Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80767.t1 | KEH27853.1 | 96.2 | 210 | 8 | 0 | 132 | 341 | 7 | 216 | 7.70E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80767.t1 | P9WNH2 | 31.7 | 120 | 73 | 4 | 156 | 270 | 38 | 153 | 9.5e-06 | 52.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80767.t1 | A0A072UFJ6 | 96.2 | 210 | 8 | 0 | 132 | 341 | 7 | 216 | 5.5e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene80767 | 0.802292 | 6.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80767.t1 | MTR_5g044540 | 95.735 | 211 | 9 | 0 | 132 | 342 | 7 | 217 | 2.90e-148 | 420 |
| MS.gene80767.t1 | MTR_5g044540 | 95.735 | 211 | 9 | 0 | 132 | 342 | 69 | 279 | 5.96e-148 | 422 |
| MS.gene80767.t1 | MTR_5g044540 | 95.714 | 210 | 9 | 0 | 133 | 342 | 7 | 216 | 1.21e-147 | 419 |
| MS.gene80767.t1 | MTR_5g044540 | 96.500 | 200 | 7 | 0 | 143 | 342 | 1 | 200 | 2.23e-141 | 402 |
| MS.gene80767.t1 | MTR_4g083080 | 82.212 | 208 | 37 | 0 | 132 | 339 | 50 | 257 | 4.06e-127 | 368 |
| MS.gene80767.t1 | MTR_8g077185 | 34.074 | 135 | 86 | 3 | 150 | 284 | 94 | 225 | 1.57e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80767.t1 | AT1G13820 | 70.616 | 211 | 62 | 0 | 132 | 342 | 59 | 269 | 2.54e-112 | 331 |
| MS.gene80767.t1 | AT5G39220 | 61.611 | 211 | 80 | 1 | 132 | 341 | 57 | 267 | 3.29e-95 | 287 |
| MS.gene80767.t1 | AT5G39220 | 58.768 | 211 | 78 | 2 | 132 | 341 | 57 | 259 | 1.13e-86 | 265 |
| MS.gene80767.t1 | AT4G36530 | 34.259 | 108 | 69 | 2 | 150 | 257 | 37 | 142 | 1.79e-12 | 67.8 |
| MS.gene80767.t1 | AT4G36530 | 34.259 | 108 | 69 | 2 | 150 | 257 | 94 | 199 | 2.24e-12 | 68.2 |
Find 103 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGGGTTTCTCTGATTT+AGG | 0.215057 | 4.4:+80307642 | MS.gene80767:CDS |
| GCAGTTGGTGGTAGGGGCTT+TGG | 0.266577 | 4.4:+80306731 | MS.gene80767:intron |
| TGGCTGTTCGGTGGGCTGTT+AGG | 0.281867 | 4.4:+80306792 | MS.gene80767:CDS |
| GGGGTGGCAGTTGGTGGTAG+GGG | 0.289366 | 4.4:+80306725 | MS.gene80767:intron |
| TGGATGGCACATACAGCTTC+TGG | 0.302445 | 4.4:-80308226 | None:intergenic |
| TTGAATATACCTTTCTTATG+AGG | 0.323576 | 4.4:-80308900 | None:intergenic |
| GGTTATCGACATACTTGGTT+GGG | 0.334100 | 4.4:+80307626 | MS.gene80767:CDS |
| ACCACCAGCACAACCACGCC+AGG | 0.334924 | 4.4:-80306966 | None:intergenic |
| CATCAGAAGGCCAATGATAT+TGG | 0.348222 | 4.4:+80308153 | MS.gene80767:CDS |
| AGTGGAGTTTGTGCTGTCAT+AGG | 0.369011 | 4.4:+80306766 | MS.gene80767:CDS |
| CCAACATAGGCTACCGATCT+AGG | 0.370224 | 4.4:-80308422 | None:intergenic |
| GTGTTATTTAGTTCTGCTTC+AGG | 0.371611 | 4.4:+80306998 | MS.gene80767:CDS |
| GTTTGTGCTGTCATAGGTTC+TGG | 0.374090 | 4.4:+80306772 | MS.gene80767:CDS |
| CTGTGTTCCTTGTGTGGGAA+GGG | 0.377187 | 4.4:+80306862 | MS.gene80767:CDS |
| AAAACGCAATCACTTCTATC+AGG | 0.408162 | 4.4:+80307791 | MS.gene80767:CDS |
| TATCCATTGTTGGAAGAGTC+TGG | 0.412505 | 4.4:+80307591 | MS.gene80767:CDS |
| TATTCAGTTCATGTTTAGAA+TGG | 0.414992 | 4.4:+80307559 | MS.gene80767:intron |
| TGCGAGCCTGTATACTGTCC+TGG | 0.424065 | 4.4:+80306948 | MS.gene80767:CDS |
| CTGTCCTGGCGTGGTTGTGC+TGG | 0.424222 | 4.4:+80306962 | MS.gene80767:CDS |
| GGTCTGTTTGCGGTGGCACT+TGG | 0.424956 | 4.4:+80306919 | MS.gene80767:CDS |
| CAATTGTCTCTTTAGCTAGC+AGG | 0.425723 | 4.4:+80309117 | MS.gene80767:intron |
| TTGATAGTAGCTTGTTTAGT+GGG | 0.434223 | 4.4:+80306898 | MS.gene80767:CDS |
| TCTGTGTTCCTTGTGTGGGA+AGG | 0.437595 | 4.4:+80306861 | MS.gene80767:CDS |
| CTAGATCGGTAGCCTATGTT+GGG | 0.438798 | 4.4:+80308423 | MS.gene80767:CDS |
| TTTAGTGAGTTGGTTCTTGG+TGG | 0.455739 | 4.4:+80307041 | MS.gene80767:CDS |
| AAACCGTGTAGAAGAACAAT+TGG | 0.456619 | 4.4:-80307452 | None:intergenic |
| CCTAGATCGGTAGCCTATGT+TGG | 0.461188 | 4.4:+80308422 | MS.gene80767:CDS |
| GTTGATAGTAGCTTGTTTAG+TGG | 0.462171 | 4.4:+80306897 | MS.gene80767:CDS |
| AGTGTATATACAGAGGGAAC+TGG | 0.463727 | 4.4:+80308383 | MS.gene80767:CDS |
| CTTACAGTTTCTACAAACAT+TGG | 0.465943 | 4.4:-80305955 | None:intergenic |
| CAGCACAAACTCCACTGAAC+CGG | 0.468857 | 4.4:-80306759 | None:intergenic |
| TGTGTTCCTTGTGTGGGAAG+GGG | 0.473938 | 4.4:+80306863 | MS.gene80767:CDS |
| GGGTTATCGACATACTTGGT+TGG | 0.476497 | 4.4:+80307625 | MS.gene80767:CDS |
| TCCTTACGCACCATCCTTGA+CGG | 0.477641 | 4.4:+80308594 | MS.gene80767:CDS |
| GCTTGCATTGCTTATTGCCA+TGG | 0.478104 | 4.4:+80308824 | MS.gene80767:CDS |
| CTTTGGTTCTGCCGGTTCAG+TGG | 0.479446 | 4.4:+80306748 | MS.gene80767:CDS |
| GAGATACAGATATCCATTGT+TGG | 0.483959 | 4.4:+80307581 | MS.gene80767:CDS |
| TGAATATACCTTTCTTATGA+GGG | 0.484063 | 4.4:-80308899 | None:intergenic |
| ACTTGGGTTATCGACATACT+TGG | 0.487875 | 4.4:+80307621 | MS.gene80767:CDS |
| TGTCATAGGTTCTGGCTGTT+CGG | 0.490611 | 4.4:+80306780 | MS.gene80767:CDS |
| TCCTGGCGTGGTTGTGCTGG+TGG | 0.493411 | 4.4:+80306965 | MS.gene80767:CDS |
| ACCACGCCAGGACAGTATAC+AGG | 0.493812 | 4.4:-80306954 | None:intergenic |
| TTGTTTAGTGGGTCTGTTTG+CGG | 0.494259 | 4.4:+80306909 | MS.gene80767:CDS |
| CTTGGTCCAACCAATATCAT+TGG | 0.498210 | 4.4:-80308163 | None:intergenic |
| TATCATTGGCCTTCTGATGT+AGG | 0.502689 | 4.4:-80308149 | None:intergenic |
| GTTAGTGAAGGTCAAATAGT+TGG | 0.503815 | 4.4:-80308568 | None:intergenic |
| GGAATACAACTTATTGGTAG+AGG | 0.504997 | 4.4:+80309155 | MS.gene80767:CDS |
| GTGTTCCTTGTGTGGGAAGG+GGG | 0.505361 | 4.4:+80306864 | MS.gene80767:CDS |
| GGTAGGGGCTTTGGTTCTGC+CGG | 0.510134 | 4.4:+80306740 | MS.gene80767:CDS |
| CATAGGTTCTGGCTGTTCGG+TGG | 0.512728 | 4.4:+80306783 | MS.gene80767:CDS |
| CAGTGTCTGTGTTCCTTGTG+TGG | 0.516268 | 4.4:+80306856 | MS.gene80767:CDS |
| TTGTGCTGGTGGTTCTCTGT+GGG | 0.516634 | 4.4:+80306976 | MS.gene80767:CDS |
| GCATTGCTTATTGCCATGGT+GGG | 0.516840 | 4.4:+80308828 | MS.gene80767:CDS |
| TGGGCTGTTAGGCATTGTCC+AGG | 0.522559 | 4.4:+80306803 | MS.gene80767:CDS |
| AATTGTCTCTTTAGCTAGCA+GGG | 0.522621 | 4.4:+80309118 | MS.gene80767:intron |
| TGAGTTGGTTCTTGGTGGAG+AGG | 0.529772 | 4.4:+80307046 | MS.gene80767:CDS |
| CTTAGCAACCTTACCTAGAT+CGG | 0.530689 | 4.4:+80308409 | MS.gene80767:CDS |
| ATAGGTTCTGGCTGTTCGGT+GGG | 0.532278 | 4.4:+80306784 | MS.gene80767:CDS |
| ACAACAACAAAACTACTGCC+TGG | 0.534988 | 4.4:-80306821 | None:intergenic |
| CCCGTCAAGGATGGTGCGTA+AGG | 0.540263 | 4.4:-80308595 | None:intergenic |
| AATTGCACCCCTCATAAGAA+AGG | 0.542107 | 4.4:+80308891 | MS.gene80767:CDS |
| ATAATTGACAGCAAAGTCAA+TGG | 0.542640 | 4.4:-80308203 | None:intergenic |
| CTTGACACAACTGCTCATGA+TGG | 0.544043 | 4.4:-80307405 | None:intergenic |
| TTCTTCTACACGGTTTCGAT+AGG | 0.544486 | 4.4:+80307459 | MS.gene80767:CDS |
| TTTGGAAGTCCTACATCAGA+AGG | 0.545172 | 4.4:+80308140 | MS.gene80767:CDS |
| GTTATCGACATACTTGGTTG+GGG | 0.547806 | 4.4:+80307627 | MS.gene80767:CDS |
| TAGTTGGCATATAAGCGTAA+TGG | 0.554089 | 4.4:-80308552 | None:intergenic |
| GAATACAACTTATTGGTAGA+GGG | 0.554646 | 4.4:+80309156 | MS.gene80767:CDS |
| AGAAGGCCAATGATATTGGT+TGG | 0.555544 | 4.4:+80308157 | MS.gene80767:CDS |
| ATGTACTTAACCTGCATAGG+AGG | 0.555688 | 4.4:-80307110 | None:intergenic |
| CCTCCAATTGTTCTTCTACA+CGG | 0.558051 | 4.4:+80307449 | MS.gene80767:CDS |
| CAAGGCACTGGTGCAGAACA+AGG | 0.558230 | 4.4:+80307424 | MS.gene80767:CDS |
| GAGCAGTTGTGTCAAGGCAC+TGG | 0.559691 | 4.4:+80307412 | MS.gene80767:CDS |
| GAGAGGTGTTCCTTGCGTCA+AGG | 0.560252 | 4.4:+80307063 | MS.gene80767:CDS |
| TTGACACAACTGCTCATGAT+GGG | 0.564698 | 4.4:-80307404 | None:intergenic |
| CCGTGTAGAAGAACAATTGG+AGG | 0.565041 | 4.4:-80307449 | None:intergenic |
| CACATTAGTCCCGTCAAGGA+TGG | 0.568377 | 4.4:-80308604 | None:intergenic |
| GCAACAGCAGAACCGAGGCT+TGG | 0.569874 | 4.4:-80308181 | None:intergenic |
| ATATTGGTTGGACCAAGCCT+CGG | 0.580618 | 4.4:+80308169 | MS.gene80767:CDS |
| TGCATTGCTTATTGCCATGG+TGG | 0.580841 | 4.4:+80308827 | MS.gene80767:CDS |
| AGTGTCTGTGTTCCTTGTGT+GGG | 0.580983 | 4.4:+80306857 | MS.gene80767:CDS |
| AAACCAGACTCTTCCAACAA+TGG | 0.584131 | 4.4:-80307594 | None:intergenic |
| CCTTACGCACCATCCTTGAC+GGG | 0.586415 | 4.4:+80308595 | MS.gene80767:CDS |
| CATCATGAGCAGTTGTGTCA+AGG | 0.588221 | 4.4:+80307406 | MS.gene80767:CDS |
| ATAGGCTACCGATCTAGGTA+AGG | 0.590029 | 4.4:-80308417 | None:intergenic |
| GAATATACCTTTCTTATGAG+GGG | 0.592750 | 4.4:-80308898 | None:intergenic |
| ATGGAGAGGGCCTTGACGCA+AGG | 0.599167 | 4.4:-80307073 | None:intergenic |
| GTTGTGCTGGTGGTTCTCTG+TGG | 0.602537 | 4.4:+80306975 | MS.gene80767:CDS |
| GGAGATATTTACCCCAACAT+AGG | 0.603722 | 4.4:-80308435 | None:intergenic |
| GCCTGTATACTGTCCTGGCG+TGG | 0.605586 | 4.4:+80306953 | MS.gene80767:CDS |
| AACTCACATTAGTCCCGTCA+AGG | 0.617765 | 4.4:-80308608 | None:intergenic |
| GACGCTAGTGTATATACAGA+GGG | 0.618405 | 4.4:+80308377 | MS.gene80767:CDS |
| AAGATGTACTTAACCTGCAT+AGG | 0.618540 | 4.4:-80307113 | None:intergenic |
| GCGTAAGGACATGTTAGTGA+AGG | 0.631032 | 4.4:-80308580 | None:intergenic |
| AATACAACTTATTGGTAGAG+GGG | 0.641649 | 4.4:+80309157 | MS.gene80767:CDS |
| TTTAGTGGGTCTGTTTGCGG+TGG | 0.666013 | 4.4:+80306912 | MS.gene80767:CDS |
| AAATCTTCCTCCTTGTGACG+TGG | 0.670338 | 4.4:+80307764 | MS.gene80767:CDS |
| TGACGCTAGTGTATATACAG+AGG | 0.685376 | 4.4:+80308376 | MS.gene80767:CDS |
| TAGATCGGTAGCCTATGTTG+GGG | 0.690553 | 4.4:+80308424 | MS.gene80767:CDS |
| CAATGGCAACAGCAGAACCG+AGG | 0.691199 | 4.4:-80308186 | None:intergenic |
| ATGGCAATAAGCAATGCAAG+CGG | 0.692723 | 4.4:-80308822 | None:intergenic |
| TTTGATACCACGTCACAAGG+AGG | 0.713535 | 4.4:-80307771 | None:intergenic |
| ACAGTAGCATCATCCCACCA+TGG | 0.730059 | 4.4:-80308841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGTAAATTTTTTAGAA+TGG | + | chr4.4:80306354-80306373 | MS.gene80767:intron | 10.0% |
| !! | AAAAATGTTGAAACATATAT+TGG | - | chr4.4:80308779-80308798 | None:intergenic | 15.0% |
| !! | AAAATGTTGAAACATATATT+GGG | - | chr4.4:80308778-80308797 | None:intergenic | 15.0% |
| !! | AATAAGACAATATAAAATTC+AGG | - | chr4.4:80307540-80307559 | None:intergenic | 15.0% |
| !!! | AAAAAAAATTAGGGTTTTTA+TGG | - | chr4.4:80306067-80306086 | None:intergenic | 15.0% |
| !!! | AAAAAAATTAGGGTTTTTAT+GGG | - | chr4.4:80306066-80306085 | None:intergenic | 15.0% |
| !!! | ATTAACATGATATTTGTTTT+TGG | + | chr4.4:80306539-80306558 | MS.gene80767:intron | 15.0% |
| !!! | TAACAAAATTACTATTTCTT+TGG | + | chr4.4:80307185-80307204 | MS.gene80767:intron | 15.0% |
| !!! | TATGTTAATTTTATGGATTT+TGG | + | chr4.4:80308928-80308947 | MS.gene80767:intron | 15.0% |
| !!! | TTAACATGATATTTGTTTTT+GGG | + | chr4.4:80306540-80306559 | MS.gene80767:intron | 15.0% |
| !! | ATATTAAGACGTGAAATTAT+TGG | - | chr4.4:80308249-80308268 | None:intergenic | 20.0% |
| !! | ATTAAGAGACCAATATAAAT+TGG | - | chr4.4:80306462-80306481 | None:intergenic | 20.0% |
| !! | ATTCATACTTTCTTTAACAT+TGG | + | chr4.4:80306417-80306436 | MS.gene80767:intron | 20.0% |
| !! | CTTAATTCAAGATAATTGAA+TGG | + | chr4.4:80307924-80307943 | MS.gene80767:intron | 20.0% |
| !! | TAAACTATCATCTGAATAAT+TGG | + | chr4.4:80308023-80308042 | MS.gene80767:intron | 20.0% |
| !! | TATCGAATCAGTTAAATTAT+TGG | + | chr4.4:80307986-80308005 | MS.gene80767:intron | 20.0% |
| !!! | AAATTTACAAATTTTACTCC+TGG | - | chr4.4:80306347-80306366 | None:intergenic | 20.0% |
| !!! | ATTGCTATTCGAAATAAAAT+TGG | - | chr4.4:80307260-80307279 | None:intergenic | 20.0% |
| !!! | CACATTTTTATCTTCATATT+GGG | + | chr4.4:80308660-80308679 | MS.gene80767:intron | 20.0% |
| !!! | GAACTATAAAATTTTGTTGT+TGG | + | chr4.4:80307140-80307159 | MS.gene80767:intron | 20.0% |
| !!! | GTATTTTTCTATAACAGTTT+TGG | + | chr4.4:80308122-80308141 | MS.gene80767:intron | 20.0% |
| !!! | TAACATGATATTTGTTTTTG+GGG | + | chr4.4:80306541-80306560 | MS.gene80767:intron | 20.0% |
| !!! | TATAAAATTTTGTTGTTGGT+TGG | + | chr4.4:80307144-80307163 | MS.gene80767:intron | 20.0% |
| !!! | TCACATTTTTATCTTCATAT+TGG | + | chr4.4:80308659-80308678 | MS.gene80767:intron | 20.0% |
| !!! | TTACTATTTCTTTGGATTAA+TGG | + | chr4.4:80307193-80307212 | MS.gene80767:intron | 20.0% |
| !!! | TTTTCATATATCCTCTTTAT+AGG | + | chr4.4:80308795-80308814 | MS.gene80767:intron | 20.0% |
| ! | AATACATCTTGTTGCAAAAT+TGG | - | chr4.4:80309061-80309080 | None:intergenic | 25.0% |
| ! | TATTCAGTTCATGTTTAGAA+TGG | + | chr4.4:80307559-80307578 | MS.gene80767:intron | 25.0% |
| ! | TCTTAATATTGTAACCATGA+GGG | + | chr4.4:80306475-80306494 | MS.gene80767:intron | 25.0% |
| ! | TGAATATACCTTTCTTATGA+GGG | - | chr4.4:80308902-80308921 | None:intergenic | 25.0% |
| ! | TTGAATATACCTTTCTTATG+AGG | - | chr4.4:80308903-80308922 | None:intergenic | 25.0% |
| ! | TTGTTTCGTATGATATGATT+AGG | + | chr4.4:80307364-80307383 | MS.gene80767:intron | 25.0% |
| !! | TATTTGCAATTCATCTTTTC+AGG | + | chr4.4:80308334-80308353 | MS.gene80767:intron | 25.0% |
| !!! | AATTTTTTGTGTGTGTATCA+AGG | + | chr4.4:80306162-80306181 | MS.gene80767:intron | 25.0% |
| !!! | CTTAATGTTTTAGTAAGATG+CGG | - | chr4.4:80308459-80308478 | None:intergenic | 25.0% |
| !!! | GAATGTTTGATTTGTGTTTA+TGG | + | chr4.4:80307290-80307309 | MS.gene80767:intron | 25.0% |
| !!! | TGATATATTTGGCTTTTAAC+TGG | + | chr4.4:80306309-80306328 | MS.gene80767:intron | 25.0% |
| !!! | TTTTGAGGAATACAACTTAT+TGG | + | chr4.4:80309149-80309168 | MS.gene80767:CDS | 25.0% |
| AAAAAAAGCCTTACAGAGAA+AGG | - | chr4.4:80307709-80307728 | None:intergenic | 30.0% | |
| AAAAAAGCCTTACAGAGAAA+GGG | - | chr4.4:80307708-80307727 | None:intergenic | 30.0% | |
| AACAGCAAAAATTAGTTGTG+AGG | - | chr4.4:80307330-80307349 | None:intergenic | 30.0% | |
| AATACAACTTATTGGTAGAG+GGG | + | chr4.4:80309157-80309176 | MS.gene80767:CDS | 30.0% | |
| AATGTATTCATTTGTCTCGA+AGG | - | chr4.4:80308963-80308982 | None:intergenic | 30.0% | |
| AATTCAATGCTTACACTGTT+TGG | + | chr4.4:80308502-80308521 | MS.gene80767:intron | 30.0% | |
| AATTTCTGTTGCTCGAAAAA+CGG | + | chr4.4:80307226-80307245 | MS.gene80767:intron | 30.0% | |
| ACGAGAAGGGAAAAAAAATT+AGG | - | chr4.4:80306077-80306096 | None:intergenic | 30.0% | |
| AGACCAATATAAATTGGAAC+TGG | - | chr4.4:80306456-80306475 | None:intergenic | 30.0% | |
| ATAATTGACAGCAAAGTCAA+TGG | - | chr4.4:80308206-80308225 | None:intergenic | 30.0% | |
| ATACCCAACCAAAGAAAAAT+TGG | - | chr4.4:80306102-80306121 | None:intergenic | 30.0% | |
| ATGCCAGTTCCAATTTATAT+TGG | + | chr4.4:80306450-80306469 | MS.gene80767:intron | 30.0% | |
| ATGTATTCATTTGTCTCGAA+GGG | - | chr4.4:80308962-80308981 | None:intergenic | 30.0% | |
| CATATATCCTCTTTATAGGT+GGG | + | chr4.4:80308799-80308818 | MS.gene80767:intron | 30.0% | |
| CGAGAAGGGAAAAAAAATTA+GGG | - | chr4.4:80306076-80306095 | None:intergenic | 30.0% | |
| CTATCCTTAAAATGACTACT+AGG | + | chr4.4:80308634-80308653 | MS.gene80767:intron | 30.0% | |
| CTCTTAATATTGTAACCATG+AGG | + | chr4.4:80306474-80306493 | MS.gene80767:intron | 30.0% | |
| CTTAATATTGTAACCATGAG+GGG | + | chr4.4:80306476-80306495 | MS.gene80767:intron | 30.0% | |
| GAATACAACTTATTGGTAGA+GGG | + | chr4.4:80309156-80309175 | MS.gene80767:CDS | 30.0% | |
| GAATATACCTTTCTTATGAG+GGG | - | chr4.4:80308901-80308920 | None:intergenic | 30.0% | |
| GCCAAATATATCACACATTT+AGG | - | chr4.4:80306302-80306321 | None:intergenic | 30.0% | |
| GCCTAAATGTGTGATATATT+TGG | + | chr4.4:80306298-80306317 | MS.gene80767:intron | 30.0% | |
| TAAGACGTGAAATTATTGGA+TGG | - | chr4.4:80308245-80308264 | None:intergenic | 30.0% | |
| TACCCAACCAAAGAAAAATT+GGG | - | chr4.4:80306101-80306120 | None:intergenic | 30.0% | |
| TATCTTCATATTGGGACATT+AGG | + | chr4.4:80308668-80308687 | MS.gene80767:intron | 30.0% | |
| TCATATATCCTCTTTATAGG+TGG | + | chr4.4:80308798-80308817 | MS.gene80767:intron | 30.0% | |
| TGTTGAAAGAAATTGACCAT+CGG | - | chr4.4:80308058-80308077 | None:intergenic | 30.0% | |
| TTATAGGTTTGATCAACACT+CGG | - | chr4.4:80307858-80307877 | None:intergenic | 30.0% | |
| ! | AAAAAAGAGTACAAATGGAG+AGG | - | chr4.4:80307090-80307109 | None:intergenic | 30.0% |
| ! | AAAAAGAGTACAAATGGAGA+GGG | - | chr4.4:80307089-80307108 | None:intergenic | 30.0% |
| ! | TATTAATTTTGCGTGTGTCA+AGG | + | chr4.4:80306119-80306138 | MS.gene80767:intron | 30.0% |
| ! | TATTGGGTTGTTAAAACTCT+CGG | - | chr4.4:80308762-80308781 | None:intergenic | 30.0% |
| !! | AACAAATCAAAGTGTTGTCA+TGG | + | chr4.4:80306579-80306598 | MS.gene80767:intron | 30.0% |
| !! | ATGTATTAACTTGCTTTGAC+TGG | + | chr4.4:80309074-80309093 | MS.gene80767:intron | 30.0% |
| !! | CTAGTAGTCATTTTAAGGAT+AGG | - | chr4.4:80308636-80308655 | None:intergenic | 30.0% |
| !! | TTGATAGTAGCTTGTTTAGT+GGG | + | chr4.4:80306898-80306917 | MS.gene80767:CDS | 30.0% |
| !!! | AAAATTTTGTTGTTGGTTGG+TGG | + | chr4.4:80307147-80307166 | MS.gene80767:intron | 30.0% |
| !!! | ACTGTTGATTTTATGACTAG+TGG | + | chr4.4:80308859-80308878 | MS.gene80767:CDS | 30.0% |
| !!! | GGTTGATTCGGTTTTATTTT+TGG | + | chr4.4:80306681-80306700 | MS.gene80767:intron | 30.0% |
| !!! | TGATTCGGTTTTATTTTTGG+TGG | + | chr4.4:80306684-80306703 | MS.gene80767:intron | 30.0% |
| !!! | TTTTTTAGTGAGTTGGTTCT+TGG | + | chr4.4:80307038-80307057 | MS.gene80767:CDS | 30.0% |
| AAAAAGCCTTACAGAGAAAG+GGG | - | chr4.4:80307707-80307726 | None:intergenic | 35.0% | |
| AAAACGCAATCACTTCTATC+AGG | + | chr4.4:80307791-80307810 | MS.gene80767:CDS | 35.0% | |
| AAACCGTGTAGAAGAACAAT+TGG | - | chr4.4:80307455-80307474 | None:intergenic | 35.0% | |
| AAGATGTACTTAACCTGCAT+AGG | - | chr4.4:80307116-80307135 | None:intergenic | 35.0% | |
| AATTGTCTCTTTAGCTAGCA+GGG | + | chr4.4:80309118-80309137 | MS.gene80767:intron | 35.0% | |
| ACCCAACCAAAGAAAAATTG+GGG | - | chr4.4:80306100-80306119 | None:intergenic | 35.0% | |
| ATGATCAAGAACTTTGTGCT+TGG | + | chr4.4:80308721-80308740 | MS.gene80767:intron | 35.0% | |
| ATGTGATGCCAAGTTATCAA+AGG | - | chr4.4:80308703-80308722 | None:intergenic | 35.0% | |
| CAACGTGTTTATTCTACGAA+TGG | + | chr4.4:80306630-80306649 | MS.gene80767:intron | 35.0% | |
| CATTTAGGCATGACTGTAAA+TGG | - | chr4.4:80306287-80306306 | None:intergenic | 35.0% | |
| GAGATACAGATATCCATTGT+TGG | + | chr4.4:80307581-80307600 | MS.gene80767:CDS | 35.0% | |
| GGAATACAACTTATTGGTAG+AGG | + | chr4.4:80309155-80309174 | MS.gene80767:CDS | 35.0% | |
| GTTAGTGAAGGTCAAATAGT+TGG | - | chr4.4:80308571-80308590 | None:intergenic | 35.0% | |
| TAGATATAATAAGCCCCTCA+TGG | - | chr4.4:80306492-80306511 | None:intergenic | 35.0% | |
| TAGTTGGCATATAAGCGTAA+TGG | - | chr4.4:80308555-80308574 | None:intergenic | 35.0% | |
| TATAGGTTTGATCAACACTC+GGG | - | chr4.4:80307857-80307876 | None:intergenic | 35.0% | |
| TGTATTCATTTGTCTCGAAG+GGG | - | chr4.4:80308961-80308980 | None:intergenic | 35.0% | |
| TGTCTGTGTCAGTACTTTAT+AGG | - | chr4.4:80307874-80307893 | None:intergenic | 35.0% | |
| TGTGATGCCAAGTTATCAAA+GGG | - | chr4.4:80308702-80308721 | None:intergenic | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | + | chr4.4:80307953-80307972 | MS.gene80767:intron | 35.0% | |
| ! | ACATGTTCCCTTTGATAACT+TGG | + | chr4.4:80308692-80308711 | MS.gene80767:intron | 35.0% |
| ! | GGAGGAAAAAAGAGTACAAA+TGG | - | chr4.4:80307095-80307114 | None:intergenic | 35.0% |
| ! | TCCCCAATTTTTCTTTGGTT+GGG | + | chr4.4:80306096-80306115 | MS.gene80767:intron | 35.0% |
| !! | AACTGGTTTGTTAAGATTCC+AGG | + | chr4.4:80306326-80306345 | MS.gene80767:intron | 35.0% |
| !! | GATGCCTAGTAGTCATTTTA+AGG | - | chr4.4:80308641-80308660 | None:intergenic | 35.0% |
| !! | GTGTTATTTAGTTCTGCTTC+AGG | + | chr4.4:80306998-80307017 | MS.gene80767:CDS | 35.0% |
| !! | GTTGATAGTAGCTTGTTTAG+TGG | + | chr4.4:80306897-80306916 | MS.gene80767:CDS | 35.0% |
| !! | GTTGATTTTATGACTAGTGG+CGG | + | chr4.4:80308862-80308881 | MS.gene80767:CDS | 35.0% |
| !! | TTGCAATTCATCTTTTCAGG+TGG | + | chr4.4:80308337-80308356 | MS.gene80767:intron | 35.0% |
| !!! | CATGATATTTGTTTTTGGGG+TGG | + | chr4.4:80306544-80306563 | MS.gene80767:intron | 35.0% |
| !!! | TGCTTCAGGCTTTGTTTTTA+GGG | + | chr4.4:80307012-80307031 | MS.gene80767:CDS | 35.0% |
| !!! | TGGTGTTTTGTGTGTTGTTT+GGG | + | chr4.4:80306704-80306723 | MS.gene80767:intron | 35.0% |
| AAACCAGACTCTTCCAACAA+TGG | - | chr4.4:80307597-80307616 | None:intergenic | 40.0% | |
| AAGAAAAATTGGGGACGAGA+AGG | - | chr4.4:80306091-80306110 | None:intergenic | 40.0% | |
| AATTGCACCCCTCATAAGAA+AGG | + | chr4.4:80308891-80308910 | MS.gene80767:CDS | 40.0% | |
| ACAACAACAAAACTACTGCC+TGG | - | chr4.4:80306824-80306843 | None:intergenic | 40.0% | |
| ACTTGGGTTATCGACATACT+TGG | + | chr4.4:80307621-80307640 | MS.gene80767:CDS | 40.0% | |
| AGAAAAATTGGGGACGAGAA+GGG | - | chr4.4:80306090-80306109 | None:intergenic | 40.0% | |
| AGAAGGCCAATGATATTGGT+TGG | + | chr4.4:80308157-80308176 | MS.gene80767:CDS | 40.0% | |
| AGTGTATATACAGAGGGAAC+TGG | + | chr4.4:80308383-80308402 | MS.gene80767:CDS | 40.0% | |
| ATAGGTTTGATCAACACTCG+GGG | - | chr4.4:80307856-80307875 | None:intergenic | 40.0% | |
| ATGGCAATAAGCAATGCAAG+CGG | - | chr4.4:80308825-80308844 | None:intergenic | 40.0% | |
| ATGTACTTAACCTGCATAGG+AGG | - | chr4.4:80307113-80307132 | None:intergenic | 40.0% | |
| CAATTGTCTCTTTAGCTAGC+AGG | + | chr4.4:80309117-80309136 | MS.gene80767:intron | 40.0% | |
| CATCAGAAGGCCAATGATAT+TGG | + | chr4.4:80308153-80308172 | MS.gene80767:CDS | 40.0% | |
| CCTCCAATTGTTCTTCTACA+CGG | + | chr4.4:80307449-80307468 | MS.gene80767:CDS | 40.0% | |
| CTTAGCAACCTTACCTAGAT+CGG | + | chr4.4:80308409-80308428 | MS.gene80767:CDS | 40.0% | |
| CTTGGTCCAACCAATATCAT+TGG | - | chr4.4:80308166-80308185 | None:intergenic | 40.0% | |
| GACGCTAGTGTATATACAGA+GGG | + | chr4.4:80308377-80308396 | MS.gene80767:CDS | 40.0% | |
| GCAGGTTAAGTACATCTTGT+TGG | + | chr4.4:80307118-80307137 | MS.gene80767:intron | 40.0% | |
| GCATTGTTTCACTGTGTTGA+GGG | + | chr4.4:80308093-80308112 | MS.gene80767:intron | 40.0% | |
| GGAGATATTTACCCCAACAT+AGG | - | chr4.4:80308438-80308457 | None:intergenic | 40.0% | |
| GGTTATCGACATACTTGGTT+GGG | + | chr4.4:80307626-80307645 | MS.gene80767:CDS | 40.0% | |
| GTTATCGACATACTTGGTTG+GGG | + | chr4.4:80307627-80307646 | MS.gene80767:CDS | 40.0% | |
| TATCCATTGTTGGAAGAGTC+TGG | + | chr4.4:80307591-80307610 | MS.gene80767:CDS | 40.0% | |
| TCAAGAACTTTGTGCTTGGT+TGG | + | chr4.4:80308725-80308744 | MS.gene80767:intron | 40.0% | |
| TCACGTCTTAATATCCACCA+CGG | + | chr4.4:80308255-80308274 | MS.gene80767:intron | 40.0% | |
| TGACGCTAGTGTATATACAG+AGG | + | chr4.4:80308376-80308395 | MS.gene80767:CDS | 40.0% | |
| TGCATTGTTTCACTGTGTTG+AGG | + | chr4.4:80308092-80308111 | MS.gene80767:intron | 40.0% | |
| TGTCATTGTCACTGTTGTGT+CGG | - | chr4.4:80307904-80307923 | None:intergenic | 40.0% | |
| TTCTTCTACACGGTTTCGAT+AGG | + | chr4.4:80307459-80307478 | MS.gene80767:CDS | 40.0% | |
| TTGACACAACTGCTCATGAT+GGG | - | chr4.4:80307407-80307426 | None:intergenic | 40.0% | |
| TTTGGAAGTCCTACATCAGA+AGG | + | chr4.4:80308140-80308159 | MS.gene80767:CDS | 40.0% | |
| ! | AGCAGGGAACTATTCTTTTG+AGG | + | chr4.4:80309134-80309153 | MS.gene80767:CDS | 40.0% |
| ! | CAAGGAGGAAGATTTTCTGA+TGG | - | chr4.4:80307759-80307778 | None:intergenic | 40.0% |
| ! | CTTTTACCCCTTTCTCTGTA+AGG | + | chr4.4:80307698-80307717 | MS.gene80767:intron | 40.0% |
| ! | GTCCCCAATTTTTCTTTGGT+TGG | + | chr4.4:80306095-80306114 | MS.gene80767:intron | 40.0% |
| ! | TCTCGTCCCCAATTTTTCTT+TGG | + | chr4.4:80306091-80306110 | MS.gene80767:intron | 40.0% |
| ! | TTGTTTAGTGGGTCTGTTTG+CGG | + | chr4.4:80306909-80306928 | MS.gene80767:CDS | 40.0% |
| !! | CTTTGTGCTTGGTTGGTAAT+AGG | + | chr4.4:80308732-80308751 | MS.gene80767:intron | 40.0% |
| !! | GTGGTGTTTTGTGTGTTGTT+TGG | + | chr4.4:80306703-80306722 | MS.gene80767:intron | 40.0% |
| !! | TATCATTGGCCTTCTGATGT+AGG | - | chr4.4:80308152-80308171 | None:intergenic | 40.0% |
| !! | TCAAAGTGTTGTCATGGCAA+TGG | + | chr4.4:80306585-80306604 | MS.gene80767:intron | 40.0% |
| !! | TTTAGTGAGTTGGTTCTTGG+TGG | + | chr4.4:80307041-80307060 | MS.gene80767:CDS | 40.0% |
| !!! | AAGAGTCTGGTTTTGAGACT+TGG | + | chr4.4:80307604-80307623 | MS.gene80767:CDS | 40.0% |
| !!! | ACTCTTTTTTCCTCCTATGC+AGG | + | chr4.4:80307100-80307119 | MS.gene80767:CDS | 40.0% |
| !!! | AGAGTCTGGTTTTGAGACTT+GGG | + | chr4.4:80307605-80307624 | MS.gene80767:CDS | 40.0% |
| !!! | CTGCTTCAGGCTTTGTTTTT+AGG | + | chr4.4:80307011-80307030 | MS.gene80767:CDS | 40.0% |
| !!! | CTTCAGGCTTTGTTTTTAGG+GGG | + | chr4.4:80307014-80307033 | MS.gene80767:CDS | 40.0% |
| !!! | GCTTCAGGCTTTGTTTTTAG+GGG | + | chr4.4:80307013-80307032 | MS.gene80767:CDS | 40.0% |
| !!! | GGTGTTTTGTGTGTTGTTTG+GGG | + | chr4.4:80306705-80306724 | MS.gene80767:intron | 40.0% |
| !!! | GTGTTTTGTGTGTTGTTTGG+GGG | + | chr4.4:80306706-80306725 | MS.gene80767:intron | 40.0% |
| !!! | TTCAGGCTTTGTTTTTAGGG+GGG | + | chr4.4:80307015-80307034 | MS.gene80767:CDS | 40.0% |
| AAATCTTCCTCCTTGTGACG+TGG | + | chr4.4:80307764-80307783 | MS.gene80767:CDS | 45.0% | |
| AACTCACATTAGTCCCGTCA+AGG | - | chr4.4:80308611-80308630 | None:intergenic | 45.0% | |
| ACTACTGTCATCATACCCCA+TGG | - | chr4.4:80309017-80309036 | None:intergenic | 45.0% | |
| AGTGGAGTTTGTGCTGTCAT+AGG | + | chr4.4:80306766-80306785 | MS.gene80767:CDS | 45.0% | |
| AGTGTCTGTGTTCCTTGTGT+GGG | + | chr4.4:80306857-80306876 | MS.gene80767:CDS | 45.0% | |
| ATAGGCTACCGATCTAGGTA+AGG | - | chr4.4:80308420-80308439 | None:intergenic | 45.0% | |
| CATCAGACCTTCTTACCATG+GGG | + | chr4.4:80308999-80309018 | MS.gene80767:intron | 45.0% | |
| CATCATACCCCATGGTAAGA+AGG | - | chr4.4:80309009-80309028 | None:intergenic | 45.0% | |
| CATCATGAGCAGTTGTGTCA+AGG | + | chr4.4:80307406-80307425 | MS.gene80767:CDS | 45.0% | |
| CCGTGTAGAAGAACAATTGG+AGG | - | chr4.4:80307452-80307471 | None:intergenic | 45.0% | |
| CTAGATCGGTAGCCTATGTT+GGG | + | chr4.4:80308423-80308442 | MS.gene80767:CDS | 45.0% | |
| CTTGACACAACTGCTCATGA+TGG | - | chr4.4:80307408-80307427 | None:intergenic | 45.0% | |
| GCATCAGACCTTCTTACCAT+GGG | + | chr4.4:80308998-80309017 | MS.gene80767:intron | 45.0% | |
| GCATTGCTTATTGCCATGGT+GGG | + | chr4.4:80308828-80308847 | MS.gene80767:CDS | 45.0% | |
| GCGTAAGGACATGTTAGTGA+AGG | - | chr4.4:80308583-80308602 | None:intergenic | 45.0% | |
| GCTTGCATTGCTTATTGCCA+TGG | + | chr4.4:80308824-80308843 | MS.gene80767:CDS | 45.0% | |
| GGGTTATCGACATACTTGGT+TGG | + | chr4.4:80307625-80307644 | MS.gene80767:CDS | 45.0% | |
| GGTTGGGGTTTCTCTGATTT+AGG | + | chr4.4:80307642-80307661 | MS.gene80767:CDS | 45.0% | |
| GTCATTGTCACTGTTGTGTC+GGG | - | chr4.4:80307903-80307922 | None:intergenic | 45.0% | |
| GTTTGTGCTGTCATAGGTTC+TGG | + | chr4.4:80306772-80306791 | MS.gene80767:CDS | 45.0% | |
| TAATTGGCTGTCTTCACCGA+TGG | + | chr4.4:80308039-80308058 | MS.gene80767:intron | 45.0% | |
| TAGATCGGTAGCCTATGTTG+GGG | + | chr4.4:80308424-80308443 | MS.gene80767:CDS | 45.0% | |
| TCATCGTTGCTGAAAAACGC+AGG | + | chr4.4:80305992-80306011 | MS.gene80767:intron | 45.0% | |
| TCTTTCCAAAAACTGTGCCG+TGG | - | chr4.4:80308275-80308294 | None:intergenic | 45.0% | |
| TGACAGTAGTCACTTGCTTG+TGG | + | chr4.4:80309027-80309046 | MS.gene80767:intron | 45.0% | |
| TGCATCAGACCTTCTTACCA+TGG | + | chr4.4:80308997-80309016 | MS.gene80767:intron | 45.0% | |
| TGCATTGCTTATTGCCATGG+TGG | + | chr4.4:80308827-80308846 | MS.gene80767:CDS | 45.0% | |
| TGCTTACACTGTTTGGCATC+AGG | + | chr4.4:80308509-80308528 | MS.gene80767:intron | 45.0% | |
| TTTGATACCACGTCACAAGG+AGG | - | chr4.4:80307774-80307793 | None:intergenic | 45.0% | |
| ! | ATATTGGTTGGACCAAGCCT+CGG | + | chr4.4:80308169-80308188 | MS.gene80767:CDS | 45.0% |
| ! | TGTCATAGGTTCTGGCTGTT+CGG | + | chr4.4:80306780-80306799 | MS.gene80767:CDS | 45.0% |
| ! | TTTGTCTTGGGGGGTTGATT+CGG | + | chr4.4:80306669-80306688 | MS.gene80767:intron | 45.0% |
| !! | AATCCTCGCTTTTGTCTTGG+GGG | + | chr4.4:80306659-80306678 | MS.gene80767:intron | 45.0% |
| !! | CGAATCCTCGCTTTTGTCTT+GGG | + | chr4.4:80306657-80306676 | MS.gene80767:intron | 45.0% |
| !! | CGTTTTGATACCACGTCACA+AGG | - | chr4.4:80307777-80307796 | None:intergenic | 45.0% |
| !! | GAATCCTCGCTTTTGTCTTG+GGG | + | chr4.4:80306658-80306677 | MS.gene80767:intron | 45.0% |
| !! | GCGTTTTTCAGCAACGATGA+GGG | - | chr4.4:80305992-80306011 | None:intergenic | 45.0% |
| !! | TCGAATCCTCGCTTTTGTCT+TGG | + | chr4.4:80306656-80306675 | MS.gene80767:intron | 45.0% |
| !! | TGCGTTTTTCAGCAACGATG+AGG | - | chr4.4:80305993-80306012 | None:intergenic | 45.0% |
| !!! | AGGGGGGTTTTTTAGTGAGT+TGG | + | chr4.4:80307031-80307050 | MS.gene80767:CDS | 45.0% |
| !!! | TGTTTTTGGGGTGGATGAGT+TGG | + | chr4.4:80306553-80306572 | MS.gene80767:intron | 45.0% |
| !!! | TTTTGTGTGTTGTTTGGGGG+TGG | + | chr4.4:80306709-80306728 | MS.gene80767:intron | 45.0% |
| !!! | AATATTTTATGTTAATTTTA+TGG | + | chr4.4:80308921-80308940 | MS.gene80767:intron | 5.0% |
| ACAGTAGCATCATCCCACCA+TGG | - | chr4.4:80308844-80308863 | None:intergenic | 50.0% | |
| CACATTAGTCCCGTCAAGGA+TGG | - | chr4.4:80308607-80308626 | None:intergenic | 50.0% | |
| CAGCACAAACTCCACTGAAC+CGG | - | chr4.4:80306762-80306781 | None:intergenic | 50.0% | |
| CAGTGTCTGTGTTCCTTGTG+TGG | + | chr4.4:80306856-80306875 | MS.gene80767:CDS | 50.0% | |
| CCAACATAGGCTACCGATCT+AGG | - | chr4.4:80308425-80308444 | None:intergenic | 50.0% | |
| CCTAGATCGGTAGCCTATGT+TGG | + | chr4.4:80308422-80308441 | MS.gene80767:CDS | 50.0% | |
| CTGTGTTCCTTGTGTGGGAA+GGG | + | chr4.4:80306862-80306881 | MS.gene80767:CDS | 50.0% | |
| TCCTTACGCACCATCCTTGA+CGG | + | chr4.4:80308594-80308613 | MS.gene80767:CDS | 50.0% | |
| TCTGTGTTCCTTGTGTGGGA+AGG | + | chr4.4:80306861-80306880 | MS.gene80767:CDS | 50.0% | |
| TGGATGGCACATACAGCTTC+TGG | - | chr4.4:80308229-80308248 | None:intergenic | 50.0% | |
| TGTGTTCCTTGTGTGGGAAG+GGG | + | chr4.4:80306863-80306882 | MS.gene80767:CDS | 50.0% | |
| TTCCAAAAACTGTGCCGTGG+TGG | - | chr4.4:80308272-80308291 | None:intergenic | 50.0% | |
| ! | ATAGGTTCTGGCTGTTCGGT+GGG | + | chr4.4:80306784-80306803 | MS.gene80767:CDS | 50.0% |
| ! | ATCCACCACGGCACAGTTTT+TGG | + | chr4.4:80308267-80308286 | MS.gene80767:intron | 50.0% |
| ! | TTGTGCTGGTGGTTCTCTGT+GGG | + | chr4.4:80306976-80306995 | MS.gene80767:CDS | 50.0% |
| ! | TTTAGTGGGTCTGTTTGCGG+TGG | + | chr4.4:80306912-80306931 | MS.gene80767:CDS | 50.0% |
| !! | ATCCTCGCTTTTGTCTTGGG+GGG | + | chr4.4:80306660-80306679 | MS.gene80767:intron | 50.0% |
| !! | CTATGTAGCACCGACACATG+TGG | - | chr4.4:80307966-80307985 | None:intergenic | 50.0% |
| !! | TGAGTTGGTTCTTGGTGGAG+AGG | + | chr4.4:80307046-80307065 | MS.gene80767:CDS | 50.0% |
| !!! | TTTTGGGGTGGATGAGTTGG+TGG | + | chr4.4:80306556-80306575 | MS.gene80767:intron | 50.0% |
| AACCCCCCAAGACAAAAGCG+AGG | - | chr4.4:80306665-80306684 | None:intergenic | 55.0% | |
| ACCACGCCAGGACAGTATAC+AGG | - | chr4.4:80306957-80306976 | None:intergenic | 55.0% | |
| CAAGCGGCCCACCTATAAAG+AGG | - | chr4.4:80308809-80308828 | None:intergenic | 55.0% | |
| CAATGGCAACAGCAGAACCG+AGG | - | chr4.4:80308189-80308208 | None:intergenic | 55.0% | |
| CCTTACGCACCATCCTTGAC+GGG | + | chr4.4:80308595-80308614 | MS.gene80767:CDS | 55.0% | |
| GAGCAGTTGTGTCAAGGCAC+TGG | + | chr4.4:80307412-80307431 | MS.gene80767:CDS | 55.0% | |
| GTGTTCCTTGTGTGGGAAGG+GGG | + | chr4.4:80306864-80306883 | MS.gene80767:CDS | 55.0% | |
| TGCGAGCCTGTATACTGTCC+TGG | + | chr4.4:80306948-80306967 | MS.gene80767:CDS | 55.0% | |
| ! | CATAGGTTCTGGCTGTTCGG+TGG | + | chr4.4:80306783-80306802 | MS.gene80767:CDS | 55.0% |
| ! | GTTGTGCTGGTGGTTCTCTG+TGG | + | chr4.4:80306975-80306994 | MS.gene80767:CDS | 55.0% |
| ! | TGGGCTGTTAGGCATTGTCC+AGG | + | chr4.4:80306803-80306822 | MS.gene80767:CDS | 55.0% |
| ! | TGTTGTTTGGGGGTGGCAGT+TGG | + | chr4.4:80306716-80306735 | MS.gene80767:intron | 55.0% |
| !! | CAAGGCACTGGTGCAGAACA+AGG | + | chr4.4:80307424-80307443 | MS.gene80767:CDS | 55.0% |
| !! | CTTTGGTTCTGCCGGTTCAG+TGG | + | chr4.4:80306748-80306767 | MS.gene80767:CDS | 55.0% |
| !! | GAGAGGTGTTCCTTGCGTCA+AGG | + | chr4.4:80307063-80307082 | MS.gene80767:CDS | 55.0% |
| ATCTGCCCCCTTCCCACACA+AGG | - | chr4.4:80306872-80306891 | None:intergenic | 60.0% | |
| ATGGAGAGGGCCTTGACGCA+AGG | - | chr4.4:80307076-80307095 | None:intergenic | 60.0% | |
| CCCGTCAAGGATGGTGCGTA+AGG | - | chr4.4:80308598-80308617 | None:intergenic | 60.0% | |
| GCAACAGCAGAACCGAGGCT+TGG | - | chr4.4:80308184-80308203 | None:intergenic | 60.0% | |
| GCCTGTATACTGTCCTGGCG+TGG | + | chr4.4:80306953-80306972 | MS.gene80767:CDS | 60.0% | |
| GGTCTGTTTGCGGTGGCACT+TGG | + | chr4.4:80306919-80306938 | MS.gene80767:CDS | 60.0% | |
| TGTTTGGGGGTGGCAGTTGG+TGG | + | chr4.4:80306719-80306738 | MS.gene80767:intron | 60.0% | |
| !! | GCAGTTGGTGGTAGGGGCTT+TGG | + | chr4.4:80306731-80306750 | MS.gene80767:intron | 60.0% |
| !! | GGTAGGGGCTTTGGTTCTGC+CGG | + | chr4.4:80306740-80306759 | MS.gene80767:CDS | 60.0% |
| !! | TGGCTGTTCGGTGGGCTGTT+AGG | + | chr4.4:80306792-80306811 | MS.gene80767:CDS | 60.0% |
| ACCACCAGCACAACCACGCC+AGG | - | chr4.4:80306969-80306988 | None:intergenic | 65.0% | |
| CTGTCCTGGCGTGGTTGTGC+TGG | + | chr4.4:80306962-80306981 | MS.gene80767:CDS | 65.0% | |
| TCCTGGCGTGGTTGTGCTGG+TGG | + | chr4.4:80306965-80306984 | MS.gene80767:CDS | 65.0% | |
| !! | GGGGGTGGCAGTTGGTGGTA+GGG | + | chr4.4:80306724-80306743 | MS.gene80767:intron | 65.0% |
| !! | GGGGTGGCAGTTGGTGGTAG+GGG | + | chr4.4:80306725-80306744 | MS.gene80767:intron | 65.0% |
| !! | TGGGGGTGGCAGTTGGTGGT+AGG | + | chr4.4:80306723-80306742 | MS.gene80767:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 80305958 | 80309191 | 80305958 | ID=MS.gene80767 |
| chr4.4 | mRNA | 80305958 | 80309191 | 80305958 | ID=MS.gene80767.t1;Parent=MS.gene80767 |
| chr4.4 | exon | 80305958 | 80305972 | 80305958 | ID=MS.gene80767.t1.exon1;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80305958 | 80305972 | 80305958 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80306735 | 80307121 | 80306735 | ID=MS.gene80767.t1.exon2;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80306735 | 80307121 | 80306735 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80307386 | 80307480 | 80307386 | ID=MS.gene80767.t1.exon3;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80307386 | 80307480 | 80307386 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80307566 | 80307663 | 80307566 | ID=MS.gene80767.t1.exon4;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80307566 | 80307663 | 80307566 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80307763 | 80307812 | 80307763 | ID=MS.gene80767.t1.exon5;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80307763 | 80307812 | 80307763 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80308139 | 80308234 | 80308139 | ID=MS.gene80767.t1.exon6;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80308139 | 80308234 | 80308139 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80308356 | 80308445 | 80308356 | ID=MS.gene80767.t1.exon7;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80308356 | 80308445 | 80308356 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80308531 | 80308623 | 80308531 | ID=MS.gene80767.t1.exon8;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80308531 | 80308623 | 80308531 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80308817 | 80308912 | 80308817 | ID=MS.gene80767.t1.exon9;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80308817 | 80308912 | 80308817 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| chr4.4 | exon | 80309132 | 80309191 | 80309132 | ID=MS.gene80767.t1.exon10;Parent=MS.gene80767.t1 |
| chr4.4 | CDS | 80309132 | 80309191 | 80309132 | ID=cds.MS.gene80767.t1;Parent=MS.gene80767.t1 |
| Gene Sequence |
| Protein sequence |
