Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80824.t1 | XP_003620440.1 | 91.3 | 231 | 14 | 3 | 1 | 226 | 1 | 230 | 1.10E-104 | 389.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80824.t1 | G7KMZ9 | 91.3 | 231 | 14 | 3 | 1 | 226 | 1 | 230 | 8.1e-105 | 389.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050838 | MS.gene80824 | 0.809615 | 1.73E-50 | -1.69E-46 |
MS.gene061100 | MS.gene80824 | 0.808791 | 2.60E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80824.t1 | MTR_6g083920 | 90.476 | 231 | 16 | 3 | 1 | 226 | 1 | 230 | 1.93e-138 | 387 |
MS.gene80824.t1 | MTR_1g110370 | 38.153 | 249 | 96 | 9 | 2 | 226 | 20 | 234 | 4.55e-40 | 137 |
MS.gene80824.t1 | MTR_6g008660 | 35.600 | 250 | 103 | 10 | 2 | 226 | 24 | 240 | 1.48e-33 | 122 |
MS.gene80824.t1 | MTR_1g110360 | 32.510 | 243 | 101 | 8 | 8 | 226 | 33 | 236 | 1.01e-29 | 111 |
MS.gene80824.t1 | MTR_5g056040 | 30.522 | 249 | 119 | 5 | 4 | 224 | 23 | 245 | 8.92e-28 | 106 |
MS.gene80824.t1 | MTR_4g100570 | 28.405 | 257 | 123 | 9 | 5 | 225 | 9 | 240 | 8.59e-26 | 100 |
MS.gene80824.t1 | MTR_5g083820 | 33.607 | 244 | 103 | 7 | 8 | 226 | 31 | 240 | 1.27e-24 | 98.6 |
MS.gene80824.t1 | MTR_5g056110 | 28.631 | 241 | 103 | 9 | 5 | 224 | 22 | 214 | 1.55e-19 | 84.3 |
MS.gene80824.t1 | MTR_1g016800 | 49.123 | 57 | 29 | 0 | 165 | 221 | 213 | 269 | 1.26e-13 | 68.9 |
MS.gene80824.t1 | MTR_7g085680 | 27.014 | 211 | 115 | 5 | 17 | 223 | 20 | 195 | 2.60e-13 | 67.0 |
MS.gene80824.t1 | MTR_8g070650 | 43.860 | 57 | 32 | 0 | 165 | 221 | 171 | 227 | 2.55e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80824.t1 | AT3G18295 | 42.128 | 235 | 96 | 8 | 3 | 226 | 7 | 212 | 5.85e-34 | 121 |
MS.gene80824.t1 | AT1G68340 | 33.594 | 256 | 116 | 9 | 4 | 226 | 8 | 242 | 1.20e-30 | 113 |
MS.gene80824.t1 | AT1G68340 | 33.594 | 256 | 116 | 9 | 4 | 226 | 8 | 242 | 1.21e-30 | 113 |
MS.gene80824.t1 | AT1G25370 | 30.418 | 263 | 125 | 5 | 4 | 223 | 16 | 263 | 1.69e-29 | 111 |
MS.gene80824.t1 | AT1G25370 | 30.418 | 263 | 125 | 5 | 4 | 223 | 16 | 263 | 1.69e-29 | 111 |
MS.gene80824.t1 | AT1G68340 | 33.476 | 233 | 101 | 9 | 4 | 203 | 8 | 219 | 1.76e-25 | 100 |
MS.gene80824.t1 | AT1G48770 | 39.286 | 224 | 83 | 8 | 1 | 219 | 1 | 176 | 2.07e-25 | 98.2 |
MS.gene80824.t1 | AT1G48770 | 39.286 | 224 | 83 | 8 | 1 | 219 | 1 | 176 | 2.07e-25 | 98.2 |
MS.gene80824.t1 | AT1G48770 | 39.286 | 224 | 83 | 8 | 1 | 219 | 1 | 176 | 2.07e-25 | 98.2 |
MS.gene80824.t1 | AT3G60410 | 51.613 | 62 | 30 | 0 | 162 | 223 | 261 | 322 | 2.30e-17 | 79.7 |
MS.gene80824.t1 | AT3G60410 | 51.613 | 62 | 30 | 0 | 162 | 223 | 261 | 322 | 2.30e-17 | 79.7 |
MS.gene80824.t1 | AT3G60410 | 51.613 | 62 | 30 | 0 | 162 | 223 | 261 | 322 | 2.30e-17 | 79.7 |
MS.gene80824.t1 | AT3G03880 | 45.614 | 57 | 31 | 0 | 165 | 221 | 112 | 168 | 3.39e-11 | 60.8 |
MS.gene80824.t1 | AT4G17440 | 36.923 | 65 | 41 | 0 | 161 | 225 | 149 | 213 | 4.33e-11 | 60.8 |
MS.gene80824.t1 | AT4G17440 | 36.923 | 65 | 41 | 0 | 161 | 225 | 149 | 213 | 4.33e-11 | 60.8 |
MS.gene80824.t1 | AT4G17440 | 36.923 | 65 | 41 | 0 | 161 | 225 | 149 | 213 | 6.57e-11 | 60.5 |
MS.gene80824.t1 | AT1G55340 | 44.068 | 59 | 33 | 0 | 165 | 223 | 115 | 173 | 7.40e-11 | 59.7 |
MS.gene80824.t1 | AT1G55340 | 44.068 | 59 | 33 | 0 | 165 | 223 | 125 | 183 | 8.50e-11 | 59.7 |
Find 44 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGATGTTACCAATGTTAA+TGG | 0.270941 | 6.2:+82504410 | MS.gene80824:CDS |
TGACACATCTTAGTGTTCTT+TGG | 0.298065 | 6.2:-82504253 | None:intergenic |
TTTCATTCCCATGTTTGAAA+TGG | 0.313234 | 6.2:+82504225 | MS.gene80824:CDS |
TTCATTCCCATGTTTGAAAT+GGG | 0.340857 | 6.2:+82504226 | MS.gene80824:CDS |
GTACGAACTTTACCTCATTC+AGG | 0.366107 | 6.2:-82506051 | None:intergenic |
GATGATGAAGAAGAAGAAAA+TGG | 0.381648 | 6.2:+82504640 | MS.gene80824:CDS |
ATTCTAATGCTGTTAGGCCT+TGG | 0.418513 | 6.2:+82504489 | MS.gene80824:CDS |
TGTTTCTCTTTCTAAGGAAG+AGG | 0.443092 | 6.2:+82504691 | MS.gene80824:CDS |
AGACACTTCTTCCTGGGATG+TGG | 0.448207 | 6.2:+82505986 | MS.gene80824:intron |
GGCGATGCCGTCGTCGGTAC+CGG | 0.449421 | 6.2:+82504556 | MS.gene80824:CDS |
TTCTTCTTCTTCATCATCAA+AGG | 0.459416 | 6.2:-82504635 | None:intergenic |
TCTTTGACGAACAACATCAA+TGG | 0.466334 | 6.2:-82504318 | None:intergenic |
ACCATTGCCAACAACATCAT+TGG | 0.473245 | 6.2:-82504465 | None:intergenic |
ATGGTGATTCTAATGCTGTT+AGG | 0.480885 | 6.2:+82504483 | MS.gene80824:CDS |
GTTTCTGACGTTCCTGAATG+AGG | 0.488717 | 6.2:+82506039 | MS.gene80824:CDS |
CTTCTTGTTCTCAAATTCCA+AGG | 0.493657 | 6.2:-82504506 | None:intergenic |
GTTGTTGCCAATGATGTTGT+TGG | 0.495601 | 6.2:+82504458 | MS.gene80824:CDS |
TTCATCATCAAAGGTGAAGA+AGG | 0.495692 | 6.2:-82504626 | None:intergenic |
GTACCGGTGGTGAAAGATGA+AGG | 0.503918 | 6.2:+82504572 | MS.gene80824:CDS |
CTCCCTTCATCTTTCACCAC+CGG | 0.510421 | 6.2:-82504575 | None:intergenic |
TGTTGTTCGTCAAAGAATCA+TGG | 0.518717 | 6.2:+82504325 | MS.gene80824:CDS |
GCCAATGATGTTGTTGGCAA+TGG | 0.522875 | 6.2:+82504464 | MS.gene80824:CDS |
TTGGGACTAGACCACCTAGA+AGG | 0.530301 | 6.2:+82504738 | MS.gene80824:CDS |
ATGTAAAGCACCACTGGTAC+CGG | 0.530517 | 6.2:+82504535 | MS.gene80824:CDS |
TGGTTACCCCATTTCAAACA+TGG | 0.539045 | 6.2:-82504233 | None:intergenic |
TCCTGGGATGTGGCTGTCGG+AGG | 0.541246 | 6.2:+82505996 | MS.gene80824:CDS |
AGCTGCATGTAAAGCACCAC+TGG | 0.548134 | 6.2:+82504529 | MS.gene80824:CDS |
TCTTCCTGGGATGTGGCTGT+CGG | 0.549536 | 6.2:+82505993 | MS.gene80824:CDS |
GGTTACCCCATTTCAAACAT+GGG | 0.555356 | 6.2:-82504232 | None:intergenic |
ACCAACATGGCCATTAACAT+TGG | 0.565927 | 6.2:-82504420 | None:intergenic |
ACCTCCGACAGCCACATCCC+AGG | 0.566310 | 6.2:-82505997 | None:intergenic |
GGTACCGACGACGGCATCGC+CGG | 0.576685 | 6.2:-82504554 | None:intergenic |
GACGGCATCGCCGGTACCAG+TGG | 0.577732 | 6.2:-82504545 | None:intergenic |
TCATTCCCATGTTTGAAATG+GGG | 0.586906 | 6.2:+82504227 | MS.gene80824:CDS |
ACCAATGTTAATGGCCATGT+TGG | 0.589889 | 6.2:+82504419 | MS.gene80824:CDS |
TGGTGAAAGATGAAGGGAGG+AGG | 0.602930 | 6.2:+82504579 | MS.gene80824:CDS |
GATGCCGTCGTCGGTACCGG+TGG | 0.618149 | 6.2:+82504559 | MS.gene80824:CDS |
CATTTCTAGCATGACCAACA+TGG | 0.622666 | 6.2:-82504433 | None:intergenic |
GTTGTTCGTCAAAGAATCAT+GGG | 0.629243 | 6.2:+82504326 | MS.gene80824:CDS |
TTCACCACCGGTACCGACGA+CGG | 0.638456 | 6.2:-82504563 | None:intergenic |
GGGAATGAAAAGTTGTGTAG+TGG | 0.642191 | 6.2:-82504212 | None:intergenic |
GGTACCGGCGATGCCGTCGT+CGG | 0.647045 | 6.2:+82504550 | MS.gene80824:CDS |
TACCGGTGGTGAAAGATGAA+GGG | 0.647536 | 6.2:+82504573 | MS.gene80824:CDS |
CGGTGGTGAAAGATGAAGGG+AGG | 0.665743 | 6.2:+82504576 | MS.gene80824:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAGCTTTAAAATGTTATA+GGG | + | chr6.2:82505327-82505346 | MS.gene80824:intron | 15.0% |
!!! | TATTAGCTTTAAAATGTTAT+AGG | + | chr6.2:82505326-82505345 | MS.gene80824:intron | 15.0% |
!! | CTTACAAAATATTGTCATAT+AGG | + | chr6.2:82505725-82505744 | MS.gene80824:intron | 20.0% |
!! | TATTGTCATATAGGAAATAA+CGG | + | chr6.2:82505734-82505753 | MS.gene80824:intron | 20.0% |
!! | TTTGTACAATGTTATCAAAT+AGG | + | chr6.2:82504981-82505000 | MS.gene80824:intron | 20.0% |
!!! | TTTTGTTTTTGACATGAAAT+AGG | + | chr6.2:82505633-82505652 | MS.gene80824:intron | 20.0% |
! | AATGATGTTACCAATGTTAA+TGG | + | chr6.2:82504410-82504429 | MS.gene80824:CDS | 25.0% |
! | TGTTATCAAATAGGAAATAG+TGG | + | chr6.2:82504990-82505009 | MS.gene80824:intron | 25.0% |
!! | GATTGAAACTTTAAGCTTTT+TGG | - | chr6.2:82504369-82504388 | None:intergenic | 25.0% |
!!! | AATGGATTCATTGTTTTTGT+TGG | - | chr6.2:82504303-82504322 | None:intergenic | 25.0% |
!!! | ATTTTCTGTTTCTCTTTCTA+AGG | + | chr6.2:82504685-82504704 | MS.gene80824:CDS | 25.0% |
!!! | TGTTGATGTATTTTTTGTGT+TGG | + | chr6.2:82505610-82505629 | MS.gene80824:intron | 25.0% |
!!! | TTTCAAAGTATTGTCAATCA+TGG | - | chr6.2:82505062-82505081 | None:intergenic | 25.0% |
!!! | TTTGTTTGATTTTGTTGTGT+TGG | + | chr6.2:82505100-82505119 | MS.gene80824:intron | 25.0% |
ACATTGTACAAAACAACAGA+AGG | - | chr6.2:82504973-82504992 | None:intergenic | 30.0% | |
ATGAATCATGTCTCATTTGT+TGG | + | chr6.2:82505890-82505909 | MS.gene80824:intron | 30.0% | |
GATGATGAAGAAGAAGAAAA+TGG | + | chr6.2:82504640-82504659 | MS.gene80824:CDS | 30.0% | |
TTCTTCTTCTTCATCATCAA+AGG | - | chr6.2:82504638-82504657 | None:intergenic | 30.0% | |
TTTCATTCCCATGTTTGAAA+TGG | + | chr6.2:82504225-82504244 | MS.gene80824:CDS | 30.0% | |
! | AAGAGGTTGAAGAAGATTTT+TGG | + | chr6.2:82504708-82504727 | MS.gene80824:CDS | 30.0% |
! | ACAATCCTAGATCTCTTTTT+AGG | - | chr6.2:82504764-82504783 | None:intergenic | 30.0% |
! | AGAGGTTGAAGAAGATTTTT+GGG | + | chr6.2:82504709-82504728 | MS.gene80824:CDS | 30.0% |
! | ATTTTGTCAAGTTTCGACTA+TGG | + | chr6.2:82505155-82505174 | MS.gene80824:intron | 30.0% |
! | GTTTTTGTTGGAATTGTTGT+TGG | - | chr6.2:82504291-82504310 | None:intergenic | 30.0% |
! | TTCATTCCCATGTTTGAAAT+GGG | + | chr6.2:82504226-82504245 | MS.gene80824:CDS | 30.0% |
!! | TATGAAGTGTTGTCAAATAG+TGG | + | chr6.2:82505406-82505425 | MS.gene80824:intron | 30.0% |
!!! | TGTGTTGGTGTATTGTTTTT+TGG | + | chr6.2:82505115-82505134 | MS.gene80824:intron | 30.0% |
ACACTTGTACAAAATTGCGA+CGG | - | chr6.2:82505479-82505498 | None:intergenic | 35.0% | |
ATGGTGATTCTAATGCTGTT+AGG | + | chr6.2:82504483-82504502 | MS.gene80824:CDS | 35.0% | |
ATTAGTGAAGCGATCATTGT+AGG | + | chr6.2:82505828-82505847 | MS.gene80824:intron | 35.0% | |
ATTGACAACACTGCATGAAA+TGG | + | chr6.2:82505571-82505590 | MS.gene80824:intron | 35.0% | |
CTTCTTGTTCTCAAATTCCA+AGG | - | chr6.2:82504509-82504528 | None:intergenic | 35.0% | |
GTCAAATAGTGGCTATGTAA+AGG | + | chr6.2:82505417-82505436 | MS.gene80824:intron | 35.0% | |
GTTGTTCGTCAAAGAATCAT+GGG | + | chr6.2:82504326-82504345 | MS.gene80824:CDS | 35.0% | |
TCTTTGACGAACAACATCAA+TGG | - | chr6.2:82504321-82504340 | None:intergenic | 35.0% | |
TGACACATCTTAGTGTTCTT+TGG | - | chr6.2:82504256-82504275 | None:intergenic | 35.0% | |
TGTTGTTCGTCAAAGAATCA+TGG | + | chr6.2:82504325-82504344 | MS.gene80824:CDS | 35.0% | |
TTACATGAGATTGAGATCAG+TGG | + | chr6.2:82504890-82504909 | MS.gene80824:intron | 35.0% | |
TTCATCATCAAAGGTGAAGA+AGG | - | chr6.2:82504629-82504648 | None:intergenic | 35.0% | |
! | ATGAAATAGGTGTTGTCACA+TGG | + | chr6.2:82505646-82505665 | MS.gene80824:intron | 35.0% |
! | CACTCTAGCTTAGAGATATT+TGG | + | chr6.2:82505021-82505040 | MS.gene80824:intron | 35.0% |
! | TCATTCCCATGTTTGAAATG+GGG | + | chr6.2:82504227-82504246 | MS.gene80824:CDS | 35.0% |
! | TGTTTCTCTTTCTAAGGAAG+AGG | + | chr6.2:82504691-82504710 | MS.gene80824:CDS | 35.0% |
!! | AAGATTTTTGGGCTTTGGTT+GGG | + | chr6.2:82504720-82504739 | MS.gene80824:CDS | 35.0% |
!! | GGTTTCATTTCTAGCTTTGT+TGG | + | chr6.2:82505849-82505868 | MS.gene80824:intron | 35.0% |
!! | TGAAGAAGATTTTTGGGCTT+TGG | + | chr6.2:82504715-82504734 | MS.gene80824:CDS | 35.0% |
!! | TGTGTTCTGAAGTTAGTTTG+TGG | + | chr6.2:82505951-82505970 | MS.gene80824:intron | 35.0% |
!!! | TGTAGTGGTTTTGATCTTTC+TGG | - | chr6.2:82504200-82504219 | None:intergenic | 35.0% |
ACCAACATGGCCATTAACAT+TGG | - | chr6.2:82504423-82504442 | None:intergenic | 40.0% | |
ACCAATGTTAATGGCCATGT+TGG | + | chr6.2:82504419-82504438 | MS.gene80824:CDS | 40.0% | |
ACCATTGCCAACAACATCAT+TGG | - | chr6.2:82504468-82504487 | None:intergenic | 40.0% | |
AGTGGTGTCTTGTGAAATAG+TGG | + | chr6.2:82504908-82504927 | MS.gene80824:intron | 40.0% | |
ATTCTAATGCTGTTAGGCCT+TGG | + | chr6.2:82504489-82504508 | MS.gene80824:CDS | 40.0% | |
GAAGGCCTAAAAAGAGATCT+AGG | + | chr6.2:82504756-82504775 | MS.gene80824:CDS | 40.0% | |
GGGAATGAAAAGTTGTGTAG+TGG | - | chr6.2:82504215-82504234 | None:intergenic | 40.0% | |
GGTTACCCCATTTCAAACAT+GGG | - | chr6.2:82504235-82504254 | None:intergenic | 40.0% | |
GTTGTTGCCAATGATGTTGT+TGG | + | chr6.2:82504458-82504477 | MS.gene80824:CDS | 40.0% | |
TCATGCAGTGTTGTCAATCA+TGG | - | chr6.2:82505569-82505588 | None:intergenic | 40.0% | |
TGGTTACCCCATTTCAAACA+TGG | - | chr6.2:82504236-82504255 | None:intergenic | 40.0% | |
TTGTCAAGTTTCGACTATGG+AGG | + | chr6.2:82505158-82505177 | MS.gene80824:intron | 40.0% | |
! | TTTTGCAGACACTTCTTCCT+GGG | + | chr6.2:82505980-82505999 | MS.gene80824:intron | 40.0% |
! | TTTTTGCAGACACTTCTTCC+TGG | + | chr6.2:82505979-82505998 | MS.gene80824:intron | 40.0% |
!! | CATTTCTAGCATGACCAACA+TGG | - | chr6.2:82504436-82504455 | None:intergenic | 40.0% |
!! | GAAGATTTTTGGGCTTTGGT+TGG | + | chr6.2:82504719-82504738 | MS.gene80824:CDS | 40.0% |
!! | GATCTCTTTTTAGGCCTTCT+AGG | - | chr6.2:82504755-82504774 | None:intergenic | 40.0% |
GCCAATGATGTTGTTGGCAA+TGG | + | chr6.2:82504464-82504483 | MS.gene80824:CDS | 45.0% | |
TACCGGTGGTGAAAGATGAA+GGG | + | chr6.2:82504573-82504592 | MS.gene80824:CDS | 45.0% | |
! | ATGTAAAGCACCACTGGTAC+CGG | + | chr6.2:82504535-82504554 | MS.gene80824:CDS | 45.0% |
!! | CTCTTTTTAGGCCTTCTAGG+TGG | - | chr6.2:82504752-82504771 | None:intergenic | 45.0% |
!!! | AGGGAGGAGGTTTTTTGATG+TGG | + | chr6.2:82504592-82504611 | MS.gene80824:CDS | 45.0% |
!!! | GGAGGAGGTTTTTTGATGTG+GGG | + | chr6.2:82504594-82504613 | MS.gene80824:CDS | 45.0% |
!!! | GGGAGGAGGTTTTTTGATGT+GGG | + | chr6.2:82504593-82504612 | MS.gene80824:CDS | 45.0% |
ACATGGCAGCTATAGCGTAG+TGG | + | chr6.2:82505663-82505682 | MS.gene80824:intron | 50.0% | |
AGACACTTCTTCCTGGGATG+TGG | + | chr6.2:82505986-82506005 | MS.gene80824:intron | 50.0% | |
CTCCCTTCATCTTTCACCAC+CGG | - | chr6.2:82504578-82504597 | None:intergenic | 50.0% | |
TGGTGAAAGATGAAGGGAGG+AGG | + | chr6.2:82504579-82504598 | MS.gene80824:CDS | 50.0% | |
TTGGGACTAGACCACCTAGA+AGG | + | chr6.2:82504738-82504757 | MS.gene80824:CDS | 50.0% | |
! | AGCTGCATGTAAAGCACCAC+TGG | + | chr6.2:82504529-82504548 | MS.gene80824:CDS | 50.0% |
! | GTACCGGTGGTGAAAGATGA+AGG | + | chr6.2:82504572-82504591 | MS.gene80824:CDS | 50.0% |
CGGTGGTGAAAGATGAAGGG+AGG | + | chr6.2:82504576-82504595 | MS.gene80824:CDS | 55.0% | |
TCTTCCTGGGATGTGGCTGT+CGG | + | chr6.2:82505993-82506012 | MS.gene80824:CDS | 55.0% | |
!! | TTCACCACCGGTACCGACGA+CGG | - | chr6.2:82504566-82504585 | None:intergenic | 60.0% |
ACCTCCGACAGCCACATCCC+AGG | - | chr6.2:82506000-82506019 | None:intergenic | 65.0% | |
TCCTGGGATGTGGCTGTCGG+AGG | + | chr6.2:82505996-82506015 | MS.gene80824:CDS | 65.0% | |
GACGGCATCGCCGGTACCAG+TGG | - | chr6.2:82504548-82504567 | None:intergenic | 70.0% | |
GGCGATGCCGTCGTCGGTAC+CGG | + | chr6.2:82504556-82504575 | MS.gene80824:CDS | 70.0% | |
! | GATGCCGTCGTCGGTACCGG+TGG | + | chr6.2:82504559-82504578 | MS.gene80824:CDS | 70.0% |
!! | GGTACCGACGACGGCATCGC+CGG | - | chr6.2:82504557-82504576 | None:intergenic | 70.0% |
!! | GGTACCGGCGATGCCGTCGT+CGG | + | chr6.2:82504550-82504569 | MS.gene80824:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 82504191 | 82506059 | 82504191 | ID=MS.gene80824 |
chr6.2 | mRNA | 82504191 | 82506059 | 82504191 | ID=MS.gene80824.t1;Parent=MS.gene80824 |
chr6.2 | exon | 82504191 | 82504799 | 82504191 | ID=MS.gene80824.t1.exon1;Parent=MS.gene80824.t1 |
chr6.2 | CDS | 82504191 | 82504799 | 82504191 | ID=cds.MS.gene80824.t1;Parent=MS.gene80824.t1 |
chr6.2 | exon | 82505988 | 82506059 | 82505988 | ID=MS.gene80824.t1.exon2;Parent=MS.gene80824.t1 |
chr6.2 | CDS | 82505988 | 82506059 | 82505988 | ID=cds.MS.gene80824.t1;Parent=MS.gene80824.t1 |
Gene Sequence |
Protein sequence |