Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81347.t1 | XP_024639157.1 | 64.3 | 540 | 133 | 3 | 14 | 499 | 2 | 535 | 5.80E-178 | 634 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81347.t1 | G7K4M4 | 63.4 | 544 | 135 | 3 | 14 | 499 | 2 | 539 | 2.7e-177 | 631.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene81347 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene81347 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene81347 | 0.808687 | 2.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81347.t1 | MTR_5g095400 | 60.958 | 543 | 148 | 6 | 15 | 499 | 3 | 539 | 0.0 | 622 |
| MS.gene81347.t1 | MTR_5g095430 | 54.529 | 541 | 172 | 11 | 22 | 499 | 1 | 530 | 0.0 | 533 |
| MS.gene81347.t1 | MTR_5g095330 | 84.698 | 281 | 36 | 1 | 219 | 499 | 1 | 274 | 1.64e-174 | 492 |
| MS.gene81347.t1 | MTR_8g009850 | 58.255 | 424 | 99 | 4 | 113 | 503 | 1 | 379 | 6.49e-160 | 459 |
| MS.gene81347.t1 | MTR_5g095310 | 73.846 | 260 | 63 | 2 | 22 | 280 | 1 | 256 | 2.53e-123 | 365 |
| MS.gene81347.t1 | MTR_5g095310 | 83.957 | 187 | 27 | 1 | 279 | 465 | 179 | 362 | 1.25e-108 | 328 |
| MS.gene81347.t1 | MTR_5g095270 | 73.864 | 176 | 46 | 0 | 295 | 470 | 2 | 177 | 7.03e-89 | 270 |
| MS.gene81347.t1 | MTR_5g095370 | 72.222 | 144 | 39 | 1 | 1 | 143 | 1 | 144 | 1.06e-63 | 207 |
| MS.gene81347.t1 | MTR_5g095360 | 71.296 | 108 | 22 | 2 | 48 | 154 | 1 | 100 | 2.43e-38 | 137 |
| MS.gene81347.t1 | MTR_4g027155 | 33.846 | 260 | 144 | 9 | 219 | 472 | 1 | 238 | 8.93e-31 | 123 |
| MS.gene81347.t1 | MTR_1g044605 | 33.784 | 222 | 126 | 7 | 261 | 474 | 43 | 251 | 2.21e-29 | 120 |
| MS.gene81347.t1 | MTR_6g088860 | 36.022 | 186 | 100 | 5 | 295 | 474 | 4 | 176 | 1.13e-28 | 114 |
| MS.gene81347.t1 | MTR_6g466450 | 36.022 | 186 | 100 | 5 | 295 | 474 | 4 | 176 | 1.13e-28 | 114 |
| MS.gene81347.t1 | MTR_8g056180 | 36.559 | 186 | 99 | 5 | 295 | 474 | 4 | 176 | 1.71e-27 | 113 |
| MS.gene81347.t1 | MTR_5g094950 | 40.761 | 184 | 65 | 7 | 1 | 143 | 1 | 181 | 7.95e-24 | 105 |
| MS.gene81347.t1 | MTR_5g094920 | 41.566 | 166 | 68 | 3 | 1 | 144 | 1 | 159 | 9.57e-24 | 105 |
| MS.gene81347.t1 | MTR_5g094850 | 44.516 | 155 | 68 | 3 | 4 | 143 | 2 | 153 | 1.31e-23 | 104 |
| MS.gene81347.t1 | MTR_5g094850 | 44.516 | 155 | 68 | 3 | 4 | 143 | 2 | 153 | 1.64e-23 | 103 |
| MS.gene81347.t1 | MTR_6g033460 | 28.283 | 297 | 185 | 10 | 221 | 500 | 8 | 293 | 3.09e-23 | 102 |
| MS.gene81347.t1 | MTR_5g079810 | 35.326 | 184 | 97 | 6 | 295 | 474 | 4 | 169 | 4.13e-22 | 97.8 |
| MS.gene81347.t1 | MTR_7g070630 | 35.135 | 185 | 100 | 4 | 293 | 474 | 80 | 247 | 9.95e-22 | 98.2 |
| MS.gene81347.t1 | MTR_5g094990 | 36.318 | 201 | 64 | 5 | 1 | 144 | 1 | 194 | 1.10e-21 | 98.2 |
| MS.gene81347.t1 | MTR_6g023550 | 30.500 | 200 | 122 | 4 | 259 | 457 | 137 | 320 | 1.20e-21 | 96.3 |
| MS.gene81347.t1 | MTR_5g094960 | 41.497 | 147 | 72 | 3 | 1 | 143 | 1 | 137 | 4.16e-21 | 96.7 |
| MS.gene81347.t1 | MTR_8g469580 | 27.313 | 227 | 145 | 7 | 275 | 494 | 75 | 288 | 1.14e-20 | 95.1 |
| MS.gene81347.t1 | MTR_0126s0010 | 30.968 | 155 | 97 | 3 | 343 | 494 | 19 | 166 | 7.78e-20 | 90.5 |
| MS.gene81347.t1 | MTR_5g039510 | 28.638 | 213 | 132 | 6 | 284 | 490 | 39 | 237 | 1.86e-18 | 88.2 |
| MS.gene81347.t1 | MTR_3g080720 | 28.947 | 228 | 118 | 9 | 258 | 474 | 51 | 245 | 1.66e-17 | 85.1 |
| MS.gene81347.t1 | MTR_6g463930 | 27.397 | 219 | 139 | 6 | 281 | 494 | 74 | 277 | 4.17e-17 | 84.0 |
| MS.gene81347.t1 | MTR_7g031160 | 27.615 | 239 | 154 | 9 | 216 | 447 | 6 | 232 | 2.50e-16 | 81.3 |
| MS.gene81347.t1 | MTR_5g034000 | 60.938 | 64 | 25 | 0 | 67 | 130 | 1 | 64 | 2.63e-15 | 72.8 |
| MS.gene81347.t1 | MTR_6g065960 | 33.582 | 134 | 82 | 2 | 328 | 458 | 70 | 199 | 5.84e-15 | 76.3 |
| MS.gene81347.t1 | MTR_3g455890 | 29.648 | 199 | 94 | 6 | 281 | 474 | 83 | 240 | 4.20e-14 | 74.7 |
| MS.gene81347.t1 | MTR_5g095050 | 31.429 | 175 | 85 | 4 | 1 | 143 | 1 | 172 | 2.25e-13 | 72.8 |
| MS.gene81347.t1 | MTR_5g454250 | 27.843 | 255 | 161 | 8 | 212 | 451 | 135 | 381 | 3.24e-13 | 72.4 |
| MS.gene81347.t1 | MTR_5g039515 | 28.652 | 178 | 112 | 5 | 301 | 474 | 1 | 167 | 3.98e-13 | 70.9 |
| MS.gene81347.t1 | MTR_5g095390 | 40.288 | 139 | 60 | 4 | 4 | 126 | 2 | 133 | 6.59e-13 | 70.5 |
| MS.gene81347.t1 | MTR_3g030280 | 28.322 | 286 | 177 | 12 | 223 | 489 | 15 | 291 | 2.47e-12 | 69.7 |
| MS.gene81347.t1 | MTR_2g083020 | 27.574 | 272 | 173 | 9 | 223 | 478 | 288 | 551 | 3.54e-12 | 69.3 |
| MS.gene81347.t1 | MTR_2g009940 | 27.737 | 274 | 170 | 10 | 223 | 478 | 94 | 357 | 7.82e-12 | 67.8 |
| MS.gene81347.t1 | MTR_7g024810 | 27.839 | 273 | 171 | 10 | 223 | 478 | 117 | 380 | 2.17e-11 | 66.6 |
| MS.gene81347.t1 | MTR_5g094910 | 36.316 | 190 | 50 | 8 | 1 | 144 | 1 | 165 | 4.94e-11 | 64.7 |
| MS.gene81347.t1 | MTR_6g014585 | 27.206 | 272 | 174 | 9 | 223 | 478 | 43 | 306 | 5.44e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 114 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACAACGCAGGTTCGATTT+TGG | 0.152734 | 5.2:+80305786 | None:intergenic |
| GTTCTTTGCAAATGCATATC+TGG | 0.205513 | 5.2:-80302801 | MS.gene81347:CDS |
| AGAGCACTATTCGAAGTTTC+TGG | 0.226886 | 5.2:-80302963 | MS.gene81347:CDS |
| AAAATTATCAATGGATTGTT+TGG | 0.246344 | 5.2:-80302692 | MS.gene81347:CDS |
| TTATAGTTCCCATCTTCTTT+AGG | 0.261328 | 5.2:+80302773 | None:intergenic |
| TTATGTCATTTAAGTTATAA+TGG | 0.279777 | 5.2:+80302208 | None:intergenic |
| AGGGTTGGGGTTGCCCATTT+TGG | 0.308578 | 5.2:-80304353 | MS.gene81347:CDS |
| GTACAAATTCTCAGATATTC+AGG | 0.317285 | 5.2:-80302897 | MS.gene81347:CDS |
| CATTGACTGGTTCGCCCTTA+AGG | 0.319854 | 5.2:+80302411 | None:intergenic |
| TAGAGGGTTCACGTCCAAAA+TGG | 0.327794 | 5.2:+80304339 | None:intergenic |
| CTTCCTAACCCAATCGGCCT+CGG | 0.330220 | 5.2:+80302577 | None:intergenic |
| CTTGATAACTGCAATCCTTA+AGG | 0.357132 | 5.2:-80302426 | MS.gene81347:CDS |
| GTTTCCTAGCAAATGACCTT+CGG | 0.361574 | 5.2:-80302382 | MS.gene81347:CDS |
| AAGAAAGAAGAATAATGAAT+TGG | 0.367091 | 5.2:-80305449 | MS.gene81347:CDS |
| CTTGGAAGACATGAGCATTC+AGG | 0.367632 | 5.2:-80305746 | MS.gene81347:CDS |
| TCTTCAAGAGAAGTTTGAAT+TGG | 0.370237 | 5.2:-80305620 | MS.gene81347:CDS |
| ATGCTTTAGCAGTGGGTGTC+AGG | 0.376463 | 5.2:+80302519 | None:intergenic |
| GTGCAGGCCCGAGGCCGATT+GGG | 0.381424 | 5.2:-80302585 | MS.gene81347:CDS |
| TGTGCAGGCCCGAGGCCGAT+TGG | 0.385248 | 5.2:-80302586 | MS.gene81347:CDS |
| GAGCATTCAGGAACTTGTTT+CGG | 0.395229 | 5.2:-80305734 | MS.gene81347:CDS |
| CCTCTATTACCTCTTTATGT+AGG | 0.400563 | 5.2:-80304322 | MS.gene81347:CDS |
| AAATTATCAATGGATTGTTT+GGG | 0.400666 | 5.2:-80302691 | MS.gene81347:CDS |
| TTGATAACTGCAATCCTTAA+GGG | 0.407477 | 5.2:-80302425 | MS.gene81347:CDS |
| GGGATCTAACATTGATCATC+AGG | 0.407482 | 5.2:-80302624 | MS.gene81347:CDS |
| CGGTGTCGCGTACAGCGTTT+CGG | 0.412285 | 5.2:-80305714 | MS.gene81347:CDS |
| TCTATCCATTTCACGGTGAC+TGG | 0.412297 | 5.2:+80302239 | None:intergenic |
| TTCACGGTGACTGGTCTAGA+TGG | 0.418534 | 5.2:+80302248 | None:intergenic |
| CTAGACCAGTCACCGTGAAA+TGG | 0.419439 | 5.2:-80302244 | MS.gene81347:CDS |
| ATCTTTCTTCCTAACCCAAT+CGG | 0.420963 | 5.2:+80302571 | None:intergenic |
| ACAGTTTGATGAACTTGAAA+AGG | 0.422370 | 5.2:-80305686 | MS.gene81347:CDS |
| AAGAAAACTAGTTTAGTTGA+AGG | 0.432212 | 5.2:-80305490 | MS.gene81347:CDS |
| CTTAAGGATTGCAGTTATCA+AGG | 0.437445 | 5.2:+80302427 | None:intergenic |
| TTTCCTAGCAAATGACCTTC+GGG | 0.437545 | 5.2:-80302381 | MS.gene81347:CDS |
| GGCCCGAGGCCGATTGGGTT+AGG | 0.439711 | 5.2:-80302580 | MS.gene81347:CDS |
| AGGAAACGGCCGACATTGAC+TGG | 0.441613 | 5.2:+80302398 | None:intergenic |
| TTTCATGAGAAAATTATCAA+TGG | 0.445312 | 5.2:-80302701 | MS.gene81347:CDS |
| ATGATCAATGTTAGATCCCT+TGG | 0.447829 | 5.2:+80302628 | None:intergenic |
| TTCCTAACCCAATCGGCCTC+GGG | 0.448443 | 5.2:+80302578 | None:intergenic |
| AGAATTTGTACCCTTCCAAC+TGG | 0.450224 | 5.2:+80302909 | None:intergenic |
| CTGGGTCCTCCTAAAGAAGA+TGG | 0.457044 | 5.2:-80302782 | MS.gene81347:CDS |
| ACTTCGAATAGTGCTCTTGA+TGG | 0.457825 | 5.2:+80302969 | None:intergenic |
| GAACTAAAAGAGCTAGGGTT+GGG | 0.458419 | 5.2:-80304367 | MS.gene81347:CDS |
| AGAGGGTTCACGTCCAAAAT+GGG | 0.465355 | 5.2:+80304340 | None:intergenic |
| GAAGAATAATGAATTGGAGT+TGG | 0.472786 | 5.2:-80305443 | MS.gene81347:CDS |
| CCTACATAAAGAGGTAATAG+AGG | 0.474454 | 5.2:+80304322 | None:intergenic |
| TCTTGCCGCTCATCTACTAT+AGG | 0.475363 | 5.2:+80304278 | None:intergenic |
| TTAGTTGAAGGAGACATTGT+TGG | 0.478274 | 5.2:-80305478 | MS.gene81347:CDS |
| ATGATAGTGACCAGAGGATG+GGG | 0.479141 | 5.2:-80302872 | MS.gene81347:CDS |
| GTGTTCATTTGAAGCAAGAA+AGG | 0.479787 | 5.2:-80302651 | MS.gene81347:CDS |
| CTCTATTACCTCTTTATGTA+GGG | 0.480394 | 5.2:-80304321 | MS.gene81347:CDS |
| TTATCAAGGTTGCTTTCTGA+AGG | 0.485245 | 5.2:+80302441 | None:intergenic |
| TTCAAGCTGAAGAAGATTTG+AGG | 0.489086 | 5.2:-80305582 | MS.gene81347:CDS |
| GATCAACAAGCTTTGTGAAA+GGG | 0.494192 | 5.2:-80302309 | MS.gene81347:CDS |
| TTCTTTGCAAATGCATATCT+GGG | 0.497315 | 5.2:-80302800 | MS.gene81347:CDS |
| CATCATACCTGCACGTCTGA+TGG | 0.501556 | 5.2:+80304197 | None:intergenic |
| TAGTTCCCATCTTCTTTAGG+AGG | 0.502708 | 5.2:+80302776 | None:intergenic |
| AACTATGCGAAAGAGGGAAA+AGG | 0.504170 | 5.2:-80305549 | MS.gene81347:CDS |
| AATGATAGTGACCAGAGGAT+GGG | 0.506204 | 5.2:-80302873 | MS.gene81347:CDS |
| TCTGACAACATTTGCAAAAG+AGG | 0.509268 | 5.2:-80302846 | MS.gene81347:CDS |
| GCTCAAGGTGAATCATCATC+TGG | 0.509285 | 5.2:-80305367 | MS.gene81347:intron |
| GAGTAATTACGAAACATTGT+TGG | 0.516323 | 5.2:-80305521 | MS.gene81347:CDS |
| TGCACGCTCCCTACATAAAG+AGG | 0.520005 | 5.2:+80304313 | None:intergenic |
| GAAGGTCATTTGCTAGGAAA+CGG | 0.522688 | 5.2:+80302384 | None:intergenic |
| CGGCACGAACTAAAAGAGCT+AGG | 0.525867 | 5.2:-80304373 | MS.gene81347:CDS |
| CAATGATAGTGACCAGAGGA+TGG | 0.529533 | 5.2:-80302874 | MS.gene81347:CDS |
| GAGAGGAACTATGCGAAAGA+GGG | 0.529712 | 5.2:-80305555 | MS.gene81347:CDS |
| ATCAAGGTTGCTTTCTGAAG+GGG | 0.531107 | 5.2:+80302443 | None:intergenic |
| AACTAAAAGAGCTAGGGTTG+GGG | 0.531167 | 5.2:-80304366 | MS.gene81347:CDS |
| AACAGTTCGCTGCGGCCCGA+AGG | 0.532495 | 5.2:+80302366 | None:intergenic |
| AGAGAGGAACTATGCGAAAG+AGG | 0.532815 | 5.2:-80305556 | MS.gene81347:CDS |
| ATTTGAAGCAAGAAAGGCCA+AGG | 0.533782 | 5.2:-80302645 | MS.gene81347:CDS |
| ACAAGCTTTGTGAAAGGGTG+AGG | 0.542004 | 5.2:-80302304 | MS.gene81347:CDS |
| TGAGAAAGTTGAAGCGAAAG+TGG | 0.545305 | 5.2:-80305408 | MS.gene81347:CDS |
| GCATGGTTTATGTAGCTTGT+GGG | 0.546630 | 5.2:+80302338 | None:intergenic |
| CGGCCCGAAGGTCATTTGCT+AGG | 0.557590 | 5.2:+80302378 | None:intergenic |
| ACTATGCGAAAGAGGGAAAA+GGG | 0.558476 | 5.2:-80305548 | MS.gene81347:CDS |
| AGATTCTTAGTACTCTGTGC+AGG | 0.562380 | 5.2:-80302601 | MS.gene81347:CDS |
| TGTCCCTCCATCAGACGTGC+AGG | 0.562640 | 5.2:-80304204 | MS.gene81347:intron |
| TGATCAACAAGCTTTGTGAA+AGG | 0.564096 | 5.2:-80302310 | MS.gene81347:CDS |
| TATCAAGGTTGCTTTCTGAA+GGG | 0.569374 | 5.2:+80302442 | None:intergenic |
| TAGTACTCTGTGCAGGCCCG+AGG | 0.571519 | 5.2:-80302594 | MS.gene81347:CDS |
| TTGAATTGGAGAGACTAATG+AGG | 0.577255 | 5.2:-80305606 | MS.gene81347:CDS |
| GATTGGGTTAGGAAGAAAGA+TGG | 0.578358 | 5.2:-80302569 | MS.gene81347:CDS |
| TGGGTCCTCCTAAAGAAGAT+GGG | 0.581164 | 5.2:-80302781 | MS.gene81347:CDS |
| CACATTTGAACACGGAAGCA+AGG | 0.582698 | 5.2:+80302475 | None:intergenic |
| TAATTACGAAACATTGTTGG+AGG | 0.582866 | 5.2:-80305518 | MS.gene81347:CDS |
| GACACCCACTGCTAAAGCAT+GGG | 0.585381 | 5.2:-80302516 | MS.gene81347:CDS |
| TGACACCCACTGCTAAAGCA+TGG | 0.585774 | 5.2:-80302517 | MS.gene81347:CDS |
| GATGTACCCTGAAAAGAATG+AGG | 0.588375 | 5.2:-80302282 | MS.gene81347:CDS |
| CATACCTGCACGTCTGATGG+AGG | 0.590917 | 5.2:+80304200 | None:intergenic |
| CGAACTAAAAGAGCTAGGGT+TGG | 0.592003 | 5.2:-80304368 | MS.gene81347:CDS |
| AAAGTTGAAGCGAAAGTGGT+TGG | 0.594562 | 5.2:-80305404 | MS.gene81347:CDS |
| CTACATAAAGAGGTAATAGA+GGG | 0.601936 | 5.2:+80304323 | None:intergenic |
| GGAACTAGATGAGACGTTGG+TGG | 0.604691 | 5.2:+80303021 | None:intergenic |
| AGAAGATTTGAGGAAAAGAG+AGG | 0.614227 | 5.2:-80305572 | MS.gene81347:CDS |
| GGCACGAACTAAAAGAGCTA+GGG | 0.614763 | 5.2:-80304372 | MS.gene81347:CDS |
| GCTTGTTGATCAATGATGCA+TGG | 0.616686 | 5.2:+80302321 | None:intergenic |
| TGCATGGTTTATGTAGCTTG+TGG | 0.616762 | 5.2:+80302337 | None:intergenic |
| TGACAACGTTCATATCTCAC+AGG | 0.621939 | 5.2:-80304252 | MS.gene81347:CDS |
| GTTGCCCATGCTTTAGCAGT+GGG | 0.624509 | 5.2:+80302512 | None:intergenic |
| GATAGTGACCAGAGGATGGG+GGG | 0.629982 | 5.2:-80302870 | MS.gene81347:CDS |
| ATACCTGCACGTCTGATGGA+GGG | 0.632758 | 5.2:+80304201 | None:intergenic |
| GATGATAGCAATGCTGCTCA+AGG | 0.637953 | 5.2:-80305382 | MS.gene81347:CDS |
| TGATAGTGACCAGAGGATGG+GGG | 0.647620 | 5.2:-80302871 | MS.gene81347:CDS |
| TGGTCATTCGAAGACAACGC+AGG | 0.650023 | 5.2:+80305775 | None:intergenic |
| TGTTGCCCATGCTTTAGCAG+TGG | 0.654029 | 5.2:+80302511 | None:intergenic |
| TTTGAAGCAAGAAAGGCCAA+GGG | 0.664841 | 5.2:-80302644 | MS.gene81347:CDS |
| AAGGGCGAACCAGTCAATGT+CGG | 0.669594 | 5.2:-80302407 | MS.gene81347:CDS |
| AAAGGAACTAGATGAGACGT+TGG | 0.686332 | 5.2:+80303018 | None:intergenic |
| AAGTCTGACACATTTGAACA+CGG | 0.704591 | 5.2:+80302467 | None:intergenic |
| CAACGTTCATATCTCACAGG+AGG | 0.705255 | 5.2:-80304249 | MS.gene81347:CDS |
| CAGGCAATGATAGTGACCAG+AGG | 0.712647 | 5.2:-80302878 | MS.gene81347:CDS |
| ATGCACCTATAGTAGATGAG+CGG | 0.720441 | 5.2:-80304283 | MS.gene81347:CDS |
| GGGAGAAGAACAGTTCGCTG+CGG | 0.724708 | 5.2:+80302358 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATATATTTCTTATCA+GGG | - | chr5.2:80303619-80303638 | MS.gene81347:intron | 10.0% |
| !!! | TAAGTTATGTTTTAAAAAAT+GGG | - | chr5.2:80304713-80304732 | MS.gene81347:intron | 10.0% |
| !! | CAATTAATATATTTCTTATC+AGG | - | chr5.2:80303618-80303637 | MS.gene81347:intron | 15.0% |
| !! | TATTCAAAATGTAATTCATT+AGG | + | chr5.2:80303541-80303560 | None:intergenic | 15.0% |
| !!! | AAATTATGATTTTGAGTAAT+GGG | + | chr5.2:80303029-80303048 | None:intergenic | 15.0% |
| !!! | GTAAGTTATGTTTTAAAAAA+TGG | - | chr5.2:80304712-80304731 | MS.gene81347:intron | 15.0% |
| !!! | TAATGAATTACATTTTGAAT+AGG | - | chr5.2:80303540-80303559 | MS.gene81347:intron | 15.0% |
| !!! | TTTATTTGAGTTTTTGTTTT+GGG | - | chr5.2:80304257-80304276 | MS.gene81347:CDS | 15.0% |
| !!! | TTTTATTTGAGTTTTTGTTT+TGG | - | chr5.2:80304256-80304275 | MS.gene81347:CDS | 15.0% |
| !! | AAACAAAGCAAAGATAAAAA+AGG | - | chr5.2:80304969-80304988 | MS.gene81347:intron | 20.0% |
| !! | AAGAAAGAAGAATAATGAAT+TGG | - | chr5.2:80302567-80302586 | MS.gene81347:CDS | 20.0% |
| !! | ACATAAATTCATTTAGCATT+AGG | - | chr5.2:80303233-80303252 | MS.gene81347:intron | 20.0% |
| !! | AGATTCAAATCAAATACATA+AGG | - | chr5.2:80303398-80303417 | MS.gene81347:intron | 20.0% |
| !! | CAACTTGATATATAAATTCA+TGG | + | chr5.2:80302855-80302874 | None:intergenic | 20.0% |
| !! | TAAAACATAACTTACTAACT+TGG | + | chr5.2:80304707-80304726 | None:intergenic | 20.0% |
| !! | TAAATTTCTTCAATTCACTA+GGG | + | chr5.2:80303889-80303908 | None:intergenic | 20.0% |
| !! | TAAGTTTATTCCAATTTCTA+TGG | - | chr5.2:80304486-80304505 | MS.gene81347:intron | 20.0% |
| !! | TTAATCATTGTTGAATTTGT+TGG | - | chr5.2:80304758-80304777 | MS.gene81347:intron | 20.0% |
| !! | TTCAAAAAGAATAGTATATG+AGG | - | chr5.2:80304640-80304659 | MS.gene81347:intron | 20.0% |
| !! | TTTCATGAGAAAATTATCAA+TGG | - | chr5.2:80305315-80305334 | MS.gene81347:intron | 20.0% |
| !!! | AAAATTATCAATGGATTGTT+TGG | - | chr5.2:80305324-80305343 | MS.gene81347:intron | 20.0% |
| !!! | AAATTATCAATGGATTGTTT+GGG | - | chr5.2:80305325-80305344 | MS.gene81347:intron | 20.0% |
| !!! | ATGAGTTAATTACATTTTAC+AGG | + | chr5.2:80303923-80303942 | None:intergenic | 20.0% |
| !!! | ATGATTTATGATTTGTAGTT+GGG | + | chr5.2:80303303-80303322 | None:intergenic | 20.0% |
| !!! | CAAATTATGATTTTGAGTAA+TGG | + | chr5.2:80303030-80303049 | None:intergenic | 20.0% |
| !!! | TAAGGTCAGAAATTTTAAAT+GGG | + | chr5.2:80303505-80303524 | None:intergenic | 20.0% |
| !!! | TAATCATTGTTGAATTTGTT+GGG | - | chr5.2:80304759-80304778 | MS.gene81347:intron | 20.0% |
| !!! | TATGTTTTAAAAAATGGGTA+GGG | - | chr5.2:80304718-80304737 | MS.gene81347:intron | 20.0% |
| !!! | TCAATTACATCTAGAATTAT+GGG | - | chr5.2:80303846-80303865 | MS.gene81347:intron | 20.0% |
| !!! | TGAGTTAATTACATTTTACA+GGG | + | chr5.2:80303922-80303941 | None:intergenic | 20.0% |
| !!! | TTAAGGTCAGAAATTTTAAA+TGG | + | chr5.2:80303506-80303525 | None:intergenic | 20.0% |
| !!! | TTATGTTTTAAAAAATGGGT+AGG | - | chr5.2:80304717-80304736 | MS.gene81347:intron | 20.0% |
| !!! | TTGATAATTTTCTCATGAAA+TGG | + | chr5.2:80305315-80305334 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTATTTGTGACT+AGG | - | chr5.2:80304839-80304858 | MS.gene81347:intron | 20.0% |
| !!! | TTTATTACCATTTTTCCTAA+TGG | - | chr5.2:80304510-80304529 | MS.gene81347:intron | 20.0% |
| !!! | TTTTTATCTTTGCTTTGTTT+TGG | + | chr5.2:80304969-80304988 | None:intergenic | 20.0% |
| ! | AAAAAAATTTCCAGTTGGAA+GGG | - | chr5.2:80305097-80305116 | MS.gene81347:intron | 25.0% |
| ! | AATATATTTCTTATCAGGGA+CGG | - | chr5.2:80303623-80303642 | MS.gene81347:intron | 25.0% |
| ! | AATTCAATACAAGTGATGAT+CGG | - | chr5.2:80302747-80302766 | MS.gene81347:CDS | 25.0% |
| ! | AGAGAAATCTGATAAAAAAG+AGG | + | chr5.2:80304461-80304480 | None:intergenic | 25.0% |
| ! | CAATATTTATAAAGCAGCAT+TGG | + | chr5.2:80302727-80302746 | None:intergenic | 25.0% |
| ! | CATTTAGCATTAGGTTATTA+TGG | - | chr5.2:80303242-80303261 | MS.gene81347:intron | 25.0% |
| ! | CTAAATTTCTTCAATTCACT+AGG | + | chr5.2:80303890-80303909 | None:intergenic | 25.0% |
| ! | GAATTGAAGAAATTTAGATG+TGG | - | chr5.2:80303893-80303912 | MS.gene81347:intron | 25.0% |
| ! | GGAAAAAATGCATAATATAC+AGG | + | chr5.2:80302706-80302725 | None:intergenic | 25.0% |
| ! | GGTAATAAATCCATAGAAAT+TGG | + | chr5.2:80304499-80304518 | None:intergenic | 25.0% |
| ! | GTCCAAAAATTATATTTCCA+TGG | + | chr5.2:80302805-80302824 | None:intergenic | 25.0% |
| ! | GTTAGAAAAAAATTTCCAGT+TGG | - | chr5.2:80305092-80305111 | MS.gene81347:intron | 25.0% |
| ! | TAAAAAAGAGGAAAAGAGAA+TGG | + | chr5.2:80304449-80304468 | None:intergenic | 25.0% |
| ! | TAGTTAGTCAATTGTTAGAA+GGG | + | chr5.2:80303183-80303202 | None:intergenic | 25.0% |
| ! | TATGAAGTGAAAAATGTCAA+AGG | + | chr5.2:80305019-80305038 | None:intergenic | 25.0% |
| ! | TGAATGAATGTATAATGTGT+TGG | - | chr5.2:80302878-80302897 | MS.gene81347:CDS | 25.0% |
| !! | AAGAAAACTAGTTTAGTTGA+AGG | - | chr5.2:80302526-80302545 | MS.gene81347:CDS | 25.0% |
| !! | CATTTTTCACTTCATATCAT+TGG | - | chr5.2:80305023-80305042 | MS.gene81347:intron | 25.0% |
| !! | CTCAATTACATCTAGAATTA+TGG | - | chr5.2:80303845-80303864 | MS.gene81347:intron | 25.0% |
| !! | GATGATTTATGATTTGTAGT+TGG | + | chr5.2:80303304-80303323 | None:intergenic | 25.0% |
| !! | TGATTTATGATTTGTAGTTG+GGG | + | chr5.2:80303302-80303321 | None:intergenic | 25.0% |
| !! | TGCCATGGAAATATAATTTT+TGG | - | chr5.2:80302800-80302819 | MS.gene81347:CDS | 25.0% |
| !! | TTCTAACACAAACTTTTTGT+TGG | + | chr5.2:80305079-80305098 | None:intergenic | 25.0% |
| !! | TTGATTTGAATCTCTTCTAT+AGG | + | chr5.2:80303391-80303410 | None:intergenic | 25.0% |
| !!! | ATATAATTTTTGGACCAATG+AGG | - | chr5.2:80302810-80302829 | MS.gene81347:CDS | 25.0% |
| !!! | TATAATTTTTGGACCAATGA+GGG | - | chr5.2:80302811-80302830 | MS.gene81347:CDS | 25.0% |
| !!! | TCAGAAGAGTTAAGTTTTAT+TGG | + | chr5.2:80305477-80305496 | None:intergenic | 25.0% |
| !!! | TGTTCTTTGTTTTGTTTGAT+AGG | + | chr5.2:80303216-80303235 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTATCCATTTCA+CGG | + | chr5.2:80305787-80305806 | None:intergenic | 25.0% |
| ACAGGTAGAATTTGAAAGAA+AGG | + | chr5.2:80302915-80302934 | None:intergenic | 30.0% | |
| ACAGTTTGATGAACTTGAAA+AGG | - | chr5.2:80302330-80302349 | MS.gene81347:CDS | 30.0% | |
| AGAATGAACTTCAAAAACTG+AGG | + | chr5.2:80304325-80304344 | None:intergenic | 30.0% | |
| ATAACTTACTAACTTGGTTG+TGG | + | chr5.2:80304701-80304720 | None:intergenic | 30.0% | |
| ATGAATGTATAATGTGTTGG+TGG | - | chr5.2:80302881-80302900 | MS.gene81347:CDS | 30.0% | |
| CTAAGAATAAATACCCTCAT+TGG | + | chr5.2:80302827-80302846 | None:intergenic | 30.0% | |
| CTACATAAAGAGGTAATAGA+GGG | + | chr5.2:80303696-80303715 | None:intergenic | 30.0% | |
| CTCTATTACCTCTTTATGTA+GGG | - | chr5.2:80303695-80303714 | MS.gene81347:intron | 30.0% | |
| GAAAAAAATTTCCAGTTGGA+AGG | - | chr5.2:80305096-80305115 | MS.gene81347:intron | 30.0% | |
| GAAGAATAATGAATTGGAGT+TGG | - | chr5.2:80302573-80302592 | MS.gene81347:CDS | 30.0% | |
| GAGTAATTACGAAACATTGT+TGG | - | chr5.2:80302495-80302514 | MS.gene81347:CDS | 30.0% | |
| GGGGATTTAATTCAGATTAA+AGG | + | chr5.2:80303283-80303302 | None:intergenic | 30.0% | |
| GTACAAATTCTCAGATATTC+AGG | - | chr5.2:80305119-80305138 | MS.gene81347:intron | 30.0% | |
| GTAGTTAGTCAATTGTTAGA+AGG | + | chr5.2:80303184-80303203 | None:intergenic | 30.0% | |
| TAATTACGAAACATTGTTGG+AGG | - | chr5.2:80302498-80302517 | MS.gene81347:CDS | 30.0% | |
| TCTCAAACCATTAGGAAAAA+TGG | + | chr5.2:80304520-80304539 | None:intergenic | 30.0% | |
| TCTTCAAGAGAAGTTTGAAT+TGG | - | chr5.2:80302396-80302415 | MS.gene81347:CDS | 30.0% | |
| TTAGGTAAGAACAAGCATTA+AGG | + | chr5.2:80303523-80303542 | None:intergenic | 30.0% | |
| TTATAGTTCCCATCTTCTTT+AGG | + | chr5.2:80305246-80305265 | None:intergenic | 30.0% | |
| TTCGAATGACCATAAAAACT+TGG | - | chr5.2:80302252-80302271 | MS.gene81347:CDS | 30.0% | |
| TTCTTTGCAAATGCATATCT+GGG | - | chr5.2:80305216-80305235 | MS.gene81347:intron | 30.0% | |
| ! | ACAATTTCCTCATTCTTTTC+AGG | + | chr5.2:80305744-80305763 | None:intergenic | 30.0% |
| ! | CAATTTCCTCATTCTTTTCA+GGG | + | chr5.2:80305743-80305762 | None:intergenic | 30.0% |
| ! | TCATGTCTTCCAAGTTTTTA+TGG | + | chr5.2:80302264-80302283 | None:intergenic | 30.0% |
| ! | TTGAGTAATGGGACTTAAAT+GGG | + | chr5.2:80303018-80303037 | None:intergenic | 30.0% |
| ! | TTGATAACTGCAATCCTTAA+GGG | - | chr5.2:80305591-80305610 | MS.gene81347:CDS | 30.0% |
| ! | TTTGAGTAATGGGACTTAAA+TGG | + | chr5.2:80303019-80303038 | None:intergenic | 30.0% |
| !! | TTTGGATGAGATTTTGATGT+TGG | - | chr5.2:80304582-80304601 | MS.gene81347:intron | 30.0% |
| !!! | AAATTCACTAGTTTTGTGAG+AGG | - | chr5.2:80305279-80305298 | MS.gene81347:intron | 30.0% |
| !!! | AATTCACTAGTTTTGTGAGA+GGG | - | chr5.2:80305280-80305299 | MS.gene81347:intron | 30.0% |
| !!! | ACTGTTTTTGTAGGAACAAA+TGG | - | chr5.2:80304939-80304958 | MS.gene81347:intron | 30.0% |
| !!! | TTGTTCTTGACTGTTTTTGT+AGG | - | chr5.2:80304930-80304949 | MS.gene81347:intron | 30.0% |
| AAGTCTGACACATTTGAACA+CGG | + | chr5.2:80305552-80305571 | None:intergenic | 35.0% | |
| AATTGCAAGTCATACTGAAC+TGG | - | chr5.2:80304059-80304078 | MS.gene81347:intron | 35.0% | |
| ACGTTGAAGGAGATTTAAGA+AGG | - | chr5.2:80303122-80303141 | MS.gene81347:intron | 35.0% | |
| ACTTCTAGACTGCATAAGAA+TGG | + | chr5.2:80303464-80303483 | None:intergenic | 35.0% | |
| AGAAGATTTGAGGAAAAGAG+AGG | - | chr5.2:80302444-80302463 | MS.gene81347:CDS | 35.0% | |
| ATAGGTCCTTGTTCTAACTT+TGG | - | chr5.2:80304894-80304913 | MS.gene81347:intron | 35.0% | |
| ATCTTTCTTCCTAACCCAAT+CGG | + | chr5.2:80305448-80305467 | None:intergenic | 35.0% | |
| ATGATCAATGTTAGATCCCT+TGG | + | chr5.2:80305391-80305410 | None:intergenic | 35.0% | |
| ATTGCAAGTCATACTGAACT+GGG | - | chr5.2:80304060-80304079 | MS.gene81347:intron | 35.0% | |
| CAAAATCTCATCCAAACTGT+GGG | + | chr5.2:80304578-80304597 | None:intergenic | 35.0% | |
| CCTACATAAAGAGGTAATAG+AGG | + | chr5.2:80303697-80303716 | None:intergenic | 35.0% | |
| CCTCTATTACCTCTTTATGT+AGG | - | chr5.2:80303694-80303713 | MS.gene81347:intron | 35.0% | |
| CTTAAGGATTGCAGTTATCA+AGG | + | chr5.2:80305592-80305611 | None:intergenic | 35.0% | |
| GATTAAAGGCTATCTTGTCT+AGG | + | chr5.2:80303269-80303288 | None:intergenic | 35.0% | |
| GTTATGCATCCAACTATTTC+AGG | - | chr5.2:80304670-80304689 | MS.gene81347:intron | 35.0% | |
| GTTCTTTGCAAATGCATATC+TGG | - | chr5.2:80305215-80305234 | MS.gene81347:intron | 35.0% | |
| TACACACAAATATTCACACG+CGG | + | chr5.2:80302948-80302967 | None:intergenic | 35.0% | |
| TAGCATCCAAAGTTAGAACA+AGG | + | chr5.2:80304903-80304922 | None:intergenic | 35.0% | |
| TCAAAATCTCATCCAAACTG+TGG | + | chr5.2:80304579-80304598 | None:intergenic | 35.0% | |
| TCTGACAACATTTGCAAAAG+AGG | - | chr5.2:80305170-80305189 | MS.gene81347:intron | 35.0% | |
| TGTGTGTAATTATGTCCCTT+TGG | - | chr5.2:80302960-80302979 | MS.gene81347:CDS | 35.0% | |
| TTAGTTGAAGGAGACATTGT+TGG | - | chr5.2:80302538-80302557 | MS.gene81347:CDS | 35.0% | |
| TTCAAGCTGAAGAAGATTTG+AGG | - | chr5.2:80302434-80302453 | MS.gene81347:CDS | 35.0% | |
| TTGAAGGAGATTTAAGAAGG+AGG | - | chr5.2:80303125-80303144 | MS.gene81347:intron | 35.0% | |
| TTGAATTGGAGAGACTAATG+AGG | - | chr5.2:80302410-80302429 | MS.gene81347:CDS | 35.0% | |
| ! | ATGTTGGTTGTCGTGATTAT+GGG | - | chr5.2:80304598-80304617 | MS.gene81347:intron | 35.0% |
| ! | CTTGATAACTGCAATCCTTA+AGG | - | chr5.2:80305590-80305609 | MS.gene81347:CDS | 35.0% |
| ! | GATCAACAAGCTTTGTGAAA+GGG | - | chr5.2:80305707-80305726 | MS.gene81347:CDS | 35.0% |
| ! | GTGTTCATTTGAAGCAAGAA+AGG | - | chr5.2:80305365-80305384 | MS.gene81347:intron | 35.0% |
| ! | TATCAAGGTTGCTTTCTGAA+GGG | + | chr5.2:80305577-80305596 | None:intergenic | 35.0% |
| ! | TGATCAACAAGCTTTGTGAA+AGG | - | chr5.2:80305706-80305725 | MS.gene81347:CDS | 35.0% |
| ! | TTATCAAGGTTGCTTTCTGA+AGG | + | chr5.2:80305578-80305597 | None:intergenic | 35.0% |
| !! | ATGGATTTTCATGAGTGTTG+TGG | + | chr5.2:80303445-80303464 | None:intergenic | 35.0% |
| !! | ATTTTCATGAGTGTTGTGGA+TGG | + | chr5.2:80303441-80303460 | None:intergenic | 35.0% |
| !! | TTTTCATGAGTGTTGTGGAT+GGG | + | chr5.2:80303440-80303459 | None:intergenic | 35.0% |
| !!! | TGAGTTTTTGTTTTGGGTGT+TGG | - | chr5.2:80304263-80304282 | MS.gene81347:CDS | 35.0% |
| AAAGGAACTAGATGAGACGT+TGG | + | chr5.2:80305001-80305020 | None:intergenic | 40.0% | |
| AAAGTTGAAGCGAAAGTGGT+TGG | - | chr5.2:80302612-80302631 | MS.gene81347:CDS | 40.0% | |
| AACTAAAAGAGCTAGGGTTG+GGG | - | chr5.2:80303650-80303669 | MS.gene81347:intron | 40.0% | |
| AACTATGCGAAAGAGGGAAA+AGG | - | chr5.2:80302467-80302486 | MS.gene81347:CDS | 40.0% | |
| AATGGGACTTAAATGGGAAC+AGG | + | chr5.2:80303012-80303031 | None:intergenic | 40.0% | |
| ACTAGGCATGCTTGTGTTAA+GGG | - | chr5.2:80304856-80304875 | MS.gene81347:intron | 40.0% | |
| ACTATGCGAAAGAGGGAAAA+GGG | - | chr5.2:80302468-80302487 | MS.gene81347:CDS | 40.0% | |
| ACTTCGAATAGTGCTCTTGA+TGG | + | chr5.2:80305050-80305069 | None:intergenic | 40.0% | |
| AGAATTTGTACCCTTCCAAC+TGG | + | chr5.2:80305110-80305129 | None:intergenic | 40.0% | |
| AGATTCTTAGTACTCTGTGC+AGG | - | chr5.2:80305415-80305434 | MS.gene81347:CDS | 40.0% | |
| ATGCACCTATAGTAGATGAG+CGG | - | chr5.2:80303733-80303752 | MS.gene81347:intron | 40.0% | |
| CTTTCAGCTCTCAAACCATT+AGG | + | chr5.2:80304528-80304547 | None:intergenic | 40.0% | |
| GAACTAAAAGAGCTAGGGTT+GGG | - | chr5.2:80303649-80303668 | MS.gene81347:intron | 40.0% | |
| GATGCACGAGTATGATGAAA+TGG | - | chr5.2:80304815-80304834 | MS.gene81347:intron | 40.0% | |
| GATGTACCCTGAAAAGAATG+AGG | - | chr5.2:80305734-80305753 | MS.gene81347:CDS | 40.0% | |
| GCATCCAACTATTTCAGGAA+AGG | - | chr5.2:80304675-80304694 | MS.gene81347:intron | 40.0% | |
| GGGATCTAACATTGATCATC+AGG | - | chr5.2:80305392-80305411 | MS.gene81347:CDS | 40.0% | |
| GTTTCCTAGCAAATGACCTT+CGG | - | chr5.2:80305634-80305653 | MS.gene81347:CDS | 40.0% | |
| TAGTTCCCATCTTCTTTAGG+AGG | + | chr5.2:80305243-80305262 | None:intergenic | 40.0% | |
| TAGTTTCCGGGAATCAAATC+CGG | + | chr5.2:80303153-80303172 | None:intergenic | 40.0% | |
| TGACAACGTTCATATCTCAC+AGG | - | chr5.2:80303764-80303783 | MS.gene81347:intron | 40.0% | |
| TGAGAAAGTTGAAGCGAAAG+TGG | - | chr5.2:80302608-80302627 | MS.gene81347:CDS | 40.0% | |
| TGCATGGTTTATGTAGCTTG+TGG | + | chr5.2:80305682-80305701 | None:intergenic | 40.0% | |
| TTCTACGACTCATCACTCTT+AGG | + | chr5.2:80303326-80303345 | None:intergenic | 40.0% | |
| TTGCAAGTCATACTGAACTG+GGG | - | chr5.2:80304061-80304080 | MS.gene81347:intron | 40.0% | |
| TTTCCTAGCAAATGACCTTC+GGG | - | chr5.2:80305635-80305654 | MS.gene81347:CDS | 40.0% | |
| TTTCTTTCCTTCCCACAGTT+TGG | - | chr5.2:80304564-80304583 | MS.gene81347:intron | 40.0% | |
| ! | AAGGGAGAATGTTAGTTTCC+GGG | + | chr5.2:80303165-80303184 | None:intergenic | 40.0% |
| ! | AATCGAACAAGTTGGACCAA+AGG | + | chr5.2:80302979-80302998 | None:intergenic | 40.0% |
| ! | AATGATAGTGACCAGAGGAT+GGG | - | chr5.2:80305143-80305162 | MS.gene81347:intron | 40.0% |
| ! | AGAGCACTATTCGAAGTTTC+TGG | - | chr5.2:80305053-80305072 | MS.gene81347:intron | 40.0% |
| ! | ATCAAGGTTGCTTTCTGAAG+GGG | + | chr5.2:80305576-80305595 | None:intergenic | 40.0% |
| ! | ATCGAACAAGTTGGACCAAA+GGG | + | chr5.2:80302978-80302997 | None:intergenic | 40.0% |
| ! | ATTTGAAGCAAGAAAGGCCA+AGG | - | chr5.2:80305371-80305390 | MS.gene81347:CDS | 40.0% |
| ! | GAAGGGAGAATGTTAGTTTC+CGG | + | chr5.2:80303166-80303185 | None:intergenic | 40.0% |
| ! | GAAGGTCATTTGCTAGGAAA+CGG | + | chr5.2:80305635-80305654 | None:intergenic | 40.0% |
| ! | GAGCATTCAGGAACTTGTTT+CGG | - | chr5.2:80302282-80302301 | MS.gene81347:CDS | 40.0% |
| ! | GATGTTGGTTGTCGTGATTA+TGG | - | chr5.2:80304597-80304616 | MS.gene81347:intron | 40.0% |
| ! | GATTGGGTTAGGAAGAAAGA+TGG | - | chr5.2:80305447-80305466 | MS.gene81347:CDS | 40.0% |
| ! | GCATGGTTTATGTAGCTTGT+GGG | + | chr5.2:80305681-80305700 | None:intergenic | 40.0% |
| ! | GCTTGTTGATCAATGATGCA+TGG | + | chr5.2:80305698-80305717 | None:intergenic | 40.0% |
| ! | TTTGAAGCAAGAAAGGCCAA+GGG | - | chr5.2:80305372-80305391 | MS.gene81347:CDS | 40.0% |
| ! | TTTGGTCCAACTTGTTCGAT+TGG | - | chr5.2:80302978-80302997 | MS.gene81347:CDS | 40.0% |
| !! | GATTTTTCGATAGCTTGCCA+TGG | - | chr5.2:80302785-80302804 | MS.gene81347:CDS | 40.0% |
| !! | TTACTTGTTCCGTACTGACT+TGG | - | chr5.2:80304153-80304172 | MS.gene81347:intron | 40.0% |
| !!! | TAGTTTTGTGAGAGGGAAGA+AGG | - | chr5.2:80305287-80305306 | MS.gene81347:intron | 40.0% |
| AGAGAATGGTTGTGCGACAT+TGG | + | chr5.2:80304435-80304454 | None:intergenic | 45.0% | |
| AGAGAGGAACTATGCGAAAG+AGG | - | chr5.2:80302460-80302479 | MS.gene81347:CDS | 45.0% | |
| AGAGGGTTCACGTCCAAAAT+GGG | + | chr5.2:80303679-80303698 | None:intergenic | 45.0% | |
| AGATAAACACTTCCCCGCAT+AGG | - | chr5.2:80303076-80303095 | MS.gene81347:intron | 45.0% | |
| AGGGTTTGCATAAGAGAGGA+AGG | + | chr5.2:80304370-80304389 | None:intergenic | 45.0% | |
| AGTTTCCGGGAATCAAATCC+GGG | + | chr5.2:80303152-80303171 | None:intergenic | 45.0% | |
| ATCTCATCCAAACTGTGGGA+AGG | + | chr5.2:80304574-80304593 | None:intergenic | 45.0% | |
| CAACGTTCATATCTCACAGG+AGG | - | chr5.2:80303767-80303786 | MS.gene81347:intron | 45.0% | |
| CAATCGCCAATCGAACAAGT+TGG | + | chr5.2:80302987-80303006 | None:intergenic | 45.0% | |
| CACATTTGAACACGGAAGCA+AGG | + | chr5.2:80305544-80305563 | None:intergenic | 45.0% | |
| CAGTTAAGCACTCCAGAATG+AGG | + | chr5.2:80304128-80304147 | None:intergenic | 45.0% | |
| CGAACTAAAAGAGCTAGGGT+TGG | - | chr5.2:80303648-80303667 | MS.gene81347:intron | 45.0% | |
| CTAGGCATGCTTGTGTTAAG+GGG | - | chr5.2:80304857-80304876 | MS.gene81347:intron | 45.0% | |
| CTTGGAAGACATGAGCATTC+AGG | - | chr5.2:80302270-80302289 | MS.gene81347:CDS | 45.0% | |
| GACTAGGCATGCTTGTGTTA+AGG | - | chr5.2:80304855-80304874 | MS.gene81347:intron | 45.0% | |
| GAGAAGGGTTTGCATAAGAG+AGG | + | chr5.2:80304374-80304393 | None:intergenic | 45.0% | |
| GAGAATGGTTGTGCGACATT+GGG | + | chr5.2:80304434-80304453 | None:intergenic | 45.0% | |
| GAGAGGAACTATGCGAAAGA+GGG | - | chr5.2:80302461-80302480 | MS.gene81347:CDS | 45.0% | |
| GAGATTTAAGAAGGAGGTCC+CGG | - | chr5.2:80303131-80303150 | MS.gene81347:intron | 45.0% | |
| GATGATAGCAATGCTGCTCA+AGG | - | chr5.2:80302634-80302653 | MS.gene81347:CDS | 45.0% | |
| GCTCAAGGTGAATCATCATC+TGG | - | chr5.2:80302649-80302668 | MS.gene81347:CDS | 45.0% | |
| GGCACGAACTAAAAGAGCTA+GGG | - | chr5.2:80303644-80303663 | MS.gene81347:intron | 45.0% | |
| GGGGATGGTTACTTGTTCAT+AGG | - | chr5.2:80304876-80304895 | MS.gene81347:intron | 45.0% | |
| GTGGCCTTTCCTGAAATAGT+TGG | + | chr5.2:80304682-80304701 | None:intergenic | 45.0% | |
| GTTGAGCTAAAGGACGTTGA+AGG | - | chr5.2:80303109-80303128 | MS.gene81347:intron | 45.0% | |
| GTTGTCGTGATTATGGGTAC+TGG | - | chr5.2:80304604-80304623 | MS.gene81347:intron | 45.0% | |
| TAGAGGGTTCACGTCCAAAA+TGG | + | chr5.2:80303680-80303699 | None:intergenic | 45.0% | |
| TAGCTCGGTTGTTGAGCTAA+AGG | - | chr5.2:80303099-80303118 | MS.gene81347:intron | 45.0% | |
| TCTATCCATTTCACGGTGAC+TGG | + | chr5.2:80305780-80305799 | None:intergenic | 45.0% | |
| TCTTGCCGCTCATCTACTAT+AGG | + | chr5.2:80303741-80303760 | None:intergenic | 45.0% | |
| TGGGTCCTCCTAAAGAAGAT+GGG | - | chr5.2:80305235-80305254 | MS.gene81347:intron | 45.0% | |
| TGTGCACTAAGCATGCAAAG+AGG | + | chr5.2:80304192-80304211 | None:intergenic | 45.0% | |
| ! | AAACGCTTTTGGCCTCATTC+TGG | - | chr5.2:80304113-80304132 | MS.gene81347:intron | 45.0% |
| ! | ACAAGCTTTGTGAAAGGGTG+AGG | - | chr5.2:80305712-80305731 | MS.gene81347:CDS | 45.0% |
| ! | AGACAACGCAGGTTCGATTT+TGG | + | chr5.2:80302233-80302252 | None:intergenic | 45.0% |
| ! | ATGATAGTGACCAGAGGATG+GGG | - | chr5.2:80305144-80305163 | MS.gene81347:intron | 45.0% |
| ! | CAACTTGTTCGATTGGCGAT+TGG | - | chr5.2:80302985-80303004 | MS.gene81347:CDS | 45.0% |
| ! | CAATGATAGTGACCAGAGGA+TGG | - | chr5.2:80305142-80305161 | MS.gene81347:intron | 45.0% |
| ! | GACAACGCAGGTTCGATTTT+GGG | + | chr5.2:80302232-80302251 | None:intergenic | 45.0% |
| !! | AGAATGAGGCCAAAAGCGTT+TGG | + | chr5.2:80304114-80304133 | None:intergenic | 45.0% |
| !! | AGTGTAGTTGGTGATTGAGG+TGG | - | chr5.2:80304231-80304250 | MS.gene81347:CDS | 45.0% |
| !! | TGCAGTGTAGTTGGTGATTG+AGG | - | chr5.2:80304228-80304247 | MS.gene81347:CDS | 45.0% |
| AACAACCGAGCTACCTATGC+GGG | + | chr5.2:80303092-80303111 | None:intergenic | 50.0% | |
| AAGGGCGAACCAGTCAATGT+CGG | - | chr5.2:80305609-80305628 | MS.gene81347:CDS | 50.0% | |
| ACACGCGGTATACACACTAC+AGG | + | chr5.2:80302933-80302952 | None:intergenic | 50.0% | |
| AGGTGGTCAGAATCTTTGCC+TGG | + | chr5.2:80304407-80304426 | None:intergenic | 50.0% | |
| ATACCTGCACGTCTGATGGA+GGG | + | chr5.2:80303818-80303837 | None:intergenic | 50.0% | |
| ATGCTTTAGCAGTGGGTGTC+AGG | + | chr5.2:80305500-80305519 | None:intergenic | 50.0% | |
| CAACAACCGAGCTACCTATG+CGG | + | chr5.2:80303093-80303112 | None:intergenic | 50.0% | |
| CAGAATCTTTGCCTGGGTTG+AGG | + | chr5.2:80304400-80304419 | None:intergenic | 50.0% | |
| CATCATACCTGCACGTCTGA+TGG | + | chr5.2:80303822-80303841 | None:intergenic | 50.0% | |
| CGGCACGAACTAAAAGAGCT+AGG | - | chr5.2:80303643-80303662 | MS.gene81347:intron | 50.0% | |
| CTAGACCAGTCACCGTGAAA+TGG | - | chr5.2:80305772-80305791 | MS.gene81347:CDS | 50.0% | |
| CTGGGTCCTCCTAAAGAAGA+TGG | - | chr5.2:80305234-80305253 | MS.gene81347:intron | 50.0% | |
| GACACCCACTGCTAAAGCAT+GGG | - | chr5.2:80305500-80305519 | MS.gene81347:CDS | 50.0% | |
| GCATGCTTGTGTTAAGGGGA+TGG | - | chr5.2:80304861-80304880 | MS.gene81347:intron | 50.0% | |
| GGAACTAGATGAGACGTTGG+TGG | + | chr5.2:80304998-80305017 | None:intergenic | 50.0% | |
| GGTGGTCAGAATCTTTGCCT+GGG | + | chr5.2:80304406-80304425 | None:intergenic | 50.0% | |
| GTTGCCCATGCTTTAGCAGT+GGG | + | chr5.2:80305507-80305526 | None:intergenic | 50.0% | |
| TGACACCCACTGCTAAAGCA+TGG | - | chr5.2:80305499-80305518 | MS.gene81347:CDS | 50.0% | |
| TGCACGCTCCCTACATAAAG+AGG | + | chr5.2:80303706-80303725 | None:intergenic | 50.0% | |
| TGCATGCTTAGTGCACATGC+TGG | - | chr5.2:80304195-80304214 | MS.gene81347:intron | 50.0% | |
| TGGTCATTCGAAGACAACGC+AGG | + | chr5.2:80302244-80302263 | None:intergenic | 50.0% | |
| TGTTGCCCATGCTTTAGCAG+TGG | + | chr5.2:80305508-80305527 | None:intergenic | 50.0% | |
| ! | AATCTTTGCCTGGGTTGAGG+AGG | + | chr5.2:80304397-80304416 | None:intergenic | 50.0% |
| ! | ATCTTTGCCTGGGTTGAGGA+GGG | + | chr5.2:80304396-80304415 | None:intergenic | 50.0% |
| ! | CAGGCAATGATAGTGACCAG+AGG | - | chr5.2:80305138-80305157 | MS.gene81347:intron | 50.0% |
| ! | TGATAGTGACCAGAGGATGG+GGG | - | chr5.2:80305145-80305164 | MS.gene81347:intron | 50.0% |
| !! | CATTGACTGGTTCGCCCTTA+AGG | + | chr5.2:80305608-80305627 | None:intergenic | 50.0% |
| !! | TGCAAAGAGGCACTCCAATG+CGG | + | chr5.2:80304179-80304198 | None:intergenic | 50.0% |
| !! | TTCACGGTGACTGGTCTAGA+TGG | + | chr5.2:80305771-80305790 | None:intergenic | 50.0% |
| ACAACCGAGCTACCTATGCG+GGG | + | chr5.2:80303091-80303110 | None:intergenic | 55.0% | |
| ACTTCCCCGCATAGGTAGCT+CGG | - | chr5.2:80303084-80303103 | MS.gene81347:intron | 55.0% | |
| AGGAAACGGCCGACATTGAC+TGG | + | chr5.2:80305621-80305640 | None:intergenic | 55.0% | |
| CATACCTGCACGTCTGATGG+AGG | + | chr5.2:80303819-80303838 | None:intergenic | 55.0% | |
| CCAATGCGGCCAAGTCAGTA+CGG | + | chr5.2:80304165-80304184 | None:intergenic | 55.0% | |
| CTTCCTAACCCAATCGGCCT+CGG | + | chr5.2:80305442-80305461 | None:intergenic | 55.0% | |
| GAGGTCCCGGATTTGATTCC+CGG | - | chr5.2:80303144-80303163 | MS.gene81347:intron | 55.0% | |
| GATAGTGACCAGAGGATGGG+GGG | - | chr5.2:80305146-80305165 | MS.gene81347:intron | 55.0% | |
| GGGAGAAGAACAGTTCGCTG+CGG | + | chr5.2:80305661-80305680 | None:intergenic | 55.0% | |
| GTTGTGCGACATTGGGCATG+AGG | + | chr5.2:80304427-80304446 | None:intergenic | 55.0% | |
| TTCCTAACCCAATCGGCCTC+GGG | + | chr5.2:80305441-80305460 | None:intergenic | 55.0% | |
| ! | AGGGTTGGGGTTGCCCATTT+TGG | - | chr5.2:80303663-80303682 | MS.gene81347:intron | 55.0% |
| ! | GGGCACGTTCCAAACGCTTT+TGG | - | chr5.2:80304102-80304121 | MS.gene81347:intron | 55.0% |
| !!! | TGTTTTGGGTGTTGGAGCGC+AGG | - | chr5.2:80304271-80304290 | MS.gene81347:CDS | 55.0% |
| CGCGCTGAGTGCAGTGTAGT+TGG | - | chr5.2:80304219-80304238 | MS.gene81347:CDS | 60.0% | |
| CGGCCCGAAGGTCATTTGCT+AGG | + | chr5.2:80305641-80305660 | None:intergenic | 60.0% | |
| GGCTTCCACCTGTGCGCTTA+GGG | - | chr5.2:80304082-80304101 | MS.gene81347:intron | 60.0% | |
| GTGCGACATTGGGCATGAGG+TGG | + | chr5.2:80304424-80304443 | None:intergenic | 60.0% | |
| TAGTACTCTGTGCAGGCCCG+AGG | - | chr5.2:80305422-80305441 | MS.gene81347:CDS | 60.0% | |
| TGTCAGATCCCCCCATCCTC+TGG | + | chr5.2:80305157-80305176 | None:intergenic | 60.0% | |
| TGTCCCTCCATCAGACGTGC+AGG | - | chr5.2:80303812-80303831 | MS.gene81347:intron | 60.0% | |
| ! | CCTGGGTTGAGGAGGGAGAA+GGG | + | chr5.2:80304389-80304408 | None:intergenic | 60.0% |
| !! | CCGTACTGACTTGGCCGCAT+TGG | - | chr5.2:80304162-80304181 | MS.gene81347:intron | 60.0% |
| !! | CGGTGTCGCGTACAGCGTTT+CGG | - | chr5.2:80302302-80302321 | MS.gene81347:CDS | 60.0% |
| !! | TTGGGTGTTGGAGCGCAGGA+GGG | - | chr5.2:80304275-80304294 | MS.gene81347:CDS | 60.0% |
| !! | TTTGGGTGTTGGAGCGCAGG+AGG | - | chr5.2:80304274-80304293 | MS.gene81347:CDS | 60.0% |
| AACAGTTCGCTGCGGCCCGA+AGG | + | chr5.2:80305653-80305672 | None:intergenic | 65.0% | |
| ACGTGCCCTAAGCGCACAGG+TGG | + | chr5.2:80304090-80304109 | None:intergenic | 65.0% | |
| CCCTTCTCCCTCCTCAACCC+AGG | - | chr5.2:80304386-80304405 | MS.gene81347:intron | 65.0% | |
| GGAACGTGCCCTAAGCGCAC+AGG | + | chr5.2:80304093-80304112 | None:intergenic | 65.0% | |
| GGGCTTCCACCTGTGCGCTT+AGG | - | chr5.2:80304081-80304100 | MS.gene81347:intron | 65.0% | |
| ! | GCCTGGGTTGAGGAGGGAGA+AGG | + | chr5.2:80304390-80304409 | None:intergenic | 65.0% |
| CGCGCTGGGGTTCTGCTGCA+TGG | - | chr5.2:80304299-80304318 | MS.gene81347:CDS | 70.0% | |
| GGCCCGAGGCCGATTGGGTT+AGG | - | chr5.2:80305436-80305455 | MS.gene81347:CDS | 70.0% | |
| GTGCAGGCCCGAGGCCGATT+GGG | - | chr5.2:80305431-80305450 | MS.gene81347:CDS | 70.0% | |
| TGTGCAGGCCCGAGGCCGAT+TGG | - | chr5.2:80305430-80305449 | MS.gene81347:CDS | 70.0% | |
| AGCGCAGGAGGGACGCGCTG+GGG | - | chr5.2:80304286-80304305 | MS.gene81347:CDS | 75.0% | |
| GAGCGCAGGAGGGACGCGCT+GGG | - | chr5.2:80304285-80304304 | MS.gene81347:CDS | 75.0% | |
| ! | GGAGCGCAGGAGGGACGCGC+TGG | - | chr5.2:80304284-80304303 | MS.gene81347:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 80302217 | 80305821 | 80302217 | ID=MS.gene81347 |
| chr5.2 | mRNA | 80302217 | 80305821 | 80302217 | ID=MS.gene81347.t1;Parent=MS.gene81347 |
| chr5.2 | exon | 80305368 | 80305821 | 80305368 | ID=MS.gene81347.t1.exon1;Parent=MS.gene81347.t1 |
| chr5.2 | CDS | 80305368 | 80305821 | 80305368 | ID=cds.MS.gene81347.t1;Parent=MS.gene81347.t1 |
| chr5.2 | exon | 80304205 | 80304398 | 80304205 | ID=MS.gene81347.t1.exon2;Parent=MS.gene81347.t1 |
| chr5.2 | CDS | 80304205 | 80304398 | 80304205 | ID=cds.MS.gene81347.t1;Parent=MS.gene81347.t1 |
| chr5.2 | exon | 80302217 | 80303086 | 80302217 | ID=MS.gene81347.t1.exon3;Parent=MS.gene81347.t1 |
| chr5.2 | CDS | 80302217 | 80303086 | 80302217 | ID=cds.MS.gene81347.t1;Parent=MS.gene81347.t1 |
| Gene Sequence |
| Protein sequence |
