Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81845.t1 | XP_024629966.1 | 78.4 | 310 | 53 | 2 | 346 | 647 | 7 | 310 | 2.50E-112 | 416.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81845.t1 | A0A2K3LEB1 | 82.2 | 225 | 40 | 0 | 423 | 647 | 36 | 260 | 1.7e-107 | 399.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057932 | MS.gene81845 | 0.912012 | 3.17E-83 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81845.t1 | MTR_8g045030 | 80.909 | 220 | 42 | 0 | 410 | 629 | 22 | 241 | 1.41e-129 | 383 |
| MS.gene81845.t1 | MTR_1g053910 | 78.017 | 232 | 20 | 2 | 144 | 346 | 111 | 340 | 2.76e-114 | 346 |
| MS.gene81845.t1 | MTR_0144s0030 | 70.485 | 227 | 58 | 2 | 414 | 634 | 42 | 265 | 6.52e-106 | 340 |
| MS.gene81845.t1 | MTR_3g008230 | 82.069 | 145 | 26 | 0 | 473 | 617 | 14 | 158 | 1.02e-82 | 260 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81845.t1 | AT3G57990 | 35.319 | 235 | 84 | 9 | 177 | 344 | 134 | 367 | 4.72e-25 | 107 |
Find 186 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTAATTACATGGAGAAAA+TGG | 0.201677 | 6.4:-53878718 | MS.gene81845:CDS |
| CCGTCGGCTGGGGCGATTGC+AGG | 0.212071 | 6.4:-53881376 | MS.gene81845:CDS |
| AAAGACTCCACAGCTGAAAA+TGG | 0.216299 | 6.4:+53878684 | None:intergenic |
| GTCGGGAAGGTGCCGTCGGC+TGG | 0.220747 | 6.4:-53881388 | MS.gene81845:CDS |
| TTTCTTGTGATGGATAAAAT+TGG | 0.227367 | 6.4:-53881223 | MS.gene81845:CDS |
| AGAACGACGGCGATTGTTTC+CGG | 0.247199 | 6.4:+53882045 | None:intergenic |
| CTTCTGAATGATAGTGGTTT+TGG | 0.256655 | 6.4:-53879336 | MS.gene81845:CDS |
| TCCGCAAAACGGTGGCGTTT+TGG | 0.257586 | 6.4:-53881467 | MS.gene81845:CDS |
| GGTTGTTTCCGATGGATTTC+CGG | 0.260806 | 6.4:+53882075 | None:intergenic |
| GGTTGTTTCCGATGGATTTC+CGG | 0.260806 | 6.4:+53882105 | None:intergenic |
| CTGAGGTTGCGGCGAGGACT+AGG | 0.264777 | 6.4:-53881339 | MS.gene81845:CDS |
| GTAGTGAACGACGGTGTTTC+CGG | 0.297462 | 6.4:+53881977 | None:intergenic |
| AAACTGAAAACAAAGAAAAT+TGG | 0.298983 | 6.4:-53882178 | MS.gene81845:intron |
| GCACCCTTCACCCACGCTTT+TGG | 0.299769 | 6.4:+53879015 | None:intergenic |
| AAGAGCTTGAGGAAAGAATT+AGG | 0.307321 | 6.4:-53879108 | MS.gene81845:CDS |
| GAGGACTAGGGTTCCGATTA+GGG | 0.309618 | 6.4:-53881326 | MS.gene81845:CDS |
| CGAGGACTAGGGTTCCGATT+AGG | 0.329022 | 6.4:-53881327 | MS.gene81845:CDS |
| TAGGGTTCCGACTGAGGTTA+AGG | 0.336363 | 6.4:-53881272 | MS.gene81845:CDS |
| AACTGGTGCTCACATGTTCT+TGG | 0.344802 | 6.4:-53878889 | MS.gene81845:CDS |
| GTTAAGGGCAAAAGCGCGTT+TGG | 0.345158 | 6.4:-53881256 | MS.gene81845:CDS |
| GCTAGTTGCTTGAGATTCAT+AGG | 0.350643 | 6.4:+53883049 | None:intergenic |
| TTGCAACCTCCGGAGTTTGC+AGG | 0.356875 | 6.4:+53878851 | None:intergenic |
| AAGGGAATGTCACACGATTA+AGG | 0.361485 | 6.4:-53879596 | MS.gene81845:CDS |
| GATCTTATGCGTTCAGTAGA+TGG | 0.363185 | 6.4:-53879387 | MS.gene81845:CDS |
| ATTAATTACATGGAGAAAAT+GGG | 0.373727 | 6.4:-53878717 | MS.gene81845:CDS |
| TCGGGAAGGTGCCGTCGGCT+GGG | 0.374474 | 6.4:-53881387 | MS.gene81845:CDS |
| GGCTGATGCGAGCAAGGAAT+TGG | 0.376840 | 6.4:-53880910 | MS.gene81845:CDS |
| TTTGTGGATTGTTGTTAGTC+TGG | 0.378384 | 6.4:-53883072 | MS.gene81845:CDS |
| CCACACTTTCTTTGTGGATT+GGG | 0.379824 | 6.4:-53879280 | MS.gene81845:CDS |
| CGGGAAGGTGCCGTCGGCTG+GGG | 0.380207 | 6.4:-53881386 | MS.gene81845:CDS |
| ATGTTGCTGTTTGTTGAGTT+TGG | 0.388269 | 6.4:+53881837 | None:intergenic |
| AGCGGACTTCCACTTCCTAA+TGG | 0.390759 | 6.4:-53878821 | MS.gene81845:intron |
| CTTCTAATATGTGTGCATAT+TGG | 0.393268 | 6.4:+53878935 | None:intergenic |
| ACGGCGATTGTTTCCGGTGG+TGG | 0.397466 | 6.4:+53882051 | None:intergenic |
| GGAGGAGGGAAAAGCTTTGA+GGG | 0.400312 | 6.4:-53880993 | MS.gene81845:CDS |
| CCAATACTGAATGATGGAAT+TGG | 0.408688 | 6.4:+53879642 | None:intergenic |
| CTGGGGTATCCTCATATAAC+TGG | 0.409514 | 6.4:-53878906 | MS.gene81845:CDS |
| AAGATGAGTTCAACTAGCTT+AGG | 0.410464 | 6.4:-53883118 | MS.gene81845:CDS |
| ACCGCGGCACGTCCCCTAAT+CGG | 0.411961 | 6.4:+53881313 | None:intergenic |
| TTCTTGTGATGGATAAAATT+GGG | 0.414253 | 6.4:-53881222 | MS.gene81845:CDS |
| TCCACACTTTCTTTGTGGAT+TGG | 0.420988 | 6.4:-53879281 | MS.gene81845:CDS |
| AGGAAAGAATTAGGATTGAA+TGG | 0.427994 | 6.4:-53879099 | MS.gene81845:CDS |
| ATTGGGCTTCTGAATGATAG+TGG | 0.428715 | 6.4:-53879342 | MS.gene81845:CDS |
| CCAATTCCATCATTCAGTAT+TGG | 0.434037 | 6.4:-53879642 | MS.gene81845:CDS |
| GCGGAAATCAGACGAGACTA+AGG | 0.435268 | 6.4:-53879550 | MS.gene81845:CDS |
| TTTGTTGAATCTCCGGTGAT+TGG | 0.435435 | 6.4:-53881421 | MS.gene81845:CDS |
| AAAAGTCCACACTTTCTTTG+TGG | 0.438527 | 6.4:-53879286 | MS.gene81845:CDS |
| TGGAGGAGGGAAAAGCTTTG+AGG | 0.441086 | 6.4:-53880994 | MS.gene81845:CDS |
| CAACATGTCGAAATCAAATC+AGG | 0.441154 | 6.4:-53881820 | MS.gene81845:intron |
| AGAAAGAATGAGAAGAAAAC+CGG | 0.442575 | 6.4:-53880969 | MS.gene81845:CDS |
| ATTTGAGTTTGTTGAATCTC+CGG | 0.443909 | 6.4:-53881428 | MS.gene81845:CDS |
| GTGGTGGAGGTTGTTTCCGA+TGG | 0.448491 | 6.4:+53882067 | None:intergenic |
| GTGGTGGAGGTTGTTTCCGA+TGG | 0.448491 | 6.4:+53882097 | None:intergenic |
| CGATGGATTTCCGGTGGTGG+AGG | 0.449121 | 6.4:+53882084 | None:intergenic |
| AGGAAGTGGAAGTCCGCTAA+TGG | 0.450533 | 6.4:+53878826 | None:intergenic |
| TTCCGATGGATTTCCGGTGG+TGG | 0.455029 | 6.4:+53882081 | None:intergenic |
| TATTGTGCAGATTAATTACA+TGG | 0.456575 | 6.4:-53878727 | MS.gene81845:intron |
| AGATTCCGATGAAGGAAAAT+CGG | 0.458921 | 6.4:-53879466 | MS.gene81845:CDS |
| GGAATGATGTGGAGGATCTT+CGG | 0.463224 | 6.4:-53881040 | MS.gene81845:CDS |
| TTAATCTGCTTCCCCGCCAT+TGG | 0.464776 | 6.4:+53879159 | None:intergenic |
| GGAGAGAATTCACTAGTGTA+AGG | 0.470518 | 6.4:-53881019 | MS.gene81845:CDS |
| GTGTATGAGCTTCCAATGGC+GGG | 0.473643 | 6.4:-53879171 | MS.gene81845:CDS |
| AGGGTTCCGACTGAGGTTAA+GGG | 0.474352 | 6.4:-53881271 | MS.gene81845:CDS |
| GAGGTTCTGCAGGCGGAGAA+TGG | 0.475648 | 6.4:-53881071 | MS.gene81845:intron |
| AAGACTCCACAGCTGAAAAT+GGG | 0.477864 | 6.4:+53878685 | None:intergenic |
| GAGGGTTCCGTTTCTTGTGA+TGG | 0.480532 | 6.4:-53881233 | MS.gene81845:CDS |
| GTGATTGGTGGGTTTAGTGT+CGG | 0.483284 | 6.4:-53881406 | MS.gene81845:CDS |
| TGCTGTTTGTTGAGTTTGGA+TGG | 0.483301 | 6.4:+53881841 | None:intergenic |
| GATTGATGCATATCTGCAAC+TGG | 0.483385 | 6.4:-53879311 | MS.gene81845:CDS |
| ACTTTGAGAAAGAGCATATG+TGG | 0.489006 | 6.4:-53879248 | MS.gene81845:CDS |
| GATTTGAAGAATTTGAAGAA+AGG | 0.489031 | 6.4:-53881172 | MS.gene81845:CDS |
| GGTTATGCGTTTCCGCAAAA+CGG | 0.490258 | 6.4:-53881478 | MS.gene81845:CDS |
| TTAAGGGCAAAAGCGCGTTT+GGG | 0.490448 | 6.4:-53881255 | MS.gene81845:CDS |
| TGGAATTGGCCCTAGGTCCC+TGG | 0.491402 | 6.4:+53879656 | None:intergenic |
| TGATTGGTGGGTTTAGTGTC+GGG | 0.491545 | 6.4:-53881405 | MS.gene81845:CDS |
| AGATGAGTTCAACTAGCTTA+GGG | 0.494091 | 6.4:-53883117 | MS.gene81845:CDS |
| TTCAAATCCCCACACTCCGC+TGG | 0.499435 | 6.4:+53881187 | None:intergenic |
| AACATTTGCCAGCGGAGTGT+GGG | 0.501336 | 6.4:-53881195 | MS.gene81845:CDS |
| CGCATAAGATCATATACCTT+AGG | 0.501801 | 6.4:+53879399 | None:intergenic |
| GGAATTGGAGAAGGCGTTGA+GGG | 0.502532 | 6.4:-53880895 | MS.gene81845:CDS |
| GATACAAAGCTACTATTAGT+CGG | 0.512490 | 6.4:+53878961 | None:intergenic |
| GCGATTGTTTCCGGTGGTGG+AGG | 0.514663 | 6.4:+53882054 | None:intergenic |
| GAAGCACAAGATTCCGATGA+AGG | 0.515554 | 6.4:-53879474 | MS.gene81845:CDS |
| GTTGAATCTCCGGTGATTGG+TGG | 0.516218 | 6.4:-53881418 | MS.gene81845:CDS |
| TGAGGTTGCGGCGAGGACTA+GGG | 0.516942 | 6.4:-53881338 | MS.gene81845:CDS |
| TTATATGAGGATACCCCAGC+TGG | 0.517522 | 6.4:+53878910 | None:intergenic |
| GACGGTGTTTCCGGTGGTGA+AGG | 0.520153 | 6.4:+53881986 | None:intergenic |
| GTTCTTGGATATATGAAAGA+AGG | 0.521826 | 6.4:-53878874 | MS.gene81845:CDS |
| CGTCGGCTGGGGCGATTGCA+GGG | 0.524791 | 6.4:-53881375 | MS.gene81845:CDS |
| TTGGAAGTGAACGACGGCGT+TGG | 0.525311 | 6.4:+53881928 | None:intergenic |
| GAAAGAAGGCCTGCAAACTC+CGG | 0.525332 | 6.4:-53878860 | MS.gene81845:CDS |
| GAACATTTGCCAGCGGAGTG+TGG | 0.526006 | 6.4:-53881196 | MS.gene81845:CDS |
| GAAAGAAGATGATGTACATA+GGG | 0.529027 | 6.4:-53879193 | MS.gene81845:CDS |
| TTCACTAGTGTAAGGATTGG+AGG | 0.529400 | 6.4:-53881011 | MS.gene81845:CDS |
| TGAAAGAAGATGATGTACAT+AGG | 0.529761 | 6.4:-53879194 | MS.gene81845:CDS |
| CAGTATTGGACTGACACAAT+CGG | 0.531627 | 6.4:-53879628 | MS.gene81845:CDS |
| ATACAAAGCTACTATTAGTC+GGG | 0.532695 | 6.4:+53878962 | None:intergenic |
| GAATTCACTAGTGTAAGGAT+TGG | 0.533076 | 6.4:-53881014 | MS.gene81845:CDS |
| GAAGAATTTGAAGAAAGGAA+AGG | 0.533083 | 6.4:-53881167 | MS.gene81845:intron |
| GCTAATGGATTTGCAACCTC+CGG | 0.536842 | 6.4:+53878841 | None:intergenic |
| CACATATTAGAAGATCCAGC+TGG | 0.542424 | 6.4:-53878925 | MS.gene81845:CDS |
| TCCGATTAGGGGACGTGCCG+CGG | 0.544241 | 6.4:-53881314 | MS.gene81845:CDS |
| GGTGTAGTGAACGACGGCGT+TGG | 0.546913 | 6.4:+53881909 | None:intergenic |
| GAAACCAAAAGCGTGGGTGA+AGG | 0.549334 | 6.4:-53879019 | MS.gene81845:CDS |
| GACTGAGGCTGATGCGAGCA+AGG | 0.549803 | 6.4:-53880916 | MS.gene81845:CDS |
| CCTGCAATCGCCCCAGCCGA+CGG | 0.550116 | 6.4:+53881376 | None:intergenic |
| ATGTGAGCACCAGTTATATG+AGG | 0.550231 | 6.4:+53878897 | None:intergenic |
| GTCAGTCCAATACTGAATGA+TGG | 0.553052 | 6.4:+53879636 | None:intergenic |
| GATTAAAGTCGATCTTTGCT+CGG | 0.553214 | 6.4:-53879142 | MS.gene81845:CDS |
| TTGAATCTCCGGTGATTGGT+GGG | 0.555286 | 6.4:-53881417 | MS.gene81845:CDS |
| AGGGCAAAAGCGCGTTTGGG+AGG | 0.557667 | 6.4:-53881252 | MS.gene81845:CDS |
| GGGCAAAAGCGCGTTTGGGA+GGG | 0.561677 | 6.4:-53881251 | MS.gene81845:CDS |
| AAACCAAAAGCGTGGGTGAA+GGG | 0.563573 | 6.4:-53879018 | MS.gene81845:CDS |
| AAATGATTACCATTAGGAAG+TGG | 0.563858 | 6.4:+53878812 | None:intergenic |
| CACAATCGGAGGAGGAGCAA+GGG | 0.564446 | 6.4:-53879614 | MS.gene81845:CDS |
| CTCCACCACCGGAAATCCAT+CGG | 0.564795 | 6.4:-53882083 | MS.gene81845:CDS |
| TCGGAAACAACCTCCACCAC+CGG | 0.567284 | 6.4:-53882064 | MS.gene81845:CDS |
| TCGGAAACAACCTCCACCAC+CGG | 0.567284 | 6.4:-53882094 | MS.gene81845:CDS |
| ACTAGTGTAAGGATTGGAGG+AGG | 0.570999 | 6.4:-53881008 | MS.gene81845:CDS |
| TTCTGTGAGGGTGACAGAGT+TGG | 0.571382 | 6.4:-53879064 | MS.gene81845:CDS |
| ACACAATCGGAGGAGGAGCA+AGG | 0.575052 | 6.4:-53879615 | MS.gene81845:CDS |
| TAGTGTCGGGAAGGTGCCGT+CGG | 0.576506 | 6.4:-53881392 | MS.gene81845:CDS |
| ACACTAAACCCACCAATCAC+CGG | 0.580138 | 6.4:+53881409 | None:intergenic |
| AAAATCCACCGGAAATCCAT+CGG | 0.587795 | 6.4:-53882113 | MS.gene81845:CDS |
| CGTCATTTCTCAAAATCCAC+CGG | 0.591283 | 6.4:-53882124 | MS.gene81845:CDS |
| TTGATATCAACTTCTAGTGG+GGG | 0.591702 | 6.4:+53883022 | None:intergenic |
| CCCAATCCACAAAGAAAGTG+TGG | 0.593786 | 6.4:+53879280 | None:intergenic |
| TCGTCGTCTTCCTTCACCAC+CGG | 0.594583 | 6.4:-53881996 | MS.gene81845:CDS |
| TGGTGGGTTTAGTGTCGGGA+AGG | 0.594609 | 6.4:-53881401 | MS.gene81845:CDS |
| TAATTATTCTGCTTCTGTGA+GGG | 0.594744 | 6.4:-53879076 | MS.gene81845:CDS |
| TCAGCCTCAGTCGATTTCCC+AGG | 0.596668 | 6.4:+53880927 | None:intergenic |
| ACATATTAGAAGATCCAGCT+GGG | 0.599525 | 6.4:-53878924 | MS.gene81845:CDS |
| AGGCAGCAATAAAGAGCTTG+AGG | 0.600413 | 6.4:-53879119 | MS.gene81845:CDS |
| GAGGAGGGAAAAGCTTTGAG+GGG | 0.601233 | 6.4:-53880992 | MS.gene81845:CDS |
| AATTCAAGCTCCAACAGTGG+TGG | 0.602493 | 6.4:+53880869 | None:intergenic |
| TGTTTCCGATGGATTTCCGG+TGG | 0.603002 | 6.4:+53882108 | None:intergenic |
| GGAGGTTGCAAATCCATTAG+CGG | 0.604653 | 6.4:-53878839 | MS.gene81845:CDS |
| GCACAAGATGAGTATACCTA+AGG | 0.607751 | 6.4:-53879415 | MS.gene81845:CDS |
| TGGACTGACACAATCGGAGG+AGG | 0.610585 | 6.4:-53879622 | MS.gene81845:CDS |
| TGAATGATGGAATTGGCCCT+AGG | 0.613450 | 6.4:+53879649 | None:intergenic |
| TTAATTACATGGAGAAAATG+GGG | 0.614154 | 6.4:-53878716 | MS.gene81845:CDS |
| TGCGAGCAAGGAATTGGAGA+AGG | 0.616295 | 6.4:-53880904 | MS.gene81845:CDS |
| CGGAAATCAGACGAGACTAA+GGG | 0.616889 | 6.4:-53879549 | MS.gene81845:CDS |
| TGAGTTTGGATGGTGAATGA+CGG | 0.616904 | 6.4:+53881851 | None:intergenic |
| ACATTTGCCAGCGGAGTGTG+GGG | 0.619702 | 6.4:-53881194 | MS.gene81845:CDS |
| TCTTGTGATGGATAAAATTG+GGG | 0.621136 | 6.4:-53881221 | MS.gene81845:CDS |
| AGGAATTGGAGAAGGCGTTG+AGG | 0.624601 | 6.4:-53880896 | MS.gene81845:CDS |
| TATGCGTTTCCGCAAAACGG+TGG | 0.624687 | 6.4:-53881475 | MS.gene81845:CDS |
| GGTGTATGAGCTTCCAATGG+CGG | 0.625971 | 6.4:-53879172 | MS.gene81845:CDS |
| TGTGATGGATAAAATTGGGG+TGG | 0.626777 | 6.4:-53881218 | MS.gene81845:CDS |
| TGGATTGCTGAGGAATGATG+TGG | 0.628104 | 6.4:-53881051 | MS.gene81845:CDS |
| CGTCGTTCTTCATCAACAGA+AGG | 0.628310 | 6.4:-53882031 | MS.gene81845:CDS |
| TTTGATATCAACTTCTAGTG+GGG | 0.628815 | 6.4:+53883021 | None:intergenic |
| GTAATTATTCTGCTTCTGTG+AGG | 0.633266 | 6.4:-53879077 | MS.gene81845:CDS |
| TGTTTCCGATGGATTTCCGG+TGG | 0.636337 | 6.4:+53882078 | None:intergenic |
| GGTAATGTTGATGAAGATGC+TGG | 0.638620 | 6.4:+53881872 | None:intergenic |
| AGAAGGCCTGCAAACTCCGG+AGG | 0.639449 | 6.4:-53878857 | MS.gene81845:CDS |
| TATCGAGAAACCAAAAGCGT+GGG | 0.644655 | 6.4:-53879025 | MS.gene81845:CDS |
| CTATCGAGAAACCAAAAGCG+TGG | 0.646447 | 6.4:-53879026 | MS.gene81845:CDS |
| GAAAGAATGAGAAGAAAACC+GGG | 0.648044 | 6.4:-53880968 | MS.gene81845:CDS |
| GAATTGGAGAAGGCGTTGAG+GGG | 0.650714 | 6.4:-53880894 | MS.gene81845:CDS |
| CGGGGACTGAGGTTGCGGCG+AGG | 0.653848 | 6.4:-53881345 | MS.gene81845:CDS |
| TGTATGAGCTTCCAATGGCG+GGG | 0.654369 | 6.4:-53879170 | MS.gene81845:CDS |
| GTCACACGATTAAGGAGCGG+TGG | 0.654638 | 6.4:-53879588 | MS.gene81845:CDS |
| TAGGGTGTATGAGCTTCCAA+TGG | 0.657008 | 6.4:-53879175 | MS.gene81845:CDS |
| TGGGGTGGAACATTTGCCAG+CGG | 0.659065 | 6.4:-53881203 | MS.gene81845:CDS |
| AGGACTAGGGTTCCGATTAG+GGG | 0.661644 | 6.4:-53881325 | MS.gene81845:CDS |
| ACGACGGCGATTGTTTCCGG+TGG | 0.662769 | 6.4:+53882048 | None:intergenic |
| AGGCGGAGAATGGATTGCTG+AGG | 0.664151 | 6.4:-53881061 | MS.gene81845:CDS |
| AAAATGCAAAACAAAGACTG+AGG | 0.670532 | 6.4:-53879437 | MS.gene81845:CDS |
| CTAGTGTAAGGATTGGAGGA+GGG | 0.671920 | 6.4:-53881007 | MS.gene81845:CDS |
| ATAACCACTAAAATCTGACC+CGG | 0.690957 | 6.4:+53880950 | None:intergenic |
| TAAAGTCGATCTTTGCTCGG+AGG | 0.692979 | 6.4:-53879139 | MS.gene81845:CDS |
| GACGTTGGTGTAGTGAACGA+CGG | 0.699321 | 6.4:+53881903 | None:intergenic |
| GATTAGATTAAGCAAGACTG+AGG | 0.699954 | 6.4:-53879226 | MS.gene81845:CDS |
| ATGCTGGTGTTTGAAGACGT+TGG | 0.701659 | 6.4:+53881888 | None:intergenic |
| TTATCCTGGGAAATCGACTG+AGG | 0.704241 | 6.4:-53880931 | MS.gene81845:CDS |
| GTGAACGACGGTGTTTCCGG+TGG | 0.711663 | 6.4:+53881980 | None:intergenic |
| CATATTAGAAGATCCAGCTG+GGG | 0.713877 | 6.4:-53878923 | MS.gene81845:CDS |
| GACGCTCGTGTAGTGAACGA+CGG | 0.714415 | 6.4:+53881968 | None:intergenic |
| AATGTCACACGATTAAGGAG+CGG | 0.717340 | 6.4:-53879591 | MS.gene81845:CDS |
| ATTGCTGAGGAATGATGTGG+AGG | 0.720743 | 6.4:-53881048 | MS.gene81845:CDS |
| CTTCTGTTGATGAAGAACGA+CGG | 0.721945 | 6.4:+53882032 | None:intergenic |
| TATTGGACTGACACAATCGG+AGG | 0.731566 | 6.4:-53879625 | MS.gene81845:CDS |
| ACGGCGTTGGAAGTGAACGA+CGG | 0.749087 | 6.4:+53881922 | None:intergenic |
| ACGGCGTTGGAAGTGAACGA+CGG | 0.758516 | 6.4:+53881941 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATATAAATATGTTAATT+TGG | - | chr6.4:53881184-53881203 | MS.gene81845:CDS | 10.0% |
| !! | TTGAATAAAATTAAATACAT+TGG | - | chr6.4:53879211-53879230 | MS.gene81845:CDS | 10.0% |
| !!! | AATTTTGTTTATAATATATC+TGG | - | chr6.4:53881061-53881080 | MS.gene81845:CDS | 10.0% |
| !!! | ATGTATTTAATTTTATTCAA+AGG | + | chr6.4:53879211-53879230 | None:intergenic | 10.0% |
| !! | TAAAAACAACAAATACATTA+TGG | + | chr6.4:53882014-53882033 | None:intergenic | 15.0% |
| !! | TATATAAAATGATTACCATT+AGG | + | chr6.4:53882995-53883014 | None:intergenic | 15.0% |
| !!! | AAGAAAATTTGATTTCAATT+TGG | - | chr6.4:53880103-53880122 | MS.gene81845:intron | 15.0% |
| !!! | ACATGTTTTATTATTAAAGT+TGG | - | chr6.4:53881571-53881590 | MS.gene81845:intron | 15.0% |
| !!! | AGAAAATTTGATTTCAATTT+GGG | - | chr6.4:53880104-53880123 | MS.gene81845:intron | 15.0% |
| !!! | ATATATTTAAAACAACAAAG+TGG | - | chr6.4:53883018-53883037 | MS.gene81845:CDS | 15.0% |
| !!! | TATAAATATGTTAATTTGGT+TGG | - | chr6.4:53881188-53881207 | MS.gene81845:CDS | 15.0% |
| !! | AAACCATTAATTACATCTAA+TGG | + | chr6.4:53882097-53882116 | None:intergenic | 20.0% |
| !! | AAACCATTAGATGTAATTAA+TGG | - | chr6.4:53882091-53882110 | MS.gene81845:CDS | 20.0% |
| !! | AAACTGAAAACAAAGAAAAT+TGG | - | chr6.4:53879620-53879639 | MS.gene81845:CDS | 20.0% |
| !! | AAGTTCAGCTATAATTTAAA+TGG | - | chr6.4:53881395-53881414 | MS.gene81845:CDS | 20.0% |
| !! | AGAAGAAAAAATGAGATAAT+TGG | - | chr6.4:53882438-53882457 | MS.gene81845:intron | 20.0% |
| !! | ATATTAAAAATCCTTATGCA+GGG | + | chr6.4:53879553-53879572 | None:intergenic | 20.0% |
| !! | ATTAATTACATGGAGAAAAT+GGG | - | chr6.4:53883081-53883100 | MS.gene81845:CDS | 20.0% |
| !! | CATTGAACTAAAAAATATGA+TGG | + | chr6.4:53881744-53881763 | None:intergenic | 20.0% |
| !! | CTATAATTTAAATGGTTTCA+AGG | - | chr6.4:53881403-53881422 | MS.gene81845:CDS | 20.0% |
| !! | GAACAAAATTGAAATCAAAT+TGG | - | chr6.4:53881368-53881387 | MS.gene81845:CDS | 20.0% |
| !! | GAAGAAAAAATGAGATAATT+GGG | - | chr6.4:53882439-53882458 | MS.gene81845:intron | 20.0% |
| !! | TCTCAATTTGAAAATTGTAT+TGG | - | chr6.4:53880179-53880198 | MS.gene81845:intron | 20.0% |
| !! | TTTGTTTATAATATATCTGG+TGG | - | chr6.4:53881064-53881083 | MS.gene81845:intron | 20.0% |
| !!! | ACATTAGTTTGTTTTTGTTT+TGG | - | chr6.4:53881509-53881528 | MS.gene81845:intron | 20.0% |
| !!! | ATTTTCTTTGTTTTCAGTTT+TGG | + | chr6.4:53879620-53879639 | None:intergenic | 20.0% |
| !!! | CATTAGTTTGTTTTTGTTTT+GGG | - | chr6.4:53881510-53881529 | MS.gene81845:intron | 20.0% |
| !!! | GTGTTTTTGTTAGTTTAAAA+TGG | - | chr6.4:53880043-53880062 | MS.gene81845:intron | 20.0% |
| !!! | GTTGACTTATTTGTTTTTAT+GGG | - | chr6.4:53881476-53881495 | MS.gene81845:CDS | 20.0% |
| !!! | TGTTAAGTATCCAAATTTTA+TGG | - | chr6.4:53878802-53878821 | MS.gene81845:intron | 20.0% |
| !!! | TGTTGACTTATTTGTTTTTA+TGG | - | chr6.4:53881475-53881494 | MS.gene81845:CDS | 20.0% |
| !!! | TTTTCTTTGTTTTCAGTTTT+GGG | + | chr6.4:53879619-53879638 | None:intergenic | 20.0% |
| ! | AATATTGTAGGAAAGAATGT+CGG | - | chr6.4:53878981-53879000 | MS.gene81845:CDS | 25.0% |
| ! | CACATTAATCAGTCAATTTA+GGG | + | chr6.4:53880147-53880166 | None:intergenic | 25.0% |
| ! | CATATTAAAAATCCTTATGC+AGG | + | chr6.4:53879554-53879573 | None:intergenic | 25.0% |
| ! | GAATTCAAAATAGATGTAGT+CGG | - | chr6.4:53880947-53880966 | MS.gene81845:CDS | 25.0% |
| ! | GATTAATTACATGGAGAAAA+TGG | - | chr6.4:53883080-53883099 | MS.gene81845:CDS | 25.0% |
| ! | GATTTGAAGAATTTGAAGAA+AGG | - | chr6.4:53880626-53880645 | MS.gene81845:intron | 25.0% |
| ! | TAATTTAAATGGTTTCAAGG+AGG | - | chr6.4:53881406-53881425 | MS.gene81845:CDS | 25.0% |
| ! | TATTGTGCAGATTAATTACA+TGG | - | chr6.4:53883071-53883090 | MS.gene81845:CDS | 25.0% |
| ! | TCTTTCCTACAATATTTAAG+TGG | + | chr6.4:53878977-53878996 | None:intergenic | 25.0% |
| ! | TTAATTACATGGAGAAAATG+GGG | - | chr6.4:53883082-53883101 | MS.gene81845:CDS | 25.0% |
| ! | TTTGTCCACTTAAATATTGT+AGG | - | chr6.4:53878969-53878988 | MS.gene81845:CDS | 25.0% |
| ! | TTTGTTCTTGCCATAAAATT+TGG | + | chr6.4:53878815-53878834 | None:intergenic | 25.0% |
| !! | ACAAAAACCATTTTAAACCT+AGG | - | chr6.4:53880246-53880265 | MS.gene81845:intron | 25.0% |
| !! | AGAGACATATTTAAGTTCAA+TGG | - | chr6.4:53881299-53881318 | MS.gene81845:CDS | 25.0% |
| !! | AGTTCGATTTTAGATGTTAA+GGG | - | chr6.4:53880299-53880318 | MS.gene81845:intron | 25.0% |
| !! | ATAAGGTGAAACATGATTTT+TGG | + | chr6.4:53879264-53879283 | None:intergenic | 25.0% |
| !! | ATTTTATCCATCACAAGAAA+CGG | + | chr6.4:53880575-53880594 | None:intergenic | 25.0% |
| !! | CTGCATAAGGATTTTTAATA+TGG | - | chr6.4:53879552-53879571 | MS.gene81845:CDS | 25.0% |
| !! | GTTTCACCTTATTTAAGTTA+AGG | - | chr6.4:53879272-53879291 | MS.gene81845:CDS | 25.0% |
| !! | TTTTGATATCAACTTCTAGT+GGG | + | chr6.4:53878781-53878800 | None:intergenic | 25.0% |
| !!! | AGAACAAATAAAAGCATTAG+TGG | - | chr6.4:53878827-53878846 | MS.gene81845:CDS | 25.0% |
| !!! | CTAAAAAATATGATGGATGA+TGG | + | chr6.4:53881737-53881756 | None:intergenic | 25.0% |
| !!! | TGGTTTTGTTTAGATCAATA+AGG | - | chr6.4:53880063-53880082 | MS.gene81845:intron | 25.0% |
| !!! | TTCTTGTGATGGATAAAATT+GGG | - | chr6.4:53880576-53880595 | MS.gene81845:intron | 25.0% |
| !!! | TTTCTTGTGATGGATAAAAT+TGG | - | chr6.4:53880575-53880594 | MS.gene81845:intron | 25.0% |
| !!! | TTTCTTTGTTTTCAGTTTTG+GGG | + | chr6.4:53879618-53879637 | None:intergenic | 25.0% |
| !!! | TTTTAAGTGATTTTCTGCAT+TGG | - | chr6.4:53881322-53881341 | MS.gene81845:CDS | 25.0% |
| AAAATGCAAAACAAAGACTG+AGG | - | chr6.4:53882361-53882380 | MS.gene81845:intron | 30.0% | |
| AAACCATTTCTGCAGAAAAA+TGG | + | chr6.4:53882054-53882073 | None:intergenic | 30.0% | |
| AAATGATTACCATTAGGAAG+TGG | + | chr6.4:53882989-53883008 | None:intergenic | 30.0% | |
| AACAACAATCCACAAAAAGT+TGG | + | chr6.4:53878722-53878741 | None:intergenic | 30.0% | |
| AACTTTACAGGATGTTGAAA+TGG | - | chr6.4:53881901-53881920 | MS.gene81845:CDS | 30.0% | |
| AATAAGGTTTCTCTGTTAGT+TGG | - | chr6.4:53880079-53880098 | MS.gene81845:intron | 30.0% | |
| AATTTGAAGAAAGGAAAGGT+TGG | - | chr6.4:53880635-53880654 | MS.gene81845:intron | 30.0% | |
| AGAAAGAATGAGAAGAAAAC+CGG | - | chr6.4:53880829-53880848 | MS.gene81845:intron | 30.0% | |
| AGGAAAGAATTAGGATTGAA+TGG | - | chr6.4:53882699-53882718 | MS.gene81845:intron | 30.0% | |
| AGTAGATAGAATAAGACACT+GGG | + | chr6.4:53878907-53878926 | None:intergenic | 30.0% | |
| ATACAAAGCTACTATTAGTC+GGG | + | chr6.4:53882839-53882858 | None:intergenic | 30.0% | |
| CTTCTAATATGTGTGCATAT+TGG | + | chr6.4:53882866-53882885 | None:intergenic | 30.0% | |
| CTTGTTAATGTGATGTTTGT+GGG | - | chr6.4:53879492-53879511 | MS.gene81845:CDS | 30.0% | |
| GAAAGAAGATGATGTACATA+GGG | - | chr6.4:53882605-53882624 | MS.gene81845:intron | 30.0% | |
| GAAGAATTTGAAGAAAGGAA+AGG | - | chr6.4:53880631-53880650 | MS.gene81845:intron | 30.0% | |
| GATACAAAGCTACTATTAGT+CGG | + | chr6.4:53882840-53882859 | None:intergenic | 30.0% | |
| GCACATTAATCAGTCAATTT+AGG | + | chr6.4:53880148-53880167 | None:intergenic | 30.0% | |
| GTACTACTAAACTAAGCATT+GGG | - | chr6.4:53881630-53881649 | MS.gene81845:intron | 30.0% | |
| GTTCTTGGATATATGAAAGA+AGG | - | chr6.4:53882924-53882943 | MS.gene81845:intron | 30.0% | |
| TAAAAACTAAGAACAAGCCT+TGG | + | chr6.4:53881224-53881243 | None:intergenic | 30.0% | |
| TAATTATTCTGCTTCTGTGA+GGG | - | chr6.4:53882722-53882741 | MS.gene81845:intron | 30.0% | |
| TAGTAGATAGAATAAGACAC+TGG | + | chr6.4:53878908-53878927 | None:intergenic | 30.0% | |
| TGAAAGAAGATGATGTACAT+AGG | - | chr6.4:53882604-53882623 | MS.gene81845:intron | 30.0% | |
| TGTACTACTAAACTAAGCAT+TGG | - | chr6.4:53881629-53881648 | MS.gene81845:intron | 30.0% | |
| TTGTTAATGTGATGTTTGTG+GGG | - | chr6.4:53879493-53879512 | MS.gene81845:CDS | 30.0% | |
| TTTGATATCAACTTCTAGTG+GGG | + | chr6.4:53878780-53878799 | None:intergenic | 30.0% | |
| ! | AACCATTTTAAACCTAGGTT+TGG | - | chr6.4:53880251-53880270 | MS.gene81845:intron | 30.0% |
| ! | ACCATTTTAAACCTAGGTTT+GGG | - | chr6.4:53880252-53880271 | MS.gene81845:intron | 30.0% |
| ! | CATTGTATGCAAGTGAATTT+TGG | - | chr6.4:53881676-53881695 | MS.gene81845:intron | 30.0% |
| ! | CTTTTGATATCAACTTCTAG+TGG | + | chr6.4:53878782-53878801 | None:intergenic | 30.0% |
| ! | GAGTTCGATTTTAGATGTTA+AGG | - | chr6.4:53880298-53880317 | MS.gene81845:intron | 30.0% |
| ! | TGTAGGAAGCAAATTTTGTT+GGG | + | chr6.4:53879593-53879612 | None:intergenic | 30.0% |
| ! | TTTAAGTTCAGCTATAGAGA+TGG | - | chr6.4:53881346-53881365 | MS.gene81845:CDS | 30.0% |
| ! | TTTCTGCAGAAAAATGGTTT+TGG | + | chr6.4:53882048-53882067 | None:intergenic | 30.0% |
| !! | AAACCATTTTTCTGCAGAAA+TGG | - | chr6.4:53882048-53882067 | MS.gene81845:CDS | 30.0% |
| !! | AAAGTTGGTATAGAAGTAGA+AGG | - | chr6.4:53881586-53881605 | MS.gene81845:intron | 30.0% |
| !! | AAGTTGGTATAGAAGTAGAA+GGG | - | chr6.4:53881587-53881606 | MS.gene81845:intron | 30.0% |
| !! | ATTTGAGTTTGTTGAATCTC+CGG | - | chr6.4:53880370-53880389 | MS.gene81845:intron | 30.0% |
| !! | TCTTGTGATGGATAAAATTG+GGG | - | chr6.4:53880577-53880596 | MS.gene81845:intron | 30.0% |
| !!! | ATTTTTTATTCTGGCATGCA+CGG | + | chr6.4:53879347-53879366 | None:intergenic | 30.0% |
| !!! | CAAATTTCTAGTGTCAGTTT+TGG | - | chr6.4:53881111-53881130 | MS.gene81845:intron | 30.0% |
| !!! | GTGATGTCCATTTTTTATTC+TGG | + | chr6.4:53879356-53879375 | None:intergenic | 30.0% |
| !!! | TCTTTTTTGAGCAAACCATT+GGG | - | chr6.4:53878878-53878897 | MS.gene81845:CDS | 30.0% |
| !!! | TTCTTTGTTTTCAGTTTTGG+GGG | + | chr6.4:53879617-53879636 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTGAGCAAACCAT+TGG | - | chr6.4:53878877-53878896 | MS.gene81845:CDS | 30.0% |
| AAAAGTCCACACTTTCTTTG+TGG | - | chr6.4:53882512-53882531 | MS.gene81845:intron | 35.0% | |
| AAAGAAAAATCCCCAAACCT+AGG | + | chr6.4:53880266-53880285 | None:intergenic | 35.0% | |
| AAGAGCTTGAGGAAAGAATT+AGG | - | chr6.4:53882690-53882709 | MS.gene81845:intron | 35.0% | |
| ACAGAACACAACTTTCTTGA+TGG | + | chr6.4:53881830-53881849 | None:intergenic | 35.0% | |
| ACATATTAGAAGATCCAGCT+GGG | - | chr6.4:53882874-53882893 | MS.gene81845:intron | 35.0% | |
| AGAAAAATACCTCAATCTGC+CGG | + | chr6.4:53878854-53878873 | None:intergenic | 35.0% | |
| AGATTCCGATGAAGGAAAAT+CGG | - | chr6.4:53882332-53882351 | MS.gene81845:intron | 35.0% | |
| AGTAAGTTCCAGTTAAACTC+AGG | + | chr6.4:53878936-53878955 | None:intergenic | 35.0% | |
| AGTGGACAAAGAATAAACCA+TGG | + | chr6.4:53878959-53878978 | None:intergenic | 35.0% | |
| ATAACCACTAAAATCTGACC+CGG | + | chr6.4:53880851-53880870 | None:intergenic | 35.0% | |
| ATTAACAAGGAAGTTGAGTC+TGG | + | chr6.4:53879481-53879500 | None:intergenic | 35.0% | |
| CAACATGTCGAAATCAAATC+AGG | - | chr6.4:53879978-53879997 | MS.gene81845:intron | 35.0% | |
| CAGTTCGACAAGAATTCAAA+CGG | + | chr6.4:53881027-53881046 | None:intergenic | 35.0% | |
| CCAATTCCATCATTCAGTAT+TGG | - | chr6.4:53882156-53882175 | MS.gene81845:CDS | 35.0% | |
| CCACAAACATCACATTAACA+AGG | + | chr6.4:53879494-53879513 | None:intergenic | 35.0% | |
| CCTTGTTAATGTGATGTTTG+TGG | - | chr6.4:53879491-53879510 | MS.gene81845:CDS | 35.0% | |
| CGCATAAGATCATATACCTT+AGG | + | chr6.4:53882402-53882421 | None:intergenic | 35.0% | |
| CTGTAAAGTTTCAACTTCAC+AGG | + | chr6.4:53881891-53881910 | None:intergenic | 35.0% | |
| CTGTGAAGTTGAAACTTTAC+AGG | - | chr6.4:53881889-53881908 | MS.gene81845:CDS | 35.0% | |
| GAAAGAATGAGAAGAAAACC+GGG | - | chr6.4:53880830-53880849 | MS.gene81845:intron | 35.0% | |
| GAATTCACTAGTGTAAGGAT+TGG | - | chr6.4:53880784-53880803 | MS.gene81845:intron | 35.0% | |
| GATTAGATTAAGCAAGACTG+AGG | - | chr6.4:53882572-53882591 | MS.gene81845:intron | 35.0% | |
| GGACATCACACATTATCTTA+AGG | - | chr6.4:53879367-53879386 | MS.gene81845:CDS | 35.0% | |
| GTAATTATTCTGCTTCTGTG+AGG | - | chr6.4:53882721-53882740 | MS.gene81845:intron | 35.0% | |
| GTGCATGCCAGAATAAAAAA+TGG | - | chr6.4:53879346-53879365 | MS.gene81845:CDS | 35.0% | |
| GTGGTGATAAAAATAAGGAG+CGG | - | chr6.4:53882229-53882248 | MS.gene81845:intron | 35.0% | |
| TCCTATCTTTCGTAACCTAA+CGG | + | chr6.4:53880997-53881016 | None:intergenic | 35.0% | |
| TTAACAAGGAAGTTGAGTCT+GGG | + | chr6.4:53879480-53879499 | None:intergenic | 35.0% | |
| TTATAGTCAACTTAAGAGCG+TGG | - | chr6.4:53879150-53879169 | MS.gene81845:CDS | 35.0% | |
| TTGATATCAACTTCTAGTGG+GGG | + | chr6.4:53878779-53878798 | None:intergenic | 35.0% | |
| TTGTTAAAGTGAAGTTGTCG+TGG | - | chr6.4:53879026-53879045 | MS.gene81845:CDS | 35.0% | |
| TTGTTGGGCTACAGATTAAT+GGG | + | chr6.4:53879578-53879597 | None:intergenic | 35.0% | |
| TTTAACTGGAACTTACTCCA+TGG | - | chr6.4:53878939-53878958 | MS.gene81845:CDS | 35.0% | |
| TTTGGTCATCAAACACATGT+TGG | + | chr6.4:53879246-53879265 | None:intergenic | 35.0% | |
| TTTGTTGGGCTACAGATTAA+TGG | + | chr6.4:53879579-53879598 | None:intergenic | 35.0% | |
| ! | AAGATGAGTTCAACTAGCTT+AGG | - | chr6.4:53878680-53878699 | MS.gene81845:CDS | 35.0% |
| ! | AATAGATGTAGTCGGCTTTA+TGG | - | chr6.4:53880955-53880974 | MS.gene81845:CDS | 35.0% |
| ! | AATCAGTCAATTTAGGGCAT+CGG | + | chr6.4:53880141-53880160 | None:intergenic | 35.0% |
| ! | ACTTTGAGAAAGAGCATATG+TGG | - | chr6.4:53882550-53882569 | MS.gene81845:intron | 35.0% |
| ! | AGATGAGTTCAACTAGCTTA+GGG | - | chr6.4:53878681-53878700 | MS.gene81845:CDS | 35.0% |
| ! | ATCATCCGATTTTCCTTCAT+CGG | + | chr6.4:53882340-53882359 | None:intergenic | 35.0% |
| ! | CCAATACTGAATGATGGAAT+TGG | + | chr6.4:53882159-53882178 | None:intergenic | 35.0% |
| ! | CCATTTTAAACCTAGGTTTG+GGG | - | chr6.4:53880253-53880272 | MS.gene81845:intron | 35.0% |
| ! | CGATGGCCTTAACTTAAATA+AGG | + | chr6.4:53879281-53879300 | None:intergenic | 35.0% |
| ! | GTGTAGGAAGCAAATTTTGT+TGG | + | chr6.4:53879594-53879613 | None:intergenic | 35.0% |
| ! | TCACTCAAACCAACTTTTTG+TGG | - | chr6.4:53878710-53878729 | MS.gene81845:CDS | 35.0% |
| ! | TTTGTGGATTGTTGTTAGTC+TGG | - | chr6.4:53878726-53878745 | MS.gene81845:intron | 35.0% |
| !! | AAATAAAAGCATTAGTGGCC+CGG | - | chr6.4:53878832-53878851 | MS.gene81845:CDS | 35.0% |
| !! | ATGTTGCTGTTTGTTGAGTT+TGG | + | chr6.4:53879964-53879983 | None:intergenic | 35.0% |
| !! | CAGATTTTAGTGGTTATCCT+GGG | - | chr6.4:53880854-53880873 | MS.gene81845:intron | 35.0% |
| !! | TCAGATTTTAGTGGTTATCC+TGG | - | chr6.4:53880853-53880872 | MS.gene81845:intron | 35.0% |
| !! | TGGTTGGTTTATCATATCCA+AGG | - | chr6.4:53881204-53881223 | MS.gene81845:CDS | 35.0% |
| !!! | CTTCTGAATGATAGTGGTTT+TGG | - | chr6.4:53882462-53882481 | MS.gene81845:intron | 35.0% |
| !!! | CTTTTTTGAGCAAACCATTG+GGG | - | chr6.4:53878879-53878898 | MS.gene81845:CDS | 35.0% |
| !!! | TCTTTGTTTTCAGTTTTGGG+GGG | + | chr6.4:53879616-53879635 | None:intergenic | 35.0% |
| !!! | TTTTTTATTCTGGCATGCAC+GGG | + | chr6.4:53879346-53879365 | None:intergenic | 35.0% |
| AAAATCCACCGGAAATCCAT+CGG | - | chr6.4:53879685-53879704 | MS.gene81845:intron | 40.0% | |
| AAAGACTCCACAGCTGAAAA+TGG | + | chr6.4:53883117-53883136 | None:intergenic | 40.0% | |
| AAGACTCCACAGCTGAAAAT+GGG | + | chr6.4:53883116-53883135 | None:intergenic | 40.0% | |
| AAGGGAATGTCACACGATTA+AGG | - | chr6.4:53882202-53882221 | MS.gene81845:intron | 40.0% | |
| AAGTTCCAGTTAAACTCAGG+AGG | + | chr6.4:53878933-53878952 | None:intergenic | 40.0% | |
| AATGTCACACGATTAAGGAG+CGG | - | chr6.4:53882207-53882226 | MS.gene81845:intron | 40.0% | |
| ACCGTTAGGTTACGAAAGAT+AGG | - | chr6.4:53880993-53881012 | MS.gene81845:CDS | 40.0% | |
| ATGGAACAAGGAAAATGCCT+TGG | - | chr6.4:53879310-53879329 | MS.gene81845:CDS | 40.0% | |
| ATGTGAGCACCAGTTATATG+AGG | + | chr6.4:53882904-53882923 | None:intergenic | 40.0% | |
| ATTGGGCTTCTGAATGATAG+TGG | - | chr6.4:53882456-53882475 | MS.gene81845:intron | 40.0% | |
| CACATATTAGAAGATCCAGC+TGG | - | chr6.4:53882873-53882892 | MS.gene81845:intron | 40.0% | |
| CATATTAGAAGATCCAGCTG+GGG | - | chr6.4:53882875-53882894 | MS.gene81845:intron | 40.0% | |
| CATGCAGGTGAAAAAAACCA+GGG | - | chr6.4:53882125-53882144 | MS.gene81845:CDS | 40.0% | |
| CCACACTTTCTTTGTGGATT+GGG | - | chr6.4:53882518-53882537 | MS.gene81845:intron | 40.0% | |
| CCCCAAACCTAGGTTTAAAA+TGG | + | chr6.4:53880256-53880275 | None:intergenic | 40.0% | |
| CGTCATTTCTCAAAATCCAC+CGG | - | chr6.4:53879674-53879693 | MS.gene81845:intron | 40.0% | |
| GAAAAATACCTCAATCTGCC+GGG | + | chr6.4:53878853-53878872 | None:intergenic | 40.0% | |
| GAATGTGCTAGTGTCATATC+AGG | + | chr6.4:53879456-53879475 | None:intergenic | 40.0% | |
| GAGCGGTGGTGATAAAAATA+AGG | - | chr6.4:53882224-53882243 | MS.gene81845:intron | 40.0% | |
| GATCTTATGCGTTCAGTAGA+TGG | - | chr6.4:53882411-53882430 | MS.gene81845:intron | 40.0% | |
| GATTGATGCATATCTGCAAC+TGG | - | chr6.4:53882487-53882506 | MS.gene81845:intron | 40.0% | |
| GCACAAGATGAGTATACCTA+AGG | - | chr6.4:53882383-53882402 | MS.gene81845:intron | 40.0% | |
| GCTAGTTGCTTGAGATTCAT+AGG | + | chr6.4:53878752-53878771 | None:intergenic | 40.0% | |
| GGAGAGAATTCACTAGTGTA+AGG | - | chr6.4:53880779-53880798 | MS.gene81845:intron | 40.0% | |
| GTCAGTCCAATACTGAATGA+TGG | + | chr6.4:53882165-53882184 | None:intergenic | 40.0% | |
| TAGAAGGGAACATTGTATGC+TGG | - | chr6.4:53881602-53881621 | MS.gene81845:intron | 40.0% | |
| TCATGCAGGTGAAAAAAACC+AGG | - | chr6.4:53882124-53882143 | MS.gene81845:CDS | 40.0% | |
| TCCACACTTTCTTTGTGGAT+TGG | - | chr6.4:53882517-53882536 | MS.gene81845:intron | 40.0% | |
| TGAAAAAAACCAGGGACCTA+GGG | - | chr6.4:53882133-53882152 | MS.gene81845:CDS | 40.0% | |
| TGAGTTTGGATGGTGAATGA+CGG | + | chr6.4:53879950-53879969 | None:intergenic | 40.0% | |
| TGGAACAAGGAAAATGCCTT+GGG | - | chr6.4:53879311-53879330 | MS.gene81845:CDS | 40.0% | |
| TTCACTAGTGTAAGGATTGG+AGG | - | chr6.4:53880787-53880806 | MS.gene81845:intron | 40.0% | |
| TTGAATTCAAGCTCCAACAG+TGG | + | chr6.4:53880935-53880954 | None:intergenic | 40.0% | |
| TTTGTTGAATCTCCGGTGAT+TGG | - | chr6.4:53880377-53880396 | MS.gene81845:intron | 40.0% | |
| ! | AAAACCGGGTCAGATTTTAG+TGG | - | chr6.4:53880844-53880863 | MS.gene81845:intron | 40.0% |
| ! | ATGGTTTTCTGTGATCATGC+AGG | - | chr6.4:53882110-53882129 | MS.gene81845:CDS | 40.0% |
| ! | CACATTTTCTGTTTGTGCGA+GGG | + | chr6.4:53879401-53879420 | None:intergenic | 40.0% |
| ! | CAGTATTGGACTGACACAAT+CGG | - | chr6.4:53882170-53882189 | MS.gene81845:intron | 40.0% |
| ! | CATTTTCCTTGTTCCATTGC+AGG | + | chr6.4:53879307-53879326 | None:intergenic | 40.0% |
| ! | CTTCTGTTGATGAAGAACGA+CGG | + | chr6.4:53879769-53879788 | None:intergenic | 40.0% |
| ! | GACAAGAATTCAAACGGACT+TGG | + | chr6.4:53881021-53881040 | None:intergenic | 40.0% |
| ! | GGTAATGTTGATGAAGATGC+TGG | + | chr6.4:53879929-53879948 | None:intergenic | 40.0% |
| ! | TATCGAGAAACCAAAAGCGT+GGG | - | chr6.4:53882773-53882792 | MS.gene81845:intron | 40.0% |
| ! | TCACATTTTCTGTTTGTGCG+AGG | + | chr6.4:53879402-53879421 | None:intergenic | 40.0% |
| ! | TGCTGTTTGTTGAGTTTGGA+TGG | + | chr6.4:53879960-53879979 | None:intergenic | 40.0% |
| ! | TTTTGCAGTGAAGAGGCAAA+TGG | - | chr6.4:53880705-53880724 | MS.gene81845:intron | 40.0% |
| !! | TGTGATGGATAAAATTGGGG+TGG | - | chr6.4:53880580-53880599 | MS.gene81845:intron | 40.0% |
| !!! | CTGAATGATAGTGGTTTTGG+AGG | - | chr6.4:53882465-53882484 | MS.gene81845:intron | 40.0% |
| AACTGGTGCTCACATGTTCT+TGG | - | chr6.4:53882909-53882928 | MS.gene81845:intron | 45.0% | |
| AATGTGATGTTTGTGGGGTC+TGG | - | chr6.4:53879498-53879517 | MS.gene81845:CDS | 45.0% | |
| AATTCAAGCTCCAACAGTGG+TGG | + | chr6.4:53880932-53880951 | None:intergenic | 45.0% | |
| ACACTAAACCCACCAATCAC+CGG | + | chr6.4:53880392-53880411 | None:intergenic | 45.0% | |
| ACTAGTGTAAGGATTGGAGG+AGG | - | chr6.4:53880790-53880809 | MS.gene81845:intron | 45.0% | |
| AGGCAGCAATAAAGAGCTTG+AGG | - | chr6.4:53882679-53882698 | MS.gene81845:intron | 45.0% | |
| ATCCTTATGCAGGGTGCATA+AGG | + | chr6.4:53879544-53879563 | None:intergenic | 45.0% | |
| ATGCTGGTGTTTGAAGACGT+TGG | + | chr6.4:53879913-53879932 | None:intergenic | 45.0% | |
| ATGTTTGTGGGGTCTGGTTA+TGG | - | chr6.4:53879504-53879523 | MS.gene81845:CDS | 45.0% | |
| ATTGCTGAGGAATGATGTGG+AGG | - | chr6.4:53880750-53880769 | MS.gene81845:intron | 45.0% | |
| CCCAATCCACAAAGAAAGTG+TGG | + | chr6.4:53882521-53882540 | None:intergenic | 45.0% | |
| CGGAAATCAGACGAGACTAA+GGG | - | chr6.4:53882249-53882268 | MS.gene81845:intron | 45.0% | |
| CGTCGTTCTTCATCAACAGA+AGG | - | chr6.4:53879767-53879786 | MS.gene81845:intron | 45.0% | |
| CTACACCTCCTGAGTTTAAC+TGG | - | chr6.4:53878925-53878944 | MS.gene81845:CDS | 45.0% | |
| CTAGTGTAAGGATTGGAGGA+GGG | - | chr6.4:53880791-53880810 | MS.gene81845:intron | 45.0% | |
| CTATCGAGAAACCAAAAGCG+TGG | - | chr6.4:53882772-53882791 | MS.gene81845:intron | 45.0% | |
| CTGGCTACTGCAATGCAAAA+AGG | - | chr6.4:53879049-53879068 | MS.gene81845:CDS | 45.0% | |
| CTTCACTGCAAAACTCGTCT+CGG | + | chr6.4:53880698-53880717 | None:intergenic | 45.0% | |
| GAAGCACAAGATTCCGATGA+AGG | - | chr6.4:53882324-53882343 | MS.gene81845:intron | 45.0% | |
| GCTACTGCAATGCAAAAAGG+AGG | - | chr6.4:53879052-53879071 | MS.gene81845:CDS | 45.0% | |
| GGAATGATGTGGAGGATCTT+CGG | - | chr6.4:53880758-53880777 | MS.gene81845:intron | 45.0% | |
| GGAGGTTGCAAATCCATTAG+CGG | - | chr6.4:53882959-53882978 | MS.gene81845:intron | 45.0% | |
| GGCGATAAGACGAAAGAAGA+TGG | + | chr6.4:53879190-53879209 | None:intergenic | 45.0% | |
| GGTTATGCGTTTCCGCAAAA+CGG | - | chr6.4:53880320-53880339 | MS.gene81845:intron | 45.0% | |
| GTGAAAAAAACCAGGGACCT+AGG | - | chr6.4:53882132-53882151 | MS.gene81845:CDS | 45.0% | |
| TAAAGTGAAGTTGTCGTGGC+TGG | - | chr6.4:53879030-53879049 | MS.gene81845:CDS | 45.0% | |
| TAGGGTGTATGAGCTTCCAA+TGG | - | chr6.4:53882623-53882642 | MS.gene81845:intron | 45.0% | |
| TATTGGACTGACACAATCGG+AGG | - | chr6.4:53882173-53882192 | MS.gene81845:intron | 45.0% | |
| TGGATTGCTGAGGAATGATG+TGG | - | chr6.4:53880747-53880766 | MS.gene81845:intron | 45.0% | |
| TTATATGAGGATACCCCAGC+TGG | + | chr6.4:53882891-53882910 | None:intergenic | 45.0% | |
| TTATCCTGGGAAATCGACTG+AGG | - | chr6.4:53880867-53880886 | MS.gene81845:intron | 45.0% | |
| TTCCTTATGCACCCTGCATA+AGG | - | chr6.4:53879539-53879558 | MS.gene81845:CDS | 45.0% | |
| TTGAATCTCCGGTGATTGGT+GGG | - | chr6.4:53880381-53880400 | MS.gene81845:intron | 45.0% | |
| ! | AAACCAAAAGCGTGGGTGAA+GGG | - | chr6.4:53882780-53882799 | MS.gene81845:intron | 45.0% |
| ! | AGACGAGTTTTGCAGTGAAG+AGG | - | chr6.4:53880698-53880717 | MS.gene81845:intron | 45.0% |
| ! | CTGGGGTATCCTCATATAAC+TGG | - | chr6.4:53882892-53882911 | MS.gene81845:intron | 45.0% |
| ! | CTTTTGCCCTTAACCTCAGT+CGG | + | chr6.4:53880536-53880555 | None:intergenic | 45.0% |
| ! | GGTTGTTTCCGATGGATTTC+CGG | + | chr6.4:53879696-53879715 | None:intergenic | 45.0% |
| ! | TGAATGATGGAATTGGCCCT+AGG | + | chr6.4:53882152-53882171 | None:intergenic | 45.0% |
| ! | TTAAGGGCAAAAGCGCGTTT+GGG | - | chr6.4:53880543-53880562 | MS.gene81845:intron | 45.0% |
| !! | GAATGTCGGCGTTGATATAC+AGG | - | chr6.4:53878995-53879014 | MS.gene81845:CDS | 45.0% |
| !! | GAATTTTAGGTGGGGGGTTA+GGG | - | chr6.4:53880508-53880527 | MS.gene81845:intron | 45.0% |
| !! | GCTAATGGATTTGCAACCTC+CGG | + | chr6.4:53882960-53882979 | None:intergenic | 45.0% |
| !! | GTGATTGGTGGGTTTAGTGT+CGG | - | chr6.4:53880392-53880411 | MS.gene81845:intron | 45.0% |
| !! | TGAATTTTAGGTGGGGGGTT+AGG | - | chr6.4:53880507-53880526 | MS.gene81845:intron | 45.0% |
| !! | TGATTGGTGGGTTTAGTGTC+GGG | - | chr6.4:53880393-53880412 | MS.gene81845:intron | 45.0% |
| !!! | TTTTCAGTTTTGGGGGGTGT+AGG | + | chr6.4:53879610-53879629 | None:intergenic | 45.0% |
| !!! | TTTGTATAATTTTTAATTTT+TGG | + | chr6.4:53880231-53880250 | None:intergenic | 5.0% |
| AACATTTGCCAGCGGAGTGT+GGG | - | chr6.4:53880603-53880622 | MS.gene81845:intron | 50.0% | |
| AGAACGACGGCGATTGTTTC+CGG | + | chr6.4:53879756-53879775 | None:intergenic | 50.0% | |
| AGGAAGTGGAAGTCCGCTAA+TGG | + | chr6.4:53882975-53882994 | None:intergenic | 50.0% | |
| AGGACTAGGGTTCCGATTAG+GGG | - | chr6.4:53880473-53880492 | MS.gene81845:intron | 50.0% | |
| AGGGTTCCGACTGAGGTTAA+GGG | - | chr6.4:53880527-53880546 | MS.gene81845:intron | 50.0% | |
| GAAAGAAGGCCTGCAAACTC+CGG | - | chr6.4:53882938-53882957 | MS.gene81845:intron | 50.0% | |
| GACGTTGGTGTAGTGAACGA+CGG | + | chr6.4:53879898-53879917 | None:intergenic | 50.0% | |
| GAGGACTAGGGTTCCGATTA+GGG | - | chr6.4:53880472-53880491 | MS.gene81845:intron | 50.0% | |
| GAGGGTTCCGTTTCTTGTGA+TGG | - | chr6.4:53880565-53880584 | MS.gene81845:intron | 50.0% | |
| GCACGGGTATCTTATTCCCA+AGG | + | chr6.4:53879330-53879349 | None:intergenic | 50.0% | |
| GCAGTCAATTGCAGACCGTT+AGG | - | chr6.4:53880979-53880998 | MS.gene81845:CDS | 50.0% | |
| GCGGAAATCAGACGAGACTA+AGG | - | chr6.4:53882248-53882267 | MS.gene81845:intron | 50.0% | |
| GGGTCTGGTTATGGTGCATA+AGG | - | chr6.4:53879513-53879532 | MS.gene81845:CDS | 50.0% | |
| GGTGTATGAGCTTCCAATGG+CGG | - | chr6.4:53882626-53882645 | MS.gene81845:intron | 50.0% | |
| GTAGTGAACGACGGTGTTTC+CGG | + | chr6.4:53879824-53879843 | None:intergenic | 50.0% | |
| GTGTATGAGCTTCCAATGGC+GGG | - | chr6.4:53882627-53882646 | MS.gene81845:intron | 50.0% | |
| GTTGAATCTCCGGTGATTGG+TGG | - | chr6.4:53880380-53880399 | MS.gene81845:intron | 50.0% | |
| TAAGACACTGGGAACCCCAA+TGG | + | chr6.4:53878896-53878915 | None:intergenic | 50.0% | |
| TAGGGTTCCGACTGAGGTTA+AGG | - | chr6.4:53880526-53880545 | MS.gene81845:intron | 50.0% | |
| TATGCGTTTCCGCAAAACGG+TGG | - | chr6.4:53880323-53880342 | MS.gene81845:intron | 50.0% | |
| TCGTGACCTGCAATGGAACA+AGG | - | chr6.4:53879298-53879317 | MS.gene81845:CDS | 50.0% | |
| TGCAGTGAAGAGGCAAATGG+AGG | - | chr6.4:53880708-53880727 | MS.gene81845:intron | 50.0% | |
| TGCGAGCAAGGAATTGGAGA+AGG | - | chr6.4:53880894-53880913 | MS.gene81845:CDS | 50.0% | |
| TGGAGGAGGGAAAAGCTTTG+AGG | - | chr6.4:53880804-53880823 | MS.gene81845:intron | 50.0% | |
| TGTATGAGCTTCCAATGGCG+GGG | - | chr6.4:53882628-53882647 | MS.gene81845:intron | 50.0% | |
| TGTTCCATTGCAGGTCACGA+TGG | + | chr6.4:53879298-53879317 | None:intergenic | 50.0% | |
| TTAATCTGCTTCCCCGCCAT+TGG | + | chr6.4:53882642-53882661 | None:intergenic | 50.0% | |
| TTCTGTGAGGGTGACAGAGT+TGG | - | chr6.4:53882734-53882753 | MS.gene81845:intron | 50.0% | |
| ! | AGCGGACTTCCACTTCCTAA+TGG | - | chr6.4:53882977-53882996 | MS.gene81845:intron | 50.0% |
| ! | GAAACCAAAAGCGTGGGTGA+AGG | - | chr6.4:53882779-53882798 | MS.gene81845:intron | 50.0% |
| ! | GAGAAGCCCATTTTCAGCTG+TGG | - | chr6.4:53883107-53883126 | MS.gene81845:CDS | 50.0% |
| ! | GCTGTGGAGTCTTTTGCATG+AGG | - | chr6.4:53883123-53883142 | MS.gene81845:CDS | 50.0% |
| ! | GGAGGAGGGAAAAGCTTTGA+GGG | - | chr6.4:53880805-53880824 | MS.gene81845:intron | 50.0% |
| ! | GTTAAGGGCAAAAGCGCGTT+TGG | - | chr6.4:53880542-53880561 | MS.gene81845:intron | 50.0% |
| ! | TGTTTCCGATGGATTTCCGG+TGG | + | chr6.4:53879693-53879712 | None:intergenic | 50.0% |
| !! | AAAGGAAAGGTTGGTGCTGC+TGG | - | chr6.4:53880644-53880663 | MS.gene81845:intron | 50.0% |
| !! | AGGAATTGGAGAAGGCGTTG+AGG | - | chr6.4:53880902-53880921 | MS.gene81845:CDS | 50.0% |
| !! | CGATTGCAGGGTTGTTTTCG+GGG | - | chr6.4:53880435-53880454 | MS.gene81845:intron | 50.0% |
| !! | GAATTGGAGAAGGCGTTGAG+GGG | - | chr6.4:53880904-53880923 | MS.gene81845:CDS | 50.0% |
| !! | GAGGAGGGAAAAGCTTTGAG+GGG | - | chr6.4:53880806-53880825 | MS.gene81845:intron | 50.0% |
| !! | GCGATTGCAGGGTTGTTTTC+GGG | - | chr6.4:53880434-53880453 | MS.gene81845:intron | 50.0% |
| !! | GGAATTGGAGAAGGCGTTGA+GGG | - | chr6.4:53880903-53880922 | MS.gene81845:CDS | 50.0% |
| !! | GGCGATTGCAGGGTTGTTTT+CGG | - | chr6.4:53880433-53880452 | MS.gene81845:intron | 50.0% |
| !! | TGCCGCGGTGAATTTTAGGT+GGG | - | chr6.4:53880499-53880518 | MS.gene81845:intron | 50.0% |
| AAGGCCATCGTGACCTGCAA+TGG | - | chr6.4:53879291-53879310 | MS.gene81845:CDS | 55.0% | |
| ACACAATCGGAGGAGGAGCA+AGG | - | chr6.4:53882183-53882202 | MS.gene81845:intron | 55.0% | |
| ACATTTGCCAGCGGAGTGTG+GGG | - | chr6.4:53880604-53880623 | MS.gene81845:intron | 55.0% | |
| ATTAGTGGCCCGGCAGATTG+AGG | - | chr6.4:53878842-53878861 | MS.gene81845:CDS | 55.0% | |
| CACAATCGGAGGAGGAGCAA+GGG | - | chr6.4:53882184-53882203 | MS.gene81845:intron | 55.0% | |
| CCCCCACCTAAAATTCACCG+CGG | + | chr6.4:53880504-53880523 | None:intergenic | 55.0% | |
| CGAGGACTAGGGTTCCGATT+AGG | - | chr6.4:53880471-53880490 | MS.gene81845:intron | 55.0% | |
| CTCCACCACCGGAAATCCAT+CGG | - | chr6.4:53879715-53879734 | MS.gene81845:intron | 55.0% | |
| CTCGGCAACACAGCACTTGT+CGG | + | chr6.4:53880680-53880699 | None:intergenic | 55.0% | |
| GAACATTTGCCAGCGGAGTG+TGG | - | chr6.4:53880602-53880621 | MS.gene81845:intron | 55.0% | |
| GACGCTCGTGTAGTGAACGA+CGG | + | chr6.4:53879833-53879852 | None:intergenic | 55.0% | |
| GAGGCAAATGGAGGTTCTGC+AGG | - | chr6.4:53880717-53880736 | MS.gene81845:intron | 55.0% | |
| GCAAATGGAGGTTCTGCAGG+CGG | - | chr6.4:53880720-53880739 | MS.gene81845:intron | 55.0% | |
| GGCTGATGCGAGCAAGGAAT+TGG | - | chr6.4:53880888-53880907 | MS.gene81845:CDS | 55.0% | |
| GTCACACGATTAAGGAGCGG+TGG | - | chr6.4:53882210-53882229 | MS.gene81845:intron | 55.0% | |
| TCGGAAACAACCTCCACCAC+CGG | - | chr6.4:53879704-53879723 | MS.gene81845:intron | 55.0% | |
| TCGTCGTCTTCCTTCACCAC+CGG | - | chr6.4:53879802-53879821 | MS.gene81845:intron | 55.0% | |
| TGGACTGACACAATCGGAGG+AGG | - | chr6.4:53882176-53882195 | MS.gene81845:intron | 55.0% | |
| TGGGGTGGAACATTTGCCAG+CGG | - | chr6.4:53880595-53880614 | MS.gene81845:intron | 55.0% | |
| TTCAAATCCCCACACTCCGC+TGG | + | chr6.4:53880614-53880633 | None:intergenic | 55.0% | |
| TTGCAACCTCCGGAGTTTGC+AGG | + | chr6.4:53882950-53882969 | None:intergenic | 55.0% | |
| TTGGAAGTGAACGACGGCGT+TGG | + | chr6.4:53879873-53879892 | None:intergenic | 55.0% | |
| ! | ACGGCGTTGGAAGTGAACGA+CGG | + | chr6.4:53879860-53879879 | None:intergenic | 55.0% |
| ! | CCCAAAACGCCACCGTTTTG+CGG | + | chr6.4:53880335-53880354 | None:intergenic | 55.0% |
| ! | CCGCAAAACGGTGGCGTTTT+GGG | - | chr6.4:53880332-53880351 | MS.gene81845:intron | 55.0% |
| ! | CGCAAAACGGTGGCGTTTTG+GGG | - | chr6.4:53880333-53880352 | MS.gene81845:intron | 55.0% |
| ! | GACGTGCCGCGGTGAATTTT+AGG | - | chr6.4:53880495-53880514 | MS.gene81845:intron | 55.0% |
| ! | GTGCCGCGGTGAATTTTAGG+TGG | - | chr6.4:53880498-53880517 | MS.gene81845:intron | 55.0% |
| ! | GTGGTGGAGGTTGTTTCCGA+TGG | + | chr6.4:53879704-53879723 | None:intergenic | 55.0% |
| ! | TCAGCCTCAGTCGATTTCCC+AGG | + | chr6.4:53880874-53880893 | None:intergenic | 55.0% |
| ! | TCCGCAAAACGGTGGCGTTT+TGG | - | chr6.4:53880331-53880350 | MS.gene81845:intron | 55.0% |
| ! | TTCCGATGGATTTCCGGTGG+TGG | + | chr6.4:53879690-53879709 | None:intergenic | 55.0% |
| !! | AAGGTTGGTGCTGCTGGAGT+TGG | - | chr6.4:53880650-53880669 | MS.gene81845:intron | 55.0% |
| !! | AGGCGGAGAATGGATTGCTG+AGG | - | chr6.4:53880737-53880756 | MS.gene81845:intron | 55.0% |
| !! | AGGGTTGTTTTCGGGGACTG+AGG | - | chr6.4:53880442-53880461 | MS.gene81845:intron | 55.0% |
| !! | CCGCGGTGAATTTTAGGTGG+GGG | - | chr6.4:53880501-53880520 | MS.gene81845:intron | 55.0% |
| !! | CGCGGTGAATTTTAGGTGGG+GGG | - | chr6.4:53880502-53880521 | MS.gene81845:intron | 55.0% |
| !! | GCCGCGGTGAATTTTAGGTG+GGG | - | chr6.4:53880500-53880519 | MS.gene81845:intron | 55.0% |
| !! | GTTTTCGGGGACTGAGGTTG+CGG | - | chr6.4:53880448-53880467 | MS.gene81845:intron | 55.0% |
| !! | TGGTGGGTTTAGTGTCGGGA+AGG | - | chr6.4:53880397-53880416 | MS.gene81845:intron | 55.0% |
| ACGACGGCGATTGTTTCCGG+TGG | + | chr6.4:53879753-53879772 | None:intergenic | 60.0% | |
| ACGGCGATTGTTTCCGGTGG+TGG | + | chr6.4:53879750-53879769 | None:intergenic | 60.0% | |
| AGAAGGCCTGCAAACTCCGG+AGG | - | chr6.4:53882941-53882960 | MS.gene81845:intron | 60.0% | |
| GACGGTGTTTCCGGTGGTGA+AGG | + | chr6.4:53879815-53879834 | None:intergenic | 60.0% | |
| GACTGAGGCTGATGCGAGCA+AGG | - | chr6.4:53880882-53880901 | MS.gene81845:intron | 60.0% | |
| GAGGTTCTGCAGGCGGAGAA+TGG | - | chr6.4:53880727-53880746 | MS.gene81845:intron | 60.0% | |
| GGTGTAGTGAACGACGGCGT+TGG | + | chr6.4:53879892-53879911 | None:intergenic | 60.0% | |
| GTGAACGACGGTGTTTCCGG+TGG | + | chr6.4:53879821-53879840 | None:intergenic | 60.0% | |
| TGAGGTTGCGGCGAGGACTA+GGG | - | chr6.4:53880460-53880479 | MS.gene81845:intron | 60.0% | |
| TGGAATTGGCCCTAGGTCCC+TGG | + | chr6.4:53882145-53882164 | None:intergenic | 60.0% | |
| TTGAGGGGAGCCACCACTGT+TGG | - | chr6.4:53880919-53880938 | MS.gene81845:CDS | 60.0% | |
| ! | AGGGCAAAAGCGCGTTTGGG+AGG | - | chr6.4:53880546-53880565 | MS.gene81845:intron | 60.0% |
| ! | CGATGGATTTCCGGTGGTGG+AGG | + | chr6.4:53879717-53879736 | None:intergenic | 60.0% |
| ! | GCACCCTTCACCCACGCTTT+TGG | + | chr6.4:53882786-53882805 | None:intergenic | 60.0% |
| ! | GCGATTGTTTCCGGTGGTGG+AGG | + | chr6.4:53879747-53879766 | None:intergenic | 60.0% |
| ! | GGGCAAAAGCGCGTTTGGGA+GGG | - | chr6.4:53880547-53880566 | MS.gene81845:intron | 60.0% |
| !! | TAGTGTCGGGAAGGTGCCGT+CGG | - | chr6.4:53880406-53880425 | MS.gene81845:intron | 60.0% |
| ACCGCGGCACGTCCCCTAAT+CGG | + | chr6.4:53880488-53880507 | None:intergenic | 65.0% | |
| CTGAGGTTGCGGCGAGGACT+AGG | - | chr6.4:53880459-53880478 | MS.gene81845:intron | 65.0% | |
| GGGGGTTAGGGTTCCGACTG+AGG | - | chr6.4:53880520-53880539 | MS.gene81845:intron | 65.0% | |
| TCCGATTAGGGGACGTGCCG+CGG | - | chr6.4:53880484-53880503 | MS.gene81845:intron | 65.0% | |
| CCTGCAATCGCCCCAGCCGA+CGG | + | chr6.4:53880425-53880444 | None:intergenic | 70.0% | |
| ! | CGTCGGCTGGGGCGATTGCA+GGG | - | chr6.4:53880423-53880442 | MS.gene81845:intron | 70.0% |
| !! | TCGGGAAGGTGCCGTCGGCT+GGG | - | chr6.4:53880411-53880430 | MS.gene81845:intron | 70.0% |
| CGGGGACTGAGGTTGCGGCG+AGG | - | chr6.4:53880453-53880472 | MS.gene81845:intron | 75.0% | |
| ! | CCGTCGGCTGGGGCGATTGC+AGG | - | chr6.4:53880422-53880441 | MS.gene81845:intron | 75.0% |
| !! | CGGGAAGGTGCCGTCGGCTG+GGG | - | chr6.4:53880412-53880431 | MS.gene81845:intron | 75.0% |
| !! | GTCGGGAAGGTGCCGTCGGC+TGG | - | chr6.4:53880410-53880429 | MS.gene81845:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 53878677 | 53883143 | 53878677 | ID=MS.gene81845 |
| chr6.4 | mRNA | 53878677 | 53883143 | 53878677 | ID=MS.gene81845.t1;Parent=MS.gene81845 |
| chr6.4 | exon | 53883013 | 53883143 | 53883013 | ID=MS.gene81845.t1.exon1;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53883013 | 53883143 | 53883013 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| chr6.4 | exon | 53881821 | 53882185 | 53881821 | ID=MS.gene81845.t1.exon2;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53881821 | 53882185 | 53881821 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| chr6.4 | exon | 53881168 | 53881508 | 53881168 | ID=MS.gene81845.t1.exon3;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53881168 | 53881508 | 53881168 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| chr6.4 | exon | 53880884 | 53881081 | 53880884 | ID=MS.gene81845.t1.exon4;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53880884 | 53881081 | 53880884 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| chr6.4 | exon | 53878822 | 53879688 | 53878822 | ID=MS.gene81845.t1.exon5;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53878822 | 53879688 | 53878822 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| chr6.4 | exon | 53878677 | 53878739 | 53878677 | ID=MS.gene81845.t1.exon6;Parent=MS.gene81845.t1 |
| chr6.4 | CDS | 53878677 | 53878739 | 53878677 | ID=cds.MS.gene81845.t1;Parent=MS.gene81845.t1 |
| Gene Sequence |
| Protein sequence |
