Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81471.t1 | KEH26375.1 | 98.3 | 178 | 2 | 1 | 1 | 177 | 92 | 269 | 7.70E-93 | 349.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81471.t1 | Q9FLX7 | 75.7 | 152 | 36 | 1 | 1 | 152 | 6 | 156 | 2.3e-61 | 236.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81471.t1 | A0A072UKP4 | 98.3 | 178 | 2 | 1 | 1 | 177 | 92 | 269 | 5.5e-93 | 349.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050719 | MS.gene81471 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene81471 | 0.81256 | 3.99E-51 | -1.69E-46 |
| MS.gene058906 | MS.gene81471 | 0.80774 | 4.36E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81471.t1 | MTR_6g053280 | 98.315 | 178 | 2 | 1 | 1 | 177 | 92 | 269 | 6.23e-127 | 357 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81471.t1 | AT5G52840 | 75.658 | 152 | 36 | 1 | 1 | 152 | 6 | 156 | 1.52e-81 | 239 |
| MS.gene81471.t1 | AT5G52840 | 79.798 | 99 | 20 | 0 | 1 | 99 | 6 | 104 | 1.90e-52 | 163 |
| MS.gene81471.t1 | AT4G28005 | 39.869 | 153 | 35 | 4 | 1 | 152 | 6 | 102 | 1.39e-21 | 85.1 |
Find 41 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCTTTATTCTTGCCATTA+AGG | 0.186637 | 6.4:-20463217 | None:intergenic |
| TTACGATACCCTTCATCTTC+TGG | 0.262187 | 6.4:-20463333 | None:intergenic |
| ATCAACACTTCTCTTGCATT+TGG | 0.286655 | 6.4:-20463270 | None:intergenic |
| AGCGATGGCACGACCCTTAA+TGG | 0.290344 | 6.4:+20463203 | None:intergenic |
| GTCTTTATTCTTGCCATTAA+GGG | 0.290759 | 6.4:-20463216 | None:intergenic |
| TTTGTCAAGAAGAAGAAGAT+TGG | 0.344948 | 6.4:+20463391 | MS.gene81471:CDS |
| TCAACACTTCTCTTGCATTT+GGG | 0.351069 | 6.4:-20463269 | None:intergenic |
| CTTTACAAGTCATAGACTTA+AGG | 0.359250 | 6.4:+20463368 | MS.gene81471:CDS |
| AGACACCTTAGATGCACTTA+TGG | 0.361826 | 6.4:+20468502 | MS.gene81471:CDS |
| ATCTCAATTTCGTGATCATC+AGG | 0.365884 | 6.4:-20468407 | None:intergenic |
| TATTGCAGAATGGGATCCTT+GGG | 0.383342 | 6.4:+20468379 | MS.gene81471:intron |
| TTGTCAAGAAGAAGAAGATT+GGG | 0.384208 | 6.4:+20463392 | MS.gene81471:CDS |
| GTCAGCCATAAGTGCATCTA+AGG | 0.386612 | 6.4:-20468507 | None:intergenic |
| AAGGTGTCTTGAAACTCCTT+AGG | 0.391049 | 6.4:-20468488 | None:intergenic |
| GACCCTAAATGAGATCAAAA+AGG | 0.420954 | 6.4:+20463308 | MS.gene81471:CDS |
| AAACTCATTGGCTATATGAT+TGG | 0.433002 | 6.4:+20463483 | MS.gene81471:CDS |
| GCAAGAATAAAGACAACAAC+AGG | 0.445081 | 6.4:+20463225 | MS.gene81471:CDS |
| TGAGGAACATGCTTCGGAAT+TGG | 0.463895 | 6.4:-20468446 | None:intergenic |
| CAAGATGAACTCAAACTCAT+TGG | 0.466880 | 6.4:+20463471 | MS.gene81471:CDS |
| CGGTGTTGAGGAACATGCTT+CGG | 0.470272 | 6.4:-20468452 | None:intergenic |
| ACAAGAAAAGATGGTGCTGC+TGG | 0.482122 | 6.4:+20468569 | MS.gene81471:CDS |
| GTATTGCAGAATGGGATCCT+TGG | 0.482980 | 6.4:+20468378 | MS.gene81471:intron |
| ATTGAGAATCGTCTTGGTTG+TGG | 0.487668 | 6.4:+20463420 | MS.gene81471:CDS |
| GAATCGTCTTGGTTGTGGTC+AGG | 0.495827 | 6.4:+20463425 | MS.gene81471:CDS |
| ATCAAAGATGGAAAAGATAG+AGG | 0.503646 | 6.4:+20468532 | MS.gene81471:CDS |
| TATGGCTGACCCATCAAAGA+TGG | 0.511515 | 6.4:+20468520 | MS.gene81471:CDS |
| AGGTGTCTTGAAACTCCTTA+GGG | 0.525753 | 6.4:-20468487 | None:intergenic |
| GAGAAGATTGAGAATCGTCT+TGG | 0.529191 | 6.4:+20463414 | MS.gene81471:CDS |
| GTGGCTAAAACAAGAAAAGA+TGG | 0.539846 | 6.4:+20468560 | MS.gene81471:CDS |
| CCGTCCTCCTCGTCTCCCTA+AGG | 0.545794 | 6.4:+20468472 | MS.gene81471:CDS |
| AGACGAGGAGGACGGTGTTG+AGG | 0.584235 | 6.4:-20468464 | None:intergenic |
| AAGACAACAACAGGAATCGT+AGG | 0.600187 | 6.4:+20463234 | MS.gene81471:CDS |
| AAAAGGTTCCAGAAGATGAA+GGG | 0.602923 | 6.4:+20463325 | MS.gene81471:CDS |
| GGAAAAGATAGAGGAACTTG+TGG | 0.609007 | 6.4:+20468541 | MS.gene81471:CDS |
| TCTCAATTTCGTGATCATCA+GGG | 0.633734 | 6.4:-20468406 | None:intergenic |
| TGATCATCAGGGATACCCCA+AGG | 0.657129 | 6.4:-20468395 | None:intergenic |
| CCTTAGGGAGACGAGGAGGA+CGG | 0.660867 | 6.4:-20468472 | None:intergenic |
| TGATGATCACGAAATTGAGA+TGG | 0.663792 | 6.4:+20468409 | MS.gene81471:CDS |
| TGAAACTCCTTAGGGAGACG+AGG | 0.673297 | 6.4:-20468479 | None:intergenic |
| AACTCCTTAGGGAGACGAGG+AGG | 0.696168 | 6.4:-20468476 | None:intergenic |
| ATTGCAGAATGGGATCCTTG+GGG | 0.697431 | 6.4:+20468380 | MS.gene81471:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATGTATATTACTAAAAT+AGG | + | chr6.4:20466504-20466523 | MS.gene81471:intron | 10.0% |
| !! | AAAATAGAAAAATAGTAGAA+GGG | - | chr6.4:20466164-20466183 | None:intergenic | 15.0% |
| !! | AATTATTTCATAATCAATTC+TGG | - | chr6.4:20466358-20466377 | None:intergenic | 15.0% |
| !! | ATTATCAAACAATTAAGATT+TGG | - | chr6.4:20468335-20468354 | None:intergenic | 15.0% |
| !! | TAACATAATTGATTAATGTT+TGG | + | chr6.4:20466414-20466433 | MS.gene81471:intron | 15.0% |
| !! | TCTTATTATTTAATCATGAT+GGG | - | chr6.4:20465979-20465998 | None:intergenic | 15.0% |
| !!! | ATCTCTTTATTTGTATATAA+AGG | + | chr6.4:20466026-20466045 | MS.gene81471:intron | 15.0% |
| !!! | TATAATGTGTATTTTATGTT+TGG | + | chr6.4:20468118-20468137 | MS.gene81471:intron | 15.0% |
| !!! | TATTTATTTTACAATGTTTG+TGG | + | chr6.4:20463746-20463765 | MS.gene81471:intron | 15.0% |
| !!! | TCTCTTTATTTGTATATAAA+GGG | + | chr6.4:20466027-20466046 | MS.gene81471:intron | 15.0% |
| !!! | TGGTTTTAAAAAAAAAACAA+GGG | + | chr6.4:20464711-20464730 | MS.gene81471:intron | 15.0% |
| !!! | TTGGTTTTAAAAAAAAAACA+AGG | + | chr6.4:20464710-20464729 | MS.gene81471:intron | 15.0% |
| !!! | TTGTTTTTTTTTTAAAACCA+AGG | - | chr6.4:20464711-20464730 | None:intergenic | 15.0% |
| !! | AAAAAGTAGGGAATTTATTT+GGG | + | chr6.4:20466304-20466323 | MS.gene81471:intron | 20.0% |
| !! | AAAACATTAGACATTTAGTT+AGG | + | chr6.4:20468010-20468029 | MS.gene81471:intron | 20.0% |
| !! | AAACATTAGACATTTAGTTA+GGG | + | chr6.4:20468011-20468030 | MS.gene81471:intron | 20.0% |
| !! | AAATATCACATTTGAATCTA+AGG | - | chr6.4:20464373-20464392 | None:intergenic | 20.0% |
| !! | AAATTTAAACTCATAACACA+AGG | - | chr6.4:20467911-20467930 | None:intergenic | 20.0% |
| !! | AATCCATATTTGTATATGTT+TGG | - | chr6.4:20466803-20466822 | None:intergenic | 20.0% |
| !! | AATTCAATACTCTTATCAAA+AGG | + | chr6.4:20464308-20464327 | MS.gene81471:intron | 20.0% |
| !! | AGATGGTAATTAAATAAAAC+AGG | - | chr6.4:20466209-20466228 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6.4:20466005-20466024 | None:intergenic | 20.0% |
| !! | CATCATGATTAAATAATAAG+AGG | + | chr6.4:20465978-20465997 | MS.gene81471:intron | 20.0% |
| !! | CTCTTATTATTTAATCATGA+TGG | - | chr6.4:20465980-20465999 | None:intergenic | 20.0% |
| !! | GAAAATAGAAAAATAGTAGA+AGG | - | chr6.4:20466165-20466184 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+GGG | - | chr6.4:20466208-20466227 | None:intergenic | 20.0% |
| !! | GTTAGGAATAATGATAAATT+GGG | + | chr6.4:20463610-20463629 | MS.gene81471:intron | 20.0% |
| !! | TACGAAATACTAATAAAGAA+TGG | + | chr6.4:20468094-20468113 | MS.gene81471:intron | 20.0% |
| !! | TTAGACATATATTCAACTAT+AGG | - | chr6.4:20467285-20467304 | None:intergenic | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6.4:20466004-20466023 | None:intergenic | 20.0% |
| !!! | AACTAAATGTCTAATGTTTT+AGG | - | chr6.4:20468010-20468029 | None:intergenic | 20.0% |
| !!! | CTCTTTATTTGTATATAAAG+GGG | + | chr6.4:20466028-20466047 | MS.gene81471:intron | 20.0% |
| !!! | GATCAAAATTCATTGATTTT+AGG | + | chr6.4:20465630-20465649 | MS.gene81471:intron | 20.0% |
| !!! | GATTTTGAGATAATTGATTT+TGG | + | chr6.4:20466378-20466397 | MS.gene81471:intron | 20.0% |
| !!! | TAAAAAAATAGGTTTTTCGA+AGG | - | chr6.4:20467604-20467623 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6.4:20467537-20467556 | None:intergenic | 20.0% |
| !!! | TTGGTTATTTTGTTTTTCTA+GGG | + | chr6.4:20465722-20465741 | MS.gene81471:intron | 20.0% |
| !!! | TTGTTGTTCTTTTGTATTAT+CGG | + | chr6.4:20466889-20466908 | MS.gene81471:intron | 20.0% |
| !!! | TTTACTATTTGTTGCAAATT+GGG | + | chr6.4:20465874-20465893 | MS.gene81471:intron | 20.0% |
| !!! | TTTAGGATCTTCAAAAATTT+AGG | - | chr6.4:20467993-20468012 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6.4:20467538-20467557 | None:intergenic | 20.0% |
| !!! | TTTGGTTATTTTGTTTTTCT+AGG | + | chr6.4:20465721-20465740 | MS.gene81471:intron | 20.0% |
| !!! | TTTTACTATTTGTTGCAAAT+TGG | + | chr6.4:20465873-20465892 | MS.gene81471:intron | 20.0% |
| !!! | TTTTCCATTTGTATCAATAA+AGG | + | chr6.4:20466180-20466199 | MS.gene81471:intron | 20.0% |
| !!! | TTTTGAATTTTTTTGTGATC+TGG | + | chr6.4:20463541-20463560 | MS.gene81471:intron | 20.0% |
| !!! | TTTTTACAATGTTTTTGTTG+AGG | + | chr6.4:20463588-20463607 | MS.gene81471:intron | 20.0% |
| !!! | TTTTTTTCACTTCATGAATT+TGG | + | chr6.4:20468203-20468222 | MS.gene81471:intron | 20.0% |
| !!! | TTTTTTTTTTGTTACAGAGA+GGG | - | chr6.4:20464494-20464513 | None:intergenic | 20.0% |
| ! | AACATTAGACATTTAGTTAG+GGG | + | chr6.4:20468012-20468031 | MS.gene81471:intron | 25.0% |
| ! | ACAATAAATACGGTATAACA+CGG | - | chr6.4:20467170-20467189 | None:intergenic | 25.0% |
| ! | ACATTCAATTCATTCATTTG+TGG | + | chr6.4:20464157-20464176 | MS.gene81471:intron | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6.4:20467337-20467356 | MS.gene81471:intron | 25.0% |
| ! | ATTGAGAAAATTCTAAACCA+TGG | - | chr6.4:20466851-20466870 | None:intergenic | 25.0% |
| ! | CAAACAAGAAAATAAACAGA+TGG | - | chr6.4:20466226-20466245 | None:intergenic | 25.0% |
| ! | CAACCAAACATATACAAATA+TGG | + | chr6.4:20466797-20466816 | MS.gene81471:intron | 25.0% |
| ! | CCACAAAAACAACAAAAATA+AGG | - | chr6.4:20465038-20465057 | None:intergenic | 25.0% |
| ! | GAAAAAGTAGGGAATTTATT+TGG | + | chr6.4:20466303-20466322 | MS.gene81471:intron | 25.0% |
| ! | GAATGAAAGTTAGATGAAAA+TGG | + | chr6.4:20465786-20465805 | MS.gene81471:intron | 25.0% |
| ! | GGTTAGGAATAATGATAAAT+TGG | + | chr6.4:20463609-20463628 | MS.gene81471:intron | 25.0% |
| ! | GTATTTCGTAAAATTCACAT+CGG | - | chr6.4:20468084-20468103 | None:intergenic | 25.0% |
| ! | TAAGAGCCTGTATTAAAAAA+AGG | - | chr6.4:20467847-20467866 | None:intergenic | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6.4:20465929-20465948 | MS.gene81471:intron | 25.0% |
| ! | TCATGTGTTAAAGACATAAA+CGG | + | chr6.4:20465117-20465136 | MS.gene81471:intron | 25.0% |
| ! | TCCTAAAAGTTATGAAATAG+CGG | + | chr6.4:20465309-20465328 | MS.gene81471:intron | 25.0% |
| ! | TTAGGTAGATTATTAGTAAG+TGG | + | chr6.4:20465953-20465972 | MS.gene81471:intron | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr6.4:20464676-20464695 | None:intergenic | 25.0% |
| ! | TTTCATCAATGCATAAAGAA+AGG | - | chr6.4:20463811-20463830 | None:intergenic | 25.0% |
| !! | AACCTTTTTGATCTCATTTA+GGG | - | chr6.4:20463313-20463332 | None:intergenic | 25.0% |
| !! | CATGAATTTGGTAACTATTA+AGG | + | chr6.4:20468215-20468234 | MS.gene81471:intron | 25.0% |
| !! | GAAATTAAGAGAAAGTGTAT+GGG | + | chr6.4:20466584-20466603 | MS.gene81471:intron | 25.0% |
| !! | TGAAATTAAGAGAAAGTGTA+TGG | + | chr6.4:20466583-20466602 | MS.gene81471:intron | 25.0% |
| !! | TGTTGTTCTTTTGTATTATC+GGG | + | chr6.4:20466890-20466909 | MS.gene81471:intron | 25.0% |
| !!! | AATGAATTTTGATCCATCAA+GGG | - | chr6.4:20465624-20465643 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCTAGGGTTT+TGG | + | chr6.4:20465728-20465747 | MS.gene81471:intron | 25.0% |
| !!! | CATCTGTTTATTTTCTTGTT+TGG | + | chr6.4:20466224-20466243 | MS.gene81471:intron | 25.0% |
| !!! | CCTTATTTTTGTTGTTTTTG+TGG | + | chr6.4:20465035-20465054 | MS.gene81471:intron | 25.0% |
| !!! | CTTTTTTTTTTGTTACAGAG+AGG | - | chr6.4:20464495-20464514 | None:intergenic | 25.0% |
| !!! | TGATCTGTTTTGTGTTTTTT+AGG | + | chr6.4:20464187-20464206 | MS.gene81471:intron | 25.0% |
| !!! | TTTGTGGTTTTATACAGTAA+GGG | + | chr6.4:20463762-20463781 | MS.gene81471:intron | 25.0% |
| AAAAAGGTAGTGACTTATGT+AGG | - | chr6.4:20467481-20467500 | None:intergenic | 30.0% | |
| AAATTATTACCACTGTTGAC+GGG | + | chr6.4:20465506-20465525 | MS.gene81471:intron | 30.0% | |
| AACGCATTTCTCTCAAAAAA+CGG | + | chr6.4:20464815-20464834 | MS.gene81471:intron | 30.0% | |
| AAGCACAAAGTGATTTAACT+TGG | - | chr6.4:20466747-20466766 | None:intergenic | 30.0% | |
| ATCAAAGATGGAAAAGATAG+AGG | + | chr6.4:20468532-20468551 | MS.gene81471:CDS | 30.0% | |
| ATGTATGTTGTTCATTCATG+TGG | + | chr6.4:20467039-20467058 | MS.gene81471:intron | 30.0% | |
| ATTGAAATATCAACCCTTGA+TGG | + | chr6.4:20465608-20465627 | MS.gene81471:intron | 30.0% | |
| CAAATTATTACCACTGTTGA+CGG | + | chr6.4:20465505-20465524 | MS.gene81471:intron | 30.0% | |
| CAGAATGGACACAATAAATA+CGG | - | chr6.4:20467180-20467199 | None:intergenic | 30.0% | |
| CAGATAATGACAGAGAAATA+GGG | - | chr6.4:20467811-20467830 | None:intergenic | 30.0% | |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6.4:20467192-20467211 | MS.gene81471:intron | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr6.4:20464769-20464788 | MS.gene81471:intron | 30.0% | |
| CTTTACAAGTCATAGACTTA+AGG | + | chr6.4:20463368-20463387 | MS.gene81471:CDS | 30.0% | |
| CTTTATTGAGGCTATGAATT+AGG | + | chr6.4:20463988-20464007 | MS.gene81471:intron | 30.0% | |
| GAAAATGGTAGGCAATTATT+TGG | + | chr6.4:20465801-20465820 | MS.gene81471:intron | 30.0% | |
| GAAAGTTAGATGAAAATGGT+AGG | + | chr6.4:20465790-20465809 | MS.gene81471:intron | 30.0% | |
| GAACATAAATGTTGACAAAG+AGG | - | chr6.4:20467734-20467753 | None:intergenic | 30.0% | |
| GGATGTTCTGTATTTGATTA+TGG | + | chr6.4:20464208-20464227 | MS.gene81471:intron | 30.0% | |
| GTATATAAAGGGGAATTCTT+GGG | + | chr6.4:20466038-20466057 | MS.gene81471:intron | 30.0% | |
| GTCATTATCTGATATTATCG+AGG | + | chr6.4:20467820-20467839 | MS.gene81471:intron | 30.0% | |
| GTCTTTATTCTTGCCATTAA+GGG | - | chr6.4:20463219-20463238 | None:intergenic | 30.0% | |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6.4:20467661-20467680 | None:intergenic | 30.0% | |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6.4:20466251-20466270 | MS.gene81471:intron | 30.0% | |
| GTTGAAATTACGTCAAAAGT+GGG | - | chr6.4:20467454-20467473 | None:intergenic | 30.0% | |
| TACTAACAAATGACTAGACT+GGG | - | chr6.4:20464412-20464431 | None:intergenic | 30.0% | |
| TATGTGTTGTATTGCAGAAT+GGG | + | chr6.4:20468370-20468389 | MS.gene81471:intron | 30.0% | |
| TCAATCAGAGTAGTTAATAG+CGG | + | chr6.4:20464517-20464536 | MS.gene81471:intron | 30.0% | |
| TCAGATAATGACAGAGAAAT+AGG | - | chr6.4:20467812-20467831 | None:intergenic | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr6.4:20464691-20464710 | MS.gene81471:intron | 30.0% | |
| TGAATATATGTCTAAGTGTC+CGG | + | chr6.4:20467290-20467309 | MS.gene81471:intron | 30.0% | |
| TGTATATAAAGGGGAATTCT+TGG | + | chr6.4:20466037-20466056 | MS.gene81471:intron | 30.0% | |
| TGTCTTATGTGTCTTTATTG+AGG | + | chr6.4:20463976-20463995 | MS.gene81471:intron | 30.0% | |
| TGTCTTTATTCTTGCCATTA+AGG | - | chr6.4:20463220-20463239 | None:intergenic | 30.0% | |
| TGTTGAAATTACGTCAAAAG+TGG | - | chr6.4:20467455-20467474 | None:intergenic | 30.0% | |
| TGTTTATGAACAAAACAGAG+AGG | - | chr6.4:20464967-20464986 | None:intergenic | 30.0% | |
| TTAAAACACCCTCTCATATT+AGG | - | chr6.4:20465908-20465927 | None:intergenic | 30.0% | |
| TTATGTGTTGTATTGCAGAA+TGG | + | chr6.4:20468369-20468388 | MS.gene81471:intron | 30.0% | |
| TTATGTTTGGCTACATGAAT+AGG | + | chr6.4:20468131-20468150 | MS.gene81471:intron | 30.0% | |
| TTGCTTGGCAATTTAATCAT+TGG | + | chr6.4:20465159-20465178 | MS.gene81471:intron | 30.0% | |
| TTGGCAATTTAATCATTGGA+AGG | + | chr6.4:20465163-20465182 | MS.gene81471:intron | 30.0% | |
| TTGTCAAGAAGAAGAAGATT+GGG | + | chr6.4:20463392-20463411 | MS.gene81471:CDS | 30.0% | |
| TTTCAGTGCTTCATAATCAA+TGG | + | chr6.4:20465557-20465576 | MS.gene81471:intron | 30.0% | |
| TTTGTCAAGAAGAAGAAGAT+TGG | + | chr6.4:20463391-20463410 | MS.gene81471:CDS | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6.4:20467649-20467668 | None:intergenic | 30.0% |
| ! | AAACTCATTGGCTATATGAT+TGG | + | chr6.4:20463483-20463502 | MS.gene81471:CDS | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6.4:20466075-20466094 | MS.gene81471:intron | 30.0% |
| ! | CATACTAGAATCGATTCAAT+TGG | + | chr6.4:20466631-20466650 | MS.gene81471:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6.4:20466076-20466095 | MS.gene81471:intron | 30.0% |
| ! | CTATCTTTTCCATCTTTGAT+GGG | - | chr6.4:20468532-20468551 | None:intergenic | 30.0% |
| ! | GAACCTTTTTGATCTCATTT+AGG | - | chr6.4:20463314-20463333 | None:intergenic | 30.0% |
| ! | GACTGTTATGTTATGTGTTT+TGG | + | chr6.4:20465703-20465722 | MS.gene81471:intron | 30.0% |
| ! | GGTTGATATTTCAATCACTT+AGG | - | chr6.4:20465603-20465622 | None:intergenic | 30.0% |
| ! | GTAACTCATCATATTTTACC+TGG | + | chr6.4:20466963-20466982 | MS.gene81471:intron | 30.0% |
| ! | GTTCTAGGCTGTAAAAAAAT+AGG | - | chr6.4:20467615-20467634 | None:intergenic | 30.0% |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6.4:20467110-20467129 | None:intergenic | 30.0% |
| ! | TCTATCTTTTCCATCTTTGA+TGG | - | chr6.4:20468533-20468552 | None:intergenic | 30.0% |
| ! | TTGTTAGTAGCTGATGTTTT+GGG | + | chr6.4:20464423-20464442 | MS.gene81471:intron | 30.0% |
| ! | TTTGTTAGTAGCTGATGTTT+TGG | + | chr6.4:20464422-20464441 | MS.gene81471:intron | 30.0% |
| !! | ACAATGTTTTTGTTGAGGTT+AGG | + | chr6.4:20463593-20463612 | MS.gene81471:intron | 30.0% |
| !! | ACCGCTATTTCATAACTTTT+AGG | - | chr6.4:20465313-20465332 | None:intergenic | 30.0% |
| !! | CAATGAATTTTGATCCATCA+AGG | - | chr6.4:20465625-20465644 | None:intergenic | 30.0% |
| !! | CGATCTGATTTGTGAATTTT+AGG | + | chr6.4:20463722-20463741 | MS.gene81471:intron | 30.0% |
| !! | GATTTTAGGTGATTTCACTT+TGG | + | chr6.4:20465644-20465663 | MS.gene81471:intron | 30.0% |
| !! | GGGTGTTTTAAGTAATTAGT+AGG | + | chr6.4:20465917-20465936 | MS.gene81471:intron | 30.0% |
| !! | GTTGTCGATTTATGATGTTT+GGG | + | chr6.4:20466459-20466478 | MS.gene81471:intron | 30.0% |
| !! | TAGGTTTTTCGAAGGAAAAA+TGG | - | chr6.4:20467596-20467615 | None:intergenic | 30.0% |
| !! | TCATTTGCTGTGTAAAATAC+AGG | + | chr6.4:20467943-20467962 | MS.gene81471:intron | 30.0% |
| !! | TGTGGGTTTTATAGTCTTAA+TGG | - | chr6.4:20467520-20467539 | None:intergenic | 30.0% |
| !! | TGTTGTCGATTTATGATGTT+TGG | + | chr6.4:20466458-20466477 | MS.gene81471:intron | 30.0% |
| !! | TTTTGAGAGAAATGCGTTTT+GGG | - | chr6.4:20464813-20464832 | None:intergenic | 30.0% |
| !! | TTTTTGAGAGAAATGCGTTT+TGG | - | chr6.4:20464814-20464833 | None:intergenic | 30.0% |
| !!! | AAGATTTTCAAGTTCATTGC+TGG | + | chr6.4:20468164-20468183 | MS.gene81471:intron | 30.0% |
| !!! | AGGCTCTTAATTTTTTTCAG+TGG | + | chr6.4:20467858-20467877 | MS.gene81471:intron | 30.0% |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6.4:20467195-20467214 | None:intergenic | 30.0% |
| !!! | CTTTTGATAGGAAGTGTTTT+CGG | + | chr6.4:20464092-20464111 | MS.gene81471:intron | 30.0% |
| !!! | GTTTGTGGTTTTATACAGTA+AGG | + | chr6.4:20463761-20463780 | MS.gene81471:intron | 30.0% |
| !!! | TTTTAGAGTGTAAAGTGAGT+AGG | + | chr6.4:20464043-20464062 | MS.gene81471:intron | 30.0% |
| AAAAAGGTTCCAGAAGATGA+AGG | + | chr6.4:20463324-20463343 | MS.gene81471:CDS | 35.0% | |
| AAAAGGTTCCAGAAGATGAA+GGG | + | chr6.4:20463325-20463344 | MS.gene81471:CDS | 35.0% | |
| AATAGAGGATGACAAAACAG+AGG | - | chr6.4:20465002-20465021 | None:intergenic | 35.0% | |
| AATGGTAGGCAATTATTTGG+AGG | + | chr6.4:20465804-20465823 | MS.gene81471:intron | 35.0% | |
| ACTACATTACAACCAAGTGA+GGG | - | chr6.4:20464458-20464477 | None:intergenic | 35.0% | |
| AGCAATGTCGAGATTATCAT+CGG | - | chr6.4:20465144-20465163 | None:intergenic | 35.0% | |
| ATATAGCATTCAATGCTCCA+TGG | + | chr6.4:20466831-20466850 | MS.gene81471:intron | 35.0% | |
| ATCAACACTTCTCTTGCATT+TGG | - | chr6.4:20463273-20463292 | None:intergenic | 35.0% | |
| ATCTCAATTTCGTGATCATC+AGG | - | chr6.4:20468410-20468429 | None:intergenic | 35.0% | |
| ATGATAATCTCGACATTGCT+TGG | + | chr6.4:20465144-20465163 | MS.gene81471:intron | 35.0% | |
| ATGCATCTTACTACTAAAGC+TGG | + | chr6.4:20468238-20468257 | MS.gene81471:intron | 35.0% | |
| ATGGTAGGCAATTATTTGGA+GGG | + | chr6.4:20465805-20465824 | MS.gene81471:intron | 35.0% | |
| CAAGATGAACTCAAACTCAT+TGG | + | chr6.4:20463471-20463490 | MS.gene81471:CDS | 35.0% | |
| CATATAGGAATAGAGAGACT+TGG | - | chr6.4:20467775-20467794 | None:intergenic | 35.0% | |
| CGAAAACACTTCCTATCAAA+AGG | - | chr6.4:20464094-20464113 | None:intergenic | 35.0% | |
| CTAACTAGGAAGAGAATTGA+TGG | - | chr6.4:20468056-20468075 | None:intergenic | 35.0% | |
| CTACTAACAAATGACTAGAC+TGG | - | chr6.4:20464413-20464432 | None:intergenic | 35.0% | |
| CTATCCGCTATTAACTACTA+TGG | + | chr6.4:20465389-20465408 | MS.gene81471:intron | 35.0% | |
| CTTCATGACTGTTTCATAGT+TGG | + | chr6.4:20467376-20467395 | MS.gene81471:intron | 35.0% | |
| GACCCTAAATGAGATCAAAA+AGG | + | chr6.4:20463308-20463327 | MS.gene81471:CDS | 35.0% | |
| GAGACCATAGTAGTTAATAG+CGG | - | chr6.4:20465396-20465415 | None:intergenic | 35.0% | |
| GAGAGAAACTGAAGTTATCA+AGG | - | chr6.4:20464750-20464769 | None:intergenic | 35.0% | |
| GCAAGAATAAAGACAACAAC+AGG | + | chr6.4:20463225-20463244 | MS.gene81471:CDS | 35.0% | |
| GGAGACATGCAAAAACATAT+AGG | - | chr6.4:20467790-20467809 | None:intergenic | 35.0% | |
| GGTGCCTTTATTGATACAAA+TGG | - | chr6.4:20466187-20466206 | None:intergenic | 35.0% | |
| GTAGGTCGTTAATTAGGTTT+AGG | + | chr6.4:20465935-20465954 | MS.gene81471:intron | 35.0% | |
| GTGAGTATGATCAATAGTCT+CGG | + | chr6.4:20464284-20464303 | MS.gene81471:intron | 35.0% | |
| GTGGCTAAAACAAGAAAAGA+TGG | + | chr6.4:20468560-20468579 | MS.gene81471:CDS | 35.0% | |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6.4:20467637-20467656 | None:intergenic | 35.0% | |
| TCAACACTTCTCTTGCATTT+GGG | - | chr6.4:20463272-20463291 | None:intergenic | 35.0% | |
| TCTCAATTTCGTGATCATCA+GGG | - | chr6.4:20468409-20468428 | None:intergenic | 35.0% | |
| TGATGATCACGAAATTGAGA+TGG | + | chr6.4:20468409-20468428 | MS.gene81471:CDS | 35.0% | |
| TTTAGGTGATTTCACTTTGG+TGG | + | chr6.4:20465647-20465666 | MS.gene81471:intron | 35.0% | |
| ! | AATTGTGTGAATGAGTACTG+AGG | + | chr6.4:20467116-20467135 | MS.gene81471:intron | 35.0% |
| ! | GTTCTTTTGTATTATCGGGT+TGG | + | chr6.4:20466894-20466913 | MS.gene81471:intron | 35.0% |
| ! | TACATAGAGCATTATGTACC+AGG | - | chr6.4:20466984-20467003 | None:intergenic | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr6.4:20465348-20465367 | MS.gene81471:intron | 35.0% |
| ! | TCAGTGGTTCTTTTCTTGTT+TGG | + | chr6.4:20467874-20467893 | MS.gene81471:intron | 35.0% |
| ! | TGTTAGTAGCTGATGTTTTG+GGG | + | chr6.4:20464424-20464443 | MS.gene81471:intron | 35.0% |
| ! | TTTGAGAGAAATGCGTTTTG+GGG | - | chr6.4:20464812-20464831 | None:intergenic | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6.4:20466260-20466279 | MS.gene81471:intron | 35.0% |
| !! | ATTGTGTGAATGAGTACTGA+GGG | + | chr6.4:20467117-20467136 | MS.gene81471:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6.4:20466259-20466278 | MS.gene81471:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr6.4:20465389-20465408 | None:intergenic | 35.0% |
| !! | TCTTTTCTTGTTTGGTCACT+CGG | + | chr6.4:20467882-20467901 | MS.gene81471:intron | 35.0% |
| !!! | ATTCTTGGGAGTTTTAGAGT+TGG | + | chr6.4:20466052-20466071 | MS.gene81471:intron | 35.0% |
| !!! | CGAGGACCTTTTTTTAATAC+AGG | + | chr6.4:20467838-20467857 | MS.gene81471:intron | 35.0% |
| !!! | GCTACAGATAGTAGCTTTTT+TGG | - | chr6.4:20466657-20466676 | None:intergenic | 35.0% |
| AACAAATGACTAGACTGGGT+CGG | - | chr6.4:20464408-20464427 | None:intergenic | 40.0% | |
| AAGACAACAACAGGAATCGT+AGG | + | chr6.4:20463234-20463253 | MS.gene81471:CDS | 40.0% | |
| AGACACCTTAGATGCACTTA+TGG | + | chr6.4:20468502-20468521 | MS.gene81471:CDS | 40.0% | |
| AGGATTCATCTGAGTTGTGT+CGG | + | chr6.4:20466106-20466125 | MS.gene81471:intron | 40.0% | |
| AGGTGTCTTGAAACTCCTTA+GGG | - | chr6.4:20468490-20468509 | None:intergenic | 40.0% | |
| ATCCATGGGTTCCTATCATT+GGG | + | chr6.4:20466274-20466293 | MS.gene81471:intron | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+TGG | + | chr6.4:20463420-20463439 | MS.gene81471:CDS | 40.0% | |
| CCAGATGCTTTAGCTAATCT+TGG | + | chr6.4:20464342-20464361 | MS.gene81471:intron | 40.0% | |
| CGTTAGGACCTAATATGAGA+GGG | + | chr6.4:20465897-20465916 | MS.gene81471:intron | 40.0% | |
| CTACATTACAACCAAGTGAG+GGG | - | chr6.4:20464457-20464476 | None:intergenic | 40.0% | |
| GAAGTTACAAACCTGAGGAA+CGG | - | chr6.4:20464911-20464930 | None:intergenic | 40.0% | |
| GACTACATTACAACCAAGTG+AGG | - | chr6.4:20464459-20464478 | None:intergenic | 40.0% | |
| GAGAAGATTGAGAATCGTCT+TGG | + | chr6.4:20463414-20463433 | MS.gene81471:CDS | 40.0% | |
| GGAAAAGATAGAGGAACTTG+TGG | + | chr6.4:20468541-20468560 | MS.gene81471:CDS | 40.0% | |
| GTCAAGAAGTTACAAACCTG+AGG | - | chr6.4:20464916-20464935 | None:intergenic | 40.0% | |
| GTTGAAACTCTCTAAACGTG+CGG | - | chr6.4:20466774-20466793 | None:intergenic | 40.0% | |
| TATAGAAGAGAGCAAACACG+AGG | - | chr6.4:20464938-20464957 | None:intergenic | 40.0% | |
| TATCTCATAATGCTACGCCA+TGG | - | chr6.4:20464604-20464623 | None:intergenic | 40.0% | |
| TATTGCAGAATGGGATCCTT+GGG | + | chr6.4:20468379-20468398 | MS.gene81471:intron | 40.0% | |
| TGTATGGGTAGTTAGGTAAG+AGG | + | chr6.4:20466599-20466618 | MS.gene81471:intron | 40.0% | |
| TTACGATACCCTTCATCTTC+TGG | - | chr6.4:20463336-20463355 | None:intergenic | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6.4:20467630-20467649 | None:intergenic | 40.0% | |
| TTTGTTGCAAATTGGGCGTT+AGG | + | chr6.4:20465881-20465900 | MS.gene81471:intron | 40.0% | |
| ! | AAAAATGGCGTTGAACTTGG+CGG | - | chr6.4:20467581-20467600 | None:intergenic | 40.0% |
| ! | AAGGTGTCTTGAAACTCCTT+AGG | - | chr6.4:20468491-20468510 | None:intergenic | 40.0% |
| ! | AGGAAAAATGGCGTTGAACT+TGG | - | chr6.4:20467584-20467603 | None:intergenic | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | + | chr6.4:20465349-20465368 | MS.gene81471:intron | 40.0% |
| ! | CACTTCCTATCAAAAGGTGT+TGG | - | chr6.4:20464088-20464107 | None:intergenic | 40.0% |
| ! | CCAAGATTAGCTAAAGCATC+TGG | - | chr6.4:20464345-20464364 | None:intergenic | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr6.4:20465347-20465366 | MS.gene81471:intron | 40.0% |
| ! | GAGAAAGTGTATGGGTAGTT+AGG | + | chr6.4:20466592-20466611 | MS.gene81471:intron | 40.0% |
| ! | GTAATGTAGTCCCTTTTTCC+CGG | + | chr6.4:20464468-20464487 | MS.gene81471:intron | 40.0% |
| ! | GTTTTTGACACTGACACATG+TGG | + | chr6.4:20465458-20465477 | MS.gene81471:intron | 40.0% |
| ! | TTGCTCCAACACCTTTTGAT+AGG | + | chr6.4:20464080-20464099 | MS.gene81471:intron | 40.0% |
| ! | TTTCTGTTTAGGGCTAGAGT+AGG | + | chr6.4:20466086-20466105 | MS.gene81471:intron | 40.0% |
| ! | TTTGGGATGAAGTGTGTGTT+TGG | + | chr6.4:20466321-20466340 | MS.gene81471:intron | 40.0% |
| ! | TTTTGTGGACAACACAGTCA+TGG | + | chr6.4:20465050-20465069 | MS.gene81471:intron | 40.0% |
| !! | ATCAAAAGGTGTTGGAGCAA+TGG | - | chr6.4:20464080-20464099 | None:intergenic | 40.0% |
| !!! | CTTTTTGGGTTCTTCATTGG+AGG | - | chr6.4:20468597-20468616 | None:intergenic | 40.0% |
| !!! | TGGCTTTTTGGGTTCTTCAT+TGG | - | chr6.4:20468600-20468619 | None:intergenic | 40.0% |
| !!! | TTGGGAGTTTTAGAGTTGGA+CGG | + | chr6.4:20466056-20466075 | MS.gene81471:intron | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | - | chr6.4:20464797-20464816 | None:intergenic | 40.0% |
| !!! | TTTTTTGTTACAGAGAGGGC+CGG | - | chr6.4:20464490-20464509 | None:intergenic | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr6.4:20464642-20464661 | None:intergenic | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6.4:20467439-20467458 | None:intergenic | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | + | chr6.4:20464528-20464547 | MS.gene81471:intron | 45.0% | |
| AGTTAGGTAAGAGGACAGCA+AGG | + | chr6.4:20466608-20466627 | MS.gene81471:intron | 45.0% | |
| ATTGCAGAATGGGATCCTTG+GGG | + | chr6.4:20468380-20468399 | MS.gene81471:intron | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | - | chr6.4:20465355-20465374 | None:intergenic | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | - | chr6.4:20465354-20465373 | None:intergenic | 45.0% | |
| GATCCATGGGTTCCTATCAT+TGG | + | chr6.4:20466273-20466292 | MS.gene81471:intron | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr6.4:20464775-20464794 | None:intergenic | 45.0% | |
| GCGTTAGGACCTAATATGAG+AGG | + | chr6.4:20465896-20465915 | MS.gene81471:intron | 45.0% | |
| GGAAACAGAGAGCAGAATAG+AGG | - | chr6.4:20465017-20465036 | None:intergenic | 45.0% | |
| GGCGTAGCATTATGAGATAG+CGG | + | chr6.4:20464605-20464624 | MS.gene81471:intron | 45.0% | |
| GTATTGCAGAATGGGATCCT+TGG | + | chr6.4:20468378-20468397 | MS.gene81471:intron | 45.0% | |
| GTCAGCCATAAGTGCATCTA+AGG | - | chr6.4:20468510-20468529 | None:intergenic | 45.0% | |
| TAGAGAGACTTGGAACAGAG+AGG | - | chr6.4:20467765-20467784 | None:intergenic | 45.0% | |
| TATGGCTGACCCATCAAAGA+TGG | + | chr6.4:20468520-20468539 | MS.gene81471:CDS | 45.0% | |
| TCCATGGGTTCCTATCATTG+GGG | + | chr6.4:20466275-20466294 | MS.gene81471:intron | 45.0% | |
| TGAGGAACATGCTTCGGAAT+TGG | - | chr6.4:20468449-20468468 | None:intergenic | 45.0% | |
| TGGTGTCTGACATCAACATG+TGG | + | chr6.4:20467320-20467339 | MS.gene81471:intron | 45.0% | |
| TTGTGTCGGAGCTTTGCTTT+GGG | + | chr6.4:20466120-20466139 | MS.gene81471:intron | 45.0% | |
| ! | CACGTGTGTTGTGTTGATGT+CGG | - | chr6.4:20464134-20464153 | None:intergenic | 45.0% |
| ! | GTGTGTGCGCTTTTCAATGT+GGG | + | chr6.4:20465760-20465779 | MS.gene81471:intron | 45.0% |
| ! | TATTACCACTGTTGACGGGT+TGG | + | chr6.4:20465510-20465529 | MS.gene81471:intron | 45.0% |
| ! | TGTGTGTGCGCTTTTCAATG+TGG | + | chr6.4:20465759-20465778 | MS.gene81471:intron | 45.0% |
| ! | TGTTGTGTTGATGTCGGAAG+CGG | - | chr6.4:20464128-20464147 | None:intergenic | 45.0% |
| ! | TTTTCAGCACCCCCAATGAT+AGG | - | chr6.4:20466288-20466307 | None:intergenic | 45.0% |
| ! | TTTTTGTTACAGAGAGGGCC+GGG | - | chr6.4:20464489-20464508 | None:intergenic | 45.0% |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6.4:20468569-20468588 | MS.gene81471:CDS | 45.0% |
| !! | ATTGGGGGTGCTGAAAAAGT+AGG | + | chr6.4:20466291-20466310 | MS.gene81471:intron | 45.0% |
| !! | GAAGTGTGTGTTTGGTTCTG+CGG | + | chr6.4:20466329-20466348 | MS.gene81471:intron | 45.0% |
| !! | GAATGAGTACTGAGGGAAAC+AGG | + | chr6.4:20467124-20467143 | MS.gene81471:intron | 45.0% |
| !! | TCACATCGGTGTCACTAACT+AGG | - | chr6.4:20468070-20468089 | None:intergenic | 45.0% |
| !! | TTGGGGGTGCTGAAAAAGTA+GGG | + | chr6.4:20466292-20466311 | MS.gene81471:intron | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr6.4:20465353-20465372 | MS.gene81471:intron | 45.0% |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6.4:20467438-20467457 | None:intergenic | 50.0% | |
| ACCACAAACACCTGTGCAGA+AGG | + | chr6.4:20465419-20465438 | MS.gene81471:intron | 50.0% | |
| ACCTTCTGCACAGGTGTTTG+TGG | - | chr6.4:20465423-20465442 | None:intergenic | 50.0% | |
| ATGTGAGACACCTTCTGCAC+AGG | - | chr6.4:20465432-20465451 | None:intergenic | 50.0% | |
| CCATGGGTTCCTATCATTGG+GGG | + | chr6.4:20466276-20466295 | MS.gene81471:intron | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr6.4:20464589-20464608 | None:intergenic | 50.0% | |
| CGTTGAACTTGGCGGTTGAT+TGG | - | chr6.4:20467573-20467592 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | + | chr6.4:20465322-20465341 | MS.gene81471:intron | 50.0% | |
| GAATCGTCTTGGTTGTGGTC+AGG | + | chr6.4:20463425-20463444 | MS.gene81471:CDS | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr6.4:20464584-20464603 | MS.gene81471:intron | 50.0% | |
| GTTACAAACCTGAGGAACGG+TGG | - | chr6.4:20464908-20464927 | None:intergenic | 50.0% | |
| GTTGTGTCGGAGCTTTGCTT+TGG | + | chr6.4:20466119-20466138 | MS.gene81471:intron | 50.0% | |
| TAACACCAACCCGTCAACAG+TGG | - | chr6.4:20465518-20465537 | None:intergenic | 50.0% | |
| TCTAAGTGTCCGGCATGTGT+TGG | + | chr6.4:20467300-20467319 | MS.gene81471:intron | 50.0% | |
| TGAAACTCCTTAGGGAGACG+AGG | - | chr6.4:20468482-20468501 | None:intergenic | 50.0% | |
| TGATCATCAGGGATACCCCA+AGG | - | chr6.4:20468398-20468417 | None:intergenic | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr6.4:20464584-20464603 | None:intergenic | 50.0% | |
| TGTCAGACACCAACACATGC+CGG | - | chr6.4:20467312-20467331 | None:intergenic | 50.0% | |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr6.4:20464616-20464635 | MS.gene81471:intron | 50.0% |
| ! | CGGTGTTGAGGAACATGCTT+CGG | - | chr6.4:20468455-20468474 | None:intergenic | 50.0% |
| !! | AGGTGTTGGAGCAATGGAGA+CGG | - | chr6.4:20464074-20464093 | None:intergenic | 50.0% |
| !! | TGACGGGTTGGTGTTATGTC+TGG | + | chr6.4:20465522-20465541 | MS.gene81471:intron | 50.0% |
| AACTCCTTAGGGAGACGAGG+AGG | - | chr6.4:20468479-20468498 | None:intergenic | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6.4:20467428-20467447 | None:intergenic | 55.0% | |
| ACAAACCTGAGGAACGGTGG+CGG | - | chr6.4:20464905-20464924 | None:intergenic | 55.0% | |
| ACAGAGAGGGCCGGGAAAAA+GGG | - | chr6.4:20464481-20464500 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6.4:20467437-20467456 | None:intergenic | 55.0% | |
| CCCCCAATGATAGGAACCCA+TGG | - | chr6.4:20466279-20466298 | None:intergenic | 55.0% | |
| GTCATGGCAGCATCAGCTTC+TGG | + | chr6.4:20465066-20465085 | MS.gene81471:intron | 55.0% | |
| TACAGAGAGGGCCGGGAAAA+AGG | - | chr6.4:20464482-20464501 | None:intergenic | 55.0% | |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6.4:20467429-20467448 | None:intergenic | 60.0% | |
| CCTTAGGGAGACGAGGAGGA+CGG | - | chr6.4:20468475-20468494 | None:intergenic | 60.0% | |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr6.4:20464538-20464557 | MS.gene81471:intron | 60.0% | |
| GGGGATAGCTACCCCTCACT+TGG | + | chr6.4:20464443-20464462 | MS.gene81471:intron | 60.0% | |
| TAAGGAACGGCGGCGGATGA+CGG | - | chr6.4:20464882-20464901 | None:intergenic | 60.0% | |
| ! | AGACGAGGAGGACGGTGTTG+AGG | - | chr6.4:20468467-20468486 | None:intergenic | 60.0% |
| ! | GGAACGGTGGCGGTAAGGAA+CGG | - | chr6.4:20464895-20464914 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6.4:20467419-20467438 | None:intergenic | 60.0% |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6.4:20467418-20467437 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6.4:20467420-20467439 | None:intergenic | 60.0% |
| CCGTCCTCCTCGTCTCCCTA+AGG | + | chr6.4:20468472-20468491 | MS.gene81471:CDS | 65.0% | |
| CCTTACCGCCACCGTTCCTC+AGG | + | chr6.4:20464897-20464916 | MS.gene81471:intron | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | + | chr6.4:20464635-20464654 | MS.gene81471:intron | 65.0% | |
| ! | ACGGTGGCGGTAAGGAACGG+CGG | - | chr6.4:20464892-20464911 | None:intergenic | 65.0% |
| ! | CCTGAGGAACGGTGGCGGTA+AGG | - | chr6.4:20464900-20464919 | None:intergenic | 65.0% |
| ! | GGTGCGACGGCGGCGTTTTA+CGG | - | chr6.4:20464861-20464880 | None:intergenic | 65.0% |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr6.4:20465379-20465398 | None:intergenic | 65.0% |
| GTGGCGGTAAGGAACGGCGG+CGG | - | chr6.4:20464889-20464908 | None:intergenic | 70.0% | |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr6.4:20464546-20464565 | MS.gene81471:intron | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr6.4:20464551-20464570 | MS.gene81471:intron | 75.0% | |
| ! | GGCGGATGACGGTGCGACGG+CGG | - | chr6.4:20464871-20464890 | None:intergenic | 75.0% |
| ! | GGCGGCGGATGACGGTGCGA+CGG | - | chr6.4:20464874-20464893 | None:intergenic | 75.0% |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr6.4:20464554-20464573 | None:intergenic | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr6.4:20464562-20464581 | MS.gene81471:intron | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr6.4:20464564-20464583 | None:intergenic | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr6.4:20464556-20464575 | MS.gene81471:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 20463207 | 20468622 | 20463207 | ID=MS.gene81471 |
| chr6.4 | mRNA | 20463207 | 20468622 | 20463207 | ID=MS.gene81471.t1;Parent=MS.gene81471 |
| chr6.4 | exon | 20463207 | 20463504 | 20463207 | ID=MS.gene81471.t1.exon1;Parent=MS.gene81471.t1 |
| chr6.4 | CDS | 20463207 | 20463504 | 20463207 | ID=cds.MS.gene81471.t1;Parent=MS.gene81471.t1 |
| chr6.4 | exon | 20468387 | 20468622 | 20468387 | ID=MS.gene81471.t1.exon2;Parent=MS.gene81471.t1 |
| chr6.4 | CDS | 20468387 | 20468622 | 20468387 | ID=cds.MS.gene81471.t1;Parent=MS.gene81471.t1 |
| Gene Sequence |
| Protein sequence |
