+AGG + chr6.1:25452571-25452590 None:intergenic 15.0%
!!! CAACATTTAATCTTTTTAAA+TGG + chr6.1:25453427-25453446 None:intergenic 15.0%
!!! TTAGAGAATATTTATTCTTT+TGG + chr6.1:25452847-25452866 None:intergenic 15.0%
!! ACACATAAATAGAAATTACT+TGG + chr6.1:25453659-25453678 None:intergenic 20.0%
!! ATAATTGTCATATATGTATG+TGG + chr6.1:25453846-25453865 None:intergenic 20.0%
!! GTAAATTATTTACACTGATA+GGG - chr6.1:25454117-25454136 MS.gene054277:intron 20.0%
!! TAAAACTTATTAGAAGTAAG+AGG - chr6.1:25452675-25452694 MS.gene054277:CDS 20.0%
!! TATTATTAATAGGCTTAACT+GGG + chr6.1:25453162-25453181 None:intergenic 20.0%
!! TGTAAATTATTTACACTGAT+AGG - chr6.1:25454116-25454135 MS.gene054277:intron 20.0%
!! TTATTATTAATAGGCTTAAC+TGG + chr6.1:25453163-25453182 None:intergenic 20.0%
!!! AAATTTTTTTGATCCGAAAA+CGG + chr6.1:25454422-25454441 None:intergenic 20.0%
!!! ACATAGTATTGTTTTAGTTA+AGG + chr6.1:25454183-25454202 None:intergenic 20.0%
!!! ATTCATTAACTTGTGTTTTA+AGG - chr6.1:25452943-25452962 MS.gene054277:intron 20.0%
!!! ATTTGTTAAAATACTCTTTC+TGG + chr6.1:25454747-25454766 None:intergenic 20.0%
!!! ATTTTGTTTTTCTTATGTGT+TGG + chr6.1:25453034-25453053 None:intergenic 20.0%
!!! TCTCTTTTATTTCTTCTTTT+TGG - chr6.1:25453683-25453702 MS.gene054277:CDS 20.0%
!!! TTTTGTTTTTCTTATGTGTT+GGG + chr6.1:25453033-25453052 None:intergenic 20.0%
! AAATAATAGGAAATCTAAGG+TGG - chr6.1:25454849-25454868 MS.gene054277:CDS 25.0%
! ACATCCATAAAAAAGAAAGT+AGG + chr6.1:25452536-25452555 None:intergenic 25.0%
! ACCTTAGATTTCCTATTATT+TGG + chr6.1:25454850-25454869 None:intergenic 25.0%
! ATATAAGTGCTAAGATTGAA+AGG - chr6.1:25452773-25452792 MS.gene054277:CDS 25.0%
! CATCCATAAAAAAGAAAGTA+GGG + chr6.1:25452535-25452554 None:intergenic 25.0%
! CTTTGCGATTAAAATAATTG+AGG + chr6.1:25453975-25453994 None:intergenic 25.0%
! TACATATTATCGAATGTGTT+TGG + chr6.1:25454625-25454644 None:intergenic 25.0%
! TCAATCTTAGCACTTATATA+TGG + chr6.1:25452772-25452791 None:intergenic 25.0%
! TCCAAATAATAGGAAATCTA+AGG - chr6.1:25454846-25454865 MS.gene054277:CDS 25.0%
! TGAAAGGATACATAAGTTAA+GGG - chr6.1:25452789-25452808 MS.gene054277:CDS 25.0%
! TTGAAAGGATACATAAGTTA+AGG - chr6.1:25452788-25452807 MS.gene054277:CDS 25.0%
!! AAAATTCGATTTTTGAATCG+AGG - chr6.1:25453099-25453118 MS.gene054277:intron 25.0%
!! ATATGCTTAGTTGCATTTTT+AGG + chr6.1:25454210-25454229 None:intergenic 25.0%
!! TTTATATGGCTGATATGTTT+TGG + chr6.1:25453010-25453029 None:intergenic 25.0%
!!! AAACCCTACTTTCTTTTTTA+TGG - chr6.1:25452529-25452548 MS.gene054277:CDS 25.0%
!!! ATTTGCTAATGCTTTTGTTA+AGG - chr6.1:25454765-25454784 MS.gene054277:CDS 25.0%
!!! GAACATCATTCATACTTTTT+TGG - chr6.1:25454237-25454256 MS.gene054277:intron 25.0%
!!! TCTTGAAGATGTTTTTGAAA+AGG - chr6.1:25452428-25452447 MS.gene054277:CDS 25.0%
!!! TGTCTTATTTTCACTTTACA+CGG - chr6.1:25454142-25454161 MS.gene054277:intron 25.0%
!!! TTGATTTTTGGATTGAAACA+GGG - chr6.1:25453444-25453463 MS.gene054277:intron 25.0%
!!! TTTTGTTAAGGTTAGTCAAT+TGG - chr6.1:25454777-25454796 MS.gene054277:CDS 25.0%
ATATATGTATGTGGTGGTAT+TGG + chr6.1:25453837-25453856 None:intergenic 30.0%
ATTGTCATATATGTATGTGG+TGG + chr6.1:25453843-25453862 None:intergenic 30.0%
ATTTACACAGATGACCAAAT+AGG + chr6.1:25454103-25454122 None:intergenic 30.0%
GACTAGACTATGATTTCTAT+TGG - chr6.1:25452367-25452386 MS.gene054277:CDS 30.0%
TCTTATGTGTTGGGTTTATA+TGG + chr6.1:25453024-25453043 None:intergenic 30.0%
TGTAAGTAAAAAGATCGTGT+AGG + chr6.1:25453373-25453392 None:intergenic 30.0%
TGTTCGAAGATCCAAATTAA+TGG + chr6.1:25454602-25454621 None:intergenic 30.0%
TTCCTTGAATTTGTACAGTT+TGG - chr6.1:25454289-25454308 MS.gene054277:intron 30.0%
! ATTTTGTTGAATGGCGTTAA+TGG - chr6.1:25453480-25453499 MS.gene054277:intron 30.0%
! CATGTTTTGCTCCAAATAAT+AGG - chr6.1:25454836-25454855 MS.gene054277:CDS 30.0%
! GATGAACTATTAACCGTTTT+CGG - chr6.1:25454406-25454425 MS.gene054277:intron 30.0%
! TTCTTGAAATTTGGTTCGAT+TGG + chr6.1:25454538-25454557 None:intergenic 30.0%
!! GATGTTTTTGAAAAGGATAG+TGG - chr6.1:25452435-25452454 MS.gene054277:CDS 30.0%
!! GTTGATTTTTGGATTGAAAC+AGG - chr6.1:25453443-25453462 MS.gene054277:intron 30.0%
!! TCGAGTTGTTTCTTGAAATT+TGG + chr6.1:25454547-25454566 None:intergenic 30.0%
!! TTAATTGAGTTGACATCTCA+TGG - chr6.1:25453342-25453361 MS.gene054277:intron 30.0%
!!! GTTTTAGGTTTGATTTTCTC+CGG + chr6.1:25453784-25453803 None:intergenic 30.0%
AAATATGTTGCGACTACTCT+TGG + chr6.1:25453057-25453076 None:intergenic 35.0%
AAATCAAACCTAAAACCTCG+AGG - chr6.1:25453788-25453807 MS.gene054277:intron 35.0%
ATACCTGAGAAAAGCAATCA+TGG + chr6.1:25452491-25452510 None:intergenic 35.0%
ATTAACCTCTTGAATCACCA+GGG - chr6.1:25454649-25454668 MS.gene054277:intron 35.0%
CTACTCTCTTAGAAGAAACA+AGG + chr6.1:25452326-25452345 None:intergenic 35.0%
CTAGGATTGAAAGGATTGTA+AGG - chr6.1:25452400-25452419 MS.gene054277:CDS 35.0%
CTCCAAACTGTACAAATTCA+AGG + chr6.1:25454294-25454313 None:intergenic 35.0%
CTTACAATCCTTTCAATCCT+AGG + chr6.1:25452402-25452421 None:intergenic 35.0%
CTTGAATTTGTACAGTTTGG+AGG - chr6.1:25454292-25454311 MS.gene054277:intron 35.0%
! ATCCAAATTAATGGCGTTGA+GGG + chr6.1:25454593-25454612 None:intergenic 35.0%
! GATGCGTCTATTTTGTTGAA+TGG - chr6.1:25453471-25453490 MS.gene054277:intron 35.0%
! TAATAGGCTTAACTGGGTTT+TGG + chr6.1:25453156-25453175 None:intergenic 35.0%
! TGAAATTTGGTTCGATTGGT+GGG + chr6.1:25454534-25454553 None:intergenic 35.0%
! TTCACAATCTCCTTAGTCTT+AGG + chr6.1:25454709-25454728 None:intergenic 35.0%
! TTGAAATTTGGTTCGATTGG+TGG + chr6.1:25454535-25454554 None:intergenic 35.0%
! TTTCTTCTAAGAGAGTAGCA+AGG - chr6.1:25452328-25452347 MS.gene054277:CDS 35.0%
!! ATGATTCGGTTGAACATTGT+AGG + chr6.1:25454502-25454521 None:intergenic 35.0%
!! ATTTTCTCCGGTGTCAATTT+AGG + chr6.1:25453772-25453791 None:intergenic 35.0%
!! TTTCCATGATTGCTTTTCTC+AGG - chr6.1:25452485-25452504 MS.gene054277:CDS 35.0%
!!! AGTCAATTGGATGTTTTGAC+TGG - chr6.1:25454790-25454809 MS.gene054277:CDS 35.0%
!!! GATGTTTTGACTGGAAATCA+AGG - chr6.1:25454799-25454818 MS.gene054277:CDS 35.0%
AAAAAGAGTCGAAGTATGCC+AGG + chr6.1:25452468-25452487 None:intergenic 40.0%
AATTGAGGCATGTAAGAGCA+AGG + chr6.1:25453960-25453979 None:intergenic 40.0%
ACAGATGACCAAATAGGTTG+AGG + chr6.1:25454097-25454116 None:intergenic 40.0%
ACCAGATAGAGCAACTACAT+CGG + chr6.1:25454452-25454471 None:intergenic 40.0%
AGTTCATCTGTTCGTGCAAA+TGG + chr6.1:25454394-25454413 None:intergenic 40.0%
ATCCCTCAACGCCATTAATT+TGG - chr6.1:25454588-25454607 MS.gene054277:intron 40.0%
ATGATGCCAACTTCGCTTTA+AGG - chr6.1:25453523-25453542 MS.gene054277:CDS 40.0%
CATTAACCTCTTGAATCACC+AGG - chr6.1:25454648-25454667 MS.gene054277:intron 40.0%
CTAAACTTCAGTGTAAACGC+AGG - chr6.1:25454352-25454371 MS.gene054277:intron 40.0%
CTGCGTTTACACTGAAGTTT+AGG + chr6.1:25454354-25454373 None:intergenic 40.0%
GATCCAAATTAATGGCGTTG+AGG + chr6.1:25454594-25454613 None:intergenic 40.0%
GGATCTGTCTAATTTGAACC+CGG + chr6.1:25452714-25452733 None:intergenic 40.0%
GTCGCAACATATTTCACAAG+TGG - chr6.1:25453063-25453082 MS.gene054277:intron 40.0%
GTTTACATCGGATCAAGACT+TGG - chr6.1:25454675-25454694 MS.gene054277:CDS 40.0%
TAGATAGCCCTCAACCTATT+TGG - chr6.1:25454086-25454105 MS.gene054277:intron 40.0%
TAGCCTACCTAAATTGACAC+CGG - chr6.1:25453762-25453781 MS.gene054277:intron 40.0%
TGATGCCAACTTCGCTTTAA+GGG - chr6.1:25453524-25453543 MS.gene054277:CDS 40.0%
TGTCATGTCCTAGGATTGAA+AGG - chr6.1:25452391-25452410 MS.gene054277:CDS 40.0%
! CAGATGACCAAATAGGTTGA+GGG + chr6.1:25454096-25454115 None:intergenic 40.0%
! GCTTACGGATTATAACACGA+AGG + chr6.1:25453575-25453594 None:intergenic 40.0%
! TCTATTGGTTGTCATGTCCT+AGG - chr6.1:25452382-25452401 MS.gene054277:CDS 40.0%
!! CTTTCTGGTTAGAAGCAAAG+AGG + chr6.1:25454732-25454751 None:intergenic 40.0%
AAGAGGATCCATCGTTGTAC+CGG - chr6.1:25452692-25452711 MS.gene054277:CDS 45.0%
ACCGATGTAGTTGCTCTATC+TGG - chr6.1:25454448-25454467 MS.gene054277:intron 45.0%
ATTTGAACCCGGTACAACGA+TGG + chr6.1:25452703-25452722 None:intergenic 45.0%
CAACTCGTGGACATTGCTTA+CGG + chr6.1:25453590-25453609 None:intergenic 45.0%
CGAAGCTACATGTCCAAATG+AGG - chr6.1:25454564-25454583 MS.gene054277:intron 45.0%
CTGTTCGTGCAAATGGTACT+GGG + chr6.1:25454387-25454406 None:intergenic 45.0%
GGCAAGTCATCCTAAGACTA+AGG - chr6.1:25454696-25454715 MS.gene054277:CDS 45.0%
GTGGGTCGGAATCAATGATT+CGG + chr6.1:25454516-25454535 None:intergenic 45.0%
TCACCAGGGTGTGTTTACAT+CGG - chr6.1:25454663-25454682 MS.gene054277:intron 45.0%
TCTGTTCGTGCAAATGGTAC+TGG + chr6.1:25454388-25454407 None:intergenic 45.0%
! AGGCTGTCTTTTCTTCCCAA+TGG + chr6.1:25454334-25454353 None:intergenic 45.0%
! ATTTGGTTCGATTGGTGGGT+CGG + chr6.1:25454530-25454549 None:intergenic 45.0%
! CTATCTGGTGCTCACACTTT+TGG - chr6.1:25454463-25454482 MS.gene054277:intron 45.0%
! GAAATCTAAGGTGGCAACTG+TGG - chr6.1:25454858-25454877 MS.gene054277:CDS 45.0%
! TCTCCGGTGTCAATTTAGGT+AGG + chr6.1:25453768-25453787 None:intergenic 45.0%
!! TGTATGTGGTGGTATTGGCT+AGG + chr6.1:25453832-25453851 None:intergenic 45.0%
ACACACCCTGGTGATTCAAG+AGG + chr6.1:25454657-25454676 None:intergenic 50.0%
AGAGGATCCATCGTTGTACC+GGG - chr6.1:25452693-25452712 MS.gene054277:CDS 50.0%
CCAATGGCACGTCGAAATCT+GGG + chr6.1:25454318-25454337 None:intergenic 50.0%
CTCCTCCCTTAAAGCGAAGT+TGG + chr6.1:25453532-25453551 None:intergenic 50.0%
GATCCGATGTAAACACACCC+TGG + chr6.1:25454669-25454688 None:intergenic 50.0%
GCGTTGAGGGATTCCTCATT+TGG + chr6.1:25454580-25454599 None:intergenic 50.0%
! AAGGATAGTGGTCAAGCTCC+TGG - chr6.1:25452447-25452466 MS.gene054277:CDS 50.0%
! ATCTAAGGTGGCAACTGTGG+TGG - chr6.1:25454861-25454880 MS.gene054277:CDS 50.0%
! CCAGATTTCGACGTGCCATT+GGG - chr6.1:25454316-25454335 MS.gene054277:intron 50.0%
! GTGCTCTTCCTCGAGGTTTT+AGG + chr6.1:25453799-25453818 None:intergenic 50.0%
!! CAACTTCGCTTTAAGGGAGG+AGG - chr6.1:25453530-25453549 MS.gene054277:CDS 50.0%
!! GGTGGTATTGGCTAGGATCT+GGG + chr6.1:25453825-25453844 None:intergenic 50.0%
!! TGCCAACTTCGCTTTAAGGG+AGG - chr6.1:25453527-25453546 MS.gene054277:CDS 50.0%
!! TGGTGGTATTGGCTAGGATC+TGG + chr6.1:25453826-25453845 None:intergenic 50.0%
CCCAATGGCACGTCGAAATC+TGG + chr6.1:25454319-25454338 None:intergenic 55.0%
CCCAGATTTCGACGTGCCAT+TGG - chr6.1:25454315-25454334 MS.gene054277:intron 55.0%
TAGTCTAGTCCCCTCACAGC+AGG + chr6.1:25452357-25452376 None:intergenic 55.0%
! AACTGTGGTGGAAGAGGTGG+TGG - chr6.1:25454873-25454892 MS.gene054277:CDS 55.0%
AGCAAGGCCTCCTGCTGTGA+GGG - chr6.1:25452344-25452363 MS.gene054277:CDS 60.0%
CTTCGCGTGCGGCAATGACA+AGG + chr6.1:25453629-25453648 None:intergenic 60.0%
TAGCAAGGCCTCCTGCTGTG+AGG - chr6.1:25452343-25452362 MS.gene054277:CDS 60.0%
TCTAGTCCCCTCACAGCAGG+AGG + chr6.1:25452354-25452373 None:intergenic 60.0%
TCTGCGCACGAGACAACTCG+TGG + chr6.1:25453603-25453622 None:intergenic 60.0%
TTGGCGAACAGCTTCGCGTG+CGG + chr6.1:25453640-25453659 None:intergenic 60.0%
! GGCAACTGTGGTGGAAGAGG+TGG - chr6.1:25454870-25454889 MS.gene054277:CDS 60.0%
! GGTGGCAACTGTGGTGGAAG+AGG - chr6.1:25454867-25454886 MS.gene054277:CDS 60.0%
! TGGGAGTGTGCTCTTCCTCG+AGG + chr6.1:25453806-25453825 None:intergenic 60.0%
GCAAGGCCTCCTGCTGTGAG+GGG - chr6.1:25452345-25452364 MS.gene054277:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 25452264 25454915 25452264 ID=MS.gene054277
chr6.1 mRNA 25452264 25454915 25452264 ID=MS.gene054277.t1;Parent=MS.gene054277
chr6.1 exon 25454673 25454915 25454673 ID=MS.gene054277.t1.exon1;Parent=MS.gene054277.t1
chr6.1 CDS 25454673 25454915 25454673 ID=cds.MS.gene054277.t1;Parent=MS.gene054277.t1
chr6.1 exon 25453520 25453714 25453520 ID=MS.gene054277.t1.exon2;Parent=MS.gene054277.t1
chr6.1 CDS 25453520 25453714 25453520 ID=cds.MS.gene054277.t1;Parent=MS.gene054277.t1
chr6.1 exon 25452264 25452872 25452264 ID=MS.gene054277.t1.exon3;Parent=MS.gene054277.t1
chr6.1 CDS 25452264 25452872 25452264 ID=cds.MS.gene054277.t1;Parent=MS.gene054277.t1
Gene Sequence

>MS.gene054277

ATGGCTATGGTTAGTGCAAGTAGATCTCTTTTTATTTCTTTTCTATTAGCTTCTCTAATCCTTGTTTCTTCTAAGAGAGTAGCAAGGCCTCCTGCTGTGAGGGGACTAGACTATGATTTCTATTGGTTGTCATGTCCTAGGATTGAAAGGATTGTAAGGAAACATCTTGAAGATGTTTTTGAAAAGGATAGTGGTCAAGCTCCTGGCATACTTCGACTCTTTTTCCATGATTGCTTTTCTCAGGTATGACTTAAGATTGTTCTCAAAACCCTACTTTCTTTTTTATGGATGTGTCTATTATGAACCTCTAAAATATGATTCAATAATTGATCTTTACCATTTTCAATAAGTAATGAATTTTATAATAATAATGATTTTAATAGTAACTGGAGTATAAAAATACTATTTTACTAAAACTTATTAGAAGTAAGAGGATCCATCGTTGTACCGGGTTCAAATTAGACAGATCCCATTTTTGTTAATTGAATTTAACAAAACAATCAAACCATATATAAGTGCTAAGATTGAAAGGATACATAAGTTAAGGGTAGTGTTAATTTGCGCGCATATGTTAAGAAATCCAAAAGAATAAATATTCTCTAAAATTTTGTGCATTTAATTTATTATAAAGTTAAAGATTACATGTAATGCACATTCCAATAAACTATTTCTATTTTTTATTCATTAACTTGTGTTTTAAGGACACAAGTTAGCATTTCTTATAAGTTAATAAACAAAAGGTGCCAAAACATATCAGCCATATAAACCCAACACATAAGAAAAACAAAATCCAAGAGTAGTCGCAACATATTTCACAAGTGGTAAAAAAATGACAAAAATTCGATTTTTGAATCGAGGATTAAAAGTTAATTTTGAACAAAAAGGAGATCCAAAACCCAGTTAAGCCTATTAATAATAAAGAACAACAATAATCTTTTATTAAAAAGATTAATTATTTGCCTTTAATTTTTTTTTTCTTCAGAGTTCATACTATATGTACCCATTTATTTCAAAGCATATTTTTGTGTGCGCAATTGTTTCACATGAGATTTATATTTTTTCTTGAAGTCAAACTTTTTTAATTGAGTTGACATCTCATGGTCAATCCTACACGATCTTTTTACTTACATGTAATTGAAAATATTTAATGTTGATTTGTGCCATTTAAAAAGATTAAATGTTGATTTTTGGATTGAAACAGGGATGCGATGCGTCTATTTTGTTGAATGGCGTTAATGGAGAAGATGACGAAAAACAACATGATGCCAACTTCGCTTTAAGGGAGGAGGCTCTTCAGACTATTGAGAACCTTCGTGTTATAATCCGTAAGCAATGTCCACGAGTTGTCTCGTGCGCAGATATCCTTGTCATTGCCGCACGCGAAGCTGTTCGCCAAGTAATTTCTATTTATGTGTTCTTTCTCTTTTATTTCTTCTTTTTGGTTAATTTAAAATAAAATAGATCTCATACATATGACAATTTTTTGAAGAAGTTAAATTAGCCTACCTAAATTGACACCGGAGAAAATCAAACCTAAAACCTCGAGGAAGAGCACACTCCCAGATCCTAGCCAATACCACCACATACATATATGACAATTATAATTGGTTGAAACTATAAAAACTGTATTTCTTTGAGAGTGTATACAAATTAATTCGTCTACATATTAATTTAAAAGACATTGTAATTTGAACCTTGCTCTTACATGCCTCAATTATTTTAATCGCAAAGACACTAAACAATTTCACGTGAGATAAAATTATAGTTTTTTTTTTTTTTTTTTTTTTAAAAAACGACTAATGTTACTATATTATGTTACGAGTAGATAGCCCTCAACCTATTTGGTCATCTGTGTAAATTATTTACACTGATAGGGTATGTCTTATTTTCACTTTACACGGAGTTAATTGAAAGATCCTTAACTAAAACAATACTATGTTGAACCTAAAAATGCAACTAAGCATATATATTTAGAACATCATTCATACTTTTTTGGCAACATTTAACATTACGTCACTTAATTGCTTCCTTGAATTTGTACAGTTTGGAGGCCCAGATTTCGACGTGCCATTGGGAAGAAAAGACAGCCTAAACTTCAGTGTAAACGCAGGAGATAATCTCCCAGTACCATTTGCACGAACAGATGAACTATTAACCGTTTTCGGATCAAAAAAATTTGATGCAACCGATGTAGTTGCTCTATCTGGTGCTCACACTTTTGGTCAAGCTCATTGTCCTACAATGTTCAACCGAATCATTGATTCCGACCCACCAATCGAACCAAATTTCAAGAAACAACTCGAAGCTACATGTCCAAATGAGGAATCCCTCAACGCCATTAATTTGGATCTTCGAACACCAAACACATTCGATAATATGTACTACATTAACCTCTTGAATCACCAGGGTGTGTTTACATCGGATCAAGACTTGGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCTCTTTGCTTCTAACCAGAAAGAGTATTTTAACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACTGGAAATCAAGGAGAAATTCGTAAGTCATGTTTTGCTCCAAATAATAGGAAATCTAAGGTGGCAACTGTGGTGGAAGAGGTGGTGGAAATTGCAGCAAACATGTAG

Protein sequence

>MS.gene054277.t1

MAMVSASRSLFISFLLASLILVSSKRVARPPAVRGLDYDFYWLSCPRIERIVRKHLEDVFEKDSGQAPGILRLFFHDCFSQGCDASILLNGVNGEDDEKQHDANFALREEALQTIENLRVIIRKQCPRVVSCADILVIAAREAVRQFGGPDFDVPLGRKDSLNFSVNAGDNLPVPFARTDELLTVFGSKKFDATDVVALSGAHTFGQAHCPTMFNRIIDSDPPIEPNFKKQLEATCPNEESLNAINLDLRTPNTFDNMYYINLLNHQGVFTSDQDLASHPKTKEIVNLFASNQKEYFNKFANAFVKVSQLDVLTGNQGEIRKSCFAPNNRKSKVATVVEEVVEIAANM