Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81736.t1 | KEH42038.1 | 92.3 | 376 | 15 | 1 | 1 | 362 | 1 | 376 | 3.10E-205 | 724.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81736.t1 | A0A072VKS7 | 92.3 | 376 | 15 | 1 | 1 | 362 | 1 | 376 | 2.2e-205 | 724.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04991 | MS.gene81736 | 0.809437 | 1.89E-50 | -1.69E-46 |
| MS.gene056868 | MS.gene81736 | 0.829257 | 5.70E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81736.t1 | MTR_1g060150 | 92.287 | 376 | 15 | 1 | 1 | 362 | 1 | 376 | 0.0 | 709 |
| MS.gene81736.t1 | MTR_1g060130 | 90.160 | 376 | 23 | 1 | 1 | 362 | 1 | 376 | 0.0 | 696 |
| MS.gene81736.t1 | MTR_1g050458 | 60.588 | 340 | 121 | 1 | 33 | 359 | 1 | 340 | 6.43e-157 | 444 |
| MS.gene81736.t1 | MTR_1g050458 | 57.798 | 327 | 122 | 2 | 33 | 359 | 1 | 311 | 6.20e-140 | 400 |
| MS.gene81736.t1 | MTR_2g086290 | 51.603 | 343 | 142 | 4 | 33 | 359 | 2 | 336 | 9.63e-131 | 377 |
| MS.gene81736.t1 | MTR_2g086300 | 48.457 | 324 | 145 | 5 | 51 | 359 | 28 | 344 | 6.03e-107 | 318 |
| MS.gene81736.t1 | MTR_4g053620 | 45.272 | 349 | 163 | 6 | 33 | 359 | 1 | 343 | 3.00e-103 | 308 |
| MS.gene81736.t1 | MTR_3g104770 | 45.033 | 302 | 146 | 4 | 73 | 359 | 130 | 426 | 4.78e-90 | 277 |
| MS.gene81736.t1 | MTR_4g060900 | 30.503 | 318 | 173 | 6 | 68 | 343 | 119 | 430 | 2.16e-39 | 146 |
| MS.gene81736.t1 | MTR_7g100780 | 28.529 | 340 | 192 | 7 | 67 | 361 | 151 | 484 | 5.02e-36 | 137 |
| MS.gene81736.t1 | MTR_2g086330 | 50.980 | 51 | 25 | 0 | 293 | 343 | 1 | 51 | 1.57e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81736.t1 | AT3G48410 | 62.022 | 366 | 123 | 2 | 7 | 359 | 9 | 371 | 6.67e-169 | 476 |
| MS.gene81736.t1 | AT3G48410 | 62.192 | 365 | 122 | 2 | 8 | 359 | 52 | 413 | 2.87e-168 | 476 |
| MS.gene81736.t1 | AT2G36290 | 62.464 | 349 | 114 | 2 | 31 | 362 | 15 | 363 | 2.27e-166 | 469 |
| MS.gene81736.t1 | AT2G36290 | 62.248 | 347 | 114 | 2 | 33 | 362 | 3 | 349 | 1.29e-164 | 464 |
| MS.gene81736.t1 | AT1G74300 | 63.222 | 329 | 106 | 2 | 46 | 359 | 16 | 344 | 3.83e-157 | 445 |
| MS.gene81736.t1 | AT1G74280 | 60.671 | 328 | 114 | 2 | 47 | 359 | 34 | 361 | 5.42e-149 | 425 |
| MS.gene81736.t1 | AT1G74290 | 55.769 | 364 | 138 | 5 | 9 | 355 | 1 | 358 | 7.01e-145 | 415 |
| MS.gene81736.t1 | AT3G54240 | 52.339 | 342 | 150 | 1 | 33 | 361 | 5 | 346 | 2.17e-137 | 395 |
| MS.gene81736.t1 | AT5G22460 | 49.560 | 341 | 154 | 3 | 33 | 359 | 2 | 338 | 3.92e-121 | 353 |
| MS.gene81736.t1 | AT5G22460 | 49.560 | 341 | 154 | 3 | 33 | 359 | 2 | 338 | 3.92e-121 | 353 |
| MS.gene81736.t1 | AT5G22460 | 49.560 | 341 | 154 | 3 | 33 | 359 | 2 | 338 | 3.92e-121 | 353 |
| MS.gene81736.t1 | AT1G74300 | 61.633 | 245 | 80 | 1 | 129 | 359 | 1 | 245 | 2.93e-110 | 322 |
| MS.gene81736.t1 | AT3G03240 | 47.020 | 302 | 139 | 5 | 71 | 357 | 35 | 330 | 2.00e-94 | 285 |
| MS.gene81736.t1 | AT3G44510 | 45.902 | 305 | 142 | 4 | 73 | 359 | 8 | 307 | 2.99e-91 | 276 |
| MS.gene81736.t1 | AT3G03230 | 46.512 | 301 | 141 | 4 | 71 | 357 | 35 | 329 | 2.31e-90 | 275 |
| MS.gene81736.t1 | AT1G08310 | 43.322 | 307 | 154 | 4 | 68 | 359 | 5 | 306 | 3.49e-87 | 266 |
| MS.gene81736.t1 | AT1G08310 | 43.648 | 307 | 150 | 5 | 68 | 359 | 5 | 303 | 8.85e-86 | 262 |
| MS.gene81736.t1 | AT3G44510 | 47.534 | 223 | 111 | 3 | 73 | 295 | 8 | 224 | 6.21e-66 | 209 |
| MS.gene81736.t1 | AT1G08310 | 47.805 | 205 | 101 | 3 | 68 | 271 | 5 | 204 | 5.92e-61 | 196 |
| MS.gene81736.t1 | AT3G44510 | 39.409 | 203 | 103 | 3 | 175 | 359 | 1 | 201 | 4.88e-46 | 157 |
| MS.gene81736.t1 | AT3G44510 | 39.409 | 203 | 103 | 3 | 175 | 359 | 1 | 201 | 4.88e-46 | 157 |
| MS.gene81736.t1 | AT3G44510 | 39.409 | 203 | 103 | 3 | 175 | 359 | 1 | 201 | 4.88e-46 | 157 |
| MS.gene81736.t1 | AT3G09690 | 27.760 | 317 | 185 | 7 | 68 | 343 | 160 | 473 | 7.29e-34 | 131 |
| MS.gene81736.t1 | AT3G09690 | 27.760 | 317 | 185 | 7 | 68 | 343 | 160 | 473 | 7.29e-34 | 131 |
| MS.gene81736.t1 | AT5G02970 | 25.474 | 369 | 219 | 8 | 40 | 360 | 129 | 489 | 1.68e-31 | 124 |
Find 115 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATATTGGATTTGGAAAA+TGG | 0.113721 | 1.3:-43578882 | MS.gene81736:CDS |
| CCATCTCTTAGTTTGATTCT+TGG | 0.143000 | 1.3:+43581579 | None:intergenic |
| CAGGATGTTGTCAAGGAATT+AGG | 0.172204 | 1.3:-43581341 | MS.gene81736:CDS |
| CCAGTAATCACACTAATAAT+TGG | 0.177238 | 1.3:+43580671 | None:intergenic |
| CACTAGCAGTGTTGTTTATT+GGG | 0.228617 | 1.3:-43581683 | MS.gene81736:CDS |
| AGAGGATTTGTTGGCCCTTC+TGG | 0.231299 | 1.3:+43583913 | None:intergenic |
| TTATGCTTTGCCACGTCTTT+AGG | 0.245230 | 1.3:+43581525 | None:intergenic |
| ACACTAGCAGTGTTGTTTAT+TGG | 0.245373 | 1.3:-43581684 | MS.gene81736:CDS |
| TTGATTCTTGGTGCTGTTAT+AGG | 0.262071 | 1.3:+43581591 | None:intergenic |
| CCCTGGGTGGGCAAATTGTT+TGG | 0.268394 | 1.3:-43581175 | MS.gene81736:CDS |
| CGTGACTTGAATATTGGATT+TGG | 0.273224 | 1.3:-43578889 | MS.gene81736:CDS |
| GCAAGGAGATGAAGATATTA+TGG | 0.279264 | 1.3:-43578797 | MS.gene81736:CDS |
| ATGAAGGTTCTGTTCATCTT+TGG | 0.280021 | 1.3:-43578819 | MS.gene81736:CDS |
| ATGCTCTTTAATGTACGATT+TGG | 0.280505 | 1.3:+43581266 | None:intergenic |
| CCAATTATTAGTGTGATTAC+TGG | 0.288987 | 1.3:-43580671 | MS.gene81736:CDS |
| GCTGGCAGGTGCAGCGCTCT+TGG | 0.294662 | 1.3:-43580843 | MS.gene81736:CDS |
| AGTACCAATGACATAGAATT+TGG | 0.298887 | 1.3:+43581199 | None:intergenic |
| CTCCACCGTGACTTGAATAT+TGG | 0.300790 | 1.3:-43578895 | MS.gene81736:CDS |
| GAACCTTCATTGTTTGGAAA+TGG | 0.313934 | 1.3:+43578832 | None:intergenic |
| TGAACAGAACCTTCATTGTT+TGG | 0.321816 | 1.3:+43578826 | None:intergenic |
| GCTTGCTGATCAATTGGAAT+TGG | 0.321990 | 1.3:-43581225 | MS.gene81736:CDS |
| TGGCCCCAGTCGTCAACTTC+TGG | 0.327316 | 1.3:-43580823 | MS.gene81736:CDS |
| AGCAAGCTCTTCTATATCTA+AGG | 0.347016 | 1.3:+43581241 | None:intergenic |
| ATGTAATTTCCATTGGGAAT+AGG | 0.350187 | 1.3:+43580766 | None:intergenic |
| AGGATGTTGTCAAGGAATTA+GGG | 0.352902 | 1.3:-43581340 | MS.gene81736:CDS |
| TATAGAAAATTACGGGTGAT+AGG | 0.365312 | 1.3:+43581445 | None:intergenic |
| CTTGCTGATCAATTGGAATT+GGG | 0.366848 | 1.3:-43581224 | MS.gene81736:CDS |
| TACCATGAACTTCCAGGTTC+TGG | 0.368062 | 1.3:-43578724 | MS.gene81736:CDS |
| GCTTCGGCCGTTAAGTTTGC+AGG | 0.370202 | 1.3:+43580788 | None:intergenic |
| CTATGTCATTGGTACTTCCC+TGG | 0.384922 | 1.3:-43581192 | MS.gene81736:CDS |
| TCCTTTGATAGACCTGGTTA+TGG | 0.390537 | 1.3:-43581305 | MS.gene81736:CDS |
| TCTTGTTTCGAAAGGATGTC+TGG | 0.393461 | 1.3:+43580644 | None:intergenic |
| ACACGCCATGGCTAACATAC+TGG | 0.404122 | 1.3:-43580715 | MS.gene81736:CDS |
| GAATATTGGATTTGGAAAAT+GGG | 0.404775 | 1.3:-43578881 | MS.gene81736:CDS |
| AGAAGAGCTTGCTGATCAAT+TGG | 0.413236 | 1.3:-43581231 | MS.gene81736:CDS |
| GTTCACTACCATGAACTTCC+AGG | 0.414844 | 1.3:-43578730 | MS.gene81736:CDS |
| ACCTGTGAGGTATGTGCTTA+AGG | 0.425144 | 1.3:+43581147 | None:intergenic |
| GTTAAGTTTGCAGGAAGATC+AGG | 0.425710 | 1.3:+43580797 | None:intergenic |
| AAAATGGGAATATACTCCTT+TGG | 0.430264 | 1.3:-43578866 | MS.gene81736:CDS |
| GGCCACCTCTTCCCTCATGC+TGG | 0.430633 | 1.3:-43578703 | MS.gene81736:CDS |
| TCCATGGTTTCAGCAGTTGC+AGG | 0.431477 | 1.3:-43581491 | MS.gene81736:CDS |
| TTTCCATTGGGAATAGGCTT+CGG | 0.432983 | 1.3:+43580772 | None:intergenic |
| GGGTCCAAATTCTATGTCAT+TGG | 0.433593 | 1.3:-43581203 | MS.gene81736:CDS |
| CAGTAATCACACTAATAATT+GGG | 0.436521 | 1.3:+43580672 | None:intergenic |
| CTGAAAAGAAGAGGATTTGT+TGG | 0.442436 | 1.3:+43583904 | None:intergenic |
| ATTGGTCATGTAATTTCCAT+TGG | 0.443960 | 1.3:+43580759 | None:intergenic |
| ACTAAGAGATGGAAGGCATT+TGG | 0.447348 | 1.3:-43581568 | MS.gene81736:CDS |
| GTTTATTGGGGTTATAGCAT+GGG | 0.456525 | 1.3:-43581670 | MS.gene81736:CDS |
| TGTTTATTGGGGTTATAGCA+TGG | 0.459471 | 1.3:-43581671 | MS.gene81736:CDS |
| TTCAATACTGACAGGCTGGC+AGG | 0.460536 | 1.3:-43580857 | MS.gene81736:intron |
| GGGAAGAGGTGGCCAGAACC+TGG | 0.461101 | 1.3:+43578712 | None:intergenic |
| TATGTCATTGGTACTTCCCT+GGG | 0.461289 | 1.3:-43581191 | MS.gene81736:CDS |
| TTGGTCATGTAATTTCCATT+GGG | 0.464250 | 1.3:+43580760 | None:intergenic |
| GCCTGCAACTGCTGAAACCA+TGG | 0.467218 | 1.3:+43581490 | None:intergenic |
| AATCCATTTCCAAACAATGA+AGG | 0.474443 | 1.3:-43578835 | MS.gene81736:CDS |
| CTTTAATGTACGATTTGGAT+CGG | 0.475587 | 1.3:+43581271 | None:intergenic |
| TTTAATGTACGATTTGGATC+GGG | 0.479858 | 1.3:+43581272 | None:intergenic |
| TGATCTTCCTGCAAACTTAA+CGG | 0.480686 | 1.3:-43580795 | MS.gene81736:CDS |
| ATAGAAAATTACGGGTGATA+GGG | 0.484130 | 1.3:+43581446 | None:intergenic |
| GGCCAGAACCTGGAAGTTCA+TGG | 0.494202 | 1.3:+43578722 | None:intergenic |
| ATGTATCGTTGTAGTGTGAC+AGG | 0.520150 | 1.3:+43578772 | None:intergenic |
| ATGGAAATTACATGACCAAT+GGG | 0.522449 | 1.3:-43580756 | MS.gene81736:CDS |
| TCCAAACAATTTGCCCACCC+AGG | 0.522645 | 1.3:+43581174 | None:intergenic |
| CATAAAATCATCTATGTCCA+TGG | 0.523307 | 1.3:-43581507 | MS.gene81736:CDS |
| GCTCTTTGTCTTGTTTCGAA+AGG | 0.526126 | 1.3:+43580636 | None:intergenic |
| GGCCACCAGAAGTTGACGAC+TGG | 0.528373 | 1.3:+43580818 | None:intergenic |
| GCCACCAGAAGTTGACGACT+GGG | 0.534398 | 1.3:+43580819 | None:intergenic |
| CACCTCTTCCCTCATGCTGG+TGG | 0.541190 | 1.3:-43578700 | MS.gene81736:CDS |
| CAAATCCAATATTCAAGTCA+CGG | 0.545788 | 1.3:+43578890 | None:intergenic |
| GAGCAACACGAAGCGCCCAT+TGG | 0.547807 | 1.3:+43580741 | None:intergenic |
| CCAAGAATCAAACTAAGAGA+TGG | 0.548477 | 1.3:-43581579 | MS.gene81736:CDS |
| ATTGTATCCTTTGATAGACC+TGG | 0.548650 | 1.3:-43581311 | MS.gene81736:CDS |
| GCTGTTATAGGTGGTCCATC+CGG | 0.550946 | 1.3:+43581603 | None:intergenic |
| ACTAGCAGTGTTGTTTATTG+GGG | 0.551271 | 1.3:-43581682 | MS.gene81736:CDS |
| CCCCAGTCGTCAACTTCTGG+TGG | 0.560902 | 1.3:-43580820 | MS.gene81736:CDS |
| CACCACCAGCATGAGGGAAG+AGG | 0.561504 | 1.3:+43578698 | None:intergenic |
| GGTTCTGTTCATCTTTGGCA+AGG | 0.561565 | 1.3:-43578814 | MS.gene81736:CDS |
| AATGGAAATTACATGACCAA+TGG | 0.565003 | 1.3:-43580757 | MS.gene81736:CDS |
| TTGCTGATCAATTGGAATTG+GGG | 0.565301 | 1.3:-43581223 | MS.gene81736:CDS |
| CCAAACAATTTGCCCACCCA+GGG | 0.568846 | 1.3:+43581175 | None:intergenic |
| GTCATTGGTACTTCCCTGGG+TGG | 0.570691 | 1.3:-43581188 | MS.gene81736:CDS |
| CAGCTCGTTCTCACACCAGA+AGG | 0.572309 | 1.3:-43583928 | MS.gene81736:CDS |
| AAAATATGTGGCTCTCCGGA+TGG | 0.573796 | 1.3:-43581618 | MS.gene81736:CDS |
| ACATCGCGCAAAACCTTCCG+TGG | 0.574053 | 1.3:-43578753 | MS.gene81736:CDS |
| ATTCTTGGTGCTGTTATAGG+TGG | 0.577130 | 1.3:+43581594 | None:intergenic |
| CGGCCGAAGCCTATTCCCAA+TGG | 0.581823 | 1.3:-43580775 | MS.gene81736:CDS |
| TCATTGGTACTTCCCTGGGT+GGG | 0.582598 | 1.3:-43581187 | MS.gene81736:CDS |
| CAATATTCAAGTCACGGTGG+AGG | 0.590667 | 1.3:+43578896 | None:intergenic |
| GCCTTAAGCACATACCTCAC+AGG | 0.591137 | 1.3:-43581148 | MS.gene81736:intron |
| GTATTCACAACAATGGCCAC+TGG | 0.592880 | 1.3:-43583977 | None:intergenic |
| ACTGGTGGAACACTCAAAGA+TGG | 0.597899 | 1.3:-43580697 | MS.gene81736:CDS |
| TGAAGGAAGCTGAAAAGAAG+AGG | 0.598121 | 1.3:+43583895 | None:intergenic |
| TTCCACCAGTATGTTAGCCA+TGG | 0.599195 | 1.3:+43580710 | None:intergenic |
| TCCATAACCAGGTCTATCAA+AGG | 0.608223 | 1.3:+43581304 | None:intergenic |
| CACCAGCATGAGGGAAGAGG+TGG | 0.608346 | 1.3:+43578701 | None:intergenic |
| CCGGAGCAGGTAAGACAACA+AGG | 0.611530 | 1.3:-43578931 | MS.gene81736:intron |
| CGCCATGGCTAACATACTGG+TGG | 0.613077 | 1.3:-43580712 | MS.gene81736:CDS |
| CATGGTAGTGAACCCACGGA+AGG | 0.617397 | 1.3:+43578740 | None:intergenic |
| AATTACGGGTGATAGGGTGT+TGG | 0.623286 | 1.3:+43581452 | None:intergenic |
| TCACTCACACCACCAGCATG+AGG | 0.623856 | 1.3:+43578691 | None:intergenic |
| GAATCAAACTAAGAGATGGA+AGG | 0.623906 | 1.3:-43581575 | MS.gene81736:CDS |
| GGATCACTTTCTCCATAACC+AGG | 0.628496 | 1.3:+43581293 | None:intergenic |
| CACTCACACCACCAGCATGA+GGG | 0.635948 | 1.3:+43578692 | None:intergenic |
| AGCTCGTTCTCACACCAGAA+GGG | 0.638872 | 1.3:-43583927 | MS.gene81736:CDS |
| AGTTCATGGTAGTGAACCCA+CGG | 0.642351 | 1.3:+43578736 | None:intergenic |
| GTGTTGCTCACTACACGCCA+TGG | 0.657333 | 1.3:-43580727 | MS.gene81736:CDS |
| GCTTGTGCAGGATGTTGTCA+AGG | 0.658123 | 1.3:-43581348 | MS.gene81736:intron |
| AACTCTAAATCGTACCTGTG+AGG | 0.660452 | 1.3:+43581134 | None:intergenic |
| CATCGCGCAAAACCTTCCGT+GGG | 0.671853 | 1.3:-43578752 | MS.gene81736:CDS |
| CATTTGGCATACAAAGAGCA+CGG | 0.672117 | 1.3:-43581552 | MS.gene81736:CDS |
| GGATGTTGTCAAGGAATTAG+GGG | 0.673580 | 1.3:-43581339 | MS.gene81736:CDS |
| CAGTTGCAGGCATGACGCTG+TGG | 0.675923 | 1.3:-43581478 | MS.gene81736:CDS |
| CCACCAGAAGTTGACGACTG+GGG | 0.688382 | 1.3:+43580820 | None:intergenic |
| GCACGGTGTTCCTAAAGACG+TGG | 0.698118 | 1.3:-43581535 | MS.gene81736:CDS |
| ATCCAATATTCAAGTCACGG+TGG | 0.730301 | 1.3:+43578893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTATAACTTTTTATG+TGG | - | chr1.3:43583665-43583684 | MS.gene81736:intron | 10.0% |
| !! | AAAAATAAACACATGTATAA+CGG | + | chr1.3:43582461-43582480 | None:intergenic | 15.0% |
| !! | AAATAATACACAGAATAATA+CGG | - | chr1.3:43582986-43583005 | MS.gene81736:intron | 15.0% |
| !! | AACATAATGAAAATACATAT+AGG | - | chr1.3:43578974-43578993 | MS.gene81736:intron | 15.0% |
| !! | AATGTAATATAGAAAATTAC+GGG | + | chr1.3:43581187-43581206 | None:intergenic | 15.0% |
| !! | ATAGAAATAGTTTATACATA+AGG | - | chr1.3:43582734-43582753 | MS.gene81736:intron | 15.0% |
| !! | GAATGTAATATAGAAAATTA+CGG | + | chr1.3:43581188-43581207 | None:intergenic | 15.0% |
| !! | TAAAACTAATTTACTATTAG+TGG | + | chr1.3:43583466-43583485 | None:intergenic | 15.0% |
| !!! | ACAATTTAAAACATAAAGTA+TGG | + | chr1.3:43580866-43580885 | None:intergenic | 15.0% |
| !!! | TAAAAGTTGATTTTGAATTT+TGG | - | chr1.3:43582355-43582374 | MS.gene81736:intron | 15.0% |
| !!! | TTTAGCTTTCAAAATTTAAT+GGG | - | chr1.3:43578805-43578824 | MS.gene81736:CDS | 15.0% |
| !!! | TTTTAGCTTTCAAAATTTAA+TGG | - | chr1.3:43578804-43578823 | MS.gene81736:CDS | 15.0% |
| !! | AACTACAAATAAGCTAAATA+AGG | + | chr1.3:43581723-43581742 | None:intergenic | 20.0% |
| !! | AATATCAATGTCATTGAAAA+GGG | - | chr1.3:43579562-43579581 | MS.gene81736:intron | 20.0% |
| !! | ACTTTATATTATATACATGC+TGG | - | chr1.3:43578997-43579016 | MS.gene81736:intron | 20.0% |
| !! | AGATAATAAAGAGAATTATG+TGG | - | chr1.3:43582227-43582246 | MS.gene81736:intron | 20.0% |
| !! | GTTTGTAATGCAAAATTAAA+AGG | + | chr1.3:43580898-43580917 | None:intergenic | 20.0% |
| !! | TAATATCAATGTCATTGAAA+AGG | - | chr1.3:43579561-43579580 | MS.gene81736:intron | 20.0% |
| !! | TTGTATCTTAAAATTCTTTC+CGG | + | chr1.3:43579734-43579753 | None:intergenic | 20.0% |
| !!! | ATAATATGTCTTGTTTCAAT+TGG | - | chr1.3:43583616-43583635 | MS.gene81736:intron | 20.0% |
| !!! | TCAATCTTTTAGATGATTAT+TGG | - | chr1.3:43583157-43583176 | MS.gene81736:intron | 20.0% |
| ! | AATAAGTGCTTATGCTATAA+GGG | - | chr1.3:43582761-43582780 | MS.gene81736:intron | 25.0% |
| ! | ACAAAAGTAGTATTCATGAA+TGG | - | chr1.3:43580397-43580416 | MS.gene81736:intron | 25.0% |
| ! | ACTTATTAGAGTTTATCTAC+TGG | - | chr1.3:43581522-43581541 | MS.gene81736:CDS | 25.0% |
| ! | AGCAATACATAAAGTGATTT+AGG | - | chr1.3:43582299-43582318 | MS.gene81736:intron | 25.0% |
| ! | AGGGAAAATTGATAAATACA+AGG | + | chr1.3:43583301-43583320 | None:intergenic | 25.0% |
| ! | AGTTGCTTAAATCATTGTAT+AGG | + | chr1.3:43579944-43579963 | None:intergenic | 25.0% |
| ! | CAGGTTACAAGAAAAAAATT+AGG | - | chr1.3:43578854-43578873 | MS.gene81736:CDS | 25.0% |
| ! | CAGTAATCACACTAATAATT+GGG | + | chr1.3:43581953-43581972 | None:intergenic | 25.0% |
| ! | CTAAGAAATCGAGAATAATA+AGG | + | chr1.3:43582805-43582824 | None:intergenic | 25.0% |
| ! | CTTATTATTCTCGATTTCTT+AGG | - | chr1.3:43582803-43582822 | MS.gene81736:intron | 25.0% |
| ! | GAATATTGGATTTGGAAAAT+GGG | - | chr1.3:43583741-43583760 | MS.gene81736:intron | 25.0% |
| ! | GATATTCACATAAACAATCA+CGG | + | chr1.3:43582381-43582400 | None:intergenic | 25.0% |
| ! | GGATATTTCAAATGAAGATT+TGG | + | chr1.3:43580756-43580775 | None:intergenic | 25.0% |
| ! | TAACAACTTTCTAAATAAGC+TGG | + | chr1.3:43583217-43583236 | None:intergenic | 25.0% |
| ! | TAATAAGTGCTTATGCTATA+AGG | - | chr1.3:43582760-43582779 | MS.gene81736:intron | 25.0% |
| ! | TAATTGTAATCTGTCTATTC+TGG | + | chr1.3:43580236-43580255 | None:intergenic | 25.0% |
| ! | TATTACAAATGTAATCCTGA+AGG | - | chr1.3:43580431-43580450 | MS.gene81736:intron | 25.0% |
| ! | TATTATGCTCAATTGAATTG+AGG | + | chr1.3:43583547-43583566 | None:intergenic | 25.0% |
| ! | TCAAGACTAAAAACAATTGT+TGG | + | chr1.3:43580777-43580796 | None:intergenic | 25.0% |
| ! | TCTAACTTCTAAGTAATTAG+CGG | - | chr1.3:43580316-43580335 | MS.gene81736:intron | 25.0% |
| ! | TCTGTATTCATATATTATCC+TGG | + | chr1.3:43582675-43582694 | None:intergenic | 25.0% |
| ! | TGAATATAGAATGATGAAGA+TGG | - | chr1.3:43578878-43578897 | MS.gene81736:CDS | 25.0% |
| ! | TGAATATTGGATTTGGAAAA+TGG | - | chr1.3:43583740-43583759 | MS.gene81736:intron | 25.0% |
| ! | TGATTGTTTATGTGAATATC+AGG | - | chr1.3:43582381-43582400 | MS.gene81736:intron | 25.0% |
| ! | TGTATCTTAAAATTCTTTCC+GGG | + | chr1.3:43579733-43579752 | None:intergenic | 25.0% |
| ! | TTCATGAATGACTTCAAAAA+CGG | + | chr1.3:43582512-43582531 | None:intergenic | 25.0% |
| !! | ATCATCTAAAAGATTGATTC+AGG | + | chr1.3:43583154-43583173 | None:intergenic | 25.0% |
| !! | ATTGACTTTGCTATCATTAA+AGG | + | chr1.3:43580082-43580101 | None:intergenic | 25.0% |
| !! | TTGACTTTGCTATCATTAAA+GGG | + | chr1.3:43580081-43580100 | None:intergenic | 25.0% |
| !! | TTTCTTTAACACCTTTTCTT+AGG | + | chr1.3:43580134-43580153 | None:intergenic | 25.0% |
| !!! | ACTATCATTAAGTCACTTTT+AGG | - | chr1.3:43583955-43583974 | MS.gene81736:CDS | 25.0% |
| !!! | ATTTAGCTGATAGTTTTGAA+TGG | - | chr1.3:43582323-43582342 | MS.gene81736:intron | 25.0% |
| !!! | TGTTTTGATATAAGCTATCT+TGG | + | chr1.3:43581638-43581657 | None:intergenic | 25.0% |
| AAAAGGAAGACAAAAACTGA+AGG | + | chr1.3:43580163-43580182 | None:intergenic | 30.0% | |
| AAAATGGGAATATACTCCTT+TGG | - | chr1.3:43583756-43583775 | MS.gene81736:intron | 30.0% | |
| AAAGGAAGACAAAAACTGAA+GGG | + | chr1.3:43580162-43580181 | None:intergenic | 30.0% | |
| AAGTATCAATCTTCAACTTG+TGG | + | chr1.3:43579100-43579119 | None:intergenic | 30.0% | |
| AATCCATTTCCAAACAATGA+AGG | - | chr1.3:43583787-43583806 | MS.gene81736:intron | 30.0% | |
| AATGGAAATTACATGACCAA+TGG | - | chr1.3:43581865-43581884 | MS.gene81736:intron | 30.0% | |
| AATTCTTCTCTAGATCTACA+CGG | + | chr1.3:43579435-43579454 | None:intergenic | 30.0% | |
| ACGGTTATAGTAATTCCAAT+TGG | + | chr1.3:43579416-43579435 | None:intergenic | 30.0% | |
| ACTAAGTCGACAGATAAAAA+AGG | - | chr1.3:43582014-43582033 | MS.gene81736:intron | 30.0% | |
| AGTACCAATGACATAGAATT+TGG | + | chr1.3:43581426-43581445 | None:intergenic | 30.0% | |
| AGTATCAATCTTCAACTTGT+GGG | + | chr1.3:43579099-43579118 | None:intergenic | 30.0% | |
| ATAACGAGGTAATCAATCTT+CGG | - | chr1.3:43583100-43583119 | MS.gene81736:intron | 30.0% | |
| ATAGAAAATTACGGGTGATA+GGG | + | chr1.3:43581179-43581198 | None:intergenic | 30.0% | |
| ATCATTGTATAGGCTAATAC+AGG | + | chr1.3:43579934-43579953 | None:intergenic | 30.0% | |
| ATGCTCTTTAATGTACGATT+TGG | + | chr1.3:43581359-43581378 | None:intergenic | 30.0% | |
| ATGGAAATTACATGACCAAT+GGG | - | chr1.3:43581866-43581885 | MS.gene81736:intron | 30.0% | |
| ATGTAATTTCCATTGGGAAT+AGG | + | chr1.3:43581859-43581878 | None:intergenic | 30.0% | |
| ATTGGTCATGTAATTTCCAT+TGG | + | chr1.3:43581866-43581885 | None:intergenic | 30.0% | |
| CAAATCCAATATTCAAGTCA+CGG | + | chr1.3:43583735-43583754 | None:intergenic | 30.0% | |
| CATAAAATCATCTATGTCCA+TGG | - | chr1.3:43581115-43581134 | MS.gene81736:intron | 30.0% | |
| CCAATTATTAGTGTGATTAC+TGG | - | chr1.3:43581951-43581970 | MS.gene81736:intron | 30.0% | |
| CCAGTAATCACACTAATAAT+TGG | + | chr1.3:43581954-43581973 | None:intergenic | 30.0% | |
| CGGTTATAGTAATTCCAATT+GGG | + | chr1.3:43579415-43579434 | None:intergenic | 30.0% | |
| CTAAGTCGACAGATAAAAAA+GGG | - | chr1.3:43582015-43582034 | MS.gene81736:intron | 30.0% | |
| CTTGTTTATCAATCAAAGCT+TGG | - | chr1.3:43579117-43579136 | MS.gene81736:intron | 30.0% | |
| GAAAGAGTTAATGAAACTTG+GGG | - | chr1.3:43579980-43579999 | MS.gene81736:intron | 30.0% | |
| GAGCAAATAATTAAAAGCCT+TGG | + | chr1.3:43580263-43580282 | None:intergenic | 30.0% | |
| GGAAAGAGTTAATGAAACTT+GGG | - | chr1.3:43579979-43579998 | MS.gene81736:intron | 30.0% | |
| GTTTGTGGCATATATTCTAT+TGG | - | chr1.3:43582428-43582447 | MS.gene81736:intron | 30.0% | |
| TAGTTGTATTCGGAAATTGA+AGG | - | chr1.3:43580483-43580502 | MS.gene81736:intron | 30.0% | |
| TATAGAAAATTACGGGTGAT+AGG | + | chr1.3:43581180-43581199 | None:intergenic | 30.0% | |
| TATAGTAATTCCAATTGGGT+AGG | + | chr1.3:43579411-43579430 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | + | chr1.3:43582554-43582573 | None:intergenic | 30.0% | |
| TGCAGAATGATATGTAATCA+AGG | - | chr1.3:43579332-43579351 | MS.gene81736:intron | 30.0% | |
| TTGGTCATGTAATTTCCATT+GGG | + | chr1.3:43581865-43581884 | None:intergenic | 30.0% | |
| TTTCCTTCATTGTGAGTTAA+AGG | + | chr1.3:43580026-43580045 | None:intergenic | 30.0% | |
| ! | AAAACCACAATAGTTTGTCT+TGG | - | chr1.3:43582945-43582964 | MS.gene81736:intron | 30.0% |
| ! | AAGATTGATTCAGGCAAAAT+TGG | + | chr1.3:43583145-43583164 | None:intergenic | 30.0% |
| ! | ATAACTTTTTATGTGGCTTC+CGG | - | chr1.3:43583672-43583691 | MS.gene81736:intron | 30.0% |
| ! | ATTTTGCATTACAAACTCTC+AGG | - | chr1.3:43580902-43580921 | MS.gene81736:intron | 30.0% |
| ! | CAGATTACAATTAGTTTCCA+AGG | - | chr1.3:43580243-43580262 | MS.gene81736:intron | 30.0% |
| ! | CTTTAATGTACGATTTGGAT+CGG | + | chr1.3:43581354-43581373 | None:intergenic | 30.0% |
| ! | CTTTTAGATGATCGCAAAAT+TGG | - | chr1.3:43582261-43582280 | MS.gene81736:intron | 30.0% |
| ! | TTATGCCAAGAAGTTTTTCA+AGG | + | chr1.3:43583084-43583103 | None:intergenic | 30.0% |
| ! | TTTAATGTACGATTTGGATC+GGG | + | chr1.3:43581353-43581372 | None:intergenic | 30.0% |
| !! | AATGGATTTTGAAGATCCAA+AGG | + | chr1.3:43583775-43583794 | None:intergenic | 30.0% |
| !! | CATTTTAGCAACCTAAGAAA+AGG | - | chr1.3:43580120-43580139 | MS.gene81736:intron | 30.0% |
| !! | CTTTTCTTAGGTTGCTAAAA+TGG | + | chr1.3:43580122-43580141 | None:intergenic | 30.0% |
| !!! | AAGTTTTTCAAGGAACCATA+AGG | + | chr1.3:43583074-43583093 | None:intergenic | 30.0% |
| !!! | AGTTTTTCAAGGAACCATAA+GGG | + | chr1.3:43583073-43583092 | None:intergenic | 30.0% |
| !!! | CAAACTTTTTCAATACTGAC+AGG | - | chr1.3:43581757-43581776 | MS.gene81736:intron | 30.0% |
| AAAAACTTCTTGGCATAACG+AGG | - | chr1.3:43583086-43583105 | MS.gene81736:intron | 35.0% | |
| AAACTAGCTATAAACCTCAC+AGG | + | chr1.3:43580827-43580846 | None:intergenic | 35.0% | |
| AACAAGACTCCGATAACTAT+AGG | - | chr1.3:43580717-43580736 | MS.gene81736:CDS | 35.0% | |
| ACATTTACTTAACGACCACT+AGG | + | chr1.3:43579542-43579561 | None:intergenic | 35.0% | |
| ACTCTGAGTCAATAAACTTC+AGG | + | chr1.3:43583343-43583362 | None:intergenic | 35.0% | |
| AGATGGATAGGATAAAGAAG+TGG | - | chr1.3:43580512-43580531 | MS.gene81736:intron | 35.0% | |
| AGCAAGCTCTTCTATATCTA+AGG | + | chr1.3:43581384-43581403 | None:intergenic | 35.0% | |
| AGGATGTTGTCAAGGAATTA+GGG | - | chr1.3:43581282-43581301 | MS.gene81736:CDS | 35.0% | |
| ATAAAAACTTGCGAGACTGT+TGG | - | chr1.3:43581546-43581565 | MS.gene81736:CDS | 35.0% | |
| ATAGGATAAAGAAGTGGAGT+GGG | - | chr1.3:43580518-43580537 | MS.gene81736:intron | 35.0% | |
| ATATTATCCTGGAGAGCTTA+TGG | + | chr1.3:43582664-43582683 | None:intergenic | 35.0% | |
| ATCAAAGCTTGGAAATGAGA+TGG | - | chr1.3:43579128-43579147 | MS.gene81736:intron | 35.0% | |
| ATGAACAACTTTCACTGCTT+AGG | - | chr1.3:43582527-43582546 | MS.gene81736:intron | 35.0% | |
| ATGAAGGTTCTGTTCATCTT+TGG | - | chr1.3:43583803-43583822 | MS.gene81736:intron | 35.0% | |
| ATTGTATCCTTTGATAGACC+TGG | - | chr1.3:43581311-43581330 | MS.gene81736:CDS | 35.0% | |
| CAACTTTCTAAATAAGCTGG+AGG | + | chr1.3:43583214-43583233 | None:intergenic | 35.0% | |
| CCAAGAATCAAACTAAGAGA+TGG | - | chr1.3:43581043-43581062 | MS.gene81736:intron | 35.0% | |
| CGTGACTTGAATATTGGATT+TGG | - | chr1.3:43583733-43583752 | MS.gene81736:intron | 35.0% | |
| CTAACCAAGACAAACTATTG+TGG | + | chr1.3:43582952-43582971 | None:intergenic | 35.0% | |
| CTCACTTTACTTTCTGTCTT+GGG | + | chr1.3:43579656-43579675 | None:intergenic | 35.0% | |
| CTGAAAAGAAGAGGATTTGT+TGG | + | chr1.3:43578721-43578740 | None:intergenic | 35.0% | |
| CTGCAACATCAATTACCAAA+AGG | + | chr1.3:43583366-43583385 | None:intergenic | 35.0% | |
| CTGTACTAGTTCAGTTAGTT+AGG | - | chr1.3:43579027-43579046 | MS.gene81736:intron | 35.0% | |
| CTTGCTGATCAATTGGAATT+GGG | - | chr1.3:43581398-43581417 | MS.gene81736:intron | 35.0% | |
| GAAAGACGTCCTATAGTTAT+CGG | + | chr1.3:43580729-43580748 | None:intergenic | 35.0% | |
| GAACCTTCATTGTTTGGAAA+TGG | + | chr1.3:43583793-43583812 | None:intergenic | 35.0% | |
| GAATCAAACTAAGAGATGGA+AGG | - | chr1.3:43581047-43581066 | MS.gene81736:intron | 35.0% | |
| GAATCTGATAATCTGAGAAG+TGG | - | chr1.3:43583489-43583508 | MS.gene81736:intron | 35.0% | |
| GACTTATTTGAGCTTGTCTA+CGG | - | chr1.3:43582563-43582582 | MS.gene81736:intron | 35.0% | |
| GCAAGGAGATGAAGATATTA+TGG | - | chr1.3:43583825-43583844 | MS.gene81736:intron | 35.0% | |
| GCAGTGTTGTATTTAGCTAA+TGG | - | chr1.3:43579676-43579695 | MS.gene81736:intron | 35.0% | |
| GGGAAAGAGTTAATGAAACT+TGG | - | chr1.3:43579978-43579997 | MS.gene81736:intron | 35.0% | |
| GTATCAATCTTCAACTTGTG+GGG | + | chr1.3:43579098-43579117 | None:intergenic | 35.0% | |
| GTTAAAGGAGGATGTTTACA+TGG | + | chr1.3:43580011-43580030 | None:intergenic | 35.0% | |
| GTTTATTGGGGTTATAGCAT+GGG | - | chr1.3:43580952-43580971 | MS.gene81736:intron | 35.0% | |
| TAAAAACTTGCGAGACTGTT+GGG | - | chr1.3:43581547-43581566 | MS.gene81736:CDS | 35.0% | |
| TACAAATGTAATCCTGAAGG+TGG | - | chr1.3:43580434-43580453 | MS.gene81736:intron | 35.0% | |
| TATCAATCTTCAACTTGTGG+GGG | + | chr1.3:43579097-43579116 | None:intergenic | 35.0% | |
| TATTTAATGTGAGCTTGTGC+AGG | - | chr1.3:43581262-43581281 | MS.gene81736:CDS | 35.0% | |
| TCAAAAACGGAAGACATTGT+AGG | + | chr1.3:43582499-43582518 | None:intergenic | 35.0% | |
| TCTAGAGACTAGAAACTAAC+AGG | - | chr1.3:43580687-43580706 | MS.gene81736:CDS | 35.0% | |
| TCTATTCTGGACAAACTTGT+TGG | + | chr1.3:43580223-43580242 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1.3:43582115-43582134 | None:intergenic | 35.0% | |
| TGAACAGAACCTTCATTGTT+TGG | + | chr1.3:43583799-43583818 | None:intergenic | 35.0% | |
| TGATCTTCCTGCAAACTTAA+CGG | - | chr1.3:43581827-43581846 | MS.gene81736:intron | 35.0% | |
| TGGTAAGCTCAAATGTTAGA+TGG | - | chr1.3:43579881-43579900 | MS.gene81736:intron | 35.0% | |
| TGGTTCCTTGAAAAACTTCT+TGG | - | chr1.3:43583076-43583095 | MS.gene81736:intron | 35.0% | |
| TGTATGGGAAAATCTTCTCA+TGG | - | chr1.3:43580653-43580672 | MS.gene81736:CDS | 35.0% | |
| TGTTTATTGGGGTTATAGCA+TGG | - | chr1.3:43580951-43580970 | MS.gene81736:intron | 35.0% | |
| TTACTTAGAAGTTAGAAGCC+AGG | + | chr1.3:43580312-43580331 | None:intergenic | 35.0% | |
| TTAGCTAATGGAATGCCTTT+AGG | - | chr1.3:43579688-43579707 | MS.gene81736:intron | 35.0% | |
| TTCATTTGCACCACAATGAT+GGG | + | chr1.3:43579589-43579608 | None:intergenic | 35.0% | |
| TTGCTAAAATGGCTACTATG+AGG | + | chr1.3:43580111-43580130 | None:intergenic | 35.0% | |
| TTGCTGATCAATTGGAATTG+GGG | - | chr1.3:43581399-43581418 | MS.gene81736:intron | 35.0% | |
| TTGTGGTGCAAATGAAAACT+AGG | - | chr1.3:43579593-43579612 | MS.gene81736:intron | 35.0% | |
| TTTCATTTGCACCACAATGA+TGG | + | chr1.3:43579590-43579609 | None:intergenic | 35.0% | |
| TTTGGTGAAGATCGGATATT+TGG | - | chr1.3:43579174-43579193 | MS.gene81736:intron | 35.0% | |
| ! | AATTTTTCTGCTAACTCCAG+TGG | + | chr1.3:43578664-43578683 | None:intergenic | 35.0% |
| ! | ACTTTGCTATCATTAAAGGG+CGG | + | chr1.3:43580078-43580097 | None:intergenic | 35.0% |
| ! | CCATCTCTTAGTTTGATTCT+TGG | + | chr1.3:43581046-43581065 | None:intergenic | 35.0% |
| ! | GAGGCTAATCTGAAATTTGA+AGG | + | chr1.3:43583528-43583547 | None:intergenic | 35.0% |
| !! | ACACTAGCAGTGTTGTTTAT+TGG | - | chr1.3:43580938-43580957 | MS.gene81736:intron | 35.0% |
| !! | ACTAGCAGTGTTGTTTATTG+GGG | - | chr1.3:43580940-43580959 | MS.gene81736:intron | 35.0% |
| !! | ATCTGTCGACTTAGTTAAGA+GGG | + | chr1.3:43582211-43582230 | None:intergenic | 35.0% |
| !! | CACTAGCAGTGTTGTTTATT+GGG | - | chr1.3:43580939-43580958 | MS.gene81736:intron | 35.0% |
| !! | CTAAGTAATTAGCGGATTCA+CGG | - | chr1.3:43580324-43580343 | MS.gene81736:intron | 35.0% |
| !! | GTGTTGTAGCTTTAGAATTC+AGG | - | chr1.3:43578835-43578854 | MS.gene81736:CDS | 35.0% |
| !! | TATCTGTCGACTTAGTTAAG+AGG | + | chr1.3:43582212-43582231 | None:intergenic | 35.0% |
| !! | TTGATTCTTGGTGCTGTTAT+AGG | + | chr1.3:43581034-43581053 | None:intergenic | 35.0% |
| !!! | AGGTGGCAATATTTTTAGTG+TGG | - | chr1.3:43579370-43579389 | MS.gene81736:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1.3:43582114-43582133 | MS.gene81736:intron | 35.0% |
| !!! | TTATTGACTCAGAGTCCTTT+TGG | - | chr1.3:43583348-43583367 | MS.gene81736:intron | 35.0% |
| AAAAACTTGCGAGACTGTTG+GGG | - | chr1.3:43581548-43581567 | MS.gene81736:CDS | 40.0% | |
| AAACTTCAGGCAGTTATCCA+TGG | + | chr1.3:43583330-43583349 | None:intergenic | 40.0% | |
| AAATGTAATCCTGAAGGTGG+TGG | - | chr1.3:43580437-43580456 | MS.gene81736:intron | 40.0% | |
| AACCCAACATGAATACTTCC+TGG | - | chr1.3:43580291-43580310 | MS.gene81736:intron | 40.0% | |
| AACTCTAAATCGTACCTGTG+AGG | + | chr1.3:43581491-43581510 | None:intergenic | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | + | chr1.3:43581627-43581646 | None:intergenic | 40.0% | |
| AATATTGCCACCTCTTTCCT+AGG | + | chr1.3:43579363-43579382 | None:intergenic | 40.0% | |
| ACAGATAAAAAAGGGCAACC+CGG | - | chr1.3:43582023-43582042 | MS.gene81736:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1.3:43582121-43582140 | None:intergenic | 40.0% | |
| AGAGCACATCACTACTAGAA+AGG | + | chr1.3:43579490-43579509 | None:intergenic | 40.0% | |
| AGATGTGCTTTGGTGAAGAT+CGG | - | chr1.3:43579166-43579185 | MS.gene81736:intron | 40.0% | |
| AGCACTTGTGAGACTGTTTA+TGG | - | chr1.3:43582596-43582615 | MS.gene81736:intron | 40.0% | |
| AGCCTTGAAATGACACACAT+AGG | - | chr1.3:43579516-43579535 | MS.gene81736:intron | 40.0% | |
| AGCTCAAATGTTAGATGGAC+AGG | - | chr1.3:43579886-43579905 | MS.gene81736:intron | 40.0% | |
| AGCTGCACAAATTCAGTTTG+TGG | - | chr1.3:43582413-43582432 | MS.gene81736:intron | 40.0% | |
| AGTATCCTTGACAACAGCTT+TGG | + | chr1.3:43579769-43579788 | None:intergenic | 40.0% | |
| AGTCTTGAATTAGTCCCTGT+TGG | - | chr1.3:43580789-43580808 | MS.gene81736:CDS | 40.0% | |
| AGTTAATGAAACTTGGGGCA+TGG | - | chr1.3:43579985-43580004 | MS.gene81736:intron | 40.0% | |
| ATATTGCCACCTCTTTCCTA+GGG | + | chr1.3:43579362-43579381 | None:intergenic | 40.0% | |
| ATCCAATATTCAAGTCACGG+TGG | + | chr1.3:43583732-43583751 | None:intergenic | 40.0% | |
| ATGTAATCAAGGAATCCCCT+AGG | - | chr1.3:43579343-43579362 | MS.gene81736:intron | 40.0% | |
| ATGTATCGTTGTAGTGTGAC+AGG | + | chr1.3:43583853-43583872 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1.3:43582120-43582139 | None:intergenic | 40.0% | |
| CAGGATGTTGTCAAGGAATT+AGG | - | chr1.3:43581281-43581300 | MS.gene81736:CDS | 40.0% | |
| CATTAACTCTTTCCCTGACA+GGG | + | chr1.3:43579973-43579992 | None:intergenic | 40.0% | |
| CATTTGGCATACAAAGAGCA+CGG | - | chr1.3:43581070-43581089 | MS.gene81736:intron | 40.0% | |
| CCAAGACAGAAAGTAAAGTG+AGG | - | chr1.3:43579654-43579673 | MS.gene81736:intron | 40.0% | |
| CCTCACTTTACTTTCTGTCT+TGG | + | chr1.3:43579657-43579676 | None:intergenic | 40.0% | |
| CCTCCTTTAACTCACAATGA+AGG | - | chr1.3:43580020-43580039 | MS.gene81736:intron | 40.0% | |
| CCTTCATTGTGAGTTAAAGG+AGG | + | chr1.3:43580023-43580042 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1.3:43582089-43582108 | None:intergenic | 40.0% | |
| CTCATGCTTTGTAATCATGC+TGG | - | chr1.3:43582917-43582936 | MS.gene81736:intron | 40.0% | |
| CTTTATCCTATCCATCTTCC+TGG | + | chr1.3:43580509-43580528 | None:intergenic | 40.0% | |
| GATAGGATAAAGAAGTGGAG+TGG | - | chr1.3:43580517-43580536 | MS.gene81736:intron | 40.0% | |
| GCACATTCAACAATGAAACG+TGG | + | chr1.3:43580056-43580075 | None:intergenic | 40.0% | |
| GCATGATCATGTCTTCTAGA+TGG | - | chr1.3:43583041-43583060 | MS.gene81736:intron | 40.0% | |
| GGATGTTGTCAAGGAATTAG+GGG | - | chr1.3:43581283-43581302 | MS.gene81736:CDS | 40.0% | |
| GGGTCCAAATTCTATGTCAT+TGG | - | chr1.3:43581419-43581438 | MS.gene81736:intron | 40.0% | |
| GTAGGAGTAAGTTGTGATGT+TGG | - | chr1.3:43579861-43579880 | MS.gene81736:intron | 40.0% | |
| GTTAAGTTTGCAGGAAGATC+AGG | + | chr1.3:43581828-43581847 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr1.3:43582165-43582184 | None:intergenic | 40.0% | |
| TATGTCATTGGTACTTCCCT+GGG | - | chr1.3:43581431-43581450 | MS.gene81736:intron | 40.0% | |
| TCACTACTAGAAAGGTTTGC+TGG | + | chr1.3:43579482-43579501 | None:intergenic | 40.0% | |
| TCATTAACTCTTTCCCTGAC+AGG | + | chr1.3:43579974-43579993 | None:intergenic | 40.0% | |
| TCATTTGCACCACAATGATG+GGG | + | chr1.3:43579588-43579607 | None:intergenic | 40.0% | |
| TCCAAAAATATGTGGCTCTC+CGG | - | chr1.3:43581000-43581019 | MS.gene81736:intron | 40.0% | |
| TCCATAACCAGGTCTATCAA+AGG | + | chr1.3:43581321-43581340 | None:intergenic | 40.0% | |
| TCCTTTGATAGACCTGGTTA+TGG | - | chr1.3:43581317-43581336 | MS.gene81736:CDS | 40.0% | |
| TGAAGGAAGCTGAAAAGAAG+AGG | + | chr1.3:43578730-43578749 | None:intergenic | 40.0% | |
| TGATCATGTCTTCTAGATGG+AGG | - | chr1.3:43583044-43583063 | MS.gene81736:intron | 40.0% | |
| TGCGAGTGTCTAGTTGTATT+CGG | - | chr1.3:43580473-43580492 | MS.gene81736:intron | 40.0% | |
| TGGGAAAATCTTCTCATGGA+AGG | - | chr1.3:43580657-43580676 | MS.gene81736:CDS | 40.0% | |
| TGTCAAGGATACTCTTGATC+CGG | - | chr1.3:43579776-43579795 | MS.gene81736:intron | 40.0% | |
| TTAGTTAAGAGGGGTAACCT+TGG | + | chr1.3:43582201-43582220 | None:intergenic | 40.0% | |
| TTATGCCAAAGCTGTTGTCA+AGG | - | chr1.3:43579761-43579780 | MS.gene81736:intron | 40.0% | |
| TTATGCTTTGCCACGTCTTT+AGG | + | chr1.3:43581100-43581119 | None:intergenic | 40.0% | |
| TTTCCAACCATTCGGGTAAA+GGG | + | chr1.3:43583191-43583210 | None:intergenic | 40.0% | |
| TTTCCATTGGGAATAGGCTT+CGG | + | chr1.3:43581853-43581872 | None:intergenic | 40.0% | |
| ! | GAAGTATTCATGTTGGGTTG+AGG | + | chr1.3:43580290-43580309 | None:intergenic | 40.0% |
| ! | GCTTGCTGATCAATTGGAAT+TGG | - | chr1.3:43581397-43581416 | MS.gene81736:intron | 40.0% |
| ! | TCTTCTTTTCAGCTTCCTTC+AGG | - | chr1.3:43578729-43578748 | MS.gene81736:CDS | 40.0% |
| ! | TCTTGTTTCGAAAGGATGTC+TGG | + | chr1.3:43581981-43582000 | None:intergenic | 40.0% |
| !! | AAGCCAGGAAGTATTCATGT+TGG | + | chr1.3:43580297-43580316 | None:intergenic | 40.0% |
| !! | ACTAAGAGATGGAAGGCATT+TGG | - | chr1.3:43581054-43581073 | MS.gene81736:intron | 40.0% |
| !! | AGAAGAGCTTGCTGATCAAT+TGG | - | chr1.3:43581391-43581410 | MS.gene81736:intron | 40.0% |
| !! | AGCCAGGAAGTATTCATGTT+GGG | + | chr1.3:43580296-43580315 | None:intergenic | 40.0% |
| !! | ATTCTTGGTGCTGTTATAGG+TGG | + | chr1.3:43581031-43581050 | None:intergenic | 40.0% |
| !! | CTTGTTGGTGTCACTTCTAT+CGG | + | chr1.3:43580208-43580227 | None:intergenic | 40.0% |
| !! | GCTCTTTGTCTTGTTTCGAA+AGG | + | chr1.3:43581989-43582008 | None:intergenic | 40.0% |
| !! | TAGAAAGGTTTGCTGGTTCA+GGG | + | chr1.3:43579475-43579494 | None:intergenic | 40.0% |
| !! | TCTGTCGACTTAGTTAAGAG+GGG | + | chr1.3:43582210-43582229 | None:intergenic | 40.0% |
| !!! | ATTTTTAGTGTGGCGTGAGT+CGG | - | chr1.3:43579380-43579399 | MS.gene81736:intron | 40.0% |
| !!! | CTTTTTCAATACTGACAGGC+TGG | - | chr1.3:43581761-43581780 | MS.gene81736:intron | 40.0% |
| AAAATATGTGGCTCTCCGGA+TGG | - | chr1.3:43581004-43581023 | MS.gene81736:intron | 45.0% | |
| AAATGGCAGCCACGTAAATG+AGG | - | chr1.3:43579830-43579849 | MS.gene81736:intron | 45.0% | |
| AACCTCACAGGCTCATACTA+AGG | + | chr1.3:43580815-43580834 | None:intergenic | 45.0% | |
| AAGACATCCCTTTACCCGAA+TGG | - | chr1.3:43583181-43583200 | MS.gene81736:intron | 45.0% | |
| AAGTGGCTGAAGCTATTGCA+TGG | - | chr1.3:43579268-43579287 | MS.gene81736:intron | 45.0% | |
| AATGACACACATAGGCCTAG+TGG | - | chr1.3:43579524-43579543 | MS.gene81736:intron | 45.0% | |
| AATGGGTGTACGGAGTCAAA+AGG | + | chr1.3:43580180-43580199 | None:intergenic | 45.0% | |
| AATTACGGGTGATAGGGTGT+TGG | + | chr1.3:43581173-43581192 | None:intergenic | 45.0% | |
| ACCTGTGAGGTATGTGCTTA+AGG | + | chr1.3:43581478-43581497 | None:intergenic | 45.0% | |
| ACTGGTGGAACACTCAAAGA+TGG | - | chr1.3:43581925-43581944 | MS.gene81736:intron | 45.0% | |
| ATCATCTTTCCAAGCTCTCC+CGG | + | chr1.3:43579798-43579817 | None:intergenic | 45.0% | |
| ATGAGATGGAAGAAATGCCG+AGG | - | chr1.3:43579142-43579161 | MS.gene81736:intron | 45.0% | |
| ATGATCCACAGCCTGGAAAA+TGG | - | chr1.3:43579813-43579832 | MS.gene81736:intron | 45.0% | |
| CAATATTCAAGTCACGGTGG+AGG | + | chr1.3:43583729-43583748 | None:intergenic | 45.0% | |
| CAATCTTTCCTCTAGCCACA+CGG | + | chr1.3:43580375-43580394 | None:intergenic | 45.0% | |
| CACTTCTATCGGCCGTAAAT+GGG | + | chr1.3:43580197-43580216 | None:intergenic | 45.0% | |
| CTAGATGGAGGTTTCCCTTA+TGG | - | chr1.3:43583056-43583075 | MS.gene81736:intron | 45.0% | |
| CTATGTCATTGGTACTTCCC+TGG | - | chr1.3:43581430-43581449 | MS.gene81736:intron | 45.0% | |
| CTCCACCGTGACTTGAATAT+TGG | - | chr1.3:43583727-43583746 | MS.gene81736:intron | 45.0% | |
| GAAATTGAAGGCCAGGAAGA+TGG | - | chr1.3:43580495-43580514 | MS.gene81736:intron | 45.0% | |
| GAATAGCTAGGAACAGGTTC+AGG | - | chr1.3:43580542-43580561 | MS.gene81736:intron | 45.0% | |
| GACGTTCCTCAATCACCTAA+AGG | + | chr1.3:43579706-43579725 | None:intergenic | 45.0% | |
| GAGGTAATCAATCTTCGGAG+TGG | - | chr1.3:43583105-43583124 | MS.gene81736:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1.3:43582090-43582109 | None:intergenic | 45.0% | |
| GCTCCTCCTCCAAAAATATG+TGG | - | chr1.3:43580992-43581011 | MS.gene81736:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1.3:43582093-43582112 | None:intergenic | 45.0% | |
| GGAATGCCTTTAGGTGATTG+AGG | - | chr1.3:43579697-43579716 | MS.gene81736:intron | 45.0% | |
| GGATCACTTTCTCCATAACC+AGG | + | chr1.3:43581332-43581351 | None:intergenic | 45.0% | |
| GGTGGGAGAAGAATTGATGT+TGG | - | chr1.3:43580579-43580598 | MS.gene81736:intron | 45.0% | |
| GGTTCCATAGCAGTTGAAAC+CGG | - | chr1.3:43579614-43579633 | MS.gene81736:intron | 45.0% | |
| GGTTCTGTTCATCTTTGGCA+AGG | - | chr1.3:43583808-43583827 | MS.gene81736:intron | 45.0% | |
| GTAAATGAGGAGGGTTGTGT+AGG | - | chr1.3:43579843-43579862 | MS.gene81736:intron | 45.0% | |
| GTATTCGGAAATTGAAGGCC+AGG | - | chr1.3:43580488-43580507 | MS.gene81736:intron | 45.0% | |
| GTCAAGGATACTCTTGATCC+GGG | - | chr1.3:43579777-43579796 | MS.gene81736:intron | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr1.3:43582159-43582178 | None:intergenic | 45.0% | |
| GTTCACTACCATGAACTTCC+AGG | - | chr1.3:43583892-43583911 | MS.gene81736:intron | 45.0% | |
| GTTTCCAACCATTCGGGTAA+AGG | + | chr1.3:43583192-43583211 | None:intergenic | 45.0% | |
| TACCATGAACTTCCAGGTTC+TGG | - | chr1.3:43583898-43583917 | MS.gene81736:CDS | 45.0% | |
| TAGGTGATTGAGGAACGTCA+AGG | - | chr1.3:43579707-43579726 | MS.gene81736:intron | 45.0% | |
| TATTGCCACCTCTTTCCTAG+GGG | + | chr1.3:43579361-43579380 | None:intergenic | 45.0% | |
| TCACCAAAGCACATCTTCCT+CGG | + | chr1.3:43579162-43579181 | None:intergenic | 45.0% | |
| TCACTTCTATCGGCCGTAAA+TGG | + | chr1.3:43580198-43580217 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr1.3:43582158-43582177 | None:intergenic | 45.0% | |
| TGACTCCGTACACCCATTTA+CGG | - | chr1.3:43580182-43580201 | MS.gene81736:intron | 45.0% | |
| TTCACTGCTTAGGACCTGTT+TGG | - | chr1.3:43582537-43582556 | MS.gene81736:intron | 45.0% | |
| TTCCACCAGTATGTTAGCCA+TGG | + | chr1.3:43581915-43581934 | None:intergenic | 45.0% | |
| ! | AGTTCATGGTAGTGAACCCA+CGG | + | chr1.3:43583889-43583908 | None:intergenic | 45.0% |
| ! | ATCCTGAAGGTGGTGGTTTA+TGG | - | chr1.3:43580444-43580463 | MS.gene81736:intron | 45.0% |
| ! | ATGGGGGAGGATCTTTTGTA+TGG | - | chr1.3:43580637-43580656 | MS.gene81736:CDS | 45.0% |
| ! | CAAACCGGTTTCAACTGCTA+TGG | + | chr1.3:43579621-43579640 | None:intergenic | 45.0% |
| ! | CTTTTCAGCTTCCTTCAGGT+GGG | - | chr1.3:43578733-43578752 | MS.gene81736:CDS | 45.0% |
| ! | TCCGGAGAGCCACATATTTT+TGG | + | chr1.3:43581004-43581023 | None:intergenic | 45.0% |
| ! | TCCTGAAGGTGGTGGTTTAT+GGG | - | chr1.3:43580445-43580464 | MS.gene81736:intron | 45.0% |
| ! | TCTTTTCAGCTTCCTTCAGG+TGG | - | chr1.3:43578732-43578751 | MS.gene81736:CDS | 45.0% |
| ! | TGGGGGAGGATCTTTTGTAT+GGG | - | chr1.3:43580638-43580657 | MS.gene81736:CDS | 45.0% |
| ! | TGGTTCAGGGGGATTTTCTT+CGG | + | chr1.3:43579462-43579481 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1.3:43582125-43582144 | MS.gene81736:intron | 45.0% |
| !! | ACGGATAGCATCGATGGAAA+GGG | - | chr1.3:43580343-43580362 | MS.gene81736:intron | 45.0% |
| !! | AGAAAGGTTTGCTGGTTCAG+GGG | + | chr1.3:43579474-43579493 | None:intergenic | 45.0% |
| !! | AGAGCAATGCTGCTTTGACT+TGG | - | chr1.3:43583236-43583255 | MS.gene81736:intron | 45.0% |
| !! | CTAGAAAGGTTTGCTGGTTC+AGG | + | chr1.3:43579476-43579495 | None:intergenic | 45.0% |
| !! | CTGCTTTGACTTGGTTAGCT+CGG | - | chr1.3:43583245-43583264 | MS.gene81736:intron | 45.0% |
| !! | GGCCTATGTGTGTCATTTCA+AGG | + | chr1.3:43579521-43579540 | None:intergenic | 45.0% |
| !! | TTGAAACCGGTTTGCTGCAA+AGG | - | chr1.3:43579627-43579646 | MS.gene81736:intron | 45.0% |
| !!! | GAGCCACATATTTTTGGAGG+AGG | + | chr1.3:43580998-43581017 | None:intergenic | 45.0% |
| !!! | GGAGAGCCACATATTTTTGG+AGG | + | chr1.3:43581001-43581020 | None:intergenic | 45.0% |
| AAGAGCTAAGACCCACCTGA+AGG | + | chr1.3:43578747-43578766 | None:intergenic | 50.0% | |
| ACACGCCATGGCTAACATAC+TGG | - | chr1.3:43581907-43581926 | MS.gene81736:intron | 50.0% | |
| ACCCATAAACCACCACCTTC+AGG | + | chr1.3:43580449-43580468 | None:intergenic | 50.0% | |
| AGCAACTTGCAAACCCTGTC+AGG | - | chr1.3:43579957-43579976 | MS.gene81736:intron | 50.0% | |
| AGCTCGTTCTCACACCAGAA+GGG | - | chr1.3:43578695-43578714 | MS.gene81736:CDS | 50.0% | |
| AGGCTCATACTAAGGCCAAC+AGG | + | chr1.3:43580807-43580826 | None:intergenic | 50.0% | |
| AGTGGAGTGGGAGAATAGCT+AGG | - | chr1.3:43580530-43580549 | MS.gene81736:intron | 50.0% | |
| ATCGGCCGTAAATGGGTGTA+CGG | + | chr1.3:43580190-43580209 | None:intergenic | 50.0% | |
| ATGCCGAGGAAGATGTGCTT+TGG | - | chr1.3:43579156-43579175 | MS.gene81736:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr1.3:43582181-43582200 | MS.gene81736:intron | 50.0% | |
| CAAGGAATCCCCTAGGAAAG+AGG | - | chr1.3:43579350-43579369 | MS.gene81736:intron | 50.0% | |
| CACAACCCTCCTCATTTACG+TGG | + | chr1.3:43579842-43579861 | None:intergenic | 50.0% | |
| CAGCCACTGCAATTCACAAG+TGG | - | chr1.3:43579251-43579270 | MS.gene81736:intron | 50.0% | |
| CAGCCACTTGTGAATTGCAG+TGG | + | chr1.3:43579257-43579276 | None:intergenic | 50.0% | |
| CAGGCAGTTATCCATGGATG+CGG | + | chr1.3:43583324-43583343 | None:intergenic | 50.0% | |
| CAGTTATCCATGGATGCGGA+GGG | + | chr1.3:43583320-43583339 | None:intergenic | 50.0% | |
| CATCACCCAAAGCCAGTGTT+GGG | + | chr1.3:43580620-43580639 | None:intergenic | 50.0% | |
| CATCCCTTTACCCGAATGGT+TGG | - | chr1.3:43583185-43583204 | MS.gene81736:intron | 50.0% | |
| CCAAACAATTTGCCCACCCA+GGG | + | chr1.3:43581450-43581469 | None:intergenic | 50.0% | |
| CTGGAGGTTTCCAACCATTC+GGG | + | chr1.3:43583198-43583217 | None:intergenic | 50.0% | |
| GCAACTTGCAAACCCTGTCA+GGG | - | chr1.3:43579958-43579977 | MS.gene81736:intron | 50.0% | |
| GCCTTAAGCACATACCTCAC+AGG | - | chr1.3:43581474-43581493 | MS.gene81736:CDS | 50.0% | |
| GCTGGAGGTTTCCAACCATT+CGG | + | chr1.3:43583199-43583218 | None:intergenic | 50.0% | |
| GCTGTTATAGGTGGTCCATC+CGG | + | chr1.3:43581022-43581041 | None:intergenic | 50.0% | |
| GCTTGTGCAGGATGTTGTCA+AGG | - | chr1.3:43581274-43581293 | MS.gene81736:CDS | 50.0% | |
| GGCTCATACTAAGGCCAACA+GGG | + | chr1.3:43580806-43580825 | None:intergenic | 50.0% | |
| GTCGGAACAACCTACCCAAT+TGG | - | chr1.3:43579398-43579417 | MS.gene81736:intron | 50.0% | |
| GTGGGAGAATAGCTAGGAAC+AGG | - | chr1.3:43580536-43580555 | MS.gene81736:intron | 50.0% | |
| GTTCAGGTGGCTGGAAAGAA+CGG | - | chr1.3:43580558-43580577 | MS.gene81736:intron | 50.0% | |
| TAGCTAGGAACAGGTTCAGG+TGG | - | chr1.3:43580545-43580564 | MS.gene81736:intron | 50.0% | |
| TCATTGGTACTTCCCTGGGT+GGG | - | chr1.3:43581435-43581454 | MS.gene81736:intron | 50.0% | |
| TCCAAACAATTTGCCCACCC+AGG | + | chr1.3:43581451-43581470 | None:intergenic | 50.0% | |
| TCCATGGTTTCAGCAGTTGC+AGG | - | chr1.3:43581131-43581150 | MS.gene81736:intron | 50.0% | |
| TGAAAAGGGCCCCATCATTG+TGG | - | chr1.3:43579576-43579595 | MS.gene81736:intron | 50.0% | |
| TGAAGGCCAGGAAGATGGAT+AGG | - | chr1.3:43580500-43580519 | MS.gene81736:intron | 50.0% | |
| TGGAAAGATGATCCACAGCC+TGG | - | chr1.3:43579806-43579825 | MS.gene81736:intron | 50.0% | |
| TTCAATACTGACAGGCTGGC+AGG | - | chr1.3:43581765-43581784 | MS.gene81736:intron | 50.0% | |
| ! | AGAGTACCCAATCCCAACAC+TGG | - | chr1.3:43580605-43580624 | MS.gene81736:intron | 50.0% |
| ! | CAATTTTCCCTCCGCATCCA+TGG | - | chr1.3:43583310-43583329 | MS.gene81736:intron | 50.0% |
| ! | CCAAAGCCAGTGTTGGGATT+GGG | + | chr1.3:43580614-43580633 | None:intergenic | 50.0% |
| ! | CCTTGTTGTCTTACCTGCTC+CGG | + | chr1.3:43583694-43583713 | None:intergenic | 50.0% |
| ! | GGATTCACGGATAGCATCGA+TGG | - | chr1.3:43580337-43580356 | MS.gene81736:intron | 50.0% |
| ! | TCAGGGGGATTTTCTTCGGT+GGG | + | chr1.3:43579458-43579477 | None:intergenic | 50.0% |
| ! | TGGAAAGGGCATAATCCGTG+TGG | - | chr1.3:43580357-43580376 | MS.gene81736:intron | 50.0% |
| ! | TTCAGGGGGATTTTCTTCGG+TGG | + | chr1.3:43579459-43579478 | None:intergenic | 50.0% |
| ! | TTTTATGTGGCTTCCGGAGC+AGG | - | chr1.3:43583678-43583697 | MS.gene81736:intron | 50.0% |
| !! | AACACTGGCTTTGGGTGATG+GGG | - | chr1.3:43580620-43580639 | MS.gene81736:intron | 50.0% |
| !! | AGAGGATTTGTTGGCCCTTC+TGG | + | chr1.3:43578712-43578731 | None:intergenic | 50.0% |
| !! | CAACACTGGCTTTGGGTGAT+GGG | - | chr1.3:43580619-43580638 | MS.gene81736:intron | 50.0% |
| !! | CACGGATAGCATCGATGGAA+AGG | - | chr1.3:43580342-43580361 | MS.gene81736:intron | 50.0% |
| !! | CCAATCCCAACACTGGCTTT+GGG | - | chr1.3:43580612-43580631 | MS.gene81736:intron | 50.0% |
| !! | GAAAGGTTTGCTGGTTCAGG+GGG | + | chr1.3:43579473-43579492 | None:intergenic | 50.0% |
| !!! | TTACGTGGCTGCCATTTTCC+AGG | + | chr1.3:43579827-43579846 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1.3:43582146-43582165 | None:intergenic | 55.0% | |
| ACATCGCGCAAAACCTTCCG+TGG | - | chr1.3:43583869-43583888 | MS.gene81736:intron | 55.0% | |
| ACTCTTGATCCGGGAGAGCT+TGG | - | chr1.3:43579786-43579805 | MS.gene81736:intron | 55.0% | |
| AGGTGGCTGGAAAGAACGGT+GGG | - | chr1.3:43580562-43580581 | MS.gene81736:intron | 55.0% | |
| CACTCACACCACCAGCATGA+GGG | + | chr1.3:43583933-43583952 | None:intergenic | 55.0% | |
| CAGCTCGTTCTCACACCAGA+AGG | - | chr1.3:43578694-43578713 | MS.gene81736:CDS | 55.0% | |
| CATCGCGCAAAACCTTCCGT+GGG | - | chr1.3:43583870-43583889 | MS.gene81736:intron | 55.0% | |
| CCACCAGAAGTTGACGACTG+GGG | + | chr1.3:43581805-43581824 | None:intergenic | 55.0% | |
| CCATCACCCAAAGCCAGTGT+TGG | + | chr1.3:43580621-43580640 | None:intergenic | 55.0% | |
| CCCTGGGTGGGCAAATTGTT+TGG | - | chr1.3:43581447-43581466 | MS.gene81736:intron | 55.0% | |
| CCGGAGCAGGTAAGACAACA+AGG | - | chr1.3:43583691-43583710 | MS.gene81736:intron | 55.0% | |
| CGCCATGGCTAACATACTGG+TGG | - | chr1.3:43581910-43581929 | MS.gene81736:intron | 55.0% | |
| GATTGAGGAACGTCAAGGCC+CGG | - | chr1.3:43579712-43579731 | MS.gene81736:intron | 55.0% | |
| GCACGGTGTTCCTAAAGACG+TGG | - | chr1.3:43581087-43581106 | MS.gene81736:intron | 55.0% | |
| GCAGTTATCCATGGATGCGG+AGG | + | chr1.3:43583321-43583340 | None:intergenic | 55.0% | |
| GCCACCAGAAGTTGACGACT+GGG | + | chr1.3:43581806-43581825 | None:intergenic | 55.0% | |
| GCCTGCAACTGCTGAAACCA+TGG | + | chr1.3:43581135-43581154 | None:intergenic | 55.0% | |
| GCTTCGGCCGTTAAGTTTGC+AGG | + | chr1.3:43581837-43581856 | None:intergenic | 55.0% | |
| GGAATCCCCTAGGAAAGAGG+TGG | - | chr1.3:43579353-43579372 | MS.gene81736:intron | 55.0% | |
| GGCAGCCACGTAAATGAGGA+GGG | - | chr1.3:43579834-43579853 | MS.gene81736:intron | 55.0% | |
| GGCATAATCCGTGTGGCTAG+AGG | - | chr1.3:43580364-43580383 | MS.gene81736:intron | 55.0% | |
| GGCCAGAACCTGGAAGTTCA+TGG | + | chr1.3:43583903-43583922 | None:intergenic | 55.0% | |
| GGCCTTAGTATGAGCCTGTG+AGG | - | chr1.3:43580810-43580829 | MS.gene81736:CDS | 55.0% | |
| GTCATTGGTACTTCCCTGGG+TGG | - | chr1.3:43581434-43581453 | MS.gene81736:intron | 55.0% | |
| TAGGAACAGGTTCAGGTGGC+TGG | - | chr1.3:43580549-43580568 | MS.gene81736:intron | 55.0% | |
| TCACTCACACCACCAGCATG+AGG | + | chr1.3:43583934-43583953 | None:intergenic | 55.0% | |
| TGGCAGCCACGTAAATGAGG+AGG | - | chr1.3:43579833-43579852 | MS.gene81736:intron | 55.0% | |
| ! | CATGGTAGTGAACCCACGGA+AGG | + | chr1.3:43583885-43583904 | None:intergenic | 55.0% |
| ! | CCCAAAGCCAGTGTTGGGAT+TGG | + | chr1.3:43580615-43580634 | None:intergenic | 55.0% |
| ! | GTGTTGCTCACTACACGCCA+TGG | - | chr1.3:43581895-43581914 | MS.gene81736:intron | 55.0% |
| !! | ACACTGGCTTTGGGTGATGG+GGG | - | chr1.3:43580621-43580640 | MS.gene81736:intron | 55.0% |
| !! | CCAACACTGGCTTTGGGTGA+TGG | - | chr1.3:43580618-43580637 | MS.gene81736:intron | 55.0% |
| !! | CCCAATCCCAACACTGGCTT+TGG | - | chr1.3:43580611-43580630 | MS.gene81736:intron | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr1.3:43582049-43582068 | MS.gene81736:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.3:43582192-43582211 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1.3:43582045-43582064 | None:intergenic | 60.0% | |
| CACCACCAGCATGAGGGAAG+AGG | + | chr1.3:43583927-43583946 | None:intergenic | 60.0% | |
| CACCAGCATGAGGGAAGAGG+TGG | + | chr1.3:43583924-43583943 | None:intergenic | 60.0% | |
| CACCTCTTCCCTCATGCTGG+TGG | - | chr1.3:43583922-43583941 | MS.gene81736:CDS | 60.0% | |
| CAGGTGGCTGGAAAGAACGG+TGG | - | chr1.3:43580561-43580580 | MS.gene81736:intron | 60.0% | |
| CAGTTGCAGGCATGACGCTG+TGG | - | chr1.3:43581144-43581163 | MS.gene81736:intron | 60.0% | |
| CCCCAGTCGTCAACTTCTGG+TGG | - | chr1.3:43581802-43581821 | MS.gene81736:intron | 60.0% | |
| CGGCCGAAGCCTATTCCCAA+TGG | - | chr1.3:43581847-43581866 | MS.gene81736:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr1.3:43582050-43582069 | MS.gene81736:intron | 60.0% | |
| GGCCACCAGAAGTTGACGAC+TGG | + | chr1.3:43581807-43581826 | None:intergenic | 60.0% | |
| GGGCGTCCTTTGCAGCAAAC+CGG | + | chr1.3:43579636-43579655 | None:intergenic | 60.0% | |
| TGGCCCCAGTCGTCAACTTC+TGG | - | chr1.3:43581799-43581818 | MS.gene81736:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1.3:43582077-43582096 | None:intergenic | 60.0% |
| ! | GAGCAACACGAAGCGCCCAT+TGG | + | chr1.3:43581884-43581903 | None:intergenic | 60.0% |
| !!! | GGCTGCCATTTTCCAGGCTG+TGG | + | chr1.3:43579821-43579840 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr1.3:43582062-43582081 | MS.gene81736:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1.3:43582075-43582094 | MS.gene81736:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr1.3:43582062-43582081 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr1.3:43582061-43582080 | MS.gene81736:intron | 65.0% | |
| GGCCACCTCTTCCCTCATGC+TGG | - | chr1.3:43583919-43583938 | MS.gene81736:CDS | 65.0% | |
| GGGAAGAGGTGGCCAGAACC+TGG | + | chr1.3:43583913-43583932 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1.3:43582044-43582063 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr1.3:43582061-43582080 | None:intergenic | 65.0% | |
| !! | CTGGCTTTGGGTGATGGGGG+AGG | - | chr1.3:43580624-43580643 | MS.gene81736:intron | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr1.3:43582060-43582079 | MS.gene81736:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr1.3:43582056-43582075 | MS.gene81736:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr1.3:43582055-43582074 | MS.gene81736:intron | 70.0% | |
| GCTGGCAGGTGCAGCGCTCT+TGG | - | chr1.3:43581779-43581798 | MS.gene81736:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 43578657 | 43583987 | 43578657 | ID=MS.gene81736 |
| chr1.3 | mRNA | 43578657 | 43583987 | 43578657 | ID=MS.gene81736.t1;Parent=MS.gene81736 |
| chr1.3 | exon | 43583894 | 43583987 | 43583894 | ID=MS.gene81736.t1.exon1;Parent=MS.gene81736.t1 |
| chr1.3 | CDS | 43583894 | 43583987 | 43583894 | ID=cds.MS.gene81736.t1;Parent=MS.gene81736.t1 |
| chr1.3 | exon | 43581458 | 43581720 | 43581458 | ID=MS.gene81736.t1.exon2;Parent=MS.gene81736.t1 |
| chr1.3 | CDS | 43581458 | 43581720 | 43581458 | ID=cds.MS.gene81736.t1;Parent=MS.gene81736.t1 |
| chr1.3 | exon | 43581149 | 43581360 | 43581149 | ID=MS.gene81736.t1.exon3;Parent=MS.gene81736.t1 |
| chr1.3 | CDS | 43581149 | 43581360 | 43581149 | ID=cds.MS.gene81736.t1;Parent=MS.gene81736.t1 |
| chr1.3 | exon | 43580634 | 43580865 | 43580634 | ID=MS.gene81736.t1.exon4;Parent=MS.gene81736.t1 |
| chr1.3 | CDS | 43580634 | 43580865 | 43580634 | ID=cds.MS.gene81736.t1;Parent=MS.gene81736.t1 |
| chr1.3 | exon | 43578657 | 43578944 | 43578657 | ID=MS.gene81736.t1.exon5;Parent=MS.gene81736.t1 |
| chr1.3 | CDS | 43578657 | 43578944 | 43578657 | ID=cds.MS.gene81736.t1;Parent=MS.gene81736.t1 |
| Gene Sequence |
| Protein sequence |
