AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene80892

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80892.t1 MTR_6g021530 95.902 366 15 0 1 366 1 366 0.0 725
MS.gene80892.t1 MTR_7g116570 72.237 371 97 2 1 366 1 370 0.0 556
MS.gene80892.t1 MTR_7g116520 75.942 345 81 2 20 364 26 368 0.0 545
MS.gene80892.t1 MTR_7g116510 69.315 365 105 3 3 366 4 362 0.0 520
MS.gene80892.t1 MTR_1g024890 67.967 359 113 2 6 363 8 365 0.0 513
MS.gene80892.t1 MTR_7g116500 69.388 343 104 1 24 366 28 369 0.0 508
MS.gene80892.t1 MTR_7g008060 66.577 371 104 4 1 366 1 356 0.0 505
MS.gene80892.t1 MTR_4g019880 66.758 364 114 4 5 366 12 370 1.17e-178 500
MS.gene80892.t1 MTR_1g079540 69.139 337 103 1 28 364 30 365 4.74e-178 499
MS.gene80892.t1 MTR_1g069175 61.064 357 136 3 10 364 14 369 3.35e-168 474
MS.gene80892.t1 MTR_1g079530 63.788 359 120 5 8 364 7 357 6.45e-165 465
MS.gene80892.t1 MTR_1g079590 63.942 208 70 4 1 205 1 206 1.05e-87 263
MS.gene80892.t1 MTR_5g078210 40.952 315 181 5 32 345 28 338 1.47e-76 240
MS.gene80892.t1 MTR_8g079050 39.528 339 197 7 31 362 39 376 6.71e-76 239
MS.gene80892.t1 MTR_5g084750 38.535 314 186 6 31 341 32 341 2.81e-72 229
MS.gene80892.t1 MTR_3g098270 38.138 333 194 5 31 356 36 363 5.46e-72 229
MS.gene80892.t1 MTR_3g082830 38.199 322 192 6 31 349 40 357 6.87e-72 228
MS.gene80892.t1 MTR_4g122200 38.298 329 197 4 31 356 37 362 1.56e-70 225
MS.gene80892.t1 MTR_8g087890 36.986 365 213 9 6 362 8 363 3.16e-70 224
MS.gene80892.t1 MTR_3g005650 35.933 359 221 7 4 362 8 357 3.31e-70 224
MS.gene80892.t1 MTR_3g024510 38.395 349 197 8 8 350 15 351 4.73e-70 224
MS.gene80892.t1 MTR_5g074270 38.608 316 185 6 29 339 33 344 1.52e-69 222
MS.gene80892.t1 MTR_5g084770 38.730 315 185 6 31 341 30 340 6.03e-69 220
MS.gene80892.t1 MTR_4g035353 33.607 366 236 4 1 362 1 363 1.25e-68 220
MS.gene80892.t1 MTR_5g084790 34.582 347 218 7 2 344 5 346 4.08e-67 216
MS.gene80892.t1 MTR_2g033930 37.026 343 201 7 24 360 28 361 9.82e-67 215
MS.gene80892.t1 MTR_2g033920 35.556 360 224 5 4 360 12 366 2.69e-66 214
MS.gene80892.t1 MTR_3g464730 37.261 314 191 6 31 341 30 340 8.65e-66 212
MS.gene80892.t1 MTR_0565s0010 35.838 346 212 6 22 362 25 365 8.58e-65 210
MS.gene80892.t1 MTR_3g052490 36.240 367 210 10 7 362 13 366 1.15e-64 210
MS.gene80892.t1 MTR_2g100620 36.991 319 193 7 30 344 32 346 2.97e-64 208
MS.gene80892.t1 MTR_3g435540 36.070 341 208 7 8 344 3 337 5.15e-64 208
MS.gene80892.t1 MTR_5g022640 36.000 325 201 6 24 345 39 359 7.66e-64 207
MS.gene80892.t1 MTR_5g093090 34.511 368 222 8 2 361 5 361 1.69e-63 207
MS.gene80892.t1 MTR_8g075230 37.618 319 183 10 24 335 32 341 6.22e-63 205
MS.gene80892.t1 MTR_8g074570 34.060 367 215 10 7 359 16 369 8.46e-63 205
MS.gene80892.t1 MTR_5g022630 35.072 345 211 8 4 339 14 354 9.37e-62 202
MS.gene80892.t1 MTR_1g025680 36.080 352 213 7 1 344 1 348 3.10e-61 203
MS.gene80892.t1 MTR_3g023220 36.257 342 200 8 21 360 26 351 3.16e-61 201
MS.gene80892.t1 MTR_8g014910 33.807 352 220 8 1 344 1 347 5.88e-61 200
MS.gene80892.t1 MTR_3g052480 33.787 367 224 8 6 362 11 368 2.32e-60 199
MS.gene80892.t1 MTR_4g087985 34.615 364 213 9 3 346 8 366 2.61e-60 198
MS.gene80892.t1 MTR_5g009100 34.036 332 215 4 31 360 48 377 2.85e-60 199
MS.gene80892.t1 MTR_2g084585 34.000 350 219 9 1 344 1 344 6.27e-60 197
MS.gene80892.t1 MTR_1g025760 34.835 333 202 8 25 352 77 399 1.40e-59 197
MS.gene80892.t1 MTR_4g108690 37.107 318 191 6 31 344 29 341 3.23e-59 196
MS.gene80892.t1 MTR_1g025780 34.278 353 215 9 1 344 9 353 4.74e-59 195
MS.gene80892.t1 MTR_3g005660 35.207 338 210 7 30 362 37 370 7.57e-58 192
MS.gene80892.t1 MTR_1g025720 35.897 312 194 5 31 340 39 346 9.54e-58 191
MS.gene80892.t1 MTR_8g075220 36.196 326 190 13 31 345 42 360 2.19e-57 191
MS.gene80892.t1 MTR_1g025700 35.211 355 208 9 5 344 16 363 5.00e-57 190
MS.gene80892.t1 MTR_8g087870 33.433 335 208 6 30 362 30 351 9.93e-57 189
MS.gene80892.t1 MTR_3g052580 32.410 361 226 8 7 360 10 359 1.36e-56 189
MS.gene80892.t1 MTR_3g052580 32.410 361 226 8 7 360 9 358 1.43e-56 190
MS.gene80892.t1 MTR_5g078210 39.615 260 153 4 32 290 28 284 5.56e-56 186
MS.gene80892.t1 MTR_4g056280 34.097 349 220 8 1 344 1 344 8.36e-56 186
MS.gene80892.t1 MTR_2g017925 34.783 345 207 8 19 360 24 353 1.90e-55 186
MS.gene80892.t1 MTR_8g075200 34.268 321 198 11 31 345 43 356 2.48e-55 187
MS.gene80892.t1 MTR_2g015080 32.958 355 204 10 4 335 9 352 6.34e-55 184
MS.gene80892.t1 MTR_4g056160 33.046 348 220 8 5 345 4 345 1.38e-54 183
MS.gene80892.t1 MTR_2g044100 32.884 371 230 8 4 363 16 378 8.52e-54 182
MS.gene80892.t1 MTR_3g114120 33.542 319 202 6 30 344 48 360 1.04e-53 181
MS.gene80892.t1 MTR_2g017875 34.049 326 200 7 30 353 35 347 5.34e-53 179
MS.gene80892.t1 MTR_3g114090 34.579 321 202 7 27 344 35 350 7.58e-53 179
MS.gene80892.t1 MTR_8g074560 34.985 343 199 13 32 360 34 366 1.20e-52 179
MS.gene80892.t1 MTR_2g017965 34.897 341 197 8 30 360 34 359 3.45e-52 177
MS.gene80892.t1 MTR_1g079570 55.396 139 62 0 225 363 4 142 2.04e-51 168
MS.gene80892.t1 MTR_2g017955 33.531 337 198 8 13 336 9 332 3.14e-50 172
MS.gene80892.t1 MTR_5g083040 30.793 328 206 8 26 341 30 348 1.04e-48 168
MS.gene80892.t1 MTR_1g025910 32.628 331 212 5 34 360 41 364 1.80e-48 168
MS.gene80892.t1 MTR_8g031420 31.672 341 206 9 31 360 37 361 5.40e-48 166
MS.gene80892.t1 MTR_8g022810 33.131 329 198 8 28 345 40 357 1.17e-47 166
MS.gene80892.t1 MTR_8g031390 32.036 334 203 8 31 355 39 357 3.67e-47 164
MS.gene80892.t1 MTR_2g033920 35.789 285 176 4 8 290 16 295 1.93e-46 161
MS.gene80892.t1 MTR_8g031430 31.287 342 206 10 31 360 39 363 2.28e-46 162
MS.gene80892.t1 MTR_0009s0250 33.441 311 187 9 32 338 36 330 1.02e-45 160
MS.gene80892.t1 MTR_8g022790 30.769 338 217 7 29 362 37 361 8.04e-45 158
MS.gene80892.t1 MTR_8g074580 30.049 406 223 10 7 361 23 418 1.39e-44 159
MS.gene80892.t1 MTR_2g461580 30.149 335 214 7 32 363 34 351 2.35e-44 156
MS.gene80892.t1 MTR_8g031400 30.205 341 211 8 31 360 39 363 6.12e-44 155
MS.gene80892.t1 MTR_3g021460 30.931 333 208 8 32 360 34 348 1.66e-42 151
MS.gene80892.t1 MTR_2g017915 30.411 365 214 10 4 360 5 337 1.03e-41 149
MS.gene80892.t1 MTR_5g093090 32.646 291 177 8 8 290 11 290 5.09e-38 138
MS.gene80892.t1 MTR_8g031390 32.042 284 174 7 31 310 39 307 1.83e-37 137
MS.gene80892.t1 MTR_2g015580 29.759 373 227 14 10 359 28 388 6.82e-33 127
MS.gene80892.t1 MTR_1g030220 29.248 359 208 13 24 353 35 376 1.50e-31 123
MS.gene80892.t1 MTR_1g030275 29.706 340 199 11 33 346 43 368 4.46e-31 121
MS.gene80892.t1 MTR_8g089805 27.746 346 203 12 33 346 44 374 4.42e-30 119
MS.gene80892.t1 MTR_2g017925 31.224 237 149 5 127 360 25 250 7.01e-30 115
MS.gene80892.t1 MTR_1g030268 28.496 379 225 14 3 353 14 374 8.06e-30 118
MS.gene80892.t1 MTR_7g111780 29.971 347 209 13 22 353 29 356 4.90e-29 115
MS.gene80892.t1 MTR_2g018015 33.043 230 147 4 19 243 24 251 1.09e-28 113
MS.gene80892.t1 MTR_0127s0040 25.822 213 156 2 150 362 28 238 2.01e-27 108
MS.gene80892.t1 MTR_7g087190 26.857 350 204 11 33 347 47 379 3.98e-27 111
MS.gene80892.t1 MTR_5g093090 38.824 170 92 5 8 170 11 175 5.72e-27 106
MS.gene80892.t1 MTR_1g030340 28.814 354 199 14 33 353 46 379 8.65e-27 110
MS.gene80892.t1 MTR_8g022810 33.171 205 121 6 28 227 40 233 2.14e-26 107
MS.gene80892.t1 MTR_6g081170 62.069 87 29 2 37 123 1 83 2.90e-26 101
MS.gene80892.t1 MTR_1108s0010 28.959 221 142 4 133 351 3 210 2.94e-26 104
MS.gene80892.t1 MTR_2g087292 28.571 308 137 8 32 338 36 261 3.76e-26 106
MS.gene80892.t1 MTR_2g015630 28.443 334 210 12 34 346 36 361 9.94e-26 107
MS.gene80892.t1 MTR_8g028160 27.246 345 207 12 33 347 40 370 1.87e-25 106
MS.gene80892.t1 MTR_7g116870 25.210 357 223 10 24 353 28 367 1.34e-24 103
MS.gene80892.t1 MTR_2g015590 27.500 360 226 13 10 346 13 360 2.47e-24 102
MS.gene80892.t1 MTR_6g007100 27.879 330 206 10 33 347 37 349 1.46e-23 100
MS.gene80892.t1 MTR_1g082390 26.431 367 221 13 8 345 15 361 4.78e-23 99.4
MS.gene80892.t1 MTR_4g036375 33.511 188 119 5 1 185 1 185 6.09e-23 95.1
MS.gene80892.t1 MTR_5g087690 24.224 322 215 7 29 339 50 353 7.04e-23 99.0
MS.gene80892.t1 MTR_8g038680 28.926 363 210 14 19 347 12 360 8.63e-23 98.6
MS.gene80892.t1 MTR_6g007090 29.118 340 200 11 33 347 43 366 2.07e-22 97.4
MS.gene80892.t1 MTR_8g089805 25.606 289 177 9 90 346 24 306 4.20e-22 95.9
MS.gene80892.t1 MTR_3g463960 27.035 344 215 13 33 353 48 378 4.44e-22 96.7
MS.gene80892.t1 MTR_3g463950 27.035 344 215 13 33 353 48 378 4.44e-22 96.7
MS.gene80892.t1 MTR_3g463970 27.035 344 215 13 33 353 48 378 4.44e-22 96.7
MS.gene80892.t1 MTR_3g463940 27.035 344 215 13 33 353 48 378 4.44e-22 96.7
MS.gene80892.t1 MTR_1g030230 25.852 352 211 12 33 353 36 368 5.42e-22 96.3
MS.gene80892.t1 MTR_7g113860 26.989 352 208 12 33 353 33 366 1.67e-21 95.1
MS.gene80892.t1 MTR_1g060500 24.478 335 210 12 28 343 39 349 1.91e-21 94.7
MS.gene80892.t1 MTR_1g060490 24.308 325 215 12 28 343 36 338 3.63e-21 93.6
MS.gene80892.t1 MTR_7g033150 24.069 349 216 11 33 347 39 372 3.71e-21 94.0
MS.gene80892.t1 MTR_6g007095 29.619 341 197 13 33 347 45 368 6.53e-21 94.7
MS.gene80892.t1 MTR_6g007095 26.946 334 207 12 33 347 369 684 1.49e-19 90.5
MS.gene80892.t1 MTR_5g074210 33.813 139 90 1 205 341 64 202 7.12e-21 90.1
MS.gene80892.t1 MTR_7g104220 25.301 332 218 11 21 343 34 344 1.07e-20 92.4
MS.gene80892.t1 MTR_7g033165 26.012 346 209 12 33 347 37 366 2.06e-20 92.0
MS.gene80892.t1 MTR_7g111780 29.151 271 163 10 98 353 1 257 3.38e-20 89.4
MS.gene80892.t1 MTR_2g015650 28.090 356 200 16 26 346 25 359 4.85e-20 90.9
MS.gene80892.t1 MTR_3g463930 26.934 349 216 13 33 353 48 385 5.49e-20 90.9
MS.gene80892.t1 MTR_5g016030 58.209 67 28 0 247 313 7 73 8.84e-20 82.8
MS.gene80892.t1 MTR_7g113860 26.061 330 199 10 54 353 58 372 1.18e-19 89.7
MS.gene80892.t1 MTR_7g033155 25.278 360 209 13 33 347 42 386 2.89e-19 89.0
MS.gene80892.t1 MTR_1g092690 24.540 326 188 13 30 333 52 341 3.34e-19 88.2
MS.gene80892.t1 MTR_2g079090 26.171 363 222 14 8 346 4 344 3.54e-19 88.2
MS.gene80892.t1 MTR_1g030265 26.441 295 174 11 91 353 58 341 4.85e-19 87.4
MS.gene80892.t1 MTR_2g079080 26.171 363 222 14 8 346 4 344 7.61e-19 87.0
MS.gene80892.t1 MTR_1g092750 25.392 319 196 13 30 333 41 332 9.39e-19 86.7
MS.gene80892.t1 MTR_0029s0050 26.331 338 208 12 28 346 29 344 1.41e-18 86.3
MS.gene80892.t1 MTR_3g069780 26.254 339 217 13 33 350 34 360 2.05e-18 85.9
MS.gene80892.t1 MTR_0029s0100 26.331 338 208 12 28 346 29 344 2.71e-18 85.5
MS.gene80892.t1 MTR_1g030268 28.105 306 186 11 3 290 14 303 2.97e-18 85.1
MS.gene80892.t1 MTR_3g438030 25.959 339 218 13 33 350 34 360 1.36e-17 83.6
MS.gene80892.t1 MTR_2g043980 27.697 343 197 14 33 353 38 351 2.08e-17 82.8
MS.gene80892.t1 MTR_1g092760 24.847 326 188 14 30 333 40 330 4.48e-16 79.0
MS.gene80892.t1 MTR_6g049220 48.315 89 44 2 30 117 31 118 9.33e-16 74.7
MS.gene80892.t1 MTR_7g113860 24.727 275 171 7 106 353 33 298 2.05e-15 76.6
MS.gene80892.t1 MTR_2g017895 26.038 265 168 6 77 339 4 242 2.29e-15 75.9
MS.gene80892.t1 MTR_1g092740 23.780 328 213 13 30 345 39 341 4.44e-15 75.9
MS.gene80892.t1 MTR_3g069520 26.377 345 207 16 33 350 34 358 5.60e-15 75.9
MS.gene80892.t1 MTR_8g012540 27.554 323 192 12 19 314 12 319 4.99e-13 69.7
MS.gene80892.t1 MTR_5g084880 31.532 111 75 1 181 290 2 112 1.96e-12 64.7
MS.gene80892.t1 MTR_7g033165 27.451 255 147 11 33 265 37 275 9.23e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene80892.t1 AT5G33370 69.679 343 103 1 24 366 25 366 0.0 513
MS.gene80892.t1 AT3G04290 66.298 362 117 2 4 365 8 364 2.20e-180 505
MS.gene80892.t1 AT5G18430 65.574 366 116 5 1 362 3 362 6.17e-176 493
MS.gene80892.t1 AT4G28780 67.160 338 108 3 28 364 30 365 6.03e-171 481
MS.gene80892.t1 AT5G33370 69.663 267 80 1 24 290 25 290 1.42e-137 395
MS.gene80892.t1 AT3G50400 41.317 334 187 9 31 356 36 368 4.00e-79 247
MS.gene80892.t1 AT2G23540 39.286 336 196 7 31 359 50 384 1.89e-77 243
MS.gene80892.t1 AT5G37690 40.764 314 181 5 32 344 30 339 2.63e-74 234
MS.gene80892.t1 AT2G04570 36.261 353 211 10 1 347 1 345 1.38e-70 224
MS.gene80892.t1 AT1G71691 37.910 335 201 6 30 363 56 384 3.72e-70 224
MS.gene80892.t1 AT2G42990 38.006 321 192 6 31 348 30 346 9.56e-70 223
MS.gene80892.t1 AT5G08460 36.134 357 222 4 7 359 28 382 2.52e-69 223
MS.gene80892.t1 AT5G15720 36.795 337 206 4 30 362 31 364 6.00e-69 221
MS.gene80892.t1 AT5G37690 39.172 314 178 6 32 344 30 331 1.17e-68 219
MS.gene80892.t1 AT4G26790 37.224 317 192 6 31 344 31 343 3.92e-68 218
MS.gene80892.t1 AT4G26790 37.224 317 192 6 31 344 31 343 3.92e-68 218
MS.gene80892.t1 AT5G42170 36.478 318 192 6 30 344 51 361 5.32e-67 216
MS.gene80892.t1 AT5G03820 37.609 343 202 7 10 344 11 349 6.44e-67 215
MS.gene80892.t1 AT1G75890 38.199 322 186 9 24 339 43 357 1.33e-66 215
MS.gene80892.t1 AT5G03810 37.758 339 200 7 13 344 11 345 1.45e-66 214
MS.gene80892.t1 AT1G29660 35.854 357 222 5 9 362 12 364 1.66e-66 214
MS.gene80892.t1 AT5G03820 37.609 343 202 7 10 344 39 377 2.23e-66 215
MS.gene80892.t1 AT1G75890 38.199 322 186 9 24 339 72 386 2.53e-66 215
MS.gene80892.t1 AT5G45670 36.550 342 210 5 1 339 1 338 7.12e-66 213
MS.gene80892.t1 AT4G18970 38.535 314 184 5 30 339 29 337 5.42e-65 211
MS.gene80892.t1 AT1G29670 35.068 365 225 6 4 362 5 363 6.17e-65 210
MS.gene80892.t1 AT1G71250 33.724 341 221 3 24 362 36 373 7.01e-65 211
MS.gene80892.t1 AT1G75880 35.028 354 217 6 2 345 18 368 1.01e-64 210
MS.gene80892.t1 AT4G18970 38.535 314 184 5 30 339 29 337 2.78e-64 210
MS.gene80892.t1 AT1G06990 35.987 314 193 5 30 339 38 347 3.22e-64 208
MS.gene80892.t1 AT1G75890 36.336 333 190 9 24 339 43 370 3.70e-64 209
MS.gene80892.t1 AT1G29670 35.068 365 225 6 4 362 73 431 3.81e-64 210
MS.gene80892.t1 AT1G75880 35.028 354 216 7 2 345 18 367 8.66e-64 208
MS.gene80892.t1 AT1G58430 35.692 325 202 6 31 351 37 358 1.99e-63 206
MS.gene80892.t1 AT3G16370 36.792 318 193 7 31 344 32 345 3.63e-63 206
MS.gene80892.t1 AT5G41890 33.777 376 215 10 2 356 7 369 5.72e-63 206
MS.gene80892.t1 AT1G33811 36.705 346 208 8 24 362 29 370 6.97e-63 205
MS.gene80892.t1 AT2G24560 35.806 310 186 7 31 333 36 339 7.38e-63 205
MS.gene80892.t1 AT2G31540 37.421 318 186 7 31 341 37 348 8.43e-63 205
MS.gene80892.t1 AT3G53100 36.416 346 209 9 12 352 12 351 1.34e-62 204
MS.gene80892.t1 AT1G74460 36.795 337 206 7 7 341 3 334 2.60e-62 204
MS.gene80892.t1 AT2G30220 36.280 328 196 7 31 351 35 356 3.57e-62 203
MS.gene80892.t1 AT5G22810 36.137 321 193 8 31 344 36 351 2.47e-60 198
MS.gene80892.t1 AT2G30310 35.737 319 192 7 30 341 35 347 8.72e-60 197
MS.gene80892.t1 AT3G14820 34.421 337 202 9 23 352 26 350 7.78e-59 194
MS.gene80892.t1 AT5G45950 34.462 325 203 9 29 351 40 356 1.97e-58 193
MS.gene80892.t1 AT1G20120 34.295 312 198 6 31 339 80 387 3.34e-58 194
MS.gene80892.t1 AT5G45960 35.350 314 188 8 31 335 49 356 5.12e-58 193
MS.gene80892.t1 AT1G59406 34.286 350 216 8 7 350 8 349 6.37e-58 192
MS.gene80892.t1 AT1G59030 34.286 350 216 8 7 350 8 349 6.37e-58 192
MS.gene80892.t1 AT1G58725 34.286 350 216 8 7 350 8 349 6.37e-58 192
MS.gene80892.t1 AT2G19060 34.365 323 189 9 30 346 31 336 1.68e-57 191
MS.gene80892.t1 AT1G75900 34.906 318 191 8 31 341 45 353 2.83e-57 191
MS.gene80892.t1 AT2G40250 32.808 317 200 5 33 341 40 351 4.78e-56 187
MS.gene80892.t1 AT1G58520 35.119 336 197 9 21 350 22 342 6.35e-56 186
MS.gene80892.t1 AT1G58525 35.119 336 197 9 21 350 22 342 6.35e-56 186
MS.gene80892.t1 AT1G20132 33.229 319 205 7 24 339 57 370 6.67e-55 185
MS.gene80892.t1 AT2G19050 32.915 319 197 6 30 346 32 335 2.16e-54 182
MS.gene80892.t1 AT1G20135 34.132 334 200 9 12 340 9 327 1.02e-53 180
MS.gene80892.t1 AT3G43570 32.464 345 194 9 10 350 11 320 1.92e-53 179
MS.gene80892.t1 AT5G55050 32.743 339 214 8 32 361 42 375 2.84e-53 181
MS.gene80892.t1 AT4G10950 31.832 333 223 4 30 360 72 402 4.38e-53 181
MS.gene80892.t1 AT2G19010 32.295 353 216 10 3 350 6 340 1.24e-52 178
MS.gene80892.t1 AT4G30140 34.018 341 204 9 21 360 27 347 1.54e-52 178
MS.gene80892.t1 AT1G71691 34.737 285 181 5 80 363 3 283 2.95e-52 175
MS.gene80892.t1 AT2G19010 33.742 326 195 9 30 350 61 370 4.16e-52 177
MS.gene80892.t1 AT4G10950 31.737 334 218 6 30 360 72 398 4.08e-50 173
MS.gene80892.t1 AT2G24560 34.686 271 164 7 31 294 36 300 4.43e-49 168
MS.gene80892.t1 AT1G20130 33.537 328 199 10 24 339 200 520 6.61e-49 172
MS.gene80892.t1 AT1G20130 33.537 328 199 10 24 339 180 500 8.00e-49 172
MS.gene80892.t1 AT5G40990 32.565 347 211 8 30 363 38 374 5.05e-48 167
MS.gene80892.t1 AT5G15720 32.517 286 189 3 81 362 48 333 5.98e-48 165
MS.gene80892.t1 AT4G16230 42.411 224 119 5 12 229 10 229 6.70e-48 163
MS.gene80892.t1 AT5G15720 36.059 269 165 4 30 294 31 296 1.03e-47 164
MS.gene80892.t1 AT1G71691 38.550 262 154 6 30 290 56 311 1.28e-47 164
MS.gene80892.t1 AT1G53940 33.524 349 203 12 31 363 41 376 2.73e-47 165
MS.gene80892.t1 AT1G73610 33.636 330 199 8 25 351 31 343 5.29e-47 163
MS.gene80892.t1 AT1G71120 33.138 341 206 12 24 356 26 352 8.36e-47 163
MS.gene80892.t1 AT5G63170 33.657 309 184 9 31 335 30 321 1.32e-45 159
MS.gene80892.t1 AT2G19050 34.375 256 157 4 30 283 32 278 1.12e-44 155
MS.gene80892.t1 AT1G53920 29.558 362 226 9 3 346 14 364 1.09e-43 155
MS.gene80892.t1 AT1G75920 31.373 357 204 12 10 346 6 341 4.39e-43 153
MS.gene80892.t1 AT3G14225 30.347 346 220 7 31 362 39 377 1.11e-42 152
MS.gene80892.t1 AT3G14225 30.398 352 208 8 31 362 39 373 1.35e-42 152
MS.gene80892.t1 AT1G53990 30.747 348 211 9 31 365 37 367 1.61e-42 152
MS.gene80892.t1 AT3G43550 34.066 273 169 6 21 290 22 286 7.70e-41 145
MS.gene80892.t1 AT2G03980 30.696 316 202 8 30 338 44 349 1.92e-39 144
MS.gene80892.t1 AT2G03980 30.696 316 202 8 30 338 44 349 1.92e-39 144
MS.gene80892.t1 AT2G03980 30.696 316 202 8 30 338 44 349 1.92e-39 144
MS.gene80892.t1 AT2G03980 30.696 316 202 8 30 338 44 349 1.92e-39 144
MS.gene80892.t1 AT1G75920 30.108 372 204 13 10 346 1 351 2.73e-39 143
MS.gene80892.t1 AT1G75910 30.836 347 215 10 12 346 8 341 4.34e-39 142
MS.gene80892.t1 AT1G23500 32.432 333 203 9 20 348 27 341 1.20e-38 141
MS.gene80892.t1 AT1G75930 31.014 345 213 11 10 344 6 335 8.32e-38 139
MS.gene80892.t1 AT2G31550 33.019 212 133 3 137 343 2 209 8.33e-37 133
MS.gene80892.t1 AT1G75920 29.830 352 185 11 10 346 6 310 2.16e-34 129
MS.gene80892.t1 AT1G75920 29.967 307 178 11 56 346 28 313 5.44e-31 120
MS.gene80892.t1 AT1G56670 30.537 298 176 8 66 345 73 357 2.08e-30 119
MS.gene80892.t1 AT3G14220 27.072 362 214 15 23 365 26 356 9.76e-29 115
MS.gene80892.t1 AT1G53940 32.234 273 162 11 31 293 41 300 1.45e-28 113
MS.gene80892.t1 AT1G54030 27.139 339 217 12 28 362 51 363 5.17e-28 114
MS.gene80892.t1 AT2G04020 32.895 228 133 6 30 247 44 261 8.10e-28 110
MS.gene80892.t1 AT1G09390 28.190 337 209 9 26 345 34 354 7.30e-27 110
MS.gene80892.t1 AT2G04020 28.115 313 168 10 30 336 44 305 8.08e-27 108
MS.gene80892.t1 AT3G09930 26.786 336 212 13 27 349 37 351 2.39e-26 108
MS.gene80892.t1 AT3G09930 26.786 336 212 13 27 349 37 351 2.39e-26 108
MS.gene80892.t1 AT5G03610 25.281 356 214 13 7 334 8 339 5.32e-26 107
MS.gene80892.t1 AT1G67830 28.775 351 200 14 33 349 34 368 1.04e-25 106
MS.gene80892.t1 AT5G45910 28.940 349 195 16 33 346 34 364 1.13e-25 106
MS.gene80892.t1 AT2G27360 29.640 361 208 17 28 359 32 375 1.24e-25 107
MS.gene80892.t1 AT1G28570 28.133 391 233 18 1 359 1 375 6.54e-25 104
MS.gene80892.t1 AT1G54790 27.429 350 209 12 33 353 36 369 1.36e-24 103
MS.gene80892.t1 AT3G26430 26.705 352 211 10 33 353 35 370 2.33e-24 103
MS.gene80892.t1 AT1G28600 27.949 390 218 17 1 353 1 364 3.16e-24 102
MS.gene80892.t1 AT3G27950 28.152 341 201 10 33 347 36 358 4.63e-24 102
MS.gene80892.t1 AT4G01130 27.056 377 225 14 8 350 11 371 6.36e-24 102
MS.gene80892.t1 AT1G28610 27.778 378 222 16 1 346 1 359 8.46e-24 101
MS.gene80892.t1 AT1G28670 27.968 379 229 17 2 349 3 368 1.77e-23 100
MS.gene80892.t1 AT5G14450 26.879 346 204 12 33 346 45 373 3.58e-23 100
MS.gene80892.t1 AT1G31550 28.000 400 229 18 1 362 1 379 7.67e-23 99.0
MS.gene80892.t1 AT1G28580 29.143 350 204 17 28 349 36 369 1.36e-22 98.2
MS.gene80892.t1 AT4G16220 50.000 126 52 5 1 121 1 120 4.94e-22 94.0
MS.gene80892.t1 AT3G62280 27.381 336 207 11 33 350 40 356 5.81e-22 96.3
MS.gene80892.t1 AT1G28590 27.248 367 219 14 28 358 35 389 6.61e-22 96.7
MS.gene80892.t1 AT1G28650 27.273 374 230 16 1 346 7 366 6.86e-21 93.2
MS.gene80892.t1 AT1G28640 26.842 380 231 18 2 349 3 367 1.29e-20 92.8
MS.gene80892.t1 AT1G54020 24.702 336 228 8 30 361 34 348 1.59e-20 92.0
MS.gene80892.t1 AT1G54790 26.286 350 213 12 33 353 35 368 2.66e-20 91.7
MS.gene80892.t1 AT3G05180 26.100 341 213 11 33 346 40 368 5.74e-20 90.5
MS.gene80892.t1 AT1G54000 24.074 378 243 13 1 359 2 354 2.44e-19 89.0
MS.gene80892.t1 AT1G28660 28.460 383 220 19 2 349 3 366 2.59e-19 89.0
MS.gene80892.t1 AT1G56670 30.126 239 141 7 65 290 72 297 4.62e-19 87.0
MS.gene80892.t1 AT4G16233 32.540 126 84 1 238 362 5 130 1.27e-18 81.6
MS.gene80892.t1 AT3G14210 25.474 369 216 14 18 361 24 358 2.55e-18 85.9
MS.gene80892.t1 AT1G54030 28.631 241 146 10 28 265 51 268 2.77e-18 85.1
MS.gene80892.t1 AT5G03600 26.496 351 216 16 3 339 20 342 8.47e-18 84.0
MS.gene80892.t1 AT5G03600 27.077 325 197 16 26 339 12 307 2.34e-16 79.3
MS.gene80892.t1 AT4G01130 26.712 292 175 10 91 350 1 285 2.44e-16 79.0
MS.gene80892.t1 AT2G36325 24.260 338 213 13 27 348 45 355 6.93e-15 75.5
MS.gene80892.t1 AT3G62280 29.858 211 122 7 33 236 40 231 2.00e-12 67.8
MS.gene80892.t1 AT1G28600 31.390 223 105 13 1 199 1 199 1.19e-11 64.3
MS.gene80892.t1 AT1G28580 25.660 265 168 11 106 349 32 288 6.21e-11 63.2

Find 62 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAGACGTGTATGCATTT+TGG 0.247136 6.3:-14983235 MS.gene80892:CDS
AATTCCAGCTGAAGCAAAAT+TGG 0.255973 6.3:+14985149 None:intergenic
CAACTTGAAAACATGCTTCT+AGG 0.266917 6.3:-14983733 MS.gene80892:CDS
GTTACAGAAACTATATGATT+TGG 0.274074 6.3:-14983881 MS.gene80892:intron
CCAAGAACATTCTTAGTGTT+TGG 0.281405 6.3:-14986005 MS.gene80892:CDS
ATAAGATACTTGACATATTC+AGG 0.294015 6.3:+14984595 None:intergenic
CCAAACACTAAGAATGTTCT+TGG 0.305388 6.3:+14986005 None:intergenic
GGAGATTCACTTGTTGATAA+TGG 0.312652 6.3:-14985984 MS.gene80892:CDS
TGACGAGACCTTGCAGAATA+AGG 0.321945 6.3:+14984628 None:intergenic
TGATATTATGTCTGGCTCTA+AGG 0.324308 6.3:-14983168 MS.gene80892:CDS
CTTAATTCAGGGCTTAAGTA+TGG 0.326158 6.3:+14985195 None:intergenic
AGTAGGTTAAGTGCTCTTAT+TGG 0.359500 6.3:-14984739 MS.gene80892:CDS
AAGATAGTGCTAAGATTCAT+TGG 0.366536 6.3:+14983134 None:intergenic
ACATGCTTCTAGGACTTAAC+AGG 0.380135 6.3:-14983723 MS.gene80892:CDS
TTACAGAAACTATATGATTT+GGG 0.387755 6.3:-14983880 MS.gene80892:intron
AGAGTTCTTGTGACAGGAAC+AGG 0.398532 6.3:-14983850 MS.gene80892:CDS
CATAATCCAATACCATTGTT+AGG 0.403360 6.3:+14983284 None:intergenic
ATTGCTCAACGTGGTAGAAA+TGG 0.412791 6.3:-14983802 MS.gene80892:CDS
AGAGGAGAAAAGCTTCTAGT+TGG 0.427534 6.3:-14985174 MS.gene80892:CDS
ATTGTGAATGATATTATGTC+TGG 0.429709 6.3:-14983176 MS.gene80892:CDS
TAAGAGCACTTAACCTACTT+TGG 0.431627 6.3:+14984743 None:intergenic
TAAACTTAACTGATAAAATC+AGG 0.445628 6.3:+14985852 None:intergenic
CAAGGACCTAACAATGGTAT+TGG 0.445856 6.3:-14983290 MS.gene80892:CDS
TACTTAAGCCCTGAATTAAG+AGG 0.450132 6.3:-14985192 MS.gene80892:CDS
GTTGATAATCAATACCATAA+GGG 0.451249 6.3:+14985919 None:intergenic
CAACCATCTCATAGACCAAC+TGG 0.454129 6.3:-14985900 MS.gene80892:CDS
TAATGGAAATAACAATTACT+TGG 0.456317 6.3:-14985967 MS.gene80892:CDS
GACTTAACAGGAAACTTGGC+AGG 0.465462 6.3:-14983711 MS.gene80892:CDS
ATCAGGAATATTGTAGCCAT+TGG 0.467892 6.3:+14985869 None:intergenic
CTAGGACTTAACAGGAAACT+TGG 0.469763 6.3:-14983715 MS.gene80892:CDS
ATTAATAATCCCGGTCAATA+CGG 0.480874 6.3:-14983643 MS.gene80892:intron
TGTGACAGGAACAGGACCTA+TGG 0.480931 6.3:-14983842 MS.gene80892:CDS
TCTTAGCACTATCTTAGCAT+TGG 0.484703 6.3:-14983126 MS.gene80892:CDS
GGTTGATAATCAATACCATA+AGG 0.491148 6.3:+14985918 None:intergenic
TGCATTCCATCCATCTGAAA+AGG 0.494067 6.3:-14983210 MS.gene80892:CDS
CTTAACTTTATTAATAATCC+CGG 0.500065 6.3:-14983652 MS.gene80892:CDS
GGGCTTAAGTATGGCAATGT+TGG 0.506421 6.3:+14985204 None:intergenic
GTCTCTATTTGAGCACAAGT+TGG 0.508907 6.3:+14983250 None:intergenic
CACAAAATCATTGCCACCAA+CGG 0.525761 6.3:+14984669 None:intergenic
AGCGTGATTACCGTATTGAC+CGG 0.526253 6.3:+14983633 None:intergenic
CTTGTTCTCATAACCGTTGG+TGG 0.534126 6.3:-14984682 MS.gene80892:CDS
GCTAGAAGAGTTCTTGTGAC+AGG 0.550959 6.3:-14983856 MS.gene80892:CDS
AAAATAGCTTGTTGTGGACA+AGG 0.552118 6.3:-14983308 MS.gene80892:CDS
TTGATAATCAATACCATAAG+GGG 0.553672 6.3:+14985920 None:intergenic
GTGACAGGAACAGGACCTAT+GGG 0.561269 6.3:-14983841 MS.gene80892:CDS
CTACCAGTTGGTCTATGAGA+TGG 0.564585 6.3:+14985897 None:intergenic
ATTGGAATACTCAATGACAC+TGG 0.571915 6.3:-14985129 MS.gene80892:CDS
ACTTGGTGCCTTATTCTGCA+AGG 0.583391 6.3:-14984636 MS.gene80892:CDS
ACATCTAAAATAGCTTGTTG+TGG 0.584171 6.3:-14983314 MS.gene80892:CDS
GCACTTGTTCTCATAACCGT+TGG 0.594141 6.3:-14984685 MS.gene80892:CDS
GGGTGCATCAGCACGTGCAG+TGG 0.594910 6.3:+14985941 None:intergenic
CCACGTTGAGCAATTTCTGA+AGG 0.597567 6.3:+14983811 None:intergenic
ACTCTATCTTCGAATTCATG+TGG 0.630846 6.3:+14983097 None:intergenic
CCAACTGGTAGATTCTCCAA+TGG 0.638927 6.3:-14985885 MS.gene80892:CDS
TTGGAATACTCAATGACACT+GGG 0.640433 6.3:-14985128 MS.gene80892:CDS
GCGTGATTACCGTATTGACC+GGG 0.646524 6.3:+14983634 None:intergenic
CCATTGGAGAATCTACCAGT+TGG 0.651226 6.3:+14985885 None:intergenic
TCTGAAGGAACACAACCCAT+AGG 0.661508 6.3:+14983826 None:intergenic
ACTTAACAGGAAACTTGGCA+GGG 0.673315 6.3:-14983710 MS.gene80892:CDS
CCTTCAGAAATTGCTCAACG+TGG 0.676704 6.3:-14983811 MS.gene80892:CDS
TGATAATCAATACCATAAGG+GGG 0.707998 6.3:+14985921 None:intergenic
TGTGGACAAGGACCTAACAA+TGG 0.712232 6.3:-14983296 MS.gene80892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAATAAATAAAAAA+TGG - chr6.3:14984201-14984220 MS.gene80892:intron 0.0%
!! TATTAAGTAAAAATTAAAAC+CGG - chr6.3:14983599-14983618 MS.gene80892:intron 10.0%
!!! AAAAGTCAATAATTTTTTTT+TGG + chr6.3:14985069-14985088 None:intergenic 10.0%
!!! AAATGGTTTAAATATATTTT+AGG - chr6.3:14984218-14984237 MS.gene80892:intron 10.0%
!!! TAAATTTTTTATATATAGAC+CGG + chr6.3:14985806-14985825 None:intergenic 10.0%
!!! TTAAAATTTTAAAAAACAGA+AGG + chr6.3:14985136-14985155 None:intergenic 10.0%
!! ATGATTAGAGTATATAAAAT+TGG + chr6.3:14984132-14984151 None:intergenic 15.0%
!! TAAAACACATATTATTTGTT+TGG - chr6.3:14984859-14984878 MS.gene80892:intron 15.0%
!! TTCATTTGATTATACAAAAA+GGG + chr6.3:14983897-14983916 None:intergenic 15.0%
!!! AAATTAGTCATTGATTTATT+AGG + chr6.3:14985039-14985058 None:intergenic 15.0%
!!! AAATTTTTTATATATAGACC+GGG + chr6.3:14985805-14985824 None:intergenic 15.0%
!!! AATTAGTCATTGATTTATTA+GGG + chr6.3:14985038-14985057 None:intergenic 15.0%
!!! AATTTAAAGCAATAATTTGA+TGG - chr6.3:14984743-14984762 MS.gene80892:CDS 15.0%
!!! ATTATTTGTTTGGATTTTTT+AGG - chr6.3:14984869-14984888 MS.gene80892:intron 15.0%
!!! TTGATTAATATACATCTTTT+AGG - chr6.3:14984673-14984692 MS.gene80892:CDS 15.0%
!! AAATGAATGTTGAAACAAAA+GGG + chr6.3:14983416-14983435 None:intergenic 20.0%
!! CTTAACTTTATTAATAATCC+CGG - chr6.3:14985543-14985562 MS.gene80892:intron 20.0%
!! GTTCATTTGATTATACAAAA+AGG + chr6.3:14983898-14983917 None:intergenic 20.0%
!! TAAACTTAACTGATAAAATC+AGG + chr6.3:14983346-14983365 None:intergenic 20.0%
!! TAAATGAATGTTGAAACAAA+AGG + chr6.3:14983417-14983436 None:intergenic 20.0%
!! TAATGGAAATAACAATTACT+TGG - chr6.3:14983228-14983247 MS.gene80892:CDS 20.0%
!! TCAAAGAATTATCATTAAAG+AGG + chr6.3:14984657-14984676 None:intergenic 20.0%
!! TGAAAAACGAGAAAATTTAT+AGG + chr6.3:14984276-14984295 None:intergenic 20.0%
!! TTACAGAAACTATATGATTT+GGG - chr6.3:14985315-14985334 MS.gene80892:intron 20.0%
!! TTCAACATTCATTTATTTGA+AGG - chr6.3:14983422-14983441 MS.gene80892:intron 20.0%
!!! AAAAAGAGCTTTTTAAAGTA+GGG - chr6.3:14985090-14985109 MS.gene80892:intron 20.0%
!!! AAGAAATGAATGCTTTTTTT+AGG + chr6.3:14983838-14983857 None:intergenic 20.0%
!!! ATGACAAAAGATATGTTTTA+GGG - chr6.3:14985631-14985650 MS.gene80892:intron 20.0%
!!! ATTAGTCATTGATTTATTAG+GGG + chr6.3:14985037-14985056 None:intergenic 20.0%
!!! CTAACTAATTGAATTTTTTC+AGG - chr6.3:14983949-14983968 MS.gene80892:intron 20.0%
!!! TAATTATGTATTGGTGTTTA+AGG + chr6.3:14984187-14984206 None:intergenic 20.0%
!!! TATAAATTTTCTCGTTTTTC+AGG - chr6.3:14984275-14984294 MS.gene80892:intron 20.0%
!!! TTGCAGTGAATTTTTTTTTT+AGG + chr6.3:14984320-14984339 None:intergenic 20.0%
!!! TTTAGCAATGTTTTAAAAAC+CGG - chr6.3:14983490-14983509 MS.gene80892:intron 20.0%
!!! TTTTTTTAGGCAAAAAGAAA+TGG + chr6.3:14983825-14983844 None:intergenic 20.0%
! AGAATTGAATGTCTTTATCT+AGG - chr6.3:14984994-14985013 MS.gene80892:intron 25.0%
! AGATAAAGACATTCAATTCT+TGG + chr6.3:14984994-14985013 None:intergenic 25.0%
! ATAACTATGAGAAGTAACAT+AGG + chr6.3:14985288-14985307 None:intergenic 25.0%
! ATAAGATACTTGACATATTC+AGG + chr6.3:14984603-14984622 None:intergenic 25.0%
! ATTGTGAATGATATTATGTC+TGG - chr6.3:14986019-14986038 MS.gene80892:CDS 25.0%
! CAAATGTGAATGAAATTTGA+AGG + chr6.3:14983867-14983886 None:intergenic 25.0%
! GTTACAGAAACTATATGATT+TGG - chr6.3:14985314-14985333 MS.gene80892:intron 25.0%
! TAACCTATTGAACCATAAAT+CGG + chr6.3:14983687-14983706 None:intergenic 25.0%
!! ATTGCTTTAAATTCATGCTA+AGG + chr6.3:14984736-14984755 None:intergenic 25.0%
!! CATGACAAAAGATATGTTTT+AGG - chr6.3:14985630-14985649 MS.gene80892:intron 25.0%
!! TTGATAATCAATACCATAAG+GGG + chr6.3:14983278-14983297 None:intergenic 25.0%
!! TTTTGTCATGATAATTTCGA+CGG + chr6.3:14985620-14985639 None:intergenic 25.0%
!! TTTTGTGAATAACTACTACT+TGG - chr6.3:14984542-14984561 MS.gene80892:intron 25.0%
!!! ACTGCAAAATTTTAAAGTTG+AGG - chr6.3:14984333-14984352 MS.gene80892:intron 25.0%
!!! ATTTTAGATGTTTTGAAACC+TGG + chr6.3:14985872-14985891 None:intergenic 25.0%
!!! CAAAAAGAGCTTTTTAAAGT+AGG - chr6.3:14985089-14985108 MS.gene80892:intron 25.0%
!!! GTTGATAATCAATACCATAA+GGG + chr6.3:14983279-14983298 None:intergenic 25.0%
!!! TTATGCAGTGTTTTAAAACT+CGG - chr6.3:14985695-14985714 MS.gene80892:intron 25.0%
!!! TTGGAGGAATATTTTTTCAT+GGG - chr6.3:14983155-14983174 MS.gene80892:CDS 25.0%
AAATGGATGTTGTAACAAGA+AGG + chr6.3:14983808-14983827 None:intergenic 30.0%
AAGATAGTGCTAAGATTCAT+TGG + chr6.3:14986064-14986083 None:intergenic 30.0%
ATCAAATGAACATTGACACA+TGG - chr6.3:14983907-14983926 MS.gene80892:intron 30.0%
ATTAATAATCCCGGTCAATA+CGG - chr6.3:14985552-14985571 MS.gene80892:intron 30.0%
CAATCAATTGAACCAAAAAC+AGG + chr6.3:14983716-14983735 None:intergenic 30.0%
CAGTTCAATCACAGTTAAAT+CGG - chr6.3:14983564-14983583 MS.gene80892:intron 30.0%
CATAATCCAATACCATTGTT+AGG + chr6.3:14985914-14985933 None:intergenic 30.0%
GTACAACTAATCAAAAGCTT+AGG - chr6.3:14984695-14984714 MS.gene80892:CDS 30.0%
TGATAATCAATACCATAAGG+GGG + chr6.3:14983277-14983296 None:intergenic 30.0%
! AATAGAGTCGGTGATATTTT+AGG - chr6.3:14983519-14983538 MS.gene80892:intron 30.0%
! ATAGAGTCGGTGATATTTTA+GGG - chr6.3:14983520-14983539 MS.gene80892:intron 30.0%
! ATCAAACAAGTCAAGTCTTT+TGG - chr6.3:14985254-14985273 MS.gene80892:intron 30.0%
! TGACAACGTAGCTATAATTT+TGG + chr6.3:14985669-14985688 None:intergenic 30.0%
!! ACATCTAAAATAGCTTGTTG+TGG - chr6.3:14985881-14985900 MS.gene80892:CDS 30.0%
!! GGTTGATAATCAATACCATA+AGG + chr6.3:14983280-14983299 None:intergenic 30.0%
!! TTTTAGGGAAATGATGCAAT+TGG - chr6.3:14983535-14983554 MS.gene80892:intron 30.0%
!!! ATTTTCAAGAGTACCAAAGT+AGG - chr6.3:14984439-14984458 MS.gene80892:intron 30.0%
!!! ATTTTTTCAGGTCAGAAACT+CGG - chr6.3:14983961-14983980 MS.gene80892:intron 30.0%
!!! GCTTTGTTCATTTTAGTTGT+TGG - chr6.3:14983136-14983155 MS.gene80892:CDS 30.0%
!!! GTTGGAGGAATATTTTTTCA+TGG - chr6.3:14983154-14983173 MS.gene80892:CDS 30.0%
!!! TTGTTCATTTTAGTTGTTGG+AGG - chr6.3:14983139-14983158 MS.gene80892:CDS 30.0%
AACACAAGGATCAAACCAAT+CGG - chr6.3:14983653-14983672 MS.gene80892:CDS 35.0%
AACCGGAATGAAAATAGAGT+CGG - chr6.3:14983507-14983526 MS.gene80892:intron 35.0%
AATTCCAGCTGAAGCAAAAT+TGG + chr6.3:14984049-14984068 None:intergenic 35.0%
AGTAGGTTAAGTGCTCTTAT+TGG - chr6.3:14984456-14984475 MS.gene80892:intron 35.0%
ATAGGTACTAAAGCGAAAAG+CGG + chr6.3:14984258-14984277 None:intergenic 35.0%
ATCAGGAATATTGTAGCCAT+TGG + chr6.3:14983329-14983348 None:intergenic 35.0%
ATTGGAATACTCAATGACAC+TGG - chr6.3:14984066-14984085 MS.gene80892:intron 35.0%
CAACTTGAAAACATGCTTCT+AGG - chr6.3:14985462-14985481 MS.gene80892:intron 35.0%
CAATTGAACCAAAAACAGGT+CGG + chr6.3:14983712-14983731 None:intergenic 35.0%
CCAAACACTAAGAATGTTCT+TGG + chr6.3:14983193-14983212 None:intergenic 35.0%
CCAAGAACATTCTTAGTGTT+TGG - chr6.3:14983190-14983209 MS.gene80892:CDS 35.0%
CGAAAAGCGGTATATTTGTA+GGG + chr6.3:14984245-14984264 None:intergenic 35.0%
CTTAATTCAGGGCTTAAGTA+TGG + chr6.3:14984003-14984022 None:intergenic 35.0%
GAAGGCTCATTCAATATGTA+TGG + chr6.3:14983790-14983809 None:intergenic 35.0%
GAGGACTTATATTATGCACA+TGG - chr6.3:14984352-14984371 MS.gene80892:intron 35.0%
GTTCAATTGATTGAATCGAC+TGG - chr6.3:14983723-14983742 MS.gene80892:CDS 35.0%
GTTGAACAAGTTTCTTCAAC+CGG + chr6.3:14983621-14983640 None:intergenic 35.0%
TACTTAAGCCCTGAATTAAG+AGG - chr6.3:14984003-14984022 MS.gene80892:intron 35.0%
TCTTAGCACTATCTTAGCAT+TGG - chr6.3:14986069-14986088 MS.gene80892:CDS 35.0%
TTGGAATACTCAATGACACT+GGG - chr6.3:14984067-14984086 MS.gene80892:intron 35.0%
! AAATCGGCAAATTTTCCGAT+TGG + chr6.3:14983671-14983690 None:intergenic 35.0%
! AATTTTGCTTCAGCTGGAAT+TGG - chr6.3:14984048-14984067 MS.gene80892:intron 35.0%
! AGCTTTTCTCCTCTTAATTC+AGG + chr6.3:14984015-14984034 None:intergenic 35.0%
! ATAGAGACGTGTATGCATTT+TGG - chr6.3:14985960-14985979 MS.gene80892:CDS 35.0%
! ATTGATTGAATCGACTGGTT+CGG - chr6.3:14983728-14983747 MS.gene80892:CDS 35.0%
! GCTTTTCTCCTCTTAATTCA+GGG + chr6.3:14984014-14984033 None:intergenic 35.0%
! GGAGATTCACTTGTTGATAA+TGG - chr6.3:14983211-14983230 MS.gene80892:CDS 35.0%
! GTGTTACCTGCAAAAGTTTT+TGG + chr6.3:14984635-14984654 None:intergenic 35.0%
! GTTGAAGAAACTTGTTCAAC+TGG - chr6.3:14983621-14983640 MS.gene80892:intron 35.0%
! TAGAGACGTGTATGCATTTT+GGG - chr6.3:14985961-14985980 MS.gene80892:CDS 35.0%
! TGAGTACCAAAAACTTTTGC+AGG - chr6.3:14984626-14984645 MS.gene80892:CDS 35.0%
! TTTTCATTGCTGCAAACACT+GGG - chr6.3:14985511-14985530 MS.gene80892:intron 35.0%
!! AAAATAGCTTGTTGTGGACA+AGG - chr6.3:14985887-14985906 MS.gene80892:CDS 35.0%
!! TAAGAGCACTTAACCTACTT+TGG + chr6.3:14984455-14984474 None:intergenic 35.0%
!! TCGGAAAATTTGCCGATTTA+TGG - chr6.3:14983672-14983691 MS.gene80892:CDS 35.0%
!! TGATATTATGTCTGGCTCTA+AGG - chr6.3:14986027-14986046 MS.gene80892:CDS 35.0%
!! TTGCCGATTTATGGTTCAAT+AGG - chr6.3:14983681-14983700 MS.gene80892:CDS 35.0%
!! TTTATGTTGTTGCTTTGACC+AGG - chr6.3:14985851-14985870 MS.gene80892:intron 35.0%
!!! AGAAGCATGTTTTCAAGTTG+AGG + chr6.3:14985462-14985481 None:intergenic 35.0%
!!! GAAGCATGTTTTCAAGTTGA+GGG + chr6.3:14985461-14985480 None:intergenic 35.0%
ACTTAACAGGAAACTTGGCA+GGG - chr6.3:14985485-14985504 MS.gene80892:intron 40.0%
AGAGGAGAAAAGCTTCTAGT+TGG - chr6.3:14984021-14984040 MS.gene80892:intron 40.0%
ATTGCTCAACGTGGTAGAAA+TGG - chr6.3:14985393-14985412 MS.gene80892:intron 40.0%
CAAGGACCTAACAATGGTAT+TGG - chr6.3:14985905-14985924 MS.gene80892:CDS 40.0%
CACAAAATCATTGCCACCAA+CGG + chr6.3:14984529-14984548 None:intergenic 40.0%
CTAGGACTTAACAGGAAACT+TGG - chr6.3:14985480-14985499 MS.gene80892:intron 40.0%
GCGAAAAGCGGTATATTTGT+AGG + chr6.3:14984246-14984265 None:intergenic 40.0%
GTCTCTATTTGAGCACAAGT+TGG + chr6.3:14985948-14985967 None:intergenic 40.0%
TGCATTCCATCCATCTGAAA+AGG - chr6.3:14985985-14986004 MS.gene80892:CDS 40.0%
! ACTGGTTCAATGAGAACACA+AGG - chr6.3:14983639-14983658 MS.gene80892:intron 40.0%
! AGGTTAAACCGACCTGTTTT+TGG - chr6.3:14983701-14983720 MS.gene80892:CDS 40.0%
! GTTTTCATTGCTGCAAACAC+TGG - chr6.3:14985510-14985529 MS.gene80892:intron 40.0%
! TGTTTGCCTTTTCAGATGGA+TGG + chr6.3:14985994-14986013 None:intergenic 40.0%
!! ACATGCTTCTAGGACTTAAC+AGG - chr6.3:14985472-14985491 MS.gene80892:intron 40.0%
!! AGCTTGTTTGCCTTTTCAGA+TGG + chr6.3:14985998-14986017 None:intergenic 40.0%
!!! CACCGACTCTATTTTCATTC+CGG + chr6.3:14983512-14983531 None:intergenic 40.0%
ACCAATGATCGATCCGGTTA+AGG - chr6.3:14985718-14985737 MS.gene80892:intron 45.0%
AGAGTTCTTGTGACAGGAAC+AGG - chr6.3:14985345-14985364 MS.gene80892:intron 45.0%
CAACCATCTCATAGACCAAC+TGG - chr6.3:14983295-14983314 MS.gene80892:CDS 45.0%
CCAACTGGTAGATTCTCCAA+TGG - chr6.3:14983310-14983329 MS.gene80892:CDS 45.0%
CCACGTTGAGCAATTTCTGA+AGG + chr6.3:14985387-14985406 None:intergenic 45.0%
CCATTGGAGAATCTACCAGT+TGG + chr6.3:14983313-14983332 None:intergenic 45.0%
CCTTCAGAAATTGCTCAACG+TGG - chr6.3:14985384-14985403 MS.gene80892:intron 45.0%
CTTGTTCTCATAACCGTTGG+TGG - chr6.3:14984513-14984532 MS.gene80892:intron 45.0%
GACTTAACAGGAAACTTGGC+AGG - chr6.3:14985484-14985503 MS.gene80892:intron 45.0%
GCACTTGTTCTCATAACCGT+TGG - chr6.3:14984510-14984529 MS.gene80892:intron 45.0%
GCTAGAAGAGTTCTTGTGAC+AGG - chr6.3:14985339-14985358 MS.gene80892:intron 45.0%
GGGCTTAAGTATGGCAATGT+TGG + chr6.3:14983994-14984013 None:intergenic 45.0%
TCTGAAGGAACACAACCCAT+AGG + chr6.3:14985372-14985391 None:intergenic 45.0%
TGACGAGACCTTGCAGAATA+AGG + chr6.3:14984570-14984589 None:intergenic 45.0%
TGTGGACAAGGACCTAACAA+TGG - chr6.3:14985899-14985918 MS.gene80892:CDS 45.0%
! AGCGTGATTACCGTATTGAC+CGG + chr6.3:14985565-14985584 None:intergenic 45.0%
! CTACCAGTTGGTCTATGAGA+TGG + chr6.3:14983301-14983320 None:intergenic 45.0%
!! ACTTGGTGCCTTATTCTGCA+AGG - chr6.3:14984559-14984578 MS.gene80892:intron 45.0%
!!! TATTTATTTTAATTATGTAT+TGG + chr6.3:14984196-14984215 None:intergenic 5.0%
ACTCGGACCAATGATCGATC+CGG - chr6.3:14985712-14985731 MS.gene80892:intron 50.0%
AGACCGGGTTAACAGTCTTG+CGG + chr6.3:14985790-14985809 None:intergenic 50.0%
CCAGTGACTTAGGCCTTAAC+CGG + chr6.3:14985734-14985753 None:intergenic 50.0%
CGGTTAAGGCCTAAGTCACT+GGG - chr6.3:14985732-14985751 MS.gene80892:intron 50.0%
GACCAATGACCCAGTGACTT+AGG + chr6.3:14985744-14985763 None:intergenic 50.0%
GCCTTAACCGGATCGATCAT+TGG + chr6.3:14985722-14985741 None:intergenic 50.0%
GTGACAGGAACAGGACCTAT+GGG - chr6.3:14985354-14985373 MS.gene80892:intron 50.0%
TGTGACAGGAACAGGACCTA+TGG - chr6.3:14985353-14985372 MS.gene80892:intron 50.0%
! GCGTGATTACCGTATTGACC+GGG + chr6.3:14985564-14985583 None:intergenic 50.0%
! GGAGCCAATTTTGCTTCAGC+TGG - chr6.3:14984042-14984061 MS.gene80892:intron 50.0%
CAGACCAGTGGGTCAATGGT+CGG - chr6.3:14985763-14985782 MS.gene80892:intron 55.0%
CCGGTTAAGGCCTAAGTCAC+TGG - chr6.3:14985731-14985750 MS.gene80892:intron 55.0%
GGACCGCAAGACTGTTAACC+CGG - chr6.3:14985784-14985803 MS.gene80892:intron 55.0%
GGCCTAAGTCACTGGGTCAT+TGG - chr6.3:14985739-14985758 MS.gene80892:intron 55.0%
GGGTCATTGGTCAGACCAGT+GGG - chr6.3:14985752-14985771 MS.gene80892:intron 55.0%
TGGGTCATTGGTCAGACCAG+TGG - chr6.3:14985751-14985770 MS.gene80892:intron 55.0%
TGGTCAGACCAGTGGGTCAA+TGG - chr6.3:14985759-14985778 MS.gene80892:intron 55.0%
! CGTGCTGATGCACCCCCTTA+TGG - chr6.3:14983262-14983281 MS.gene80892:CDS 60.0%
CGGTCCGACCATTGACCCAC+TGG + chr6.3:14985770-14985789 None:intergenic 65.0%
GGGTGCATCAGCACGTGCAG+TGG + chr6.3:14983257-14983276 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 14983112 14986105 14983112 ID=MS.gene80892
chr6.3 mRNA 14983112 14986105 14983112 ID=MS.gene80892.t1;Parent=MS.gene80892
chr6.3 exon 14985862 14986105 14985862 ID=MS.gene80892.t1.exon1;Parent=MS.gene80892.t1
chr6.3 CDS 14985862 14986105 14985862 ID=cds.MS.gene80892.t1;Parent=MS.gene80892.t1
chr6.3 exon 14985119 14985246 14985119 ID=MS.gene80892.t1.exon2;Parent=MS.gene80892.t1
chr6.3 CDS 14985119 14985246 14985119 ID=cds.MS.gene80892.t1;Parent=MS.gene80892.t1
chr6.3 exon 14984570 14984812 14984570 ID=MS.gene80892.t1.exon3;Parent=MS.gene80892.t1
chr6.3 CDS 14984570 14984812 14984570 ID=cds.MS.gene80892.t1;Parent=MS.gene80892.t1
chr6.3 exon 14983644 14983896 14983644 ID=MS.gene80892.t1.exon4;Parent=MS.gene80892.t1
chr6.3 CDS 14983644 14983896 14983644 ID=cds.MS.gene80892.t1;Parent=MS.gene80892.t1
chr6.3 exon 14983112 14983344 14983112 ID=MS.gene80892.t1.exon5;Parent=MS.gene80892.t1
chr6.3 CDS 14983112 14983344 14983112 ID=cds.MS.gene80892.t1;Parent=MS.gene80892.t1
Gene Sequence

>MS.gene80892

ATGGCATCTTTGTCAAGTTTTTTTGCTTTGTTCATTTTAGTTGTTGGAGGAATATTTTTTCATGGGATTGAAGCTACTCCAAGAACATTCTTAGTGTTTGGAGATTCACTTGTTGATAATGGAAATAACAATTACTTGGCTACCACTGCACGTGCTGATGCACCCCCTTATGGTATTGATTATCAACCATCTCATAGACCAACTGGTAGATTCTCCAATGGCTACAATATTCCTGATTTTATCAGTTAAGTTTAATTTCATTTCATATCTTTTGATATATATATTGCAATATTTTGAGTTACCCTTTTGTTTCAACATTCATTTATTTGAAGGTTTAACTAGTTATAAGATGCATTTTTATTGTTTTTACTTTATAGTTTTAGCAATGTTTTAAAAACCGGAATGAAAATAGAGTCGGTGATATTTTAGGGAAATGATGCAATTGGTTCAATCAGTTCAATCACAGTTAAATCGGATGATAAAAAAATATTAAGTAAAAATTAAAACCGGTTGAAGAAACTTGTTCAACTGGTTCAATGAGAACACAAGGATCAAACCAATCGGAAAATTTGCCGATTTATGGTTCAATAGGTTAAACCGACCTGTTTTTGGTTCAATTGATTGAATCGACTGGTTCGGTCAGATTTTTAAAATATTGAATTCAAGTTTTCATATCCATACATATTGAATGAGCCTTCTTGTTACAACATCCATTTCTTTTTGCCTAAAAAAAGCATTCATTTCTTTTATAACCTTCAAATTTCATTCACATTTGATTTGAACCCTTTTTGTATAATCAAATGAACATTGACACATGGAGTTTATATGCATTTATATCTAACTAATTGAATTTTTTCAGGTCAGAAACTCGGTGCTGAGCCAACATTGCCATACTTAAGCCCTGAATTAAGAGGAGAAAAGCTTCTAGTTGGAGCCAATTTTGCTTCAGCTGGAATTGGAATACTCAATGACACTGGGATTCAATTTGTAAATTGATTCTTTTTCTAATTTCATTATCCAATTTTATATACTCTAATCATTCACGTCAATAATGCATGCTTAAAAGTCAAAACCTTAAACACCAATACATAATTAAAATAAATAAAAAATGGTTTAAATATATTTTAGGTCCCTACAAATATACCGCTTTTCGCTTTAGTACCTATAAATTTTCTCGTTTTTCAGGTGCTAAAAATATATTTAAACCTAAAAAAAAAATTCACTGCAAAATTTTAAAGTTGAGGACTTATATTATGCACATGGAAATGACTAATATAGATGCAAATTTTGCAGATAAATATCATAAGAATGTATAGACAATATGAGTATTTTCAAGAGTACCAAAGTAGGTTAAGTGCTCTTATTGGTGCATCACAAGCAAAGACTCGTGTGAATCAAGCACTTGTTCTCATAACCGTTGGTGGCAATGATTTTGTGAATAACTACTACTTGGTGCCTTATTCTGCAAGGTCTCGTCAATATCAATTACCTGAATATGTCAAGTATCTTATCTCTGAGTACCAAAAACTTTTGCAGGTAACACCTCTTTAATGATAATTCTTTGATTAATATACATCTTTTAGGTACAACTAATCAAAAGCTTAGGTTAACATCATAACAACCTTAGCATGAATTTAAAGCAATAATTTGATGGTACTTTTCATAAAAAATAAATTATTTTATAAAATATTTGAATTTTTGCTCAAAAAAATAAAATAAATTATTTTATAAAATATTTGAGTTTTTTTAAAACACATATTATTTGTTTGGATTTTTTAGGTTTTAAAATAAAGAAGAGTTTAATAAATGAAGTTAATACAACAACTTCTTTATTTTTAAAATTTTAAAAAACTAAAATAATTTTTAAAAAATAGTACATCCAAGAATTGAATGTCTTTATCTAGGTGTCTTTGACTATTGATCCCCTAATAAATCAATGACTAATTTTCTTGTACCAAAAAAAAATTATTGACTTTTCAAAAAGAGCTTTTTAAAGTAGGGACTGAAGTATTATTTTTTTTCCTTCTGTTTTTTAAAATTTTAAAATGAAAATAGATAATACATATTTCAAAAAATAGATTCTTTTTGACAAAATAAAAAAAACTATAATAATTTTTTTCAAAAATTTAAAATAAAAACACAATCAAACAAGTCAAGTCTTTTGGATAATATGCCTATGTTACTTCTCATAGTTATATATATGTTACAGAAACTATATGATTTGGGAGCTAGAAGAGTTCTTGTGACAGGAACAGGACCTATGGGTTGTGTTCCTTCAGAAATTGCTCAACGTGGTAGAAATGGACAATGTTCAACTGAACTACAAAGAGCTGCATCATTGTTTAACCCTCAACTTGAAAACATGCTTCTAGGACTTAACAGGAAACTTGGCAGGGATGTTTTCATTGCTGCAAACACTGGGAAAACACATCTTAACTTTATTAATAATCCCGGTCAATACGGTAATCACGCTAATCTTATATTCAAAGTTTTAAATTGCAGTTGCCGTCGAAATTATCATGACAAAAGATATGTTTTAGGGTTTCATCTGCGACCAAAATTATAGCTACGTTGTCATGTATCTTATGCAGTGTTTTAAAACTCGGACCAATGATCGATCCGGTTAAGGCCTAAGTCACTGGGTCATTGGTCAGACCAGTGGGTCAATGGTCGGACCGCAAGACTGTTAACCCGGTCTATATATAAAAAATTTAAAATATAAACTAATGATATTTATTATTTATGTTGTTGCTTTGACCAGGTTTCAAAACATCTAAAATAGCTTGTTGTGGACAAGGACCTAACAATGGTATTGGATTATGCACACAACTTTCCAACTTGTGCTCAAATAGAGACGTGTATGCATTTTGGGATGCATTCCATCCATCTGAAAAGGCAAACAAGCTTATTGTGAATGATATTATGTCTGGCTCTAAGGCTTACATGAATCCAATGAATCTTAGCACTATCTTAGCATTGGATGCTACCACATGA
Protein sequence

>MS.gene80892.t1

MASLSSFFALFILVVGGIFFHGIEATPRTFLVFGDSLVDNGNNNYLATTARADAPPYGIDYQPSHRPTGRFSNGYNIPDFISQKLGAEPTLPYLSPELRGEKLLVGANFASAGIGILNDTGIQFINIIRMYRQYEYFQEYQSRLSALIGASQAKTRVNQALVLITVGGNDFVNNYYLVPYSARSRQYQLPEYVKYLISEYQKLLQKLYDLGARRVLVTGTGPMGCVPSEIAQRGRNGQCSTELQRAASLFNPQLENMLLGLNRKLGRDVFIAANTGKTHLNFINNPGQYGFKTSKIACCGQGPNNGIGLCTQLSNLCSNRDVYAFWDAFHPSEKANKLIVNDIMSGSKAYMNPMNLSTILALDATT