AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050971


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050971.t1 MTR_8g023990 95.402 435 11 6 1 432 89 517 0.0 834
MS.gene050971.t1 MTR_7g117455 89.815 108 11 0 85 192 116 223 6.54e-65 215
MS.gene050971.t1 MTR_1g058350 70.796 113 29 2 82 192 71 181 1.10e-48 169
MS.gene050971.t1 MTR_5g053920 65.574 122 32 2 83 196 191 310 1.20e-47 167
MS.gene050971.t1 MTR_7g105370 73.333 105 25 2 91 195 65 166 2.05e-46 162
MS.gene050971.t1 MTR_1g093600 62.602 123 31 2 83 192 188 308 2.85e-43 156
MS.gene050971.t1 MTR_1g116920 50.435 115 44 3 60 174 145 246 1.88e-28 114
MS.gene050971.t1 MTR_4g028130 36.134 119 68 4 86 202 314 426 3.61e-15 78.2
MS.gene050971.t1 MTR_4g028130 36.134 119 68 4 86 202 314 426 4.14e-15 77.8
MS.gene050971.t1 MTR_4g028130 37.273 110 61 4 86 193 314 417 9.59e-15 77.0
MS.gene050971.t1 MTR_2g011940 38.182 110 60 4 86 193 343 446 1.94e-14 76.3
MS.gene050971.t1 MTR_2g011940 38.182 110 60 4 86 193 352 455 2.85e-14 75.5
MS.gene050971.t1 MTR_7g073240 35.338 133 76 5 63 192 98 223 3.14e-14 73.9
MS.gene050971.t1 MTR_2g011940 38.182 110 60 4 86 193 352 455 3.44e-14 75.1
MS.gene050971.t1 MTR_3g467380 38.462 91 51 3 86 174 338 425 9.49e-13 70.9
MS.gene050971.t1 MTR_4g088210 40.206 97 56 2 85 179 146 242 3.21e-12 68.9
MS.gene050971.t1 MTR_4g088210 40.206 97 56 2 85 179 146 242 3.54e-12 68.9
MS.gene050971.t1 MTR_2g014770 36.937 111 68 2 71 179 142 252 4.12e-12 68.6
MS.gene050971.t1 MTR_2g014770 36.937 111 68 2 71 179 142 252 5.12e-12 68.2
MS.gene050971.t1 MTR_2g094570 37.624 101 61 2 82 180 103 203 2.11e-11 66.2
MS.gene050971.t1 MTR_2g094570 37.624 101 61 2 82 180 103 203 2.15e-11 66.2
MS.gene050971.t1 MTR_2g094570 37.624 101 61 2 82 180 159 259 2.29e-11 66.2
MS.gene050971.t1 MTR_3g073420 31.579 133 80 3 59 190 95 217 6.64e-11 64.7
MS.gene050971.t1 MTR_4g058930 39.000 100 59 2 82 179 104 203 8.93e-11 64.3
MS.gene050971.t1 MTR_4g058930 39.000 100 59 2 82 179 104 203 9.48e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050971.t1 AT2G46870 46.006 313 96 10 67 370 7 255 9.65e-74 234
MS.gene050971.t1 AT1G01030 46.429 308 103 11 82 378 51 307 2.37e-68 221
MS.gene050971.t1 AT3G61970 45.246 305 83 12 67 366 1 226 1.55e-65 212
MS.gene050971.t1 AT1G01030 84.685 111 16 1 82 191 51 161 3.18e-62 204
MS.gene050971.t1 AT4G01500 36.467 351 147 9 79 409 28 322 1.06e-52 180
MS.gene050971.t1 AT3G11580 66.116 121 28 2 82 191 24 142 8.66e-50 169
MS.gene050971.t1 AT3G11580 66.116 121 28 2 82 191 24 142 8.66e-50 169
MS.gene050971.t1 AT3G11580 66.116 121 28 2 82 191 24 142 8.66e-50 169
MS.gene050971.t1 AT3G11580 66.116 121 28 2 82 191 24 142 2.54e-49 169
MS.gene050971.t1 AT1G68840 71.429 112 28 2 83 192 184 293 1.04e-48 170
MS.gene050971.t1 AT1G68840 71.429 112 28 2 83 192 184 293 1.04e-48 170
MS.gene050971.t1 AT3G11580 64.516 124 31 2 79 191 21 142 2.07e-48 169
MS.gene050971.t1 AT5G06250 67.227 119 27 2 83 191 42 158 3.27e-48 166
MS.gene050971.t1 AT5G06250 67.227 119 27 2 83 191 42 158 3.87e-48 166
MS.gene050971.t1 AT5G06250 67.227 119 27 2 83 191 42 158 5.10e-48 166
MS.gene050971.t1 AT5G06250 67.227 119 27 2 83 191 42 158 1.00e-47 164
MS.gene050971.t1 AT5G06250 67.227 119 27 2 83 191 42 158 1.39e-47 164
MS.gene050971.t1 AT1G13260 71.818 110 28 2 84 192 185 292 1.06e-46 164
MS.gene050971.t1 AT2G36080 68.696 115 31 2 80 191 31 143 2.02e-46 158
MS.gene050971.t1 AT2G36080 68.696 115 31 2 80 191 31 143 2.02e-46 158
MS.gene050971.t1 AT2G36080 68.696 115 31 2 80 191 31 143 3.14e-46 159
MS.gene050971.t1 AT2G36080 68.696 115 31 2 80 191 31 143 3.31e-46 160
MS.gene050971.t1 AT1G25560 63.025 119 34 2 83 193 191 307 1.20e-44 159
MS.gene050971.t1 AT3G25730 66.071 112 33 2 84 192 180 289 3.57e-43 154
MS.gene050971.t1 AT1G50680 43.220 118 56 2 66 172 136 253 3.13e-25 105
MS.gene050971.t1 AT1G51120 48.958 96 41 1 85 172 176 271 8.77e-24 102
MS.gene050971.t1 AT4G32010 37.273 110 61 4 86 193 285 388 7.00e-15 77.4
MS.gene050971.t1 AT4G32010 37.273 110 61 4 86 193 281 384 7.37e-15 77.4
MS.gene050971.t1 AT2G30470 39.560 91 50 3 86 174 294 381 3.81e-14 75.1
MS.gene050971.t1 AT1G35240 39.669 121 64 5 87 205 126 239 1.60e-12 69.7
MS.gene050971.t1 AT1G35520 38.843 121 65 5 87 205 126 239 6.89e-12 67.8
MS.gene050971.t1 AT2G33860 40.217 92 54 1 85 175 157 248 1.25e-11 67.0
MS.gene050971.t1 AT1G34310 38.017 121 66 5 87 205 126 239 2.02e-11 66.2
MS.gene050971.t1 AT1G35540 32.099 162 101 5 46 205 85 239 2.70e-11 65.9
MS.gene050971.t1 AT5G60450 30.921 152 93 3 33 181 106 248 5.82e-11 65.1
MS.gene050971.t1 AT2G28350 30.147 136 83 4 45 174 74 203 6.20e-11 65.1
MS.gene050971.t1 AT2G28350 30.147 136 83 4 45 174 74 203 6.28e-11 65.1
MS.gene050971.t1 AT5G60450 30.921 152 93 3 33 181 130 272 6.49e-11 65.1
MS.gene050971.t1 AT2G33860 39.560 91 54 1 86 175 1 91 7.35e-11 64.3
MS.gene050971.t1 AT1G34410 37.190 121 67 5 87 205 126 239 7.51e-11 64.7

Find 68 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGATTTAGATACTCTTAT+TGG 0.204888 8.1:+76404232 MS.gene050971:CDS
ATGTTTCCATTTCATCAATA+TGG 0.246411 8.1:+76404606 MS.gene050971:CDS
TTTAAAGCAAATAGATTTCA+TGG 0.253920 8.1:+76403942 MS.gene050971:CDS
AACAACAATATTCTATTAGA+TGG 0.265622 8.1:+76404469 MS.gene050971:CDS
GCAGCATCTAAAGGAGGATT+AGG 0.296328 8.1:+76403868 MS.gene050971:CDS
ATAGAATATTGTTGTTGATT+AGG 0.302183 8.1:-76404462 None:intergenic
AATTCATCTGATTGTGTAAA+GGG 0.302465 8.1:-76404572 None:intergenic
GGCATAGGTTGTTTATAGAT+TGG 0.332546 8.1:+76404367 MS.gene050971:CDS
CTACTAATGGTGCTGCAAAA+AGG 0.355470 8.1:+76404865 MS.gene050971:CDS
GCTGCTGAATTGTGAGATTC+TGG 0.358440 8.1:-76403850 None:intergenic
CCACCACCATATTGATGAAA+TGG 0.378629 8.1:-76404612 None:intergenic
TCTTGTTGTTCTTGTTGAAC+AGG 0.389155 8.1:-76404021 None:intergenic
TGCTGATGTTGTAACCTTTG+TGG 0.393602 8.1:-76404534 None:intergenic
CAACAAGAAGGAGGAGGAGG+AGG 0.405771 8.1:+76404747 MS.gene050971:CDS
CAAAGCTATGTTATGACAAA+AGG 0.424983 8.1:+76404264 MS.gene050971:CDS
GCGGCGTCGGCGAATTGTTT+AGG 0.427168 8.1:+76404346 MS.gene050971:CDS
CTTTAAATTTGTGAAATTTG+AGG 0.440342 8.1:-76403926 None:intergenic
TGTTGTAACCTTTGTGGTGT+TGG 0.444187 8.1:-76404528 None:intergenic
TTCAACAAGTGATGATAACT+TGG 0.444286 8.1:+76404929 MS.gene050971:CDS
GCTACTACTAGTACTACTAA+TGG 0.446131 8.1:+76404852 MS.gene050971:CDS
TGTTGGGAAACTAAACCGTT+TGG 0.462142 8.1:+76404110 MS.gene050971:CDS
TGATGATGATAATGAGAAAC+AGG 0.463873 8.1:-76404807 None:intergenic
TGTTGATTAGGAAGAAAGAA+AGG 0.468194 8.1:-76404450 None:intergenic
AAATTCATCTGATTGTGTAA+AGG 0.468921 8.1:-76404573 None:intergenic
TCATTTGATGTTGAATCAAG+TGG 0.470685 8.1:-76404165 None:intergenic
ACCATCACTTCAACATTTGA+AGG 0.471635 8.1:+76404971 MS.gene050971:CDS
ATAGGTTGTTTATAGATTGG+AGG 0.472973 8.1:+76404370 MS.gene050971:CDS
AACCTTTGTGGTGTTGGATA+AGG 0.473019 8.1:-76404522 None:intergenic
CTGTAACACCAAGTGATGTT+GGG 0.478186 8.1:+76404094 MS.gene050971:CDS
ACAACAATATTCTATTAGAT+GGG 0.482618 8.1:+76404470 MS.gene050971:CDS
GCTGTAACACCAAGTGATGT+TGG 0.482714 8.1:+76404093 MS.gene050971:CDS
CATTACTAGTTAAATTTCCA+TGG 0.483330 8.1:-76404830 None:intergenic
TTGCATCTTGATGCTGGTGA+TGG 0.484665 8.1:-76403900 None:intergenic
CAGCATCTAAAGGAGGATTA+GGG 0.488321 8.1:+76403869 MS.gene050971:CDS
CAGCAACAAGAAGGAGGAGG+AGG 0.488402 8.1:+76404744 MS.gene050971:CDS
AAGATAGAAATGGAAAATTG+TGG 0.489600 8.1:+76404211 MS.gene050971:CDS
AGGTTGTTGCATCTTGATGC+TGG 0.491253 8.1:-76403906 None:intergenic
TCGGCGAATTGTTTAGGCAT+AGG 0.495937 8.1:+76404352 MS.gene050971:CDS
CACAATTCAGCAGCATCTAA+AGG 0.501419 8.1:+76403859 MS.gene050971:CDS
CTTCCTTGAGGCATTGATGA+TGG 0.504465 8.1:-76404708 None:intergenic
CCATTTCATCAATATGGTGG+TGG 0.507266 8.1:+76404612 MS.gene050971:CDS
AACATCAACAAGATTTGAAG+AGG 0.528740 8.1:+76405025 MS.gene050971:CDS
AAGGTTGTTTGGTGTGAACA+TGG 0.542303 8.1:+76404890 MS.gene050971:CDS
GCTATGTTATGACAAAAGGT+TGG 0.544721 8.1:+76404268 MS.gene050971:CDS
TTTAGTTTCCCAACATCACT+TGG 0.546847 8.1:-76404102 None:intergenic
GATTCAACATCAAATGAGAA+AGG 0.548994 8.1:+76404171 MS.gene050971:CDS
AGTGATGGTACTATTGAAGA+AGG 0.553751 8.1:-76404957 None:intergenic
ACCTTCAAATGTTGAAGTGA+TGG 0.554721 8.1:-76404972 None:intergenic
GAAAGTGTTTCTTCATGATG+AGG 0.555132 8.1:-76404996 None:intergenic
TTTCCATTTCATCAATATGG+TGG 0.556128 8.1:+76404609 MS.gene050971:CDS
TTTGGTGTGAACATGGAGTG+TGG 0.563933 8.1:+76404897 MS.gene050971:CDS
TGTTGTTCTTGTTGAACAGG+AGG 0.569506 8.1:-76404018 None:intergenic
GTGAAAAGTGTTGCTGATGA+AGG 0.570944 8.1:-76404426 None:intergenic
GTTTCATTTCAACGCGGCGT+CGG 0.571504 8.1:+76404333 MS.gene050971:CDS
TGAGGCATTGATGATGGTGC+TGG 0.585946 8.1:-76404702 None:intergenic
AGTACAAGACAGCAACAAGA+AGG 0.600583 8.1:+76404735 MS.gene050971:CDS
CAATATTCTATTAGATGGGG+AGG 0.609587 8.1:+76404474 MS.gene050971:CDS
AGACAGCAACAAGAAGGAGG+AGG 0.619946 8.1:+76404741 MS.gene050971:CDS
GATTTCATGGAATTGTCACT+AGG 0.623329 8.1:+76403955 MS.gene050971:CDS
TTCCTTATCCAACACCACAA+AGG 0.633231 8.1:+76404520 MS.gene050971:CDS
ACAAGACAGCAACAAGAAGG+AGG 0.633565 8.1:+76404738 MS.gene050971:CDS
CAACAATATTCTATTAGATG+GGG 0.645043 8.1:+76404471 MS.gene050971:CDS
GCACCATCATCAATGCCTCA+AGG 0.646120 8.1:+76404705 MS.gene050971:CDS
TCTCATTATCATCATCACCA+TGG 0.646213 8.1:+76404813 MS.gene050971:CDS
CTTGTACTCAAGCTTCCTTG+AGG 0.650771 8.1:-76404720 None:intergenic
GGTGTGAACATGGAGTGTGG+TGG 0.666596 8.1:+76404900 MS.gene050971:CDS
AATTCAGCAGCATCTAAAGG+AGG 0.671535 8.1:+76403862 MS.gene050971:CDS
GACATTGTTTCATTTCAACG+CGG 0.724243 8.1:+76404327 MS.gene050971:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAACAATATTCTATTAGA+TGG + chr8.1:76404469-76404488 MS.gene050971:CDS 20.0%
!! ACAACAATATTCTATTAGAT+GGG + chr8.1:76404470-76404489 MS.gene050971:CDS 20.0%
!! CTTTAAATTTGTGAAATTTG+AGG - chr8.1:76403929-76403948 None:intergenic 20.0%
!!! ATAGAATATTGTTGTTGATT+AGG - chr8.1:76404465-76404484 None:intergenic 20.0%
!!! GTTTTTTCTCTTTAACAAAA+CGG - chr8.1:76404296-76404315 None:intergenic 20.0%
!!! TTTAAAGCAAATAGATTTCA+TGG + chr8.1:76403942-76403961 MS.gene050971:CDS 20.0%
! AAATTCATCTGATTGTGTAA+AGG - chr8.1:76404576-76404595 None:intergenic 25.0%
! AAGATAGAAATGGAAAATTG+TGG + chr8.1:76404211-76404230 MS.gene050971:CDS 25.0%
! AATTCATCTGATTGTGTAAA+GGG - chr8.1:76404575-76404594 None:intergenic 25.0%
! ATGTTTCCATTTCATCAATA+TGG + chr8.1:76404606-76404625 MS.gene050971:CDS 25.0%
! CAACAATATTCTATTAGATG+GGG + chr8.1:76404471-76404490 MS.gene050971:CDS 25.0%
! CATTACTAGTTAAATTTCCA+TGG - chr8.1:76404833-76404852 None:intergenic 25.0%
! CTCATATAAAAAACTGAACT+TGG - chr8.1:76404675-76404694 None:intergenic 25.0%
!!! CTGAATTTTGAAGATAGAAA+TGG + chr8.1:76404201-76404220 MS.gene050971:CDS 25.0%
AAAGAGAAAAAACTTGATGC+TGG + chr8.1:76404303-76404322 MS.gene050971:CDS 30.0%
AACATCAACAAGATTTGAAG+AGG + chr8.1:76405025-76405044 MS.gene050971:CDS 30.0%
ATAGGTTGTTTATAGATTGG+AGG + chr8.1:76404370-76404389 MS.gene050971:CDS 30.0%
CAAAGCTATGTTATGACAAA+AGG + chr8.1:76404264-76404283 MS.gene050971:CDS 30.0%
GATTCAACATCAAATGAGAA+AGG + chr8.1:76404171-76404190 MS.gene050971:CDS 30.0%
GGAGATTTAGATACTCTTAT+TGG + chr8.1:76404232-76404251 MS.gene050971:CDS 30.0%
TCATTTGATGTTGAATCAAG+TGG - chr8.1:76404168-76404187 None:intergenic 30.0%
TTCAACAAGTGATGATAACT+TGG + chr8.1:76404929-76404948 MS.gene050971:CDS 30.0%
TTTCCATTTCATCAATATGG+TGG + chr8.1:76404609-76404628 MS.gene050971:CDS 30.0%
! CTTTTGTCATAACATAGCTT+TGG - chr8.1:76404266-76404285 None:intergenic 30.0%
! GAAGAAGCTTCAATGATTTT+TGG + chr8.1:76405059-76405078 MS.gene050971:CDS 30.0%
! TGATGATGATAATGAGAAAC+AGG - chr8.1:76404810-76404829 None:intergenic 30.0%
! TGTTGATTAGGAAGAAAGAA+AGG - chr8.1:76404453-76404472 None:intergenic 30.0%
!! TACTTTTCAGCATGTTGTTT+TGG - chr8.1:76404141-76404160 None:intergenic 30.0%
!! TGTTCTTTTTCATGTGTACT+AGG - chr8.1:76404060-76404079 None:intergenic 30.0%
!!! GTTGTTTTGGTATAACCAAA+CGG - chr8.1:76404128-76404147 None:intergenic 30.0%
ACCATCACTTCAACATTTGA+AGG + chr8.1:76404971-76404990 MS.gene050971:CDS 35.0%
ACCTTCAAATGTTGAAGTGA+TGG - chr8.1:76404975-76404994 None:intergenic 35.0%
AGTGATGGTACTATTGAAGA+AGG - chr8.1:76404960-76404979 None:intergenic 35.0%
CAATATTCTATTAGATGGGG+AGG + chr8.1:76404474-76404493 MS.gene050971:CDS 35.0%
GACATTGTTTCATTTCAACG+CGG + chr8.1:76404327-76404346 MS.gene050971:CDS 35.0%
GATTTCATGGAATTGTCACT+AGG + chr8.1:76403955-76403974 MS.gene050971:CDS 35.0%
GCAAAAAGGTTAAGGTTGTT+TGG + chr8.1:76404879-76404898 MS.gene050971:CDS 35.0%
GCTACTACTAGTACTACTAA+TGG + chr8.1:76404852-76404871 MS.gene050971:CDS 35.0%
GCTATGTTATGACAAAAGGT+TGG + chr8.1:76404268-76404287 MS.gene050971:CDS 35.0%
GGCATAGGTTGTTTATAGAT+TGG + chr8.1:76404367-76404386 MS.gene050971:CDS 35.0%
TCTCATTATCATCATCACCA+TGG + chr8.1:76404813-76404832 MS.gene050971:CDS 35.0%
! TTTAGTTTCCCAACATCACT+TGG - chr8.1:76404105-76404124 None:intergenic 35.0%
!! GAAAGTGTTTCTTCATGATG+AGG - chr8.1:76404999-76405018 None:intergenic 35.0%
!! TCTTGTTGTTCTTGTTGAAC+AGG - chr8.1:76404024-76404043 None:intergenic 35.0%
AATTCAGCAGCATCTAAAGG+AGG + chr8.1:76403862-76403881 MS.gene050971:CDS 40.0%
AGTACAAGACAGCAACAAGA+AGG + chr8.1:76404735-76404754 MS.gene050971:CDS 40.0%
CACAATTCAGCAGCATCTAA+AGG + chr8.1:76403859-76403878 MS.gene050971:CDS 40.0%
CAGCATCTAAAGGAGGATTA+GGG + chr8.1:76403869-76403888 MS.gene050971:CDS 40.0%
CCACCACCATATTGATGAAA+TGG - chr8.1:76404615-76404634 None:intergenic 40.0%
CCATTTCATCAATATGGTGG+TGG + chr8.1:76404612-76404631 MS.gene050971:CDS 40.0%
CTGTAACACCAAGTGATGTT+GGG + chr8.1:76404094-76404113 MS.gene050971:CDS 40.0%
TGCTGATGTTGTAACCTTTG+TGG - chr8.1:76404537-76404556 None:intergenic 40.0%
TGTTGGGAAACTAAACCGTT+TGG + chr8.1:76404110-76404129 MS.gene050971:CDS 40.0%
TGTTGTAACCTTTGTGGTGT+TGG - chr8.1:76404531-76404550 None:intergenic 40.0%
TGTTGTTCTTGTTGAACAGG+AGG - chr8.1:76404021-76404040 None:intergenic 40.0%
TTCCTTATCCAACACCACAA+AGG + chr8.1:76404520-76404539 MS.gene050971:CDS 40.0%
! AACCTTTGTGGTGTTGGATA+AGG - chr8.1:76404525-76404544 None:intergenic 40.0%
!! AAGGTTGTTTGGTGTGAACA+TGG + chr8.1:76404890-76404909 MS.gene050971:CDS 40.0%
!! ATGGTGCTGCAAAAAGGTTA+AGG + chr8.1:76404871-76404890 MS.gene050971:CDS 40.0%
!! CTACTAATGGTGCTGCAAAA+AGG + chr8.1:76404865-76404884 MS.gene050971:CDS 40.0%
!! GTGAAAAGTGTTGCTGATGA+AGG - chr8.1:76404429-76404448 None:intergenic 40.0%
ACAAGACAGCAACAAGAAGG+AGG + chr8.1:76404738-76404757 MS.gene050971:CDS 45.0%
AGGTTGTTGCATCTTGATGC+TGG - chr8.1:76403909-76403928 None:intergenic 45.0%
CTTGTACTCAAGCTTCCTTG+AGG - chr8.1:76404723-76404742 None:intergenic 45.0%
GCAGCATCTAAAGGAGGATT+AGG + chr8.1:76403868-76403887 MS.gene050971:CDS 45.0%
GCTGCTGAATTGTGAGATTC+TGG - chr8.1:76403853-76403872 None:intergenic 45.0%
GCTGTAACACCAAGTGATGT+TGG + chr8.1:76404093-76404112 MS.gene050971:CDS 45.0%
TCGGCGAATTGTTTAGGCAT+AGG + chr8.1:76404352-76404371 MS.gene050971:CDS 45.0%
TTGCATCTTGATGCTGGTGA+TGG - chr8.1:76403903-76403922 None:intergenic 45.0%
! TTTGGTGTGAACATGGAGTG+TGG + chr8.1:76404897-76404916 MS.gene050971:CDS 45.0%
!! CTTCCTTGAGGCATTGATGA+TGG - chr8.1:76404711-76404730 None:intergenic 45.0%
AGACAGCAACAAGAAGGAGG+AGG + chr8.1:76404741-76404760 MS.gene050971:CDS 50.0%
GCACCATCATCAATGCCTCA+AGG + chr8.1:76404705-76404724 MS.gene050971:CDS 50.0%
GTTTCATTTCAACGCGGCGT+CGG + chr8.1:76404333-76404352 MS.gene050971:CDS 50.0%
!! TGAGGCATTGATGATGGTGC+TGG - chr8.1:76404705-76404724 None:intergenic 50.0%
CAACAAGAAGGAGGAGGAGG+AGG + chr8.1:76404747-76404766 MS.gene050971:CDS 55.0%
CAGCAACAAGAAGGAGGAGG+AGG + chr8.1:76404744-76404763 MS.gene050971:CDS 55.0%
GGTGTGAACATGGAGTGTGG+TGG + chr8.1:76404900-76404919 MS.gene050971:CDS 55.0%
CAAGAAGGAGGAGGAGGAGG+AGG + chr8.1:76404750-76404769 MS.gene050971:CDS 60.0%
!! GCGGCGTCGGCGAATTGTTT+AGG + chr8.1:76404346-76404365 MS.gene050971:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 76403826 76405124 76403826 ID=MS.gene050971
chr8.1 mRNA 76403826 76405124 76403826 ID=MS.gene050971.t1;Parent=MS.gene050971
chr8.1 exon 76403826 76405124 76403826 ID=MS.gene050971.t1.exon1;Parent=MS.gene050971.t1
chr8.1 CDS 76403826 76405124 76403826 ID=cds.MS.gene050971.t1;Parent=MS.gene050971.t1
Gene Sequence

>MS.gene050971

ATGAATCATCATCATCATCATTCACCAGAATCTCACAATTCAGCAGCATCTAAAGGAGGATTAGGGTTATTACACCATCACCAGCATCAAGATGCAACAACCTCAAATTTCACAAATTTAAAGCAAATAGATTTCATGGAATTGTCACTAGGTAACAACAATAACAAAAACAAAGATGTTGTTATTAATGTTCCTCCTGTTCAACAAGAACAACAAGAACAAGAACAACAACCTAGTACACATGAAAAAGAACACATGTTTGACAAAGCTGTAACACCAAGTGATGTTGGGAAACTAAACCGTTTGGTTATACCAAAACAACATGCTGAAAAGTATTTTCCACTTGATTCAACATCAAATGAGAAAGGTCTTCTTCTGAATTTTGAAGATAGAAATGGAAAATTGTGGAGATTTAGATACTCTTATTGGAACAGTAGCCAAAGCTATGTTATGACAAAAGGTTGGAGCCGTTTTGTTAAAGAGAAAAAACTTGATGCTGGTGACATTGTTTCATTTCAACGCGGCGTCGGCGAATTGTTTAGGCATAGGTTGTTTATAGATTGGAGGAGAAGATCTAATCATAATCATCATAATATTGATCCTTCATCAGCAACACTTTTCACTCCTTTCTTTCTTCCTAATCAACAACAATATTCTATTAGATGGGGAGGTGCTAATAGTAGATTTTACTCTCTTCCTTATCCAACACCACAAAGGTTACAACATCAGCAACAAAATCATCATGACCCTTTACACAATCAGATGAATTTTAATCATAACATGTTTCCATTTCATCAATATGGTGGTGGAAATGTGAATCATCAATACAATTTTCATCATCATGATCCAAGTTCAGTTTTTTATATGAGATCATTACCAGCACCATCATCAATGCCTCAAGGAAGCTTGAGTACAAGACAGCAACAAGAAGGAGGAGGAGGAGGAGGAAGCAATGTCTCAAACATGATTATTGATTCTGTTCCTGTTTCTCATTATCATCATCACCATGGAAATTTAACTAGTAATGCTACTACTAGTACTACTAATGGTGCTGCAAAAAGGTTAAGGTTGTTTGGTGTGAACATGGAGTGTGGTGGTTCTTCTTCAACAAGTGATGATAACTTGGCTTCTCCTTCTTCAATAGTACCATCACTTCAACATTTGAAGGTACCTCATCATGAAGAAACACTTTCAAGTTCAACATCAACAAGATTTGAAGAGGATAAGAGAAGAGAAGAAGCTTCAATGATTTTTGGTTTAGATACTTCTTTGCAATATCATAATTACCAACAACAATGA

Protein sequence

>MS.gene050971.t1

MNHHHHHSPESHNSAASKGGLGLLHHHQHQDATTSNFTNLKQIDFMELSLGNNNNKNKDVVINVPPVQQEQQEQEQQPSTHEKEHMFDKAVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGELFRHRLFIDWRRRSNHNHHNIDPSSATLFTPFFLPNQQQYSIRWGGANSRFYSLPYPTPQRLQHQQQNHHDPLHNQMNFNHNMFPFHQYGGGNVNHQYNFHHHDPSSVFYMRSLPAPSSMPQGSLSTRQQQEGGGGGGSNVSNMIIDSVPVSHYHHHHGNLTSNATTSTTNGAAKRLRLFGVNMECGGSSSTSDDNLASPSSIVPSLQHLKVPHHEETLSSSTSTRFEEDKRREEASMIFGLDTSLQYHNYQQQ