AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene81635

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81635.t1 MTR_5g085330 97.799 318 7 0 1 318 1 318 0.0 651
MS.gene81635.t1 MTR_3g083370 85.804 317 41 1 2 318 1 313 0.0 574
MS.gene81635.t1 MTR_2g025120 72.414 319 84 2 2 318 1 317 6.37e-179 497
MS.gene81635.t1 MTR_3g083370 88.341 223 26 0 2 224 1 223 1.41e-149 419
MS.gene81635.t1 MTR_2g025120 76.233 223 53 0 2 224 1 223 9.74e-131 371
MS.gene81635.t1 MTR_3g088565 48.875 311 147 3 3 306 1 306 2.42e-105 310
MS.gene81635.t1 MTR_6g092620 47.078 308 148 5 3 306 1 297 9.62e-98 291
MS.gene81635.t1 MTR_4g132770 79.856 139 27 1 155 293 24 161 1.35e-78 237
MS.gene81635.t1 MTR_5g082750 38.019 313 179 6 4 306 48 355 4.14e-69 219
MS.gene81635.t1 MTR_4g015790 34.824 313 190 5 3 305 60 368 2.62e-64 207
MS.gene81635.t1 MTR_3g070860 36.278 317 185 7 3 308 48 358 4.30e-64 206
MS.gene81635.t1 MTR_7g068650 35.783 313 187 6 3 305 52 360 1.25e-63 205
MS.gene81635.t1 MTR_4g132765 64.024 164 58 1 2 165 1 163 1.12e-61 211
MS.gene81635.t1 MTR_3g063180 34.983 303 173 9 5 288 42 339 1.38e-55 184
MS.gene81635.t1 MTR_8g024120 36.986 292 166 9 4 286 41 323 2.05e-55 183
MS.gene81635.t1 MTR_5g055680 31.250 304 195 5 2 298 44 340 9.38e-51 172
MS.gene81635.t1 MTR_0009s0050 31.908 304 193 5 2 298 44 340 3.43e-50 170
MS.gene81635.t1 MTR_0009s0050 31.908 304 193 5 2 298 44 340 4.18e-50 170
MS.gene81635.t1 MTR_8g075890 37.175 269 154 7 5 262 39 303 1.58e-49 169
MS.gene81635.t1 MTR_1g070080 33.784 296 178 5 4 290 37 323 2.36e-49 168
MS.gene81635.t1 MTR_3g092890 33.562 292 174 7 4 286 37 317 2.48e-49 167
MS.gene81635.t1 MTR_8g075830 36.431 269 156 7 5 262 39 303 2.61e-49 168
MS.gene81635.t1 MTR_5g048470 30.132 302 194 6 6 298 54 347 4.31e-49 167
MS.gene81635.t1 MTR_5g048570 31.023 303 195 5 3 298 43 338 8.72e-49 166
MS.gene81635.t1 MTR_5g055690 31.894 301 190 5 6 298 48 341 1.03e-48 166
MS.gene81635.t1 MTR_8g064200 30.033 303 193 6 6 298 58 351 1.82e-48 166
MS.gene81635.t1 MTR_8g064200 30.033 303 193 6 6 298 53 346 1.96e-48 166
MS.gene81635.t1 MTR_0328s0030 31.126 302 192 6 5 298 45 338 9.10e-48 164
MS.gene81635.t1 MTR_5g048550 30.667 300 194 5 6 298 48 340 1.04e-47 164
MS.gene81635.t1 MTR_7g016090 33.333 300 180 7 13 304 46 333 1.21e-47 163
MS.gene81635.t1 MTR_7g062580 32.302 291 183 5 5 288 55 338 1.27e-47 164
MS.gene81635.t1 MTR_7g016090 33.333 300 180 7 13 304 44 331 1.52e-47 163
MS.gene81635.t1 MTR_5g055900 30.592 304 197 5 2 298 44 340 1.57e-47 163
MS.gene81635.t1 MTR_2g083030 31.399 293 171 8 5 286 37 310 2.94e-47 162
MS.gene81635.t1 MTR_5g022020 35.688 269 158 7 5 262 39 303 1.29e-46 161
MS.gene81635.t1 MTR_5g048740 30.921 304 191 7 5 298 45 339 1.53e-46 160
MS.gene81635.t1 MTR_5g065010 32.423 293 184 8 5 289 39 325 1.60e-46 160
MS.gene81635.t1 MTR_7g062550 30.795 302 193 6 5 298 60 353 1.07e-45 159
MS.gene81635.t1 MTR_1g070135 32.852 277 165 5 6 270 39 306 1.87e-45 157
MS.gene81635.t1 MTR_2g072890 30.592 304 197 6 3 298 50 347 3.50e-45 157
MS.gene81635.t1 MTR_5g055820 28.667 300 201 5 6 298 48 341 4.11e-45 157
MS.gene81635.t1 MTR_5g032880 33.916 286 168 6 4 278 37 312 5.04e-45 162
MS.gene81635.t1 MTR_5g032880 33.218 289 174 7 4 278 375 658 5.47e-41 151
MS.gene81635.t1 MTR_2g437380 31.922 307 190 7 4 298 49 348 5.48e-45 157
MS.gene81635.t1 MTR_6g015950 33.228 316 178 7 8 308 39 336 1.10e-44 155
MS.gene81635.t1 MTR_1g033810 32.353 272 171 6 5 267 47 314 1.12e-44 156
MS.gene81635.t1 MTR_1g093110 33.444 302 176 11 3 290 68 358 2.93e-44 155
MS.gene81635.t1 MTR_1g093140 33.555 301 172 12 6 290 74 362 3.33e-44 155
MS.gene81635.t1 MTR_2g069090 33.457 269 161 5 18 275 83 344 3.61e-44 155
MS.gene81635.t1 MTR_2g069010 31.699 306 173 10 3 287 67 357 4.67e-44 155
MS.gene81635.t1 MTR_2g068950 31.132 318 179 11 3 297 61 361 7.22e-44 154
MS.gene81635.t1 MTR_5g048850 28.000 300 202 5 6 298 48 340 1.11e-43 153
MS.gene81635.t1 MTR_2g083000 32.990 291 166 8 6 286 34 305 1.49e-43 152
MS.gene81635.t1 MTR_1g070085 29.693 293 191 7 6 290 38 323 1.99e-43 152
MS.gene81635.t1 MTR_1g070085 29.693 293 191 7 6 290 38 323 1.99e-43 152
MS.gene81635.t1 MTR_3g058610 33.829 269 163 6 5 262 39 303 2.57e-43 152
MS.gene81635.t1 MTR_7g062570 30.719 306 188 7 5 298 55 348 2.81e-43 152
MS.gene81635.t1 MTR_2g069300 32.270 282 174 5 18 290 69 342 3.51e-43 152
MS.gene81635.t1 MTR_2g069190 33.003 303 173 9 6 292 69 357 3.77e-43 152
MS.gene81635.t1 MTR_8g009080 36.066 244 140 6 18 253 109 344 3.94e-43 153
MS.gene81635.t1 MTR_5g005570 30.612 294 175 6 5 288 37 311 4.15e-43 151
MS.gene81635.t1 MTR_2g069060 33.876 307 169 11 3 292 47 336 4.71e-43 151
MS.gene81635.t1 MTR_7g062600 32.246 276 167 6 24 288 69 335 4.97e-43 152
MS.gene81635.t1 MTR_2g069020 33.564 289 158 10 1 269 63 337 5.33e-43 152
MS.gene81635.t1 MTR_0009s0480 30.132 302 195 6 5 298 46 339 6.29e-43 151
MS.gene81635.t1 MTR_7g063730 31.615 291 178 5 19 298 77 357 7.38e-43 151
MS.gene81635.t1 MTR_2g069210 34.266 286 166 10 18 292 79 353 9.29e-43 151
MS.gene81635.t1 MTR_2g069020 33.564 289 158 10 1 269 63 337 1.01e-42 152
MS.gene81635.t1 MTR_5g032870 31.353 303 180 8 4 287 37 330 1.30e-42 150
MS.gene81635.t1 MTR_8g028435 32.119 302 180 9 5 292 60 350 1.59e-42 150
MS.gene81635.t1 MTR_5g011250 32.203 295 183 6 6 287 48 338 1.68e-42 150
MS.gene81635.t1 MTR_2g068960 31.310 313 185 11 3 297 61 361 1.92e-42 150
MS.gene81635.t1 MTR_7g451860 32.192 292 172 8 5 286 41 316 2.03e-42 149
MS.gene81635.t1 MTR_7g047670 32.192 292 172 8 5 286 41 316 2.03e-42 149
MS.gene81635.t1 MTR_1g070120 33.455 275 170 4 4 270 37 306 2.27e-42 149
MS.gene81635.t1 MTR_8g062600 31.699 306 180 12 2 290 64 357 4.22e-42 149
MS.gene81635.t1 MTR_7g105070 31.373 306 190 8 4 298 58 354 4.63e-42 149
MS.gene81635.t1 MTR_4g116010 31.538 260 166 5 2 254 47 301 8.63e-42 148
MS.gene81635.t1 MTR_4g117880 33.798 287 165 9 5 275 60 337 2.19e-41 147
MS.gene81635.t1 MTR_3g117420 29.091 275 183 6 3 268 50 321 3.02e-41 147
MS.gene81635.t1 MTR_2g072910 29.180 305 202 5 2 298 48 346 6.72e-41 146
MS.gene81635.t1 MTR_1g062110 32.639 288 173 7 3 275 64 345 7.92e-41 146
MS.gene81635.t1 MTR_4g093840 32.468 308 185 9 5 299 62 359 1.01e-40 145
MS.gene81635.t1 MTR_8g009170 31.731 312 177 9 5 298 60 353 1.26e-40 145
MS.gene81635.t1 MTR_1g043760 34.783 299 157 10 6 282 55 337 1.66e-40 145
MS.gene81635.t1 MTR_8g074050 30.921 304 193 9 6 300 53 348 2.09e-40 144
MS.gene81635.t1 MTR_8g063070 31.190 311 173 10 3 290 65 357 4.46e-40 144
MS.gene81635.t1 MTR_4g024660 30.065 306 181 11 2 288 64 355 6.71e-40 144
MS.gene81635.t1 MTR_7g056347 30.696 316 179 12 3 298 65 360 9.28e-40 143
MS.gene81635.t1 MTR_8g008930 32.526 289 164 10 6 275 61 337 3.30e-39 142
MS.gene81635.t1 MTR_5g055800 28.383 303 198 7 5 298 47 339 3.76e-39 141
MS.gene81635.t1 MTR_8g009160 30.662 287 173 8 5 275 60 336 5.94e-39 141
MS.gene81635.t1 MTR_5g059130 32.653 294 181 9 3 287 42 327 8.93e-39 140
MS.gene81635.t1 MTR_3g091360 32.491 277 176 5 1 269 48 321 1.00e-38 140
MS.gene81635.t1 MTR_3g026150 30.479 292 189 8 3 287 58 342 1.59e-38 140
MS.gene81635.t1 MTR_8g009110 30.928 291 176 9 1 275 56 337 1.74e-38 140
MS.gene81635.t1 MTR_1g093120 32.119 302 179 10 3 290 65 354 1.94e-38 140
MS.gene81635.t1 MTR_1g034140 30.375 293 177 8 6 278 28 313 1.95e-38 139
MS.gene81635.t1 MTR_8g009090 31.597 288 169 9 5 275 60 336 2.01e-38 139
MS.gene81635.t1 MTR_3g091350 32.028 281 172 6 1 269 55 328 2.78e-38 139
MS.gene81635.t1 MTR_7g045650 34.545 220 134 3 24 236 78 294 3.14e-38 138
MS.gene81635.t1 MTR_4g087120 29.831 295 179 6 6 278 33 321 4.04e-38 139
MS.gene81635.t1 MTR_8g041620 32.646 291 152 11 3 267 66 338 4.72e-38 139
MS.gene81635.t1 MTR_3g045230 32.787 305 166 12 4 290 55 338 6.40e-38 138
MS.gene81635.t1 MTR_7g016080 30.100 299 181 7 13 303 46 324 8.21e-38 137
MS.gene81635.t1 MTR_0009s0050 32.618 233 149 3 68 298 16 242 1.34e-37 134
MS.gene81635.t1 MTR_0009s0050 32.618 233 149 3 68 298 16 242 1.67e-37 134
MS.gene81635.t1 MTR_3g072820 30.872 298 188 8 8 296 42 330 3.83e-37 135
MS.gene81635.t1 MTR_4g087140 30.464 302 175 10 6 278 27 322 4.65e-37 135
MS.gene81635.t1 MTR_3g043900 32.281 285 164 9 20 290 68 337 4.74e-37 135
MS.gene81635.t1 MTR_1g034120 28.053 303 186 7 4 278 25 323 4.75e-37 135
MS.gene81635.t1 MTR_7g081710 32.667 300 181 9 4 292 48 337 5.01e-37 135
MS.gene81635.t1 MTR_4g087110 28.669 293 185 6 6 278 33 321 5.39e-37 135
MS.gene81635.t1 MTR_7g102820 28.028 289 191 4 3 275 65 352 5.99e-37 136
MS.gene81635.t1 MTR_0056s0160 31.250 224 144 4 78 298 9 225 7.66e-37 132
MS.gene81635.t1 MTR_8g074070 29.889 271 178 6 6 267 53 320 7.74e-37 135
MS.gene81635.t1 MTR_7g078010 30.492 305 177 12 3 287 65 354 9.97e-37 135
MS.gene81635.t1 MTR_8g041600 33.096 281 164 11 3 267 66 338 1.03e-36 135
MS.gene81635.t1 MTR_3g464530 30.325 277 160 7 23 286 45 301 1.34e-36 134
MS.gene81635.t1 MTR_1g034060 27.632 304 186 7 4 278 25 323 3.66e-36 133
MS.gene81635.t1 MTR_2g068840 29.245 318 186 11 4 299 54 354 5.07e-36 133
MS.gene81635.t1 MTR_1g043770 32.509 283 173 7 4 275 52 327 5.36e-36 133
MS.gene81635.t1 MTR_8g006930 30.868 311 190 12 3 298 65 365 5.52e-36 133
MS.gene81635.t1 MTR_7g102720 30.693 303 169 10 4 287 36 316 5.56e-36 132
MS.gene81635.t1 MTR_2g102570 28.859 298 188 8 6 291 53 338 1.18e-35 132
MS.gene81635.t1 MTR_4g087090 31.461 267 165 7 14 266 46 308 2.02e-35 131
MS.gene81635.t1 MTR_3g072810 31.000 300 186 8 3 289 38 329 2.20e-35 130
MS.gene81635.t1 MTR_4g119410 30.476 315 174 10 3 292 65 359 3.28e-35 131
MS.gene81635.t1 MTR_5g059140 31.071 280 173 9 3 269 40 312 5.44e-35 130
MS.gene81635.t1 MTR_2g070870 30.108 279 181 6 16 286 33 305 5.58e-35 129
MS.gene81635.t1 MTR_1g070085 33.333 186 117 3 105 290 67 245 8.09e-35 127
MS.gene81635.t1 MTR_3g117485 26.978 278 180 6 22 281 69 341 2.03e-34 129
MS.gene81635.t1 MTR_1g032250 31.208 298 167 9 18 299 85 360 3.13e-34 129
MS.gene81635.t1 MTR_0032s0040 31.148 305 178 13 3 290 68 357 3.77e-34 128
MS.gene81635.t1 MTR_1g032140 29.392 296 156 11 18 287 78 346 4.26e-34 128
MS.gene81635.t1 MTR_5g055690 32.159 227 142 4 6 224 48 270 4.67e-34 126
MS.gene81635.t1 MTR_1g070100 35.542 166 103 2 105 270 63 224 5.42e-34 125
MS.gene81635.t1 MTR_4g074130 31.186 295 170 9 5 286 40 314 5.52e-34 127
MS.gene81635.t1 MTR_1g043810 31.274 259 162 6 4 253 53 304 6.91e-34 127
MS.gene81635.t1 MTR_1g070185 29.508 305 184 8 2 292 66 353 7.32e-34 127
MS.gene81635.t1 MTR_1g043775 32.046 259 160 7 4 253 53 304 7.99e-34 127
MS.gene81635.t1 MTR_3g040410 28.873 284 188 6 18 296 23 297 1.03e-33 126
MS.gene81635.t1 MTR_0009s0050 40.278 144 83 1 155 298 20 160 1.29e-33 122
MS.gene81635.t1 MTR_2g437380 31.418 261 163 6 47 298 1 254 1.48e-33 124
MS.gene81635.t1 MTR_7g029655 31.128 257 159 9 6 253 68 315 2.54e-33 126
MS.gene81635.t1 MTR_8g469400 30.657 274 156 11 33 288 85 342 8.61e-33 124
MS.gene81635.t1 MTR_1g070135 32.468 231 135 5 6 224 39 260 1.76e-32 122
MS.gene81635.t1 MTR_8g074070 28.889 270 163 6 6 267 53 301 3.46e-32 122
MS.gene81635.t1 MTR_2g019370 28.247 308 180 8 9 288 21 315 4.96e-32 122
MS.gene81635.t1 MTR_1g011580 29.057 265 172 6 6 263 64 319 9.31e-32 122
MS.gene81635.t1 MTR_3g117485 26.394 269 175 6 31 281 6 269 1.41e-31 119
MS.gene81635.t1 MTR_5g048850 29.515 227 149 4 6 225 48 270 2.50e-31 119
MS.gene81635.t1 MTR_1g032220 29.000 300 177 9 5 287 73 353 2.58e-31 120
MS.gene81635.t1 MTR_8g033380 26.045 311 201 9 20 311 72 372 4.52e-31 120
MS.gene81635.t1 MTR_7g056393 30.000 310 182 11 3 292 65 359 5.20e-31 120
MS.gene81635.t1 MTR_1g027290 31.615 291 166 13 17 288 44 320 6.97e-31 119
MS.gene81635.t1 MTR_3g026150 32.407 216 138 4 74 287 30 239 7.37e-31 117
MS.gene81635.t1 MTR_4g087130 29.795 292 182 7 6 278 33 320 9.49e-31 119
MS.gene81635.t1 MTR_7g062560 29.276 304 202 7 4 306 61 352 1.15e-30 119
MS.gene81635.t1 MTR_4g087100 29.197 274 154 7 22 267 49 310 4.01e-30 117
MS.gene81635.t1 MTR_8g009120 31.321 265 148 8 24 275 82 325 7.90e-30 116
MS.gene81635.t1 MTR_0009s0480 30.702 228 145 5 5 224 46 268 1.71e-29 114
MS.gene81635.t1 MTR_8g009150 30.566 265 142 9 24 275 82 317 4.49e-29 114
MS.gene81635.t1 MTR_2g069060 33.613 238 128 9 3 224 25 248 5.16e-29 112
MS.gene81635.t1 MTR_1g102070 29.643 280 162 9 25 283 82 347 5.47e-29 114
MS.gene81635.t1 MTR_2g068800 29.839 248 141 8 4 240 54 279 1.21e-28 112
MS.gene81635.t1 MTR_1g048940 26.398 322 212 9 4 311 44 354 1.28e-28 113
MS.gene81635.t1 MTR_8g009080 32.243 214 129 6 18 223 109 314 1.67e-28 112
MS.gene81635.t1 MTR_0009s0400 37.226 137 83 1 163 299 4 137 2.13e-28 107
MS.gene81635.t1 MTR_8g009080 32.227 211 127 6 18 220 109 311 3.75e-28 112
MS.gene81635.t1 MTR_8g093930 25.083 303 203 11 3 289 45 339 3.83e-28 112
MS.gene81635.t1 MTR_2g033270 27.273 308 192 9 3 295 17 307 4.66e-28 111
MS.gene81635.t1 MTR_8g461330 27.742 310 204 8 16 309 32 337 6.66e-28 111
MS.gene81635.t1 MTR_4g115990 28.464 267 169 6 31 292 74 323 2.22e-27 109
MS.gene81635.t1 MTR_7g056353 31.760 233 132 6 40 259 79 297 2.38e-27 112
MS.gene81635.t1 MTR_3g088745 27.922 308 184 13 6 289 37 330 2.45e-27 110
MS.gene81635.t1 MTR_6g464620 26.299 308 183 8 3 283 62 352 5.63e-27 109
MS.gene81635.t1 MTR_1g062110 32.068 237 140 7 3 224 64 294 1.60e-26 107
MS.gene81635.t1 MTR_1g081840 26.071 280 184 11 25 289 76 347 2.08e-26 107
MS.gene81635.t1 MTR_3g464530 30.233 215 130 6 23 224 45 252 2.23e-26 105
MS.gene81635.t1 MTR_3g026150 29.694 229 150 7 3 224 58 282 2.36e-26 105
MS.gene81635.t1 MTR_2g072910 28.205 234 157 4 2 227 48 278 4.54e-26 104
MS.gene81635.t1 MTR_5g025090 25.723 311 198 10 1 299 1 290 4.85e-26 105
MS.gene81635.t1 MTR_8g093980 26.374 273 182 8 25 285 81 346 5.10e-26 106
MS.gene81635.t1 MTR_8g041600 31.197 234 141 9 3 224 66 291 5.85e-26 105
MS.gene81635.t1 MTR_4g096840 25.442 283 178 7 25 286 43 313 6.73e-26 105
MS.gene81635.t1 MTR_8g009170 29.487 234 139 7 5 223 60 282 8.70e-26 104
MS.gene81635.t1 MTR_1g070110 33.889 180 82 3 111 290 76 218 9.32e-26 103
MS.gene81635.t1 MTR_1g043840 37.143 175 96 4 88 252 15 185 1.15e-25 105
MS.gene81635.t1 MTR_8g030880 26.452 310 192 9 1 289 1 295 6.84e-25 102
MS.gene81635.t1 MTR_4g123020 25.081 307 198 9 5 295 20 310 1.11e-24 102
MS.gene81635.t1 MTR_7g078010 30.085 236 139 9 3 224 65 288 1.22e-24 101
MS.gene81635.t1 MTR_1g043770 31.416 226 140 6 6 223 54 272 3.36e-24 100
MS.gene81635.t1 MTR_3g096500 26.298 289 186 10 23 292 87 367 7.33e-24 100
MS.gene81635.t1 MTR_8g009180 35.359 181 109 4 98 275 91 266 7.88e-24 99.4
MS.gene81635.t1 MTR_1g043810 29.694 229 145 6 4 223 53 274 1.57e-23 99.0
MS.gene81635.t1 MTR_1g043775 30.837 227 141 7 6 223 55 274 1.90e-23 98.6
MS.gene81635.t1 MTR_1g086550 27.044 318 194 11 3 295 18 322 1.98e-23 99.0
MS.gene81635.t1 MTR_8g102600 28.617 311 182 13 21 299 25 327 2.42e-23 98.6
MS.gene81635.t1 MTR_6g088665 29.641 334 184 15 5 299 18 339 2.48e-23 98.6
MS.gene81635.t1 MTR_6g088665 29.305 331 188 15 5 299 18 338 4.78e-23 97.8
MS.gene81635.t1 MTR_7g077670 27.143 280 171 10 28 289 31 295 1.23e-22 96.3
MS.gene81635.t1 MTR_5g027230 27.687 307 181 13 4 294 5 286 1.33e-22 95.9
MS.gene81635.t1 MTR_4g100600 28.315 279 170 11 3 260 7 276 7.47e-22 94.4
MS.gene81635.t1 MTR_4g100590 28.364 275 170 11 3 260 7 271 9.43e-21 90.9
MS.gene81635.t1 MTR_1g027310 26.744 258 143 9 17 268 64 281 4.86e-20 89.0
MS.gene81635.t1 MTR_5g025050 24.667 300 195 8 5 293 5 284 6.99e-20 88.6
MS.gene81635.t1 MTR_5g025060 24.913 289 171 10 4 286 5 253 4.41e-18 83.2
MS.gene81635.t1 MTR_4g011720 27.000 300 193 10 5 290 9 296 1.17e-17 82.4
MS.gene81635.t1 MTR_5g024940 26.117 291 167 12 6 286 7 259 1.40e-17 81.6
MS.gene81635.t1 MTR_8g102600 31.553 206 122 9 93 287 63 260 6.74e-16 76.6
MS.gene81635.t1 MTR_1g032240 41.053 95 45 3 163 256 64 148 1.23e-15 73.9
MS.gene81635.t1 MTR_4g011690 27.393 303 189 12 5 290 9 297 1.31e-15 76.6
MS.gene81635.t1 MTR_3g108520 28.342 187 125 6 111 294 125 305 5.02e-15 74.7
MS.gene81635.t1 MTR_3g040440 45.312 64 34 1 174 237 16 78 5.01e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene81635.t1 AT1G05010 73.520 321 79 4 2 316 1 321 1.11e-177 494
MS.gene81635.t1 AT1G12010 69.062 320 92 2 1 318 3 317 4.78e-172 480
MS.gene81635.t1 AT1G62380 68.239 318 94 2 3 318 5 317 1.20e-170 476
MS.gene81635.t1 AT2G19590 46.906 307 149 4 3 307 9 303 6.76e-104 306
MS.gene81635.t1 AT1G77330 48.408 314 143 5 3 306 1 305 2.01e-98 293
MS.gene81635.t1 AT2G19590 47.636 275 130 4 35 307 26 288 7.89e-93 278
MS.gene81635.t1 AT5G05600 35.836 293 174 5 4 286 61 349 1.18e-58 193
MS.gene81635.t1 AT3G11180 34.385 317 189 7 3 311 93 398 5.67e-57 189
MS.gene81635.t1 AT3G11180 34.286 315 185 7 3 301 93 401 5.96e-57 189
MS.gene81635.t1 AT2G38240 33.673 294 183 5 3 289 46 334 2.28e-56 186
MS.gene81635.t1 AT4G10490 35.117 299 182 7 4 295 41 334 9.65e-56 184
MS.gene81635.t1 AT5G24530 33.784 296 179 6 4 290 37 324 7.51e-55 182
MS.gene81635.t1 AT4G16330 36.786 280 155 8 23 288 80 351 9.91e-53 177
MS.gene81635.t1 AT3G55970 35.036 274 167 4 5 267 52 325 3.02e-52 176
MS.gene81635.t1 AT4G10500 32.993 294 176 7 4 286 43 326 1.20e-50 171
MS.gene81635.t1 AT1G78550 31.561 301 192 6 6 298 54 348 1.21e-50 171
MS.gene81635.t1 AT3G51240 37.175 269 154 7 5 262 38 302 4.56e-49 167
MS.gene81635.t1 AT1G17010 32.872 289 170 5 1 274 50 329 5.89e-47 162
MS.gene81635.t1 AT1G17020 32.192 292 186 5 3 286 51 338 1.30e-45 158
MS.gene81635.t1 AT4G25310 33.333 273 167 5 22 287 70 334 2.56e-44 155
MS.gene81635.t1 AT5G20400 30.303 297 195 6 3 290 43 336 4.00e-44 154
MS.gene81635.t1 AT4G25300 30.928 291 188 5 4 286 51 336 9.61e-44 154
MS.gene81635.t1 AT1G06620 32.680 306 182 8 3 295 60 354 1.51e-43 153
MS.gene81635.t1 AT4G21200 35.849 265 149 9 6 260 43 296 5.00e-43 151
MS.gene81635.t1 AT4G16330 39.614 207 115 5 85 288 46 245 6.21e-43 149
MS.gene81635.t1 AT1G49390 29.412 289 193 5 3 282 43 329 3.80e-42 149
MS.gene81635.t1 AT3G12900 31.399 293 174 9 8 287 59 337 4.99e-42 149
MS.gene81635.t1 AT5G08640 31.849 292 181 8 6 286 41 325 5.82e-42 148
MS.gene81635.t1 AT5G08640 31.849 292 181 8 6 286 41 325 5.82e-42 148
MS.gene81635.t1 AT1G78550 30.147 272 177 5 34 298 5 270 6.05e-41 144
MS.gene81635.t1 AT2G30830 33.948 271 160 7 16 275 68 330 7.66e-41 146
MS.gene81635.t1 AT4G22880 30.605 281 181 5 18 288 63 339 1.66e-40 145
MS.gene81635.t1 AT4G22880 30.605 281 181 5 18 288 63 339 1.66e-40 145
MS.gene81635.t1 AT4G22880 30.605 281 181 5 18 288 63 339 1.66e-40 145
MS.gene81635.t1 AT3G19010 31.973 294 175 6 6 278 29 318 8.26e-40 143
MS.gene81635.t1 AT3G19010 31.973 294 175 6 6 278 29 318 8.26e-40 143
MS.gene81635.t1 AT5G20550 30.216 278 182 5 2 269 42 317 8.44e-40 143
MS.gene81635.t1 AT3G21420 30.657 274 176 6 6 268 56 326 2.28e-39 142
MS.gene81635.t1 AT5G05600 33.766 231 142 4 4 224 61 290 3.38e-39 140
MS.gene81635.t1 AT3G61400 33.224 304 178 12 3 292 65 357 4.16e-39 142
MS.gene81635.t1 AT1G55290 29.530 298 182 10 4 288 61 343 5.05e-39 141
MS.gene81635.t1 AT5G59540 31.457 302 183 10 3 290 59 350 5.20e-39 141
MS.gene81635.t1 AT1G04350 32.394 284 172 10 6 277 59 334 5.91e-39 141
MS.gene81635.t1 AT1G15550 28.523 298 194 7 4 292 56 343 9.48e-39 140
MS.gene81635.t1 AT3G13610 30.000 280 173 9 23 290 77 345 1.31e-38 140
MS.gene81635.t1 AT5G59530 31.373 306 179 10 3 290 56 348 1.54e-38 140
MS.gene81635.t1 AT1G03410 32.990 291 166 12 3 275 55 334 1.73e-38 140
MS.gene81635.t1 AT1G03410 32.877 292 165 13 3 275 92 371 3.42e-38 140
MS.gene81635.t1 AT5G63590 32.203 295 180 9 3 286 12 297 3.69e-38 137
MS.gene81635.t1 AT5G43450 29.904 311 194 11 1 299 57 355 3.71e-38 139
MS.gene81635.t1 AT3G55970 32.759 232 145 4 4 224 51 282 3.72e-38 137
MS.gene81635.t1 AT2G36690 28.797 316 201 7 3 308 59 360 5.79e-38 138
MS.gene81635.t1 AT2G36690 28.797 316 201 7 3 308 59 360 5.79e-38 138
MS.gene81635.t1 AT5G54000 29.740 269 178 6 3 262 44 310 1.11e-37 137
MS.gene81635.t1 AT1G80340 29.603 277 182 6 25 292 64 336 2.16e-37 136
MS.gene81635.t1 AT5G43440 30.721 319 179 11 3 299 60 358 3.51e-37 136
MS.gene81635.t1 AT3G19000 31.579 304 179 9 6 287 33 329 6.19e-37 135
MS.gene81635.t1 AT1G06650 29.630 297 181 10 14 298 76 356 1.36e-36 135
MS.gene81635.t1 AT3G51240 40.884 181 99 4 86 262 42 218 2.78e-36 132
MS.gene81635.t1 AT2G30840 31.944 288 174 10 16 292 72 348 3.41e-36 134
MS.gene81635.t1 AT1G49390 29.365 252 169 4 38 282 1 250 8.90e-36 130
MS.gene81635.t1 AT1G04380 32.890 301 169 11 6 290 46 329 1.32e-35 132
MS.gene81635.t1 AT5G63595 31.679 262 151 9 4 260 24 262 4.43e-35 129
MS.gene81635.t1 AT5G54000 30.603 232 152 5 38 262 1 230 8.34e-34 125
MS.gene81635.t1 AT1G06640 30.120 249 157 6 14 253 76 316 1.07e-33 127
MS.gene81635.t1 AT3G19010 31.317 281 166 8 5 278 28 288 1.51e-33 125
MS.gene81635.t1 AT2G25450 32.959 267 158 9 16 269 68 326 4.63e-33 125
MS.gene81635.t1 AT1G03400 34.016 244 138 9 22 253 67 299 7.28e-33 124
MS.gene81635.t1 AT4G25310 29.670 273 149 5 22 287 70 306 2.31e-32 122
MS.gene81635.t1 AT1G06645 29.655 290 176 11 16 292 91 365 3.02e-32 123
MS.gene81635.t1 AT5G63600 29.670 273 176 7 22 287 47 310 3.12e-32 122
MS.gene81635.t1 AT2G30840 31.379 290 167 11 16 292 72 342 4.28e-32 122
MS.gene81635.t1 AT3G60290 30.068 296 186 10 3 287 50 335 1.61e-31 121
MS.gene81635.t1 AT5G63600 29.927 274 175 8 22 287 47 311 1.94e-31 120
MS.gene81635.t1 AT5G07480 31.734 271 158 9 6 257 45 307 4.02e-31 120
MS.gene81635.t1 AT1G50960 29.070 258 173 5 3 254 38 291 4.53e-31 119
MS.gene81635.t1 AT1G60980 28.169 284 173 9 25 289 80 351 5.54e-31 120
MS.gene81635.t1 AT2G44800 27.848 316 208 9 4 309 51 356 1.23e-30 119
MS.gene81635.t1 AT4G25300 34.463 177 111 2 111 287 72 243 1.23e-30 116
MS.gene81635.t1 AT5G07200 28.169 284 176 9 25 289 81 355 2.01e-30 119
MS.gene81635.t1 AT1G80330 28.094 299 192 8 4 289 48 336 2.38e-30 118
MS.gene81635.t1 AT1G44090 28.477 302 196 8 3 289 61 357 3.98e-30 118
MS.gene81635.t1 AT1G06620 31.169 231 141 6 4 224 61 283 2.47e-29 114
MS.gene81635.t1 AT4G21690 27.018 285 184 8 25 292 61 338 7.26e-29 114
MS.gene81635.t1 AT3G19000 29.719 249 149 8 6 232 33 277 9.71e-29 112
MS.gene81635.t1 AT3G61400 32.759 232 138 9 3 224 65 288 2.62e-28 111
MS.gene81635.t1 AT3G19010 30.864 243 143 6 6 227 29 267 3.78e-28 110
MS.gene81635.t1 AT5G51810 26.974 304 193 9 3 289 61 352 4.19e-28 112
MS.gene81635.t1 AT1G78440 26.936 297 193 9 5 286 15 302 4.63e-28 111
MS.gene81635.t1 AT3G47190 30.496 282 155 10 3 260 30 294 5.64e-28 111
MS.gene81635.t1 AT1G03400 30.657 274 139 10 20 253 65 327 1.69e-27 110
MS.gene81635.t1 AT4G25420 25.246 305 201 8 3 289 59 354 2.67e-27 110
MS.gene81635.t1 AT5G43450 29.310 232 146 8 1 223 57 279 5.12e-27 107
MS.gene81635.t1 AT4G23340 28.070 285 162 9 28 289 30 294 1.62e-26 107
MS.gene81635.t1 AT5G58660 27.931 290 167 11 3 260 32 311 8.51e-26 105
MS.gene81635.t1 AT2G30840 30.556 216 134 6 16 223 72 279 1.05e-25 104
MS.gene81635.t1 AT1G06650 28.311 219 139 7 14 223 76 285 1.45e-25 104
MS.gene81635.t1 AT5G12270 42.424 132 70 4 163 290 214 343 2.17e-25 104
MS.gene81635.t1 AT1G06640 28.000 225 146 5 14 230 76 292 2.92e-25 103
MS.gene81635.t1 AT1G30040 27.737 274 182 9 24 286 44 312 9.39e-25 102
MS.gene81635.t1 AT5G59540 29.185 233 147 8 3 224 59 284 9.51e-25 101
MS.gene81635.t1 AT5G43935 28.975 283 156 10 28 294 39 292 2.12e-24 100
MS.gene81635.t1 AT3G49620 27.682 289 183 8 20 287 59 342 2.56e-24 101
MS.gene81635.t1 AT1G06640 28.372 215 138 5 14 220 76 282 3.95e-24 99.8
MS.gene81635.t1 AT5G43440 30.579 242 128 11 3 223 60 282 1.00e-23 99.0
MS.gene81635.t1 AT3G50210 24.224 322 200 8 4 287 7 322 3.01e-23 98.2
MS.gene81635.t1 AT3G50210 24.224 322 200 8 4 287 7 322 3.01e-23 98.2
MS.gene81635.t1 AT3G50210 24.224 322 200 8 4 287 7 322 3.01e-23 98.2
MS.gene81635.t1 AT2G34555 26.897 290 171 9 20 286 36 307 7.19e-23 97.4
MS.gene81635.t1 AT5G51310 25.850 294 181 10 21 289 18 299 8.04e-23 97.1
MS.gene81635.t1 AT1G02400 27.103 321 200 14 4 306 23 327 8.17e-23 97.1
MS.gene81635.t1 AT5G63580 31.897 232 144 7 1 224 15 240 1.30e-22 94.7
MS.gene81635.t1 AT5G07480 34.021 194 105 6 74 257 18 198 1.32e-22 94.7
MS.gene81635.t1 AT5G63580 32.174 230 142 7 1 222 15 238 2.26e-22 94.4
MS.gene81635.t1 AT1G04380 30.303 231 136 8 6 224 46 263 2.55e-22 94.7
MS.gene81635.t1 AT3G49630 26.644 289 186 8 20 287 34 317 6.84e-22 94.7
MS.gene81635.t1 AT3G49630 26.644 289 186 8 20 287 30 313 7.92e-22 94.4
MS.gene81635.t1 AT1G14130 25.249 301 206 8 5 299 9 296 3.61e-19 86.7
MS.gene81635.t1 AT1G47990 24.684 316 193 10 4 295 14 308 5.46e-19 86.3
MS.gene81635.t1 AT4G23340 31.313 198 119 8 115 305 1 188 6.84e-19 84.0
MS.gene81635.t1 AT5G58660 26.087 253 146 10 3 224 32 274 2.97e-18 83.6
MS.gene81635.t1 AT3G49630 31.053 190 122 5 102 287 60 244 4.36e-18 82.8
MS.gene81635.t1 AT3G46500 25.784 287 186 10 21 287 30 309 1.86e-17 82.0
MS.gene81635.t1 AT1G52820 24.653 288 179 8 21 290 32 299 2.32e-16 78.6
MS.gene81635.t1 AT5G51810 26.446 242 152 8 3 227 61 293 2.39e-16 78.6
MS.gene81635.t1 AT3G50210 27.979 193 130 4 102 287 50 240 2.87e-16 77.4
MS.gene81635.t1 AT1G14120 25.692 253 172 6 5 251 8 250 4.17e-16 77.8
MS.gene81635.t1 AT1G14120 25.692 253 172 6 5 251 8 250 4.17e-16 77.8
MS.gene81635.t1 AT1G14120 25.692 253 172 6 5 251 8 250 4.17e-16 77.8
MS.gene81635.t1 AT1G35190 26.000 300 176 11 2 264 1 291 2.93e-15 75.9
MS.gene81635.t1 AT3G46500 25.591 254 165 9 21 254 30 279 3.91e-14 72.0
MS.gene81635.t1 AT4G22870 34.375 96 59 2 193 287 2 94 7.24e-14 67.4
MS.gene81635.t1 AT4G03070 29.944 177 115 5 118 290 133 304 1.75e-12 67.4
MS.gene81635.t1 AT4G16765 27.568 185 110 8 110 283 58 229 2.72e-12 65.9
MS.gene81635.t1 AT4G16765 27.225 191 116 8 110 288 58 237 3.48e-12 65.9
MS.gene81635.t1 AT4G16765 27.225 191 116 8 110 288 58 237 3.48e-12 65.9
MS.gene81635.t1 AT4G16765 27.225 191 116 8 110 288 58 237 3.48e-12 65.9
MS.gene81635.t1 AT3G46480 34.783 138 72 7 174 300 156 286 2.47e-11 63.9

Find 93 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTCTTCAAACACAAATTT+TGG 0.052810 5.1:+67205636 None:intergenic
GAAAGAATCAAATGTTAATT+TGG 0.112620 5.1:-67205556 MS.gene81635:CDS
AATTAACATTTGATTCTTTC+AGG 0.123673 5.1:+67205559 None:intergenic
AGTCTCTCCAAGCTAATAAT+TGG 0.197037 5.1:+67207286 None:intergenic
CCCTTCACCAGCTCTGGATT+TGG 0.233913 5.1:+67206520 None:intergenic
ATCTCTGAAATGTTTGATTC+AGG 0.255183 5.1:+67206902 None:intergenic
GAAACTAGCTGAAGAGCTTT+TGG 0.274065 5.1:-67206650 MS.gene81635:CDS
ATGCATGGAGCATAGGTTTA+AGG 0.281531 5.1:-67207011 MS.gene81635:CDS
TCTTTCAGGGCTTCAAATCT+TGG 0.295919 5.1:+67205573 None:intergenic
TAAGGATGCTTGTGAGAATT+GGG 0.296497 5.1:-67207227 MS.gene81635:CDS
AGAGAAAGGTTACCTTAAAA+AGG 0.302113 5.1:-67206602 MS.gene81635:CDS
TGGTATACCCCATGACCTTA+TGG 0.305963 5.1:-67207071 MS.gene81635:CDS
TTAAGGATGCTTGTGAGAAT+TGG 0.311709 5.1:-67207228 MS.gene81635:CDS
CCTTCACCAGCTCTGGATTT+GGG 0.325710 5.1:+67206521 None:intergenic
GCATTTCCTATAGTGCTCTT+TGG 0.346722 5.1:+67207030 None:intergenic
GGATCAAGAGGACCAACTTT+TGG 0.347061 5.1:-67206571 MS.gene81635:CDS
CCAAACTGAGGTCAAAGATA+TGG 0.350187 5.1:-67206957 MS.gene81635:CDS
CCATATCTTTGACCTCAGTT+TGG 0.352945 5.1:+67206957 None:intergenic
CAACAATAGAGTGGCGCATT+GGG 0.358833 5.1:+67206395 None:intergenic
AAAGAATCAAATGTTAATTT+GGG 0.360868 5.1:-67205555 MS.gene81635:CDS
CTACCCTGCGCCAGAATTGT+TGG 0.366182 5.1:-67205691 MS.gene81635:CDS
TTTCATTAAACAATTGCAAT+TGG 0.371062 5.1:+67205531 None:intergenic
AGACACCATGGAGAAAATTA+AGG 0.373733 5.1:-67207245 MS.gene81635:CDS
AGGAATCATCCTTCTCTTCC+AGG 0.379674 5.1:-67206473 MS.gene81635:CDS
TGAGAATTGGGGATTCTTTG+AGG 0.409466 5.1:-67207215 MS.gene81635:intron
CGAAGACCCTTCACCAGCTC+TGG 0.409771 5.1:+67206514 None:intergenic
ATTTGGGCATTGAGGGTAGT+TGG 0.418782 5.1:+67206537 None:intergenic
GAATTTCCCAATTATTAGCT+TGG 0.421006 5.1:-67207293 MS.gene81635:CDS
GGTTGACCAAAGAGCACTAT+AGG 0.423088 5.1:-67207036 MS.gene81635:CDS
GGCCATCTTTGAGCAATTGT+AGG 0.439962 5.1:+67206434 None:intergenic
CCTTCTCTTCCAGGATGATA+AGG 0.441979 5.1:-67206464 MS.gene81635:CDS
CTGAGGTCAAAGATATGGAT+TGG 0.449050 5.1:-67206952 MS.gene81635:CDS
ATTAACATTTGATTCTTTCA+GGG 0.452549 5.1:+67205560 None:intergenic
GCTCTGGATTTGGGCATTGA+GGG 0.456238 5.1:+67206530 None:intergenic
GATGTGTTATGTGAGAATCT+TGG 0.458480 5.1:-67206628 MS.gene81635:CDS
GTCTCTCCAAGCTAATAATT+GGG 0.458528 5.1:+67207287 None:intergenic
TCTCTGAAATGTTTGATTCA+GGG 0.461275 5.1:+67206903 None:intergenic
TTGAGGGTAGTTGGCTACCT+TGG 0.468721 5.1:+67206546 None:intergenic
TACAAACAGGTAATAACAAA+TGG 0.471726 5.1:-67205810 MS.gene81635:intron
CAAATCTTGGTTCCTTAGCA+TGG 0.476462 5.1:+67205586 None:intergenic
ACCTCTCCAATGTGTCCATA+AGG 0.477763 5.1:+67207056 None:intergenic
AGCTCTGGATTTGGGCATTG+AGG 0.479340 5.1:+67206529 None:intergenic
CTGATCTCAGTGATGAATAC+AGG 0.479662 5.1:-67206877 MS.gene81635:intron
TAGATTACAGCATCACTGCC+AGG 0.480283 5.1:+67205711 None:intergenic
CACTCTATTGTTGTCAACCT+TGG 0.486458 5.1:-67206385 MS.gene81635:CDS
CTTCGTGCTCACACCGATGC+CGG 0.487587 5.1:-67206496 MS.gene81635:CDS
GCTACCTTGGTGCCAAAAGT+TGG 0.489227 5.1:+67206559 None:intergenic
CGTGTGATAGCACAAACAAA+TGG 0.493222 5.1:-67205765 MS.gene81635:CDS
TGCTTTGAAATTCCATGCTA+AGG 0.494834 5.1:-67205598 MS.gene81635:CDS
ATTAGCTTGGAGAGACTCAA+TGG 0.496831 5.1:-67207280 MS.gene81635:CDS
TGAGGTCAAAGATATGGATT+GGG 0.504452 5.1:-67206951 MS.gene81635:CDS
CCAATGTGTCCATAAGGTCA+TGG 0.507048 5.1:+67207062 None:intergenic
GAAACAAATTTACCTCAAGT+TGG 0.510428 5.1:+67206359 None:intergenic
CAATGTGTCCATAAGGTCAT+GGG 0.512658 5.1:+67207063 None:intergenic
ACAACAATAGAGTGGCGCAT+TGG 0.513038 5.1:+67206394 None:intergenic
AAGGATGCTTGTGAGAATTG+GGG 0.513241 5.1:-67207226 MS.gene81635:CDS
CTGTATTCATCACTGAGATC+AGG 0.514220 5.1:+67206878 None:intergenic
AAACTCTAGCTGGTGAATCA+TGG 0.516202 5.1:-67207091 MS.gene81635:intron
GGCCTACAATTGCTCAAAGA+TGG 0.522007 5.1:-67206436 MS.gene81635:CDS
GAAGAGAAGGATGATTCCTC+CGG 0.529315 5.1:+67206477 None:intergenic
CCTTATCATCCTGGAAGAGA+AGG 0.530340 5.1:+67206464 None:intergenic
GGCCACTGACCTTATCATCC+TGG 0.531916 5.1:+67206455 None:intergenic
ATTCAGGGAGGTGTCGAACA+TGG 0.534849 5.1:+67206918 None:intergenic
CATTTGTTTGTGCTATCACA+CGG 0.538854 5.1:+67205766 None:intergenic
CCCAAATCCAGAGCTGGTGA+AGG 0.554109 5.1:-67206521 MS.gene81635:CDS
ATAGGAAATGCATGGAGCAT+AGG 0.560098 5.1:-67207018 MS.gene81635:CDS
GAGAATCTTGGACTAGAGAA+AGG 0.561460 5.1:-67206616 MS.gene81635:CDS
AAGGATGATTCCTCCGGCAT+CGG 0.565016 5.1:+67206483 None:intergenic
CCATGACCTTATGGACACAT+TGG 0.572011 5.1:-67207062 MS.gene81635:CDS
AACAATAGAGTGGCGCATTG+GGG 0.574691 5.1:+67206396 None:intergenic
ATAGCGTCATTCTACAACCC+TGG 0.576177 5.1:-67205729 MS.gene81635:CDS
TGTGTACAGGAAAGTGATGA+AGG 0.591980 5.1:-67206692 MS.gene81635:intron
TCAATGCCCAAATCCAGAGC+TGG 0.593557 5.1:-67206527 MS.gene81635:CDS
AGGGAGGTGTCGAACATGGA+AGG 0.597100 5.1:+67206922 None:intergenic
CAACCTTGGTGACCAACTTG+AGG 0.598103 5.1:-67206371 MS.gene81635:intron
AAGGAAGTAATATCAAGCAA+AGG 0.598298 5.1:-67206992 MS.gene81635:CDS
AGGGTTGTAGAATGACGCTA+TGG 0.623307 5.1:+67205731 None:intergenic
CCAAATCCAGAGCTGGTGAA+GGG 0.626529 5.1:-67206520 MS.gene81635:CDS
TTACCTCAAGTTGGTCACCA+AGG 0.629532 5.1:+67206368 None:intergenic
AGAGCACTATAGGAAATGCA+TGG 0.631438 5.1:-67207026 MS.gene81635:CDS
AGATTACAGCATCACTGCCA+GGG 0.635180 5.1:+67205712 None:intergenic
TTCCAGGATGATAAGGTCAG+TGG 0.639547 5.1:-67206457 MS.gene81635:CDS
AAATGGCAAGTACAAGAGTG+TGG 0.640556 5.1:-67205793 MS.gene81635:CDS
TTTCCAACAATTCTGGCGCA+GGG 0.642524 5.1:+67205688 None:intergenic
CGTGCTCACACCGATGCCGG+AGG 0.645285 5.1:-67206493 MS.gene81635:CDS
ACAATAGAGTGGCGCATTGG+GGG 0.650237 5.1:+67206397 None:intergenic
AATTGCTCAAAGATGGCCAG+TGG 0.660439 5.1:-67206429 MS.gene81635:CDS
CAAGGTTGACAACAATAGAG+TGG 0.673016 5.1:+67206386 None:intergenic
CTTAGATGCTGTCCAAACTG+AGG 0.673374 5.1:-67206969 MS.gene81635:CDS
CTGAAATGTTTGATTCAGGG+AGG 0.675587 5.1:+67206906 None:intergenic
ACCTTATGGACACATTGGAG+AGG 0.684850 5.1:-67207057 MS.gene81635:CDS
AATGTGTCCATAAGGTCATG+GGG 0.688791 5.1:+67207064 None:intergenic
TGTTGAGAGAAAAGACACCA+TGG 0.692596 5.1:-67207257 MS.gene81635:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATAAAAATATATTTA+AGG + chr5.1:67205676-67205695 None:intergenic 0.0%
!! AATTATAAAAATATATTTAA+GGG + chr5.1:67205675-67205694 None:intergenic 0.0%
!! AAAGAATCAAATGTTAATTT+GGG - chr5.1:67207282-67207301 MS.gene81635:CDS 15.0%
!!! ATATTAGTGTCTAATATTTT+TGG + chr5.1:67206908-67206927 None:intergenic 15.0%
!!! GTTATTATTTTTTTTTTTGC+AGG + chr5.1:67206706-67206725 None:intergenic 15.0%
!! AATTAACATTTGATTCTTTC+AGG + chr5.1:67207281-67207300 None:intergenic 20.0%
!! ATTAACATTTGATTCTTTCA+GGG + chr5.1:67207280-67207299 None:intergenic 20.0%
!! CTAAATCTTGATTATATTGA+CGG - chr5.1:67206653-67206672 MS.gene81635:CDS 20.0%
!! CTAATATGAAAAATCATCTA+AGG - chr5.1:67206921-67206940 MS.gene81635:CDS 20.0%
!! GAAAGAATCAAATGTTAATT+TGG - chr5.1:67207281-67207300 MS.gene81635:CDS 20.0%
!! TCATGATTCTAAATTTCTTA+TGG - chr5.1:67206116-67206135 MS.gene81635:intron 20.0%
!! TTTGAAAATTTGATCTTTGA+CGG + chr5.1:67206738-67206757 None:intergenic 20.0%
!!! AAAGATCAAATTTTCAAACT+TGG - chr5.1:67206740-67206759 MS.gene81635:intron 20.0%
! AAGGGTTGTTAAACAATTTA+TGG + chr5.1:67206596-67206615 None:intergenic 25.0%
! TACAAACAGGTAATAACAAA+TGG - chr5.1:67207027-67207046 MS.gene81635:CDS 25.0%
! TGAAAAATCATCTAAGGATA+CGG - chr5.1:67206927-67206946 MS.gene81635:CDS 25.0%
! TGCTTCTACAAAATCATATA+TGG + chr5.1:67206075-67206094 None:intergenic 25.0%
!! ACTCTTCAAACACAAATTTT+GGG + chr5.1:67207203-67207222 None:intergenic 25.0%
!! ATCCATAAAATGCCTTTTTA+AGG + chr5.1:67206250-67206269 None:intergenic 25.0%
!! GTTAGATAAAGTTACTTTCT+TGG - chr5.1:67205696-67205715 MS.gene81635:CDS 25.0%
!! TACTCTTCAAACACAAATTT+TGG + chr5.1:67207204-67207223 None:intergenic 25.0%
!!! CTAATATTTTTGGTCACATT+AGG + chr5.1:67206898-67206917 None:intergenic 25.0%
!!! TACCTTAAAAAGGCATTTTA+TGG - chr5.1:67206245-67206264 MS.gene81635:intron 25.0%
AAGGAAGTAATATCAAGCAA+AGG - chr5.1:67205845-67205864 MS.gene81635:intron 30.0%
AGAGAAAGGTTACCTTAAAA+AGG - chr5.1:67206235-67206254 MS.gene81635:intron 30.0%
ATCTTTCATGTGCAAAAAAC+AGG - chr5.1:67206978-67206997 MS.gene81635:CDS 30.0%
CGTAAAAAATTTGACTGCAA+AGG - chr5.1:67206840-67206859 MS.gene81635:intron 30.0%
CTTATGTCAAATCTTGTGTA+TGG + chr5.1:67206868-67206887 None:intergenic 30.0%
GAAACAAATTTACCTCAAGT+TGG + chr5.1:67206481-67206500 None:intergenic 30.0%
GAATTTCCCAATTATTAGCT+TGG - chr5.1:67205544-67205563 MS.gene81635:CDS 30.0%
! CACTACTATTTTGTACAAAC+AGG - chr5.1:67207014-67207033 MS.gene81635:CDS 30.0%
! TGATGAAGGATTTTTCTTTG+AGG - chr5.1:67206159-67206178 MS.gene81635:intron 30.0%
!! ATCTCTGAAATGTTTGATTC+AGG + chr5.1:67205938-67205957 None:intergenic 30.0%
!! TCTCTGAAATGTTTGATTCA+GGG + chr5.1:67205937-67205956 None:intergenic 30.0%
!! TTTGTTTTCAAAACTCTAGC+TGG - chr5.1:67205736-67205755 MS.gene81635:CDS 30.0%
AATTGAAGTGAGAGTTGACT+TGG + chr5.1:67206509-67206528 None:intergenic 35.0%
AGACACCATGGAGAAAATTA+AGG - chr5.1:67205592-67205611 MS.gene81635:CDS 35.0%
AGTCTCTCCAAGCTAATAAT+TGG + chr5.1:67205554-67205573 None:intergenic 35.0%
AGTGTAAAGTGAGAAAGTCA+AGG + chr5.1:67206615-67206634 None:intergenic 35.0%
ATTGTTGGAAAAACATGCAG+AGG - chr5.1:67207161-67207180 MS.gene81635:intron 35.0%
CATTTGTTTGTGCTATCACA+CGG + chr5.1:67207074-67207093 None:intergenic 35.0%
CTTATGGTAATTGTGTGTAC+AGG - chr5.1:67206132-67206151 MS.gene81635:intron 35.0%
GATGTGTTATGTGAGAATCT+TGG - chr5.1:67206209-67206228 MS.gene81635:intron 35.0%
GTCTCTCCAAGCTAATAATT+GGG + chr5.1:67205553-67205572 None:intergenic 35.0%
GTGTAAAGTGAGAAAGTCAA+GGG + chr5.1:67206614-67206633 None:intergenic 35.0%
TAAGGATGCTTGTGAGAATT+GGG - chr5.1:67205610-67205629 MS.gene81635:CDS 35.0%
TCCATATTAATCCTTCGATC+TGG - chr5.1:67206548-67206567 MS.gene81635:CDS 35.0%
TCTCAATTCGTCAAAATACC+TGG - chr5.1:67206814-67206833 MS.gene81635:intron 35.0%
TGAGGTCAAAGATATGGATT+GGG - chr5.1:67205886-67205905 MS.gene81635:intron 35.0%
TTAAGGATGCTTGTGAGAAT+TGG - chr5.1:67205609-67205628 MS.gene81635:CDS 35.0%
TTACACTTTACTCACGTTAG+AGG - chr5.1:67206628-67206647 MS.gene81635:CDS 35.0%
TTTGACGAATTGAGATCAGA+CGG + chr5.1:67206809-67206828 None:intergenic 35.0%
! AGCATCCTTAATTTTCTCCA+TGG + chr5.1:67205600-67205619 None:intergenic 35.0%
! GCATGTTTTTCCAACAATTC+TGG + chr5.1:67207159-67207178 None:intergenic 35.0%
!! AAGGCATTTTATGGATCAAG+AGG - chr5.1:67206254-67206273 MS.gene81635:intron 35.0%
!! TGCTTTGAAATTCCATGCTA+AGG - chr5.1:67207239-67207258 MS.gene81635:CDS 35.0%
!!! GTCAAATTTTTTACGCATCC+AGG + chr5.1:67206835-67206854 None:intergenic 35.0%
!!! TTTTTTTGCAGGCTACAACA+CGG + chr5.1:67206695-67206714 None:intergenic 35.0%
AAACTCTAGCTGGTGAATCA+TGG - chr5.1:67205746-67205765 MS.gene81635:CDS 40.0%
AAATGGCAAGTACAAGAGTG+TGG - chr5.1:67207044-67207063 MS.gene81635:CDS 40.0%
AAGGATGCTTGTGAGAATTG+GGG - chr5.1:67205611-67205630 MS.gene81635:CDS 40.0%
AATGTGTCCATAAGGTCATG+GGG + chr5.1:67205776-67205795 None:intergenic 40.0%
ATAGGAAATGCATGGAGCAT+AGG - chr5.1:67205819-67205838 MS.gene81635:intron 40.0%
ATGCATGGAGCATAGGTTTA+AGG - chr5.1:67205826-67205845 MS.gene81635:intron 40.0%
CAAATCTTGGTTCCTTAGCA+TGG + chr5.1:67207254-67207273 None:intergenic 40.0%
CAAGGTTGACAACAATAGAG+TGG + chr5.1:67206454-67206473 None:intergenic 40.0%
CAATGTGTCCATAAGGTCAT+GGG + chr5.1:67205777-67205796 None:intergenic 40.0%
CACTCTATTGTTGTCAACCT+TGG - chr5.1:67206452-67206471 MS.gene81635:CDS 40.0%
CCAAACTGAGGTCAAAGATA+TGG - chr5.1:67205880-67205899 MS.gene81635:intron 40.0%
CCATATCTTTGACCTCAGTT+TGG + chr5.1:67205883-67205902 None:intergenic 40.0%
CGTGTGATAGCACAAACAAA+TGG - chr5.1:67207072-67207091 MS.gene81635:CDS 40.0%
CTGAAATGTTTGATTCAGGG+AGG + chr5.1:67205934-67205953 None:intergenic 40.0%
CTGAGGTCAAAGATATGGAT+TGG - chr5.1:67205885-67205904 MS.gene81635:intron 40.0%
CTGATCTCAGTGATGAATAC+AGG - chr5.1:67205960-67205979 MS.gene81635:intron 40.0%
CTGTATTCATCACTGAGATC+AGG + chr5.1:67205962-67205981 None:intergenic 40.0%
GCATTTCCTATAGTGCTCTT+TGG + chr5.1:67205810-67205829 None:intergenic 40.0%
GCCAGATCGAAGGATTAATA+TGG + chr5.1:67206552-67206571 None:intergenic 40.0%
TCTTTCAGGGCTTCAAATCT+TGG + chr5.1:67207267-67207286 None:intergenic 40.0%
TGAGAATTGGGGATTCTTTG+AGG - chr5.1:67205622-67205641 MS.gene81635:CDS 40.0%
TGTGTACAGGAAAGTGATGA+AGG - chr5.1:67206145-67206164 MS.gene81635:intron 40.0%
TGTTGAGAGAAAAGACACCA+TGG - chr5.1:67205580-67205599 MS.gene81635:CDS 40.0%
! AGAGCACTATAGGAAATGCA+TGG - chr5.1:67205811-67205830 MS.gene81635:intron 40.0%
! ATTAGCTTGGAGAGACTCAA+TGG - chr5.1:67205557-67205576 MS.gene81635:CDS 40.0%
! GAAACTAGCTGAAGAGCTTT+TGG - chr5.1:67206187-67206206 MS.gene81635:intron 40.0%
! GAGAATCTTGGACTAGAGAA+AGG - chr5.1:67206221-67206240 MS.gene81635:intron 40.0%
!!! TTTTTTGCAGGCTACAACAC+GGG + chr5.1:67206694-67206713 None:intergenic 40.0%
AACAATAGAGTGGCGCATTG+GGG + chr5.1:67206444-67206463 None:intergenic 45.0%
AATTGCTCAAAGATGGCCAG+TGG - chr5.1:67206408-67206427 MS.gene81635:CDS 45.0%
ACAACAATAGAGTGGCGCAT+TGG + chr5.1:67206446-67206465 None:intergenic 45.0%
ACCTCTCCAATGTGTCCATA+AGG + chr5.1:67205784-67205803 None:intergenic 45.0%
ACCTTATGGACACATTGGAG+AGG - chr5.1:67205780-67205799 MS.gene81635:CDS 45.0%
AGATTACAGCATCACTGCCA+GGG + chr5.1:67207128-67207147 None:intergenic 45.0%
AGGAATCATCCTTCTCTTCC+AGG - chr5.1:67206364-67206383 MS.gene81635:intron 45.0%
AGGGTTGTAGAATGACGCTA+TGG + chr5.1:67207109-67207128 None:intergenic 45.0%
ATAGCGTCATTCTACAACCC+TGG - chr5.1:67207108-67207127 MS.gene81635:intron 45.0%
CAACAATAGAGTGGCGCATT+GGG + chr5.1:67206445-67206464 None:intergenic 45.0%
CCAATGTGTCCATAAGGTCA+TGG + chr5.1:67205778-67205797 None:intergenic 45.0%
CCATGACCTTATGGACACAT+TGG - chr5.1:67205775-67205794 MS.gene81635:CDS 45.0%
CCTTATCATCCTGGAAGAGA+AGG + chr5.1:67206376-67206395 None:intergenic 45.0%
CCTTCTCTTCCAGGATGATA+AGG - chr5.1:67206373-67206392 MS.gene81635:CDS 45.0%
CTTAGATGCTGTCCAAACTG+AGG - chr5.1:67205868-67205887 MS.gene81635:intron 45.0%
GAAGAGAAGGATGATTCCTC+CGG + chr5.1:67206363-67206382 None:intergenic 45.0%
GGCCATCTTTGAGCAATTGT+AGG + chr5.1:67206406-67206425 None:intergenic 45.0%
GGCCTACAATTGCTCAAAGA+TGG - chr5.1:67206401-67206420 MS.gene81635:CDS 45.0%
TAGATTACAGCATCACTGCC+AGG + chr5.1:67207129-67207148 None:intergenic 45.0%
TGGTATACCCCATGACCTTA+TGG - chr5.1:67205766-67205785 MS.gene81635:CDS 45.0%
TTCCAGGATGATAAGGTCAG+TGG - chr5.1:67206380-67206399 MS.gene81635:CDS 45.0%
TTTCCAACAATTCTGGCGCA+GGG + chr5.1:67207152-67207171 None:intergenic 45.0%
! GGATCAAGAGGACCAACTTT+TGG - chr5.1:67206266-67206285 MS.gene81635:intron 45.0%
! TTCGATCTGGCTCCTCTAAA+GGG - chr5.1:67206561-67206580 MS.gene81635:CDS 45.0%
! TTTTCCAACAATTCTGGCGC+AGG + chr5.1:67207153-67207172 None:intergenic 45.0%
! TTTTTGCAGGCTACAACACG+GGG + chr5.1:67206693-67206712 None:intergenic 45.0%
!! AGTGAGAGTTGACTTGGCAA+AGG + chr5.1:67206503-67206522 None:intergenic 45.0%
!! ATTTGGGCATTGAGGGTAGT+TGG + chr5.1:67206303-67206322 None:intergenic 45.0%
!! GGTTGACCAAAGAGCACTAT+AGG - chr5.1:67205801-67205820 MS.gene81635:CDS 45.0%
!! TGGTTTGTTGCTCCCTTTAG+AGG + chr5.1:67206576-67206595 None:intergenic 45.0%
!! TTACCTCAAGTTGGTCACCA+AGG + chr5.1:67206472-67206491 None:intergenic 45.0%
AAGGATGATTCCTCCGGCAT+CGG + chr5.1:67206357-67206376 None:intergenic 50.0%
ACAATAGAGTGGCGCATTGG+GGG + chr5.1:67206443-67206462 None:intergenic 50.0%
CCAAATCCAGAGCTGGTGAA+GGG - chr5.1:67206317-67206336 MS.gene81635:intron 50.0%
TCAATGCCCAAATCCAGAGC+TGG - chr5.1:67206310-67206329 MS.gene81635:intron 50.0%
TTGAGGGTAGTTGGCTACCT+TGG + chr5.1:67206294-67206313 None:intergenic 50.0%
TTGGGGGAACATCAATCCAC+TGG + chr5.1:67206427-67206446 None:intergenic 50.0%
! AGGACCAACTTTTGGCACCA+AGG - chr5.1:67206274-67206293 MS.gene81635:intron 50.0%
! CAACCTTGGTGACCAACTTG+AGG - chr5.1:67206466-67206485 MS.gene81635:CDS 50.0%
! CTTCGATCTGGCTCCTCTAA+AGG - chr5.1:67206560-67206579 MS.gene81635:CDS 50.0%
! CTTTAGAGGAGCCAGATCGA+AGG + chr5.1:67206562-67206581 None:intergenic 50.0%
!! AGCTCTGGATTTGGGCATTG+AGG + chr5.1:67206311-67206330 None:intergenic 50.0%
!! ATTCAGGGAGGTGTCGAACA+TGG + chr5.1:67205922-67205941 None:intergenic 50.0%
!! CCTTCACCAGCTCTGGATTT+GGG + chr5.1:67206319-67206338 None:intergenic 50.0%
!! GCTACCTTGGTGCCAAAAGT+TGG + chr5.1:67206281-67206300 None:intergenic 50.0%
!! GCTCTGGATTTGGGCATTGA+GGG + chr5.1:67206310-67206329 None:intergenic 50.0%
CCCAAATCCAGAGCTGGTGA+AGG - chr5.1:67206316-67206335 MS.gene81635:intron 55.0%
CTACCCTGCGCCAGAATTGT+TGG - chr5.1:67207146-67207165 MS.gene81635:intron 55.0%
GGCCACTGACCTTATCATCC+TGG + chr5.1:67206385-67206404 None:intergenic 55.0%
!! AGGGAGGTGTCGAACATGGA+AGG + chr5.1:67205918-67205937 None:intergenic 55.0%
!! CCCTTCACCAGCTCTGGATT+TGG + chr5.1:67206320-67206339 None:intergenic 55.0%
CGAAGACCCTTCACCAGCTC+TGG + chr5.1:67206326-67206345 None:intergenic 60.0%
CTTCGTGCTCACACCGATGC+CGG - chr5.1:67206341-67206360 MS.gene81635:intron 60.0%
TTGCAGGCTACAACACGGGG+AGG + chr5.1:67206690-67206709 None:intergenic 60.0%
CAGGCTACAACACGGGGAGG+AGG + chr5.1:67206687-67206706 None:intergenic 65.0%
CGTGCTCACACCGATGCCGG+AGG - chr5.1:67206344-67206363 MS.gene81635:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 67205536 67207323 67205536 ID=MS.gene81635
chr5.1 mRNA 67205536 67207323 67205536 ID=MS.gene81635.t1;Parent=MS.gene81635
chr5.1 exon 67207216 67207323 67207216 ID=MS.gene81635.t1.exon1;Parent=MS.gene81635.t1
chr5.1 CDS 67207216 67207323 67207216 ID=cds.MS.gene81635.t1;Parent=MS.gene81635.t1
chr5.1 exon 67206878 67207104 67206878 ID=MS.gene81635.t1.exon2;Parent=MS.gene81635.t1
chr5.1 CDS 67206878 67207104 67206878 ID=cds.MS.gene81635.t1;Parent=MS.gene81635.t1
chr5.1 exon 67206372 67206705 67206372 ID=MS.gene81635.t1.exon3;Parent=MS.gene81635.t1
chr5.1 CDS 67206372 67206705 67206372 ID=cds.MS.gene81635.t1;Parent=MS.gene81635.t1
chr5.1 exon 67205536 67205823 67205536 ID=MS.gene81635.t1.exon4;Parent=MS.gene81635.t1
chr5.1 CDS 67205536 67205823 67205536 ID=cds.MS.gene81635.t1;Parent=MS.gene81635.t1
Gene Sequence

>MS.gene81635

ATGATGATGAATTTCCCAATTATTAGCTTGGAGAGACTCAATGGTGTTGAGAGAAAAGACACCATGGAGAAAATTAAGGATGCTTGTGAGAATTGGGGATTCTTTGAGGTACAACTTTAATTTCTACAATACATTACCCTTAAATATATTTTTATAATTTGTTAGATAAAGTTACTTTCTTGGTATAACTTTTTTTCTTGTTTGTTTTCAAAACTCTAGCTGGTGAATCATGGTATACCCCATGACCTTATGGACACATTGGAGAGGTTGACCAAAGAGCACTATAGGAAATGCATGGAGCATAGGTTTAAGGAAGTAATATCAAGCAAAGGCTTAGATGCTGTCCAAACTGAGGTCAAAGATATGGATTGGGAAAGCACCTTCCATGTTCGACACCTCCCTGAATCAAACATTTCAGAGATACCTGATCTCAGTGATGAATACAGGTTACACAAAACAAACATTAATATGACATATATAACACATTGCATAACATAATTTTTTTGTCACGTTTCGAAATTTGAGCATATATTGCTCCATATATGATTTTGTAGAAGCATATATATCTTTTTTTTTTTTATCATGATTCTAAATTTCTTATGGTAATTGTGTGTACAGGAAAGTGATGAAGGATTTTTCTTTGAGGTTAGAGAAACTAGCTGAAGAGCTTTTGGATGTGTTATGTGAGAATCTTGGACTAGAGAAAGGTTACCTTAAAAAGGCATTTTATGGATCAAGAGGACCAACTTTTGGCACCAAGGTAGCCAACTACCCTCAATGCCCAAATCCAGAGCTGGTGAAGGGTCTTCGTGCTCACACCGATGCCGGAGGAATCATCCTTCTCTTCCAGGATGATAAGGTCAGTGGCCTACAATTGCTCAAAGATGGCCAGTGGATTGATGTTCCCCCAATGCGCCACTCTATTGTTGTCAACCTTGGTGACCAACTTGAGGTAAATTTGTTTCCTTTGCCAAGTCAACTCTCACTTCAATTCTCAAACGTAACGAAAAATTCCATATTAATCCTTCGATCTGGCTCCTCTAAAGGGAGCAACAAACCATAAATTGTTTAACAACCCTTGACTTTCTCACTTTACACTTTACTCACGTTAGAGGATCTAAATCTTGATTATATTGACGGATTTGAATCCTCCTCCCCGTGTTGTAGCCTGCAAAAAAAAAAATAATAACACATTTACGCCGTCAAAGATCAAATTTTCAAACTTGGTATTTTTATATTTAAAATAAAAATCATGTAATTCAAATCTAGACCGTCTGATCTCAATTCGTCAAAATACCTGGATGCGTAAAAAATTTGACTGCAAAGGAACCATACACAAGATTTGACATAAGTCATACTCCTAATGTGACCAAAAATATTAGACACTAATATGAAAAATCATCTAAGGATACGGTTACTATTTTTAGCATGTACTCTTCTATATCTTTCATGTGCAAAAAACAGGACACTTTATCTGACACTACTATTTTGTACAAACAGGTAATAACAAATGGCAAGTACAAGAGTGTGGAACACCGTGTGATAGCACAAACAAATGGAACAAGAATGTCCATAGCGTCATTCTACAACCCTGGCAGTGATGCTGTAATCTACCCTGCGCCAGAATTGTTGGAAAAACATGCAGAGGAAAAACACAATGTGTACCCAAAATTTGTGTTTGAAGAGTACATGAAGATCTATGCTGCTTTGAAATTCCATGCTAAGGAACCAAGATTTGAAGCCCTGAAAGAATCAAATGTTAATTTGGGTCCAATTGCAATTGTTTAA
Protein sequence

>MS.gene81635.t1

MMMNFPIISLERLNGVERKDTMEKIKDACENWGFFELVNHGIPHDLMDTLERLTKEHYRKCMEHRFKEVISSKGLDAVQTEVKDMDWESTFHVRHLPESNISEIPDLSDEYRKVMKDFSLRLEKLAEELLDVLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPQCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQTNGTRMSIASFYNPGSDAVIYPAPELLEKHAEEKHNVYPKFVFEEYMKIYAALKFHAKEPRFEALKESNVNLGPIAIV