Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81705.t1 | XP_003616764.1 | 96.2 | 364 | 14 | 0 | 1 | 364 | 1 | 364 | 2.00E-196 | 694.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81705.t1 | P49572 | 70.2 | 326 | 95 | 2 | 41 | 364 | 49 | 374 | 4.0e-129 | 462.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81705.t1 | G7KH34 | 96.2 | 364 | 14 | 0 | 1 | 364 | 1 | 364 | 1.4e-196 | 694.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061224 | MS.gene81705 | 0.821584 | 3.74E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81705.t1 | MTR_5g084030 | 96.154 | 364 | 14 | 0 | 1 | 364 | 1 | 364 | 0.0 | 715 |
| MS.gene81705.t1 | MTR_5g084030 | 96.348 | 356 | 13 | 0 | 9 | 364 | 10 | 365 | 0.0 | 704 |
| MS.gene81705.t1 | MTR_5g084030 | 97.161 | 317 | 9 | 0 | 48 | 364 | 11 | 327 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81705.t1 | AT5G48220 | 72.676 | 355 | 88 | 4 | 10 | 364 | 7 | 352 | 0.0 | 525 |
| MS.gene81705.t1 | AT5G48220 | 79.167 | 312 | 64 | 1 | 53 | 364 | 27 | 337 | 0.0 | 522 |
| MS.gene81705.t1 | AT5G48220 | 81.661 | 289 | 53 | 0 | 76 | 364 | 1 | 289 | 0.0 | 507 |
| MS.gene81705.t1 | AT5G48220 | 81.661 | 289 | 53 | 0 | 76 | 364 | 1 | 289 | 0.0 | 507 |
| MS.gene81705.t1 | AT2G04400 | 70.245 | 326 | 95 | 2 | 41 | 364 | 49 | 374 | 8.93e-169 | 477 |
Find 88 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGGAAGCTTTGAAAATT+TGG | 0.126121 | 5.1:-66183818 | MS.gene81705:intron |
| GTTTAGATGGTTGGGGAATC+TGG | 0.247392 | 5.1:-66182745 | MS.gene81705:intron |
| TTCTCCTTATTCTTATACCT+TGG | 0.277135 | 5.1:+66186260 | None:intergenic |
| GTAAAACAGCAGCAATTAAA+AGG | 0.309423 | 5.1:+66183590 | None:intergenic |
| AGGGAATTCGATCGTGTTCT+TGG | 0.315417 | 5.1:-66183074 | MS.gene81705:CDS |
| AGTTGGAGGAATAGTGGTTC+TGG | 0.317340 | 5.1:+66187030 | None:intergenic |
| CTACCCAAGGTATAAGAATA+AGG | 0.335290 | 5.1:-66186264 | MS.gene81705:CDS |
| TGAAAATGCACCTCCTGTTC+GGG | 0.336397 | 5.1:-66185986 | MS.gene81705:CDS |
| ATGGTTATGTTTAGATGGTT+GGG | 0.336646 | 5.1:-66182753 | MS.gene81705:intron |
| AAAGGTCCTACATAATGATT+AGG | 0.338327 | 5.1:+66186220 | None:intergenic |
| TTGAAAATGCACCTCCTGTT+CGG | 0.344054 | 5.1:-66185987 | MS.gene81705:CDS |
| AGAAAGAAAACCCCTTCTTA+TGG | 0.363149 | 5.1:-66186022 | MS.gene81705:CDS |
| AGGAATAGTGGTTCTGGGAT+TGG | 0.374224 | 5.1:+66187036 | None:intergenic |
| TGTACATAAGCAATGTCTTC+AGG | 0.374331 | 5.1:+66182712 | None:intergenic |
| TCTCCTTATTCTTATACCTT+GGG | 0.386336 | 5.1:+66186261 | None:intergenic |
| TATTTCCCTCGTTCTGCAAC+CGG | 0.387527 | 5.1:+66186191 | None:intergenic |
| TATGGTTATGTTTAGATGGT+TGG | 0.396274 | 5.1:-66182754 | MS.gene81705:intron |
| GTTGGAGGAATAGTGGTTCT+GGG | 0.405718 | 5.1:+66187031 | None:intergenic |
| AAGGTCCTACATAATGATTA+GGG | 0.406698 | 5.1:+66186221 | None:intergenic |
| GGCATCAACAATCGTAATCT+TGG | 0.408935 | 5.1:-66183029 | MS.gene81705:intron |
| TAATGAACGAACTGGATTGC+CGG | 0.416704 | 5.1:-66185938 | MS.gene81705:CDS |
| TTGGAGTTAATAAGAAATGC+TGG | 0.428736 | 5.1:-66183799 | MS.gene81705:CDS |
| GACTTGAGTTGGAGGAATAG+TGG | 0.436368 | 5.1:+66187024 | None:intergenic |
| CGATCGTGTTCTTGGAATAG+AGG | 0.438551 | 5.1:-66183066 | MS.gene81705:CDS |
| GTTACCCTTGAGAGAAATCA+AGG | 0.441183 | 5.1:+66187084 | None:intergenic |
| GAAAACCCCTTCTTATGGTT+AGG | 0.442937 | 5.1:-66186017 | MS.gene81705:CDS |
| ACCACGAAGAAGCTTCTTGA+AGG | 0.446760 | 5.1:-66182890 | MS.gene81705:CDS |
| TCCTTCAAGAAGCTTCTTCG+TGG | 0.451429 | 5.1:+66182889 | None:intergenic |
| ATTGTAGCCGAACCTTCATT+AGG | 0.459178 | 5.1:+66186367 | None:intergenic |
| AATAAGAAATGCTGGAGTAA+AGG | 0.463960 | 5.1:-66183791 | MS.gene81705:intron |
| GTTAAGATATGCAAATTACT+TGG | 0.466429 | 5.1:-66183544 | MS.gene81705:CDS |
| GATATGCAAATTACTTGGAC+TGG | 0.466507 | 5.1:-66183539 | MS.gene81705:CDS |
| CTATAAGTATTGACTTGAGT+TGG | 0.466810 | 5.1:+66187013 | None:intergenic |
| GGTTGAAGCACTCAAAGTTA+AGG | 0.468677 | 5.1:-66186323 | MS.gene81705:CDS |
| TCTCTCAAGATGCCTCTACT+TGG | 0.471626 | 5.1:+66185886 | None:intergenic |
| AGTAGGAATGTTTCATAATG+AGG | 0.474718 | 5.1:-66186293 | MS.gene81705:CDS |
| GGCAGAGCCTAATGAAGGTT+CGG | 0.479822 | 5.1:-66186374 | MS.gene81705:CDS |
| AGGGCGGCTAATGAACGAAC+TGG | 0.483524 | 5.1:-66185946 | MS.gene81705:CDS |
| TTCTGCAACCGGAATTGAAA+AGG | 0.484408 | 5.1:+66186202 | None:intergenic |
| GCCCCAATAAAATCCCGAAC+AGG | 0.484947 | 5.1:+66185973 | None:intergenic |
| TGAATTCTTTGCACAACAAA+GGG | 0.485742 | 5.1:+66183665 | None:intergenic |
| GGAATCCTTGATTTCTCTCA+AGG | 0.486941 | 5.1:-66187089 | MS.gene81705:CDS |
| ATAGAGGGCGTTGAGCTCAT+TGG | 0.489453 | 5.1:-66183050 | MS.gene81705:CDS |
| AAATACACCACGTAACATCT+TGG | 0.493800 | 5.1:-66186173 | MS.gene81705:CDS |
| AATGAACGAACTGGATTGCC+GGG | 0.495625 | 5.1:-66185937 | MS.gene81705:CDS |
| AAGCACTCAAAGTTAAGGAA+TGG | 0.501917 | 5.1:-66186318 | MS.gene81705:CDS |
| TGGTTATGTTTAGATGGTTG+GGG | 0.503041 | 5.1:-66182752 | MS.gene81705:intron |
| GATTAGGCAGAGCCTAATGA+AGG | 0.506962 | 5.1:-66186379 | MS.gene81705:intron |
| ATTGCTCAATCTTATGAGAA+AGG | 0.508235 | 5.1:-66184020 | MS.gene81705:CDS |
| ATAAGGAGAAGACCACCAAC+TGG | 0.508374 | 5.1:-66186247 | MS.gene81705:CDS |
| ATGAATTCTTTGCACAACAA+AGG | 0.510154 | 5.1:+66183664 | None:intergenic |
| AGCACTCAAAGTTAAGGAAT+GGG | 0.512586 | 5.1:-66186317 | MS.gene81705:CDS |
| TCGGCTACAATAGCCACATC+TGG | 0.513917 | 5.1:-66186355 | MS.gene81705:CDS |
| TAAGTATTGACTTGAGTTGG+AGG | 0.516113 | 5.1:+66187016 | None:intergenic |
| CTCTACTATGCTCGATCGAA+AGG | 0.521577 | 5.1:-66183625 | MS.gene81705:CDS |
| AAAGTTAAGGAATGGGAAGT+AGG | 0.522034 | 5.1:-66186310 | MS.gene81705:CDS |
| AATGTAGGTGCATGATGAGA+GGG | 0.523705 | 5.1:-66183093 | MS.gene81705:intron |
| ACCCCTTCTTATGGTTAGGA+AGG | 0.525971 | 5.1:-66186013 | MS.gene81705:CDS |
| ATGTATTTGATGTCAAGATC+AGG | 0.527017 | 5.1:+66183568 | None:intergenic |
| TTGACTTCAGCAATCAATCC+CGG | 0.531405 | 5.1:+66185919 | None:intergenic |
| GGGCCTTCCTAACCATAAGA+AGG | 0.532318 | 5.1:+66186010 | None:intergenic |
| AAGAATTCATCATAGATGCT+TGG | 0.536166 | 5.1:-66183651 | MS.gene81705:CDS |
| ATTGCTTATGTACAAGAAGC+AGG | 0.536943 | 5.1:-66182703 | MS.gene81705:CDS |
| GGCCTTCCTAACCATAAGAA+GGG | 0.541500 | 5.1:+66186011 | None:intergenic |
| TAATGTAGGTGCATGATGAG+AGG | 0.574784 | 5.1:-66183094 | MS.gene81705:intron |
| TCAATTCCGGTTGCAGAACG+AGG | 0.575802 | 5.1:-66186197 | MS.gene81705:CDS |
| GATCGTGTTCTTGGAATAGA+GGG | 0.577340 | 5.1:-66183065 | MS.gene81705:CDS |
| CCAATAAAATCCCGAACAGG+AGG | 0.579688 | 5.1:+66185976 | None:intergenic |
| ATTGATTGCTGAAGTCAAGA+AGG | 0.582300 | 5.1:-66185914 | MS.gene81705:CDS |
| AATGAGGTTGCTGCTACCCA+AGG | 0.588159 | 5.1:-66186277 | MS.gene81705:CDS |
| CAATTCCGGTTGCAGAACGA+GGG | 0.593820 | 5.1:-66186196 | MS.gene81705:CDS |
| TGATCTTGACATCAAATACA+TGG | 0.599333 | 5.1:-66183566 | MS.gene81705:CDS |
| TGGACTGGCAGCTCTTGTTG+AGG | 0.600595 | 5.1:-66183524 | MS.gene81705:intron |
| GGAAGAGATTGTGTGGAACA+AGG | 0.601540 | 5.1:-66186152 | MS.gene81705:CDS |
| CAAGGACAAAGAAGTCGCGC+AGG | 0.602152 | 5.1:-66186134 | MS.gene81705:intron |
| TGGGATTGGAAGAGAACGAA+GGG | 0.606231 | 5.1:+66187050 | None:intergenic |
| AACCACAGATTCACCAGATG+TGG | 0.614744 | 5.1:+66186342 | None:intergenic |
| GCTCAATCTTATGAGAAAGG+TGG | 0.618974 | 5.1:-66184017 | MS.gene81705:CDS |
| GCCTTCCTAACCATAAGAAG+GGG | 0.620205 | 5.1:+66186012 | None:intergenic |
| GAATCCTTGATTTCTCTCAA+GGG | 0.623977 | 5.1:-66187088 | MS.gene81705:CDS |
| AAGAAGGCTTCACCAAGTAG+AGG | 0.628444 | 5.1:-66185898 | MS.gene81705:CDS |
| AAGCTTCTTGAAGGAGAGCG+AGG | 0.630844 | 5.1:-66182881 | MS.gene81705:CDS |
| GGTCCTACATAATGATTAGG+GGG | 0.633768 | 5.1:+66186223 | None:intergenic |
| ACATCTTGGAAGAGATTGTG+TGG | 0.641943 | 5.1:-66186159 | MS.gene81705:CDS |
| AGCCACATCTGGTGAATCTG+TGG | 0.650573 | 5.1:-66186344 | MS.gene81705:CDS |
| AGGTCCTACATAATGATTAG+GGG | 0.661433 | 5.1:+66186222 | None:intergenic |
| CTGGGATTGGAAGAGAACGA+AGG | 0.670959 | 5.1:+66187049 | None:intergenic |
| ATCTCTTCCAAGATGTTACG+TGG | 0.686071 | 5.1:+66186166 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACATTATAAAAAAATCAAA+AGG | + | chr5.1:66183021-66183040 | None:intergenic | 10.0% |
| !! | ACATTATAAAAAAATCAAAA+GGG | + | chr5.1:66183020-66183039 | None:intergenic | 10.0% |
| !! | TACTTGTAAATATAATAAAT+AGG | + | chr5.1:66186438-66186457 | None:intergenic | 10.0% |
| !! | AAACATTATATGAAACAAAA+AGG | + | chr5.1:66183200-66183219 | None:intergenic | 15.0% |
| !! | AAATATGATCAAAATCAAAA+AGG | + | chr5.1:66183365-66183384 | None:intergenic | 15.0% |
| !! | AACAATAAAACAATACAAAA+AGG | + | chr5.1:66182860-66182879 | None:intergenic | 15.0% |
| !! | AACATTATATGAAACAAAAA+GGG | + | chr5.1:66183199-66183218 | None:intergenic | 15.0% |
| !! | AATATGATCAAAATCAAAAA+GGG | + | chr5.1:66183364-66183383 | None:intergenic | 15.0% |
| !! | CAAAAGAAATATATAAATCA+AGG | + | chr5.1:66186656-66186675 | None:intergenic | 15.0% |
| !! | TGTTGTAATATTTATACTTA+CGG | - | chr5.1:66186804-66186823 | MS.gene81705:intron | 15.0% |
| !!! | AAGTTAATTTTGTATAGTTA+CGG | + | chr5.1:66186495-66186514 | None:intergenic | 15.0% |
| !!! | ATAATGTTTTTGTGATTATT+TGG | - | chr5.1:66183033-66183052 | MS.gene81705:CDS | 15.0% |
| !!! | ATTTTTTGTATTTAATTGAG+AGG | - | chr5.1:66183336-66183355 | MS.gene81705:intron | 15.0% |
| !!! | ATTTTTTTGGTTTAATTTTG+AGG | - | chr5.1:66183171-66183190 | MS.gene81705:intron | 15.0% |
| !!! | CTTGATTTATATATTTCTTT+TGG | - | chr5.1:66186654-66186673 | MS.gene81705:intron | 15.0% |
| !!! | TTGATTTTGATCATATTTTT+GGG | - | chr5.1:66183367-66183386 | MS.gene81705:intron | 15.0% |
| !!! | TTGTTTCATATAATGTTTTT+TGG | - | chr5.1:66183202-66183221 | MS.gene81705:intron | 15.0% |
| !!! | TTTGATTTTGATCATATTTT+TGG | - | chr5.1:66183366-66183385 | MS.gene81705:intron | 15.0% |
| !! | AAGTTCATATTTACATTAAC+TGG | + | chr5.1:66184498-66184517 | None:intergenic | 20.0% |
| !! | ACTTTAAACTGATGATTATA+TGG | - | chr5.1:66187012-66187031 | MS.gene81705:CDS | 20.0% |
| !! | AGTTCATATTTACATTAACT+GGG | + | chr5.1:66184497-66184516 | None:intergenic | 20.0% |
| !! | ATTATATGGTTATGTTTAGA+TGG | - | chr5.1:66187026-66187045 | MS.gene81705:CDS | 20.0% |
| !! | ATTTAGCAAAGACAAATAAA+AGG | + | chr5.1:66184292-66184311 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAAAAACAGAAC+AGG | + | chr5.1:66184715-66184734 | None:intergenic | 20.0% |
| !! | TTATCATTCATTTCATAAAG+AGG | - | chr5.1:66185401-66185420 | MS.gene81705:intron | 20.0% |
| !!! | ATGTAAATATGAACTTTTGA+AGG | - | chr5.1:66184502-66184521 | MS.gene81705:intron | 20.0% |
| !!! | ATTATTTGCTGTTTTGATTA+AGG | - | chr5.1:66183225-66183244 | MS.gene81705:intron | 20.0% |
| !!! | ATTATTTGGTGTTATGATTA+TGG | - | chr5.1:66183047-66183066 | MS.gene81705:CDS | 20.0% |
| !!! | GATTATTTGATGTTTTGATT+AGG | - | chr5.1:66183389-66183408 | MS.gene81705:intron | 20.0% |
| !!! | GTTGATGCATATTATTTTTT+TGG | - | chr5.1:66183158-66183177 | MS.gene81705:intron | 20.0% |
| !!! | GTTTGTTTTGTGAAATTTTA+AGG | + | chr5.1:66184891-66184910 | None:intergenic | 20.0% |
| !!! | TGTTATTAAGTCGATTATTT+TGG | - | chr5.1:66184745-66184764 | MS.gene81705:intron | 20.0% |
| !!! | TTTTATCATTCATTTCATAG+TGG | - | chr5.1:66185479-66185498 | MS.gene81705:intron | 20.0% |
| !!! | TTTTCGTTGTATATTTATCT+GGG | - | chr5.1:66182879-66182898 | MS.gene81705:CDS | 20.0% |
| !!! | TTTTTCGTTGTATATTTATC+TGG | - | chr5.1:66182878-66182897 | MS.gene81705:CDS | 20.0% |
| ! | AAAACTAAATACACTAGATG+TGG | + | chr5.1:66183281-66183300 | None:intergenic | 25.0% |
| ! | AAATCAGTCATAAAAGTTCA+AGG | + | chr5.1:66186527-66186546 | None:intergenic | 25.0% |
| ! | AAGTTATTACTGATATCATG+TGG | - | chr5.1:66184000-66184019 | MS.gene81705:CDS | 25.0% |
| ! | AGTGTAATTTAAACTGTGAT+CGG | - | chr5.1:66186397-66186416 | MS.gene81705:intron | 25.0% |
| ! | AGTTATTACTGATATCATGT+GGG | - | chr5.1:66184001-66184020 | MS.gene81705:CDS | 25.0% |
| ! | CAAATGAACTTCCAAAAAAT+AGG | + | chr5.1:66184633-66184652 | None:intergenic | 25.0% |
| ! | CACTGCTAAATGTTAATATT+TGG | - | chr5.1:66185877-66185896 | MS.gene81705:CDS | 25.0% |
| ! | GAAGAAATAAAAACTGACAA+CGG | + | chr5.1:66184829-66184848 | None:intergenic | 25.0% |
| ! | GAAGAAGAAATCTTAAATAG+TGG | + | chr5.1:66185116-66185135 | None:intergenic | 25.0% |
| ! | GTAGAATAAATCGTATATCA+AGG | + | chr5.1:66186042-66186061 | None:intergenic | 25.0% |
| ! | GTTAAGATATGCAAATTACT+TGG | - | chr5.1:66186240-66186259 | MS.gene81705:CDS | 25.0% |
| ! | GTTCATATTTACATTAACTG+GGG | + | chr5.1:66184496-66184515 | None:intergenic | 25.0% |
| ! | TCATAAAGAGGTAGAAATTA+GGG | - | chr5.1:66185413-66185432 | MS.gene81705:intron | 25.0% |
| ! | TTCATAAAGAGGTAGAAATT+AGG | - | chr5.1:66185412-66185431 | MS.gene81705:intron | 25.0% |
| !! | TGGTTTAGTTGAATTTTGAA+TGG | - | chr5.1:66182926-66182945 | MS.gene81705:intron | 25.0% |
| !! | TTATCAGTTGATATCAAGTA+CGG | - | chr5.1:66184603-66184622 | MS.gene81705:intron | 25.0% |
| !!! | AGAAGTATTGCTTCAAAATA+AGG | - | chr5.1:66184688-66184707 | MS.gene81705:intron | 25.0% |
| !!! | GAAGTATTGCTTCAAAATAA+GGG | - | chr5.1:66184689-66184708 | MS.gene81705:intron | 25.0% |
| !!! | GACAGATGAAAAGTATTTTA+AGG | - | chr5.1:66185811-66185830 | MS.gene81705:intron | 25.0% |
| !!! | GTTTTTATTTCTTCTCTTCA+CGG | - | chr5.1:66184835-66184854 | MS.gene81705:intron | 25.0% |
| !!! | TCTCTCTCATTTTTCTTTTT+GGG | - | chr5.1:66182902-66182921 | MS.gene81705:CDS | 25.0% |
| !!! | TGAATTGTTGATTCAGTTTT+GGG | - | chr5.1:66184978-66184997 | MS.gene81705:intron | 25.0% |
| AAAGGTCCTACATAATGATT+AGG | + | chr5.1:66183567-66183586 | None:intergenic | 30.0% | |
| AAATTCAATCAACTCACTTC+AGG | + | chr5.1:66186372-66186391 | None:intergenic | 30.0% | |
| AAGAATTCATCATAGATGCT+TGG | - | chr5.1:66186133-66186152 | MS.gene81705:intron | 30.0% | |
| AAGGTCCTACATAATGATTA+GGG | + | chr5.1:66183566-66183585 | None:intergenic | 30.0% | |
| AATAAGAAATGCTGGAGTAA+AGG | - | chr5.1:66185993-66186012 | MS.gene81705:CDS | 30.0% | |
| AATCAACACAATTCACAAGA+TGG | + | chr5.1:66183105-66183124 | None:intergenic | 30.0% | |
| AGGTTGAATTCACAACATAA+TGG | - | chr5.1:66185721-66185740 | MS.gene81705:intron | 30.0% | |
| AGTAGGAATGTTTCATAATG+AGG | - | chr5.1:66183491-66183510 | MS.gene81705:intron | 30.0% | |
| ATGAATTCTTTGCACAACAA+AGG | + | chr5.1:66186123-66186142 | None:intergenic | 30.0% | |
| ATGGTTATGTTTAGATGGTT+GGG | - | chr5.1:66187031-66187050 | MS.gene81705:CDS | 30.0% | |
| ATGTATTTGATGTCAAGATC+AGG | + | chr5.1:66186219-66186238 | None:intergenic | 30.0% | |
| ATGTGTGGAACAAATATCAA+AGG | + | chr5.1:66185680-66185699 | None:intergenic | 30.0% | |
| ATTGCTCAATCTTATGAGAA+AGG | - | chr5.1:66185764-66185783 | MS.gene81705:intron | 30.0% | |
| ATTTAACCAACGAGATTCAA+AGG | + | chr5.1:66184246-66184265 | None:intergenic | 30.0% | |
| CAAACATAATCCAAGATTAC+AGG | + | chr5.1:66185594-66185613 | None:intergenic | 30.0% | |
| CAAACTGGGTAAACAAATAT+TGG | - | chr5.1:66185545-66185564 | MS.gene81705:intron | 30.0% | |
| CAAGTATGAAATCTACAGAT+AGG | - | chr5.1:66186452-66186471 | MS.gene81705:intron | 30.0% | |
| CAATATTTGTTTACCCAGTT+TGG | + | chr5.1:66185547-66185566 | None:intergenic | 30.0% | |
| GATTCAGTGTTGTCAAATAA+CGG | - | chr5.1:66184057-66184076 | MS.gene81705:intron | 30.0% | |
| GGAAATCAAAACAAACTTAC+TGG | + | chr5.1:66183934-66183953 | None:intergenic | 30.0% | |
| GTAAAACAGCAGCAATTAAA+AGG | + | chr5.1:66186197-66186216 | None:intergenic | 30.0% | |
| GTAATCTTGGATTATGTTTG+TGG | - | chr5.1:66185594-66185613 | MS.gene81705:intron | 30.0% | |
| TAGCTATTATAGTGTAAGCT+TGG | - | chr5.1:66186345-66186364 | MS.gene81705:CDS | 30.0% | |
| TATGGTTATGTTTAGATGGT+TGG | - | chr5.1:66187030-66187049 | MS.gene81705:CDS | 30.0% | |
| TATTCTCTTACCTGTAATCT+TGG | - | chr5.1:66185581-66185600 | MS.gene81705:intron | 30.0% | |
| TCTCCTTATTCTTATACCTT+GGG | + | chr5.1:66183526-66183545 | None:intergenic | 30.0% | |
| TGAAAAAGGGGTAGAAATTA+GGG | - | chr5.1:66185333-66185352 | MS.gene81705:intron | 30.0% | |
| TGAATTCTTTGCACAACAAA+GGG | + | chr5.1:66186122-66186141 | None:intergenic | 30.0% | |
| TGATCTTGACATCAAATACA+TGG | - | chr5.1:66186218-66186237 | MS.gene81705:CDS | 30.0% | |
| TGTTTCTCAATAACTAGTAC+AGG | - | chr5.1:66184651-66184670 | MS.gene81705:intron | 30.0% | |
| TTCTCCTTATTCTTATACCT+TGG | + | chr5.1:66183527-66183546 | None:intergenic | 30.0% | |
| TTGAAAAAGGGGTAGAAATT+AGG | - | chr5.1:66185332-66185351 | MS.gene81705:intron | 30.0% | |
| TTGGAGTTAATAAGAAATGC+TGG | - | chr5.1:66185985-66186004 | MS.gene81705:CDS | 30.0% | |
| TTGTGCTTATGTGAACTATT+TGG | - | chr5.1:66183727-66183746 | MS.gene81705:intron | 30.0% | |
| TTTAACCAACGAGATTCAAA+GGG | + | chr5.1:66184245-66184264 | None:intergenic | 30.0% | |
| TTTCTCTCTTGATTTCTCTT+AGG | - | chr5.1:66185287-66185306 | MS.gene81705:intron | 30.0% | |
| ! | AAACACTTTTCATTCACCTT+GGG | - | chr5.1:66185232-66185251 | MS.gene81705:intron | 30.0% |
| ! | ACGTTGAAGTTTGAAAGTTT+TGG | - | chr5.1:66184909-66184928 | MS.gene81705:intron | 30.0% |
| ! | TGTTAGATATGTTGCTTGAA+GGG | + | chr5.1:66184806-66184825 | None:intergenic | 30.0% |
| ! | TTCTTAAAAGTTCCCTCTTT+TGG | + | chr5.1:66185163-66185182 | None:intergenic | 30.0% |
| !! | ATTTGGTGTTATGATTATGG+TGG | - | chr5.1:66183050-66183069 | MS.gene81705:CDS | 30.0% |
| !! | CTATAAGTATTGACTTGAGT+TGG | + | chr5.1:66182774-66182793 | None:intergenic | 30.0% |
| !! | CTCTCTCATTTTTCTTTTTG+GGG | - | chr5.1:66182903-66182922 | MS.gene81705:CDS | 30.0% |
| !! | GGAACTTTTAAGAAACTTAG+AGG | - | chr5.1:66185169-66185188 | MS.gene81705:intron | 30.0% |
| !! | GTCTCTCTCATTTTTCTTTT+TGG | - | chr5.1:66182901-66182920 | MS.gene81705:CDS | 30.0% |
| !! | TCATTCATTTCATAGTGGAT+TGG | - | chr5.1:66185484-66185503 | MS.gene81705:intron | 30.0% |
| !! | TTTTATTTGAGTCATGCTTG+CGG | - | chr5.1:66184332-66184351 | MS.gene81705:intron | 30.0% |
| !! | TTTTTCTAGTGTCATAAGCA+TGG | + | chr5.1:66186085-66186104 | None:intergenic | 30.0% |
| !!! | AGTACGGTATACCTATTTTT+TGG | - | chr5.1:66184619-66184638 | MS.gene81705:intron | 30.0% |
| !!! | CTGAATTGTTGATTCAGTTT+TGG | - | chr5.1:66184977-66184996 | MS.gene81705:intron | 30.0% |
| !!! | GATTTTTGTTTTCTTGTCCA+GGG | - | chr5.1:66185949-66185968 | MS.gene81705:CDS | 30.0% |
| !!! | TGATTTTTGTTTTCTTGTCC+AGG | - | chr5.1:66185948-66185967 | MS.gene81705:CDS | 30.0% |
| !!! | TTGTTTTGATCATCTAATGC+AGG | - | chr5.1:66184390-66184409 | MS.gene81705:intron | 30.0% |
| AAAGTTAAGGAATGGGAAGT+AGG | - | chr5.1:66183474-66183493 | MS.gene81705:intron | 35.0% | |
| AAATACACCACGTAACATCT+TGG | - | chr5.1:66183611-66183630 | MS.gene81705:CDS | 35.0% | |
| AAGCACTCAAAGTTAAGGAA+TGG | - | chr5.1:66183466-66183485 | MS.gene81705:intron | 35.0% | |
| AGAAAGAAAACCCCTTCTTA+TGG | - | chr5.1:66183762-66183781 | MS.gene81705:intron | 35.0% | |
| AGCACTCAAAGTTAAGGAAT+GGG | - | chr5.1:66183467-66183486 | MS.gene81705:intron | 35.0% | |
| AGGTCCTACATAATGATTAG+GGG | + | chr5.1:66183565-66183584 | None:intergenic | 35.0% | |
| ATTAAGGTGAAGCATGATGA+TGG | - | chr5.1:66183241-66183260 | MS.gene81705:intron | 35.0% | |
| ATTGATTGCTGAAGTCAAGA+AGG | - | chr5.1:66183870-66183889 | MS.gene81705:intron | 35.0% | |
| ATTGCTTATGTACAAGAAGC+AGG | - | chr5.1:66187081-66187100 | MS.gene81705:CDS | 35.0% | |
| CAATAACTAGTACAGGTTCA+TGG | - | chr5.1:66184658-66184677 | MS.gene81705:intron | 35.0% | |
| CTACCCAAGGTATAAGAATA+AGG | - | chr5.1:66183520-66183539 | MS.gene81705:intron | 35.0% | |
| GAATCCTTGATTTCTCTCAA+GGG | - | chr5.1:66182696-66182715 | MS.gene81705:CDS | 35.0% | |
| GAATGGTATATGCGTTCAAT+TGG | - | chr5.1:66182943-66182962 | MS.gene81705:intron | 35.0% | |
| GATATGCAAATTACTTGGAC+TGG | - | chr5.1:66186245-66186264 | MS.gene81705:CDS | 35.0% | |
| GATTACAGGTAAGAGAATAG+AGG | + | chr5.1:66185580-66185599 | None:intergenic | 35.0% | |
| TCCAGCACAAATAAGAAACA+TGG | + | chr5.1:66186632-66186651 | None:intergenic | 35.0% | |
| TGATGCGATGCAAAAATACA+AGG | + | chr5.1:66184774-66184793 | None:intergenic | 35.0% | |
| TGGTTATGTTTAGATGGTTG+GGG | - | chr5.1:66187032-66187051 | MS.gene81705:CDS | 35.0% | |
| TGTACATAAGCAATGTCTTC+AGG | + | chr5.1:66187075-66187094 | None:intergenic | 35.0% | |
| TTAACCAACGAGATTCAAAG+GGG | + | chr5.1:66184244-66184263 | None:intergenic | 35.0% | |
| TTAAGAAACTTAGAGGCGAA+GGG | - | chr5.1:66185176-66185195 | MS.gene81705:intron | 35.0% | |
| TTCTCTTAGGATCTCATTGT+GGG | - | chr5.1:66185300-66185319 | MS.gene81705:intron | 35.0% | |
| TTTAAGAAACTTAGAGGCGA+AGG | - | chr5.1:66185175-66185194 | MS.gene81705:intron | 35.0% | |
| TTTCTCTTAGGATCTCATTG+TGG | - | chr5.1:66185299-66185318 | MS.gene81705:intron | 35.0% | |
| ! | ATGTAGGACCTTTTCAATTC+CGG | - | chr5.1:66183574-66183593 | MS.gene81705:CDS | 35.0% |
| ! | ATTATGGTGGAGCATAATGA+AGG | - | chr5.1:66183063-66183082 | MS.gene81705:CDS | 35.0% |
| ! | CATGTGGGAAATGTTTGTTT+TGG | - | chr5.1:66184016-66184035 | MS.gene81705:CDS | 35.0% |
| ! | GAAACACTTTTCATTCACCT+TGG | - | chr5.1:66185231-66185250 | MS.gene81705:intron | 35.0% |
| ! | GAATCTCGTTGGTTAAATTC+AGG | - | chr5.1:66184248-66184267 | MS.gene81705:intron | 35.0% |
| ! | GGTCTACATAAAGCATTAGA+TGG | + | chr5.1:66186064-66186083 | None:intergenic | 35.0% |
| ! | GTGTTAGATATGTTGCTTGA+AGG | + | chr5.1:66184807-66184826 | None:intergenic | 35.0% |
| !! | AGTAGAGTGTTGTCAAATAG+TGG | - | chr5.1:66184137-66184156 | MS.gene81705:intron | 35.0% |
| !! | CATAATGGATTCTCTCTTAC+AGG | - | chr5.1:66185736-66185755 | MS.gene81705:intron | 35.0% |
| !! | TAAGTATTGACTTGAGTTGG+AGG | + | chr5.1:66182771-66182790 | None:intergenic | 35.0% |
| !! | TCTCATTTTTCTTTTTGGGG+TGG | - | chr5.1:66182906-66182925 | MS.gene81705:CDS | 35.0% |
| !!! | ACTCTTTTGAGACCAAAAGA+GGG | - | chr5.1:66185148-66185167 | MS.gene81705:intron | 35.0% |
| !!! | GTTTGTTCTAGAAGAGCTTT+TGG | - | chr5.1:66185355-66185374 | MS.gene81705:intron | 35.0% |
| !!! | TACTCTTTTGAGACCAAAAG+AGG | - | chr5.1:66185147-66185166 | MS.gene81705:intron | 35.0% |
| !!! | TGTGGCTTCTATTTTTTGTG+TGG | - | chr5.1:66186842-66186861 | MS.gene81705:intron | 35.0% |
| ACATCTTGGAAGAGATTGTG+TGG | - | chr5.1:66183625-66183644 | MS.gene81705:CDS | 40.0% | |
| ATCTCTTCCAAGATGTTACG+TGG | + | chr5.1:66183621-66183640 | None:intergenic | 40.0% | |
| ATTGTAGCCGAACCTTCATT+AGG | + | chr5.1:66183420-66183439 | None:intergenic | 40.0% | |
| CCAATATGACCTACATCTAG+GGG | + | chr5.1:66185523-66185542 | None:intergenic | 40.0% | |
| CCCAATATGACCTACATCTA+GGG | + | chr5.1:66185524-66185543 | None:intergenic | 40.0% | |
| CCCTAGATGTAGGTCATATT+GGG | - | chr5.1:66185521-66185540 | MS.gene81705:intron | 40.0% | |
| CTGAATCAGATATAGCCAGT+TGG | + | chr5.1:66184044-66184063 | None:intergenic | 40.0% | |
| GAAAACCCCTTCTTATGGTT+AGG | - | chr5.1:66183767-66183786 | MS.gene81705:intron | 40.0% | |
| GATAACCTCAAAGATCACAG+TGG | + | chr5.1:66183955-66183974 | None:intergenic | 40.0% | |
| GATCGTGTTCTTGGAATAGA+GGG | - | chr5.1:66186719-66186738 | MS.gene81705:intron | 40.0% | |
| GATTTCCACTGTGATCTTTG+AGG | - | chr5.1:66183947-66183966 | MS.gene81705:intron | 40.0% | |
| GCTCAATCTTATGAGAAAGG+TGG | - | chr5.1:66185767-66185786 | MS.gene81705:intron | 40.0% | |
| GCTTGAGACTGTTTGGTTAT+TGG | - | chr5.1:66185651-66185670 | MS.gene81705:intron | 40.0% | |
| GGAATCCTTGATTTCTCTCA+AGG | - | chr5.1:66182695-66182714 | MS.gene81705:CDS | 40.0% | |
| GGCATCAACAATCGTAATCT+TGG | - | chr5.1:66186755-66186774 | MS.gene81705:intron | 40.0% | |
| GGTCCTACATAATGATTAGG+GGG | + | chr5.1:66183564-66183583 | None:intergenic | 40.0% | |
| GTTACCCTTGAGAGAAATCA+AGG | + | chr5.1:66182703-66182722 | None:intergenic | 40.0% | |
| TAATGAACGAACTGGATTGC+CGG | - | chr5.1:66183846-66183865 | MS.gene81705:intron | 40.0% | |
| TGATGCTTGTCTAAGTCATG+TGG | + | chr5.1:66184557-66184576 | None:intergenic | 40.0% | |
| TTCTGCAACCGGAATTGAAA+AGG | + | chr5.1:66183585-66183604 | None:intergenic | 40.0% | |
| TTGAAAATGCACCTCCTGTT+CGG | - | chr5.1:66183797-66183816 | MS.gene81705:CDS | 40.0% | |
| TTGACTTCAGCAATCAATCC+CGG | + | chr5.1:66183868-66183887 | None:intergenic | 40.0% | |
| TTGCTGATCACAGAAACTAG+CGG | + | chr5.1:66184208-66184227 | None:intergenic | 40.0% | |
| ! | AATAACGGCTCTAGCACTAT+AGG | - | chr5.1:66184072-66184091 | MS.gene81705:intron | 40.0% |
| ! | ATAACGGCTCTAGCACTATA+GGG | - | chr5.1:66184073-66184092 | MS.gene81705:intron | 40.0% |
| ! | CCAAATTTTCAAAGCTTCCC+TGG | + | chr5.1:66185969-66185988 | None:intergenic | 40.0% |
| ! | CTCCTGTTCGGGATTTTATT+GGG | - | chr5.1:66183809-66183828 | MS.gene81705:CDS | 40.0% |
| ! | GATATGTTGCTTGAAGGGTT+TGG | + | chr5.1:66184801-66184820 | None:intergenic | 40.0% |
| ! | GCCATGTTTCTTATTTGTGC+TGG | - | chr5.1:66186628-66186647 | MS.gene81705:intron | 40.0% |
| ! | GGTTGAAGCACTCAAAGTTA+AGG | - | chr5.1:66183461-66183480 | MS.gene81705:intron | 40.0% |
| ! | TCCTGTTCGGGATTTTATTG+GGG | - | chr5.1:66183810-66183829 | MS.gene81705:CDS | 40.0% |
| ! | TGTTGTTGCTTGAGACTGTT+TGG | - | chr5.1:66185644-66185663 | MS.gene81705:intron | 40.0% |
| !! | AACAGGAGGTGCATTTTCAA+GGG | + | chr5.1:66183797-66183816 | None:intergenic | 40.0% |
| !! | CCAGGGAAGCTTTGAAAATT+TGG | - | chr5.1:66185966-66185985 | MS.gene81705:CDS | 40.0% |
| !! | GGATTTTATTGGGGCTCTAA+GGG | - | chr5.1:66183819-66183838 | MS.gene81705:intron | 40.0% |
| !! | TGCTTTTGGGTGAGATTCTT+GGG | - | chr5.1:66185204-66185223 | MS.gene81705:intron | 40.0% |
| !!! | ATGTTTGTTTTGGCTCCAAC+TGG | - | chr5.1:66184026-66184045 | MS.gene81705:CDS | 40.0% |
| AACCACAGATTCACCAGATG+TGG | + | chr5.1:66183445-66183464 | None:intergenic | 45.0% | |
| AAGAAGGCTTCACCAAGTAG+AGG | - | chr5.1:66183886-66183905 | MS.gene81705:intron | 45.0% | |
| AATGAACGAACTGGATTGCC+GGG | - | chr5.1:66183847-66183866 | MS.gene81705:intron | 45.0% | |
| ACAAGAACCAGCTACAGTGT+AGG | + | chr5.1:66186563-66186582 | None:intergenic | 45.0% | |
| ACACATCTAAGTTCGTGGTG+TGG | - | chr5.1:66185694-66185713 | MS.gene81705:intron | 45.0% | |
| ACACCACGAACTTAGATGTG+TGG | + | chr5.1:66185695-66185714 | None:intergenic | 45.0% | |
| ACCACGAAGAAGCTTCTTGA+AGG | - | chr5.1:66186894-66186913 | MS.gene81705:intron | 45.0% | |
| ACCCCTTCTTATGGTTAGGA+AGG | - | chr5.1:66183771-66183790 | MS.gene81705:intron | 45.0% | |
| AGGGAATTCGATCGTGTTCT+TGG | - | chr5.1:66186710-66186729 | MS.gene81705:intron | 45.0% | |
| AGGTCATATTGGGCCAAACT+GGG | - | chr5.1:66185531-66185550 | MS.gene81705:intron | 45.0% | |
| AGTTGGAGGAATAGTGGTTC+TGG | + | chr5.1:66182757-66182776 | None:intergenic | 45.0% | |
| ATAAGGAGAAGACCACCAAC+TGG | - | chr5.1:66183537-66183556 | MS.gene81705:CDS | 45.0% | |
| CCAATAAAATCCCGAACAGG+AGG | + | chr5.1:66183811-66183830 | None:intergenic | 45.0% | |
| CCCCTAGATGTAGGTCATAT+TGG | - | chr5.1:66185520-66185539 | MS.gene81705:intron | 45.0% | |
| CGATCGTGTTCTTGGAATAG+AGG | - | chr5.1:66186718-66186737 | MS.gene81705:intron | 45.0% | |
| CTCTACTATGCTCGATCGAA+AGG | - | chr5.1:66186159-66186178 | MS.gene81705:CDS | 45.0% | |
| GATTAGGCAGAGCCTAATGA+AGG | - | chr5.1:66183405-66183424 | MS.gene81705:intron | 45.0% | |
| GCAAAACTGTTCATTCCGCA+AGG | - | chr5.1:66184933-66184952 | MS.gene81705:intron | 45.0% | |
| GCCCAATATGACCTACATCT+AGG | + | chr5.1:66185525-66185544 | None:intergenic | 45.0% | |
| GCCTTCCTAACCATAAGAAG+GGG | + | chr5.1:66183775-66183794 | None:intergenic | 45.0% | |
| GCTACAACACTGTAGCATAG+CGG | - | chr5.1:66184170-66184189 | MS.gene81705:intron | 45.0% | |
| GGAAGAGATTGTGTGGAACA+AGG | - | chr5.1:66183632-66183651 | MS.gene81705:CDS | 45.0% | |
| GGACCCCCTAATCATTATGT+AGG | - | chr5.1:66183558-66183577 | MS.gene81705:CDS | 45.0% | |
| GGCCTTCCTAACCATAAGAA+GGG | + | chr5.1:66183776-66183795 | None:intergenic | 45.0% | |
| GGGTCGAACGACTTGAAAAA+GGG | - | chr5.1:66185320-66185339 | MS.gene81705:intron | 45.0% | |
| GGTCGAACGACTTGAAAAAG+GGG | - | chr5.1:66185321-66185340 | MS.gene81705:intron | 45.0% | |
| GGTGGTGAGATCTCATTAGA+GGG | - | chr5.1:66185253-66185272 | MS.gene81705:intron | 45.0% | |
| GTTCCACACATCTAAGTTCG+TGG | - | chr5.1:66185689-66185708 | MS.gene81705:intron | 45.0% | |
| GTTGGAGGAATAGTGGTTCT+GGG | + | chr5.1:66182756-66182775 | None:intergenic | 45.0% | |
| GTTTAGATGGTTGGGGAATC+TGG | - | chr5.1:66187039-66187058 | MS.gene81705:CDS | 45.0% | |
| TAAGTTCGTGGTGTGGTTTG+AGG | - | chr5.1:66185701-66185720 | MS.gene81705:intron | 45.0% | |
| TAATGAGATCTCACCACCCA+AGG | + | chr5.1:66185251-66185270 | None:intergenic | 45.0% | |
| TAATGATTAGGGGGTCCAGT+TGG | + | chr5.1:66183555-66183574 | None:intergenic | 45.0% | |
| TAGACCCCTTTGAATCTCGT+TGG | - | chr5.1:66184237-66184256 | MS.gene81705:intron | 45.0% | |
| TAGGTCATATTGGGCCAAAC+TGG | - | chr5.1:66185530-66185549 | MS.gene81705:intron | 45.0% | |
| TATTTCCCTCGTTCTGCAAC+CGG | + | chr5.1:66183596-66183615 | None:intergenic | 45.0% | |
| TCCTTCAAGAAGCTTCTTCG+TGG | + | chr5.1:66186898-66186917 | None:intergenic | 45.0% | |
| TCTCTCAAGATGCCTCTACT+TGG | + | chr5.1:66183901-66183920 | None:intergenic | 45.0% | |
| TGAAAATGCACCTCCTGTTC+GGG | - | chr5.1:66183798-66183817 | MS.gene81705:CDS | 45.0% | |
| TGGGATTGGAAGAGAACGAA+GGG | + | chr5.1:66182737-66182756 | None:intergenic | 45.0% | |
| TGGGTCGAACGACTTGAAAA+AGG | - | chr5.1:66185319-66185338 | MS.gene81705:intron | 45.0% | |
| TGTGATACCTACACTGTAGC+TGG | - | chr5.1:66186553-66186572 | MS.gene81705:intron | 45.0% | |
| TTGGGTGAGATTCTTGGGTT+GGG | - | chr5.1:66185209-66185228 | MS.gene81705:intron | 45.0% | |
| TTTGGGTGAGATTCTTGGGT+TGG | - | chr5.1:66185208-66185227 | MS.gene81705:intron | 45.0% | |
| ! | CACTTTTCATTCACCTTGGG+TGG | - | chr5.1:66185235-66185254 | MS.gene81705:intron | 45.0% |
| ! | CCTCCTGTTCGGGATTTTAT+TGG | - | chr5.1:66183808-66183827 | MS.gene81705:CDS | 45.0% |
| ! | GCGAAGGGTTAAGTGCTTTT+GGG | - | chr5.1:66185191-66185210 | MS.gene81705:intron | 45.0% |
| ! | GGGATTTTATTGGGGCTCTA+AGG | - | chr5.1:66183818-66183837 | MS.gene81705:intron | 45.0% |
| ! | TACGTTTTCTGTTCGAGCAC+AGG | - | chr5.1:66182809-66182828 | MS.gene81705:intron | 45.0% |
| !! | AGGAATAGTGGTTCTGGGAT+TGG | + | chr5.1:66182751-66182770 | None:intergenic | 45.0% |
| !! | GAACAGGAGGTGCATTTTCA+AGG | + | chr5.1:66183798-66183817 | None:intergenic | 45.0% |
| !! | GAAGCCACAGTTGATGACTA+AGG | + | chr5.1:66186831-66186850 | None:intergenic | 45.0% |
| !! | GACTTGAGTTGGAGGAATAG+TGG | + | chr5.1:66182763-66182782 | None:intergenic | 45.0% |
| !! | GTGCTTTTGGGTGAGATTCT+TGG | - | chr5.1:66185203-66185222 | MS.gene81705:intron | 45.0% |
| !!! | TTTTATTGGGGCTCTAAGGG+CGG | - | chr5.1:66183822-66183841 | MS.gene81705:intron | 45.0% |
| AAGCTTCTTGAAGGAGAGCG+AGG | - | chr5.1:66186903-66186922 | MS.gene81705:intron | 50.0% | |
| AATGAGGTTGCTGCTACCCA+AGG | - | chr5.1:66183507-66183526 | MS.gene81705:intron | 50.0% | |
| ACACGCAACACGCTAAACAG+TGG | + | chr5.1:66184867-66184886 | None:intergenic | 50.0% | |
| AGCCACATCTGGTGAATCTG+TGG | - | chr5.1:66183440-66183459 | MS.gene81705:intron | 50.0% | |
| CAATCGAGCGTCATGCACAT+AGG | + | chr5.1:66186310-66186329 | None:intergenic | 50.0% | |
| CAATTCCGGTTGCAGAACGA+GGG | - | chr5.1:66183588-66183607 | MS.gene81705:CDS | 50.0% | |
| CGGACCTTAGTCATCAACTG+TGG | - | chr5.1:66186824-66186843 | MS.gene81705:intron | 50.0% | |
| CTATGTGCATGACGCTCGAT+TGG | - | chr5.1:66186308-66186327 | MS.gene81705:CDS | 50.0% | |
| CTGGGATTGGAAGAGAACGA+AGG | + | chr5.1:66182738-66182757 | None:intergenic | 50.0% | |
| GCCCCAATAAAATCCCGAAC+AGG | + | chr5.1:66183814-66183833 | None:intergenic | 50.0% | |
| GCTCTAGCACTATAGGGTAG+TGG | - | chr5.1:66184079-66184098 | MS.gene81705:intron | 50.0% | |
| GGCAGAGCCTAATGAAGGTT+CGG | - | chr5.1:66183410-66183429 | MS.gene81705:intron | 50.0% | |
| GGGCCTTCCTAACCATAAGA+AGG | + | chr5.1:66183777-66183796 | None:intergenic | 50.0% | |
| GGGTGGTGAGATCTCATTAG+AGG | - | chr5.1:66185252-66185271 | MS.gene81705:intron | 50.0% | |
| GGTGAGATCTCATTAGAGGG+AGG | - | chr5.1:66185256-66185275 | MS.gene81705:intron | 50.0% | |
| TCAATTCCGGTTGCAGAACG+AGG | - | chr5.1:66183587-66183606 | MS.gene81705:CDS | 50.0% | |
| TCGGCTACAATAGCCACATC+TGG | - | chr5.1:66183429-66183448 | MS.gene81705:intron | 50.0% | |
| ! | GGCGAAGGGTTAAGTGCTTT+TGG | - | chr5.1:66185190-66185209 | MS.gene81705:intron | 50.0% |
| ! | TTTTCCCTGCCAAAACCGCA+AGG | - | chr5.1:66185004-66185023 | MS.gene81705:intron | 50.0% |
| !! | ATAGAGGGCGTTGAGCTCAT+TGG | - | chr5.1:66186734-66186753 | MS.gene81705:intron | 50.0% |
| AGGGCGGCTAATGAACGAAC+TGG | - | chr5.1:66183838-66183857 | MS.gene81705:intron | 55.0% | |
| CAAGGACAAAGAAGTCGCGC+AGG | - | chr5.1:66183650-66183669 | MS.gene81705:CDS | 55.0% | |
| CTCCTCTCTCCCCTAGATGT+AGG | - | chr5.1:66185511-66185530 | MS.gene81705:intron | 55.0% | |
| CTTGCACCCAGTGGACCATT+GGG | - | chr5.1:66185044-66185063 | MS.gene81705:intron | 55.0% | |
| GACCTACATCTAGGGGAGAG+AGG | + | chr5.1:66185516-66185535 | None:intergenic | 55.0% | |
| TGATTAGGGGGTCCAGTTGG+TGG | + | chr5.1:66183552-66183571 | None:intergenic | 55.0% | |
| !! | ATTCCGCAAGGCGTTGACAG+AGG | - | chr5.1:66184945-66184964 | MS.gene81705:intron | 55.0% |
| !! | TGGACTGGCAGCTCTTGTTG+AGG | - | chr5.1:66186260-66186279 | MS.gene81705:CDS | 55.0% |
| !! | TTCCGCAAGGCGTTGACAGA+GGG | - | chr5.1:66184946-66184965 | MS.gene81705:intron | 55.0% |
| ACCCAGTGGACCATTGGGCA+GGG | - | chr5.1:66185049-66185068 | MS.gene81705:intron | 60.0% | |
| CCAATGGTCCACTGGGTGCA+AGG | + | chr5.1:66185046-66185065 | None:intergenic | 60.0% | |
| CCTTGCACCCAGTGGACCAT+TGG | - | chr5.1:66185043-66185062 | MS.gene81705:intron | 60.0% | |
| TCCCTGCCAAAACCGCAAGG+CGG | - | chr5.1:66185007-66185026 | MS.gene81705:intron | 60.0% | |
| !! | TCCGCAAGGCGTTGACAGAG+GGG | - | chr5.1:66184947-66184966 | MS.gene81705:intron | 60.0% |
| AAACCGCAAGGCGGCCTCAC+TGG | - | chr5.1:66185016-66185035 | MS.gene81705:intron | 65.0% | |
| AACCGCAAGGCGGCCTCACT+GGG | - | chr5.1:66185017-66185036 | MS.gene81705:intron | 65.0% | |
| ACCCCTGCCCAATGGTCCAC+TGG | + | chr5.1:66185054-66185073 | None:intergenic | 65.0% | |
| CACCCAGTGGACCATTGGGC+AGG | - | chr5.1:66185048-66185067 | MS.gene81705:intron | 65.0% | |
| CACCTTGCACCCCTGCCCAA+TGG | + | chr5.1:66185062-66185081 | None:intergenic | 65.0% | |
| CCCAGTGGACCATTGGGCAG+GGG | - | chr5.1:66185050-66185069 | MS.gene81705:intron | 65.0% | |
| CCCCTGCCCAATGGTCCACT+GGG | + | chr5.1:66185053-66185072 | None:intergenic | 65.0% | |
| GCCCCTCTGTCAACGCCTTG+CGG | + | chr5.1:66184951-66184970 | None:intergenic | 65.0% | |
| GGGTGCAAGGTGCAGGGACT+AGG | - | chr5.1:66185070-66185089 | MS.gene81705:intron | 65.0% | |
| ! | GACCATTGGGCAGGGGTGCA+AGG | - | chr5.1:66185057-66185076 | MS.gene81705:intron | 65.0% |
| ! | GTGAGGCCGCCTTGCGGTTT+TGG | + | chr5.1:66185016-66185035 | None:intergenic | 65.0% |
| !! | GCCGCCTTGCGGTTTTGGCA+GGG | + | chr5.1:66185011-66185030 | None:intergenic | 65.0% |
| ACCCCAGTGAGGCCGCCTTG+CGG | + | chr5.1:66185022-66185041 | None:intergenic | 70.0% | |
| ACCGCAAGGCGGCCTCACTG+GGG | - | chr5.1:66185018-66185037 | MS.gene81705:intron | 70.0% | |
| ! | CTGGGGTGCCTTGCACCCAG+TGG | - | chr5.1:66185035-66185054 | MS.gene81705:intron | 70.0% |
| ! | GGGCAGGGGTGCAAGGTGCA+GGG | - | chr5.1:66185064-66185083 | MS.gene81705:intron | 70.0% |
| ! | GGGTGCAAGGCACCCCAGTG+AGG | + | chr5.1:66185033-66185052 | None:intergenic | 70.0% |
| ! | TGGGCAGGGGTGCAAGGTGC+AGG | - | chr5.1:66185063-66185082 | MS.gene81705:intron | 70.0% |
| !! | GGCCGCCTTGCGGTTTTGGC+AGG | + | chr5.1:66185012-66185031 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 66182693 | 66187113 | 66182693 | ID=MS.gene81705 |
| chr5.1 | mRNA | 66182693 | 66187113 | 66182693 | ID=MS.gene81705.t1;Parent=MS.gene81705 |
| chr5.1 | exon | 66186976 | 66187113 | 66186976 | ID=MS.gene81705.t1.exon1;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66186976 | 66187113 | 66186976 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66186135 | 66186395 | 66186135 | ID=MS.gene81705.t1.exon2;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66186135 | 66186395 | 66186135 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66185873 | 66186049 | 66185873 | ID=MS.gene81705.t1.exon3;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66185873 | 66186049 | 66185873 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66183974 | 66184048 | 66183974 | ID=MS.gene81705.t1.exon4;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66183974 | 66184048 | 66183974 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66183792 | 66183836 | 66183792 | ID=MS.gene81705.t1.exon5;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66183792 | 66183836 | 66183792 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66183525 | 66183689 | 66183525 | ID=MS.gene81705.t1.exon6;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66183525 | 66183689 | 66183525 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66183030 | 66183108 | 66183030 | ID=MS.gene81705.t1.exon7;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66183030 | 66183108 | 66183030 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66182853 | 66182935 | 66182853 | ID=MS.gene81705.t1.exon8;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66182853 | 66182935 | 66182853 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| chr5.1 | exon | 66182693 | 66182761 | 66182693 | ID=MS.gene81705.t1.exon9;Parent=MS.gene81705.t1 |
| chr5.1 | CDS | 66182693 | 66182761 | 66182693 | ID=cds.MS.gene81705.t1;Parent=MS.gene81705.t1 |
| Gene Sequence |
| Protein sequence |
