Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81898.t1 | XP_003620399.1 | 75.1 | 639 | 25 | 2 | 1 | 505 | 1 | 639 | 2.20E-246 | 861.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81898.t1 | G7KMK4 | 75.1 | 639 | 25 | 2 | 1 | 505 | 1 | 639 | 1.6e-246 | 861.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05362 | MS.gene81898 | 0.850356 | 1.79E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81898.t1 | MTR_6g082400 | 95.833 | 384 | 16 | 0 | 1 | 384 | 1 | 384 | 0.0 | 659 |
MS.gene81898.t1 | MTR_6g082400 | 93.651 | 126 | 4 | 1 | 384 | 505 | 514 | 639 | 1.90e-67 | 229 |
MS.gene81898.t1 | MTR_8g106245 | 48.248 | 371 | 134 | 17 | 22 | 383 | 20 | 341 | 9.43e-79 | 257 |
MS.gene81898.t1 | MTR_8g106245 | 50.000 | 128 | 51 | 5 | 384 | 505 | 468 | 588 | 1.87e-18 | 89.0 |
MS.gene81898.t1 | MTR_1g109470 | 43.108 | 399 | 161 | 16 | 3 | 359 | 14 | 388 | 8.55e-73 | 245 |
MS.gene81898.t1 | MTR_4g091530 | 42.636 | 258 | 112 | 12 | 58 | 298 | 28 | 266 | 3.84e-40 | 150 |
MS.gene81898.t1 | MTR_2g461180 | 44.512 | 164 | 75 | 6 | 40 | 200 | 199 | 349 | 1.74e-29 | 123 |
MS.gene81898.t1 | MTR_2g010160 | 41.139 | 158 | 70 | 4 | 16 | 165 | 3 | 145 | 2.13e-29 | 120 |
MS.gene81898.t1 | MTR_4g092850 | 40.268 | 149 | 77 | 4 | 26 | 167 | 1 | 144 | 8.07e-26 | 110 |
MS.gene81898.t1 | MTR_4g116520 | 41.135 | 141 | 72 | 5 | 56 | 193 | 149 | 281 | 1.32e-25 | 111 |
MS.gene81898.t1 | MTR_6g033130 | 46.610 | 118 | 51 | 4 | 48 | 164 | 183 | 289 | 3.07e-24 | 107 |
MS.gene81898.t1 | MTR_6g033130 | 46.610 | 118 | 51 | 4 | 48 | 164 | 183 | 289 | 3.37e-24 | 107 |
MS.gene81898.t1 | MTR_1g090020 | 45.794 | 107 | 51 | 3 | 58 | 164 | 193 | 292 | 4.87e-22 | 100 |
MS.gene81898.t1 | MTR_5g067120 | 46.789 | 109 | 52 | 3 | 58 | 165 | 26 | 129 | 6.37e-22 | 97.8 |
MS.gene81898.t1 | MTR_2g005700 | 40.870 | 115 | 60 | 2 | 55 | 169 | 9 | 115 | 8.81e-22 | 96.7 |
MS.gene81898.t1 | MTR_5g032960 | 47.000 | 100 | 52 | 1 | 55 | 154 | 12 | 110 | 7.17e-20 | 89.0 |
MS.gene81898.t1 | MTR_8g442400 | 36.601 | 153 | 88 | 4 | 59 | 210 | 179 | 323 | 1.05e-19 | 93.6 |
MS.gene81898.t1 | MTR_4g128650 | 41.429 | 140 | 71 | 5 | 56 | 194 | 25 | 154 | 4.60e-19 | 91.3 |
MS.gene81898.t1 | MTR_5g488180 | 43.750 | 112 | 53 | 4 | 58 | 165 | 3 | 108 | 1.19e-18 | 85.1 |
MS.gene81898.t1 | MTR_5g088090 | 43.750 | 112 | 53 | 4 | 58 | 165 | 3 | 108 | 1.19e-18 | 85.1 |
MS.gene81898.t1 | MTR_5g088140 | 43.750 | 112 | 53 | 4 | 58 | 165 | 3 | 108 | 1.19e-18 | 85.1 |
MS.gene81898.t1 | MTR_5g067160 | 34.118 | 170 | 94 | 5 | 36 | 193 | 17 | 180 | 1.77e-18 | 87.8 |
MS.gene81898.t1 | MTR_5g088590 | 42.857 | 112 | 54 | 4 | 58 | 165 | 3 | 108 | 1.84e-18 | 85.1 |
MS.gene81898.t1 | MTR_5g088120 | 42.857 | 112 | 54 | 4 | 58 | 165 | 3 | 108 | 4.17e-18 | 83.2 |
MS.gene81898.t1 | MTR_5g488190 | 42.857 | 112 | 54 | 4 | 58 | 165 | 3 | 108 | 4.17e-18 | 83.2 |
MS.gene81898.t1 | MTR_3g077030 | 38.017 | 121 | 67 | 3 | 55 | 175 | 5 | 117 | 4.23e-18 | 83.2 |
MS.gene81898.t1 | MTR_5g088040 | 41.071 | 112 | 56 | 4 | 58 | 165 | 3 | 108 | 5.46e-17 | 80.5 |
MS.gene81898.t1 | MTR_4g105020 | 45.263 | 95 | 50 | 1 | 55 | 149 | 5 | 97 | 6.95e-17 | 79.0 |
MS.gene81898.t1 | MTR_5g088620 | 41.071 | 112 | 56 | 4 | 58 | 165 | 3 | 108 | 1.15e-16 | 79.3 |
MS.gene81898.t1 | MTR_5g488200 | 43.564 | 101 | 47 | 4 | 69 | 165 | 168 | 262 | 2.35e-13 | 72.0 |
MS.gene81898.t1 | MTR_5g067200 | 42.857 | 84 | 42 | 2 | 81 | 164 | 14 | 91 | 2.16e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81898.t1 | AT2G01190 | 45.052 | 384 | 158 | 10 | 18 | 363 | 33 | 401 | 7.24e-83 | 271 |
MS.gene81898.t1 | AT3G18230 | 50.142 | 351 | 147 | 10 | 54 | 383 | 59 | 402 | 1.11e-77 | 256 |
MS.gene81898.t1 | AT4G05150 | 42.667 | 150 | 62 | 5 | 58 | 193 | 58 | 197 | 1.01e-31 | 127 |
MS.gene81898.t1 | AT1G25300 | 52.778 | 108 | 42 | 2 | 58 | 165 | 10 | 108 | 1.93e-28 | 114 |
MS.gene81898.t1 | AT5G09620 | 49.565 | 115 | 51 | 2 | 58 | 169 | 39 | 149 | 3.35e-28 | 117 |
MS.gene81898.t1 | AT5G09620 | 49.565 | 115 | 51 | 2 | 58 | 169 | 39 | 149 | 4.05e-28 | 118 |
MS.gene81898.t1 | AT5G64430 | 43.836 | 146 | 70 | 3 | 58 | 199 | 44 | 181 | 6.97e-27 | 114 |
MS.gene81898.t1 | AT5G57610 | 43.478 | 138 | 70 | 4 | 58 | 194 | 23 | 153 | 5.19e-26 | 112 |
MS.gene81898.t1 | AT5G16220 | 36.723 | 177 | 74 | 3 | 57 | 198 | 29 | 202 | 2.60e-25 | 109 |
MS.gene81898.t1 | AT1G79570 | 35.583 | 163 | 92 | 3 | 58 | 214 | 176 | 331 | 5.72e-24 | 106 |
MS.gene81898.t1 | AT1G79570 | 35.583 | 163 | 92 | 3 | 58 | 214 | 176 | 331 | 1.03e-23 | 105 |
MS.gene81898.t1 | AT1G79570 | 35.583 | 163 | 92 | 3 | 58 | 214 | 176 | 331 | 1.03e-23 | 105 |
MS.gene81898.t1 | AT1G79570 | 35.583 | 163 | 92 | 3 | 58 | 214 | 176 | 331 | 1.18e-23 | 105 |
MS.gene81898.t1 | AT1G79570 | 35.583 | 163 | 92 | 3 | 58 | 214 | 176 | 331 | 1.18e-23 | 105 |
MS.gene81898.t1 | AT1G16270 | 35.366 | 164 | 93 | 3 | 57 | 214 | 163 | 319 | 1.50e-23 | 105 |
MS.gene81898.t1 | AT1G16270 | 35.366 | 164 | 93 | 3 | 57 | 214 | 163 | 319 | 1.50e-23 | 105 |
MS.gene81898.t1 | AT1G16270 | 35.366 | 164 | 93 | 3 | 57 | 214 | 163 | 319 | 1.50e-23 | 105 |
MS.gene81898.t1 | AT5G49920 | 38.926 | 149 | 78 | 3 | 58 | 206 | 9 | 144 | 2.25e-23 | 100 |
MS.gene81898.t1 | AT3G46920 | 37.500 | 160 | 90 | 4 | 58 | 214 | 74 | 226 | 2.45e-23 | 104 |
MS.gene81898.t1 | AT3G46920 | 37.500 | 160 | 90 | 4 | 58 | 214 | 8 | 160 | 2.53e-23 | 104 |
MS.gene81898.t1 | AT1G04700 | 44.882 | 127 | 59 | 3 | 38 | 164 | 105 | 220 | 5.21e-23 | 103 |
MS.gene81898.t1 | AT1G04700 | 44.882 | 127 | 59 | 3 | 38 | 164 | 105 | 220 | 5.21e-23 | 103 |
MS.gene81898.t1 | AT1G04700 | 44.882 | 127 | 59 | 3 | 38 | 164 | 105 | 220 | 5.76e-23 | 103 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.39e-21 | 92.8 |
MS.gene81898.t1 | AT2G35050 | 36.029 | 136 | 79 | 2 | 58 | 193 | 176 | 303 | 9.60e-21 | 96.7 |
MS.gene81898.t1 | AT2G35050 | 36.029 | 136 | 79 | 2 | 58 | 193 | 176 | 303 | 9.60e-21 | 96.7 |
MS.gene81898.t1 | AT3G48240 | 48.864 | 88 | 43 | 1 | 59 | 146 | 14 | 99 | 2.33e-19 | 86.3 |
MS.gene81898.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 8.82e-19 | 90.5 |
MS.gene81898.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 8.82e-19 | 90.5 |
MS.gene81898.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 8.82e-19 | 90.5 |
MS.gene81898.t1 | AT1G70640 | 47.253 | 91 | 47 | 1 | 59 | 149 | 8 | 97 | 6.23e-18 | 82.0 |
MS.gene81898.t1 | AT5G63130 | 46.809 | 94 | 48 | 1 | 56 | 149 | 12 | 103 | 7.63e-15 | 73.6 |
MS.gene81898.t1 | AT5G63130 | 46.809 | 94 | 48 | 1 | 56 | 149 | 12 | 103 | 7.63e-15 | 73.6 |
Find 115 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAGGGTTAGGTGCTTTATT+AGG | 0.180820 | 6.4:-55336144 | None:intergenic |
ACTTGAACAAATGTTGAATT+AGG | 0.181694 | 6.4:-55336162 | None:intergenic |
CGCGTGATCGTGGTGGCGGC+TGG | 0.231501 | 6.4:-55333886 | None:intergenic |
CTTTCGAGAACAATTCTTAA+TGG | 0.281376 | 6.4:+55334091 | MS.gene81898:CDS |
CCTCCTAGTGGTACTAATTA+TGG | 0.283273 | 6.4:+55336264 | MS.gene81898:CDS |
CTAGGAGGAGCTACATTAAT+AGG | 0.313944 | 6.4:-55336249 | None:intergenic |
GGTGCTTTATTAGGGTAAAT+TGG | 0.314952 | 6.4:-55336135 | None:intergenic |
GATAAATCTCTATGTTATTT+AGG | 0.318184 | 6.4:+55334007 | MS.gene81898:CDS |
AGCTTGCCTCCGGGGACATT+AGG | 0.320024 | 6.4:-55333938 | None:intergenic |
CTTGAACAAATGTTGAATTA+GGG | 0.329171 | 6.4:-55336161 | None:intergenic |
GCGATCCACGACCACGATTC+TGG | 0.330991 | 6.4:-55334038 | None:intergenic |
CGTGGTGGCGGCTGGGGTGG+TGG | 0.334133 | 6.4:-55333878 | None:intergenic |
TAGGGTTAGGTGCTTTATTA+GGG | 0.347270 | 6.4:-55336143 | None:intergenic |
GATGATGAGAGATCAGATTA+TGG | 0.354406 | 6.4:+55334817 | MS.gene81898:CDS |
CCATACCTTGTAACTGAATC+TGG | 0.358887 | 6.4:-55334922 | None:intergenic |
CCCATTGAAAGTGTGGTATC+TGG | 0.360704 | 6.4:-55334289 | None:intergenic |
AGGCCAATAATACCACAAAA+TGG | 0.366926 | 6.4:+55336105 | MS.gene81898:intron |
CATTATCTCCAGAAAATTGC+TGG | 0.372749 | 6.4:-55336413 | None:intergenic |
ACTTGAAAACAATAACAATA+AGG | 0.375409 | 6.4:+55334486 | MS.gene81898:CDS |
ATCTTCTTTGACTCCTTCAA+TGG | 0.377292 | 6.4:+55334585 | MS.gene81898:CDS |
ACAGCAAAATAATGCTCCTT+TGG | 0.379173 | 6.4:+55336332 | MS.gene81898:CDS |
ACCAGATACCACACTTTCAA+TGG | 0.385542 | 6.4:+55334288 | MS.gene81898:CDS |
GAAGCCATTGTTAATGTTGC+AGG | 0.394087 | 6.4:-55334739 | None:intergenic |
GCTTGCCTCCGGGGACATTA+GGG | 0.396519 | 6.4:-55333937 | None:intergenic |
ACAAATGTTGAATTAGGGTT+AGG | 0.399804 | 6.4:-55336156 | None:intergenic |
GCGTGATCGTGGTGGCGGCT+GGG | 0.402871 | 6.4:-55333885 | None:intergenic |
CGTGATCGTGGTGGCGGCTG+GGG | 0.405669 | 6.4:-55333884 | None:intergenic |
TGTTGTTGAAATTGATTTGA+AGG | 0.417721 | 6.4:-55336186 | None:intergenic |
CTGGGGTGGTGGCGATGATA+AGG | 0.417894 | 6.4:-55333867 | None:intergenic |
TTCTTCTGCTAATGTGGCTA+TGG | 0.422627 | 6.4:+55334708 | MS.gene81898:CDS |
CATGAGACGAAGCTTGCCTC+CGG | 0.429165 | 6.4:-55333948 | None:intergenic |
TCAGATTATGGAGGACTAAT+CGG | 0.430519 | 6.4:+55334829 | MS.gene81898:CDS |
TCATCGACGCGAACACGAAT+CGG | 0.433977 | 6.4:-55334619 | None:intergenic |
AGCTGGTACTTGAGAGTAAA+GGG | 0.442320 | 6.4:-55334118 | None:intergenic |
AATGCTGCAGCAGCAGCTGC+AGG | 0.444841 | 6.4:-55336378 | None:intergenic |
GTGGTGATGTGAATGTGAAT+AGG | 0.446979 | 6.4:+55334785 | MS.gene81898:CDS |
AGGAACGGTGGTCGCGGCAG+TGG | 0.448635 | 6.4:-55333804 | None:intergenic |
TGGTGATGTGAATGTGAATA+GGG | 0.453479 | 6.4:+55334786 | MS.gene81898:CDS |
CTTCAACAAGAGAACAAAGT+TGG | 0.453951 | 6.4:+55334658 | MS.gene81898:CDS |
GATCGTGGTGGCGGCTGGGG+TGG | 0.461863 | 6.4:-55333881 | None:intergenic |
CTTCACCAGATTCAGTTACA+AGG | 0.472765 | 6.4:+55334917 | MS.gene81898:CDS |
CATGAGGGCGCGGCATTATG+TGG | 0.483512 | 6.4:-55333985 | None:intergenic |
TGTTGTTTCTTCTGCTAATG+TGG | 0.488333 | 6.4:+55334702 | MS.gene81898:CDS |
GATAAGGACTCGATCGACTC+AGG | 0.496681 | 6.4:-55333851 | None:intergenic |
AATTATGGTTATGAATATAG+TGG | 0.496876 | 6.4:+55336279 | MS.gene81898:CDS |
CATCTGATGTTACTGTAATG+AGG | 0.497110 | 6.4:-55334162 | None:intergenic |
ATGAGACGAAGCTTGCCTCC+GGG | 0.501595 | 6.4:-55333947 | None:intergenic |
CCAGATACCACACTTTCAAT+GGG | 0.510170 | 6.4:+55334289 | MS.gene81898:CDS |
CTTCGTCTCATGTGCAGCTA+CGG | 0.512697 | 6.4:+55333959 | MS.gene81898:CDS |
TGACACCAGAATCGTGGTCG+TGG | 0.514574 | 6.4:+55334033 | MS.gene81898:CDS |
TCGATGAAAATGCTGGTAGC+AGG | 0.517305 | 6.4:+55334635 | MS.gene81898:CDS |
TTCTCGAAAGGCGCGAACAT+AGG | 0.519863 | 6.4:-55334078 | None:intergenic |
ACATTAACAATGGCTTCAGC+TGG | 0.524092 | 6.4:+55334745 | MS.gene81898:CDS |
CTCACACCACCACTAGTCCT+TGG | 0.525251 | 6.4:-55334889 | None:intergenic |
GGTGGCAAATTCTCCATTGA+AGG | 0.528503 | 6.4:-55334598 | None:intergenic |
AGAGGTGTGTCAGATTCAGC+AGG | 0.528641 | 6.4:+55334382 | MS.gene81898:CDS |
CATTAAGAATTGTTCTCGAA+AGG | 0.534712 | 6.4:-55334090 | None:intergenic |
TTGGATGATGTTAGGAGGAA+CGG | 0.538215 | 6.4:-55333819 | None:intergenic |
CAATTTCAACAACAATATGT+TGG | 0.538930 | 6.4:+55336195 | MS.gene81898:CDS |
CAAGATCTTCATGAGGAAGC+TGG | 0.541665 | 6.4:-55334135 | None:intergenic |
GTTAGGAGGAACGGTGGTCG+CGG | 0.543552 | 6.4:-55333810 | None:intergenic |
TTATTGCTTGAATCACTAGC+AGG | 0.547203 | 6.4:-55334433 | None:intergenic |
TAGTGATTCAAGCAATAACT+TGG | 0.550481 | 6.4:+55334438 | MS.gene81898:CDS |
GTTGATGCACTCAACAACTC+AGG | 0.551095 | 6.4:+55334349 | MS.gene81898:CDS |
TTAACGCGTGATCGTGGTGG+CGG | 0.551559 | 6.4:-55333890 | None:intergenic |
GTCAAATAGAACTTCACAGC+CGG | 0.552582 | 6.4:+55336443 | MS.gene81898:CDS |
GTTTCATTAACGCGTGATCG+TGG | 0.561214 | 6.4:-55333896 | None:intergenic |
AGCAGCAGCTGCAGGAGTCA+TGG | 0.562009 | 6.4:-55336370 | None:intergenic |
TTGATGCACTCAACAACTCA+GGG | 0.562066 | 6.4:+55334350 | MS.gene81898:CDS |
AAGCTGGTACTTGAGAGTAA+AGG | 0.565630 | 6.4:-55334119 | None:intergenic |
GCTTTATTAGGGTAAATTGG+TGG | 0.566463 | 6.4:-55336132 | None:intergenic |
ATGGAGGACTAATCGGATCT+CGG | 0.569138 | 6.4:+55334836 | MS.gene81898:CDS |
CTTGGTTGAACAAGCTGCAA+TGG | 0.570036 | 6.4:-55334871 | None:intergenic |
AATCTGAATCCGATTTATAC+CGG | 0.570252 | 6.4:-55336462 | None:intergenic |
TTGGAATGAAGCAAGATGGT+GGG | 0.571599 | 6.4:+55334677 | MS.gene81898:CDS |
TGTGGTTGATGATGAAATTG+AGG | 0.571680 | 6.4:-55336222 | None:intergenic |
TAACATAGAGATTTATCATG+AGG | 0.573619 | 6.4:-55334001 | None:intergenic |
GAATATAGTGGTAATGTGGA+AGG | 0.576884 | 6.4:+55336291 | MS.gene81898:CDS |
GACTCCTTCCCTAATGTCCC+CGG | 0.577267 | 6.4:+55333929 | MS.gene81898:CDS |
CTTGTAACTGAATCTGGTGA+AGG | 0.582351 | 6.4:-55334916 | None:intergenic |
CGTCTCATGTGCAGCTACGG+AGG | 0.586855 | 6.4:+55333962 | MS.gene81898:CDS |
CTTGTTCAACCAAGGACTAG+TGG | 0.587169 | 6.4:+55334880 | MS.gene81898:CDS |
ATTATCTCCAGAAAATTGCT+GGG | 0.594343 | 6.4:-55336412 | None:intergenic |
AAGTGATCCCATTGAAAGTG+TGG | 0.597227 | 6.4:-55334296 | None:intergenic |
TGAACAAGCTGCAATGGTAA+AGG | 0.597677 | 6.4:-55334865 | None:intergenic |
AACATAGAGATTTATCATGA+GGG | 0.600476 | 6.4:-55334000 | None:intergenic |
GTTCGCGTCGATGAAAATGC+TGG | 0.607616 | 6.4:+55334628 | MS.gene81898:CDS |
AGAGATTTATCATGAGGGCG+CGG | 0.611116 | 6.4:-55333995 | None:intergenic |
AAATCTCTATGTTATTTAGG+CGG | 0.616619 | 6.4:+55334010 | MS.gene81898:CDS |
ACAAGCTGCAATGGTAAAGG+TGG | 0.616722 | 6.4:-55334862 | None:intergenic |
GCTACATTAATAGGAACTTG+TGG | 0.617987 | 6.4:-55336240 | None:intergenic |
GCGGCAGTGGAGATAAGCGG+TGG | 0.619198 | 6.4:-55333791 | None:intergenic |
CATTGCAGCTTGTTCAACCA+AGG | 0.622441 | 6.4:+55334872 | MS.gene81898:CDS |
AACTCAGGGATTCTCTCAAG+AGG | 0.622550 | 6.4:+55334364 | MS.gene81898:CDS |
AATTCCTGCAACATTAACAA+TGG | 0.624548 | 6.4:+55334735 | MS.gene81898:CDS |
GCCTCCGGGGACATTAGGGA+AGG | 0.625405 | 6.4:-55333933 | None:intergenic |
GTTGGAATGAAGCAAGATGG+TGG | 0.626927 | 6.4:+55334676 | MS.gene81898:CDS |
AAAGTTGGAATGAAGCAAGA+TGG | 0.635123 | 6.4:+55334673 | MS.gene81898:CDS |
TCATTAACGCGTGATCGTGG+TGG | 0.637623 | 6.4:-55333893 | None:intergenic |
TTATGAATATAGTGGTAATG+TGG | 0.637729 | 6.4:+55336287 | MS.gene81898:CDS |
GTCGCGGCAGTGGAGATAAG+CGG | 0.656138 | 6.4:-55333794 | None:intergenic |
TGAGACGAAGCTTGCCTCCG+GGG | 0.658630 | 6.4:-55333946 | None:intergenic |
GATTGATATTGAGTAACCAA+AGG | 0.659965 | 6.4:-55336348 | None:intergenic |
ATGATGCAAAATCTGAGACA+TGG | 0.663147 | 6.4:+55334323 | MS.gene81898:CDS |
GGAGTTGTTACTGTTACTAG+TGG | 0.668781 | 6.4:+55334766 | MS.gene81898:CDS |
AGGCGGTGACACCAGAATCG+TGG | 0.669242 | 6.4:+55334027 | MS.gene81898:CDS |
TCGACGCGAACACGAATCGG+TGG | 0.670399 | 6.4:-55334616 | None:intergenic |
GATGAGAGATCAGATTATGG+AGG | 0.672016 | 6.4:+55334820 | MS.gene81898:CDS |
ATTAATGTAGCTCCTCCTAG+TGG | 0.674238 | 6.4:+55336252 | MS.gene81898:CDS |
GTTCAACCAAGGACTAGTGG+TGG | 0.681531 | 6.4:+55334883 | MS.gene81898:CDS |
CCATAATTAGTACCACTAGG+AGG | 0.694247 | 6.4:-55336264 | None:intergenic |
AGGTTATCAAGATCTTCATG+AGG | 0.698968 | 6.4:-55334142 | None:intergenic |
TAACCATAATTAGTACCACT+AGG | 0.707891 | 6.4:-55336267 | None:intergenic |
TCCTTCCCTAATGTCCCCGG+AGG | 0.714140 | 6.4:+55333932 | MS.gene81898:CDS |
GATGATGTTAGGAGGAACGG+TGG | 0.719830 | 6.4:-55333816 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATGGTTATGAATATAG+TGG | + | chr6.4:55336279-55336298 | MS.gene81898:CDS | 20.0% |
!! | ACTTGAAAACAATAACAATA+AGG | + | chr6.4:55334486-55334505 | MS.gene81898:CDS | 20.0% |
!! | AGAAAACAAATTATGTTAAG+TGG | + | chr6.4:55335065-55335084 | MS.gene81898:intron | 20.0% |
!! | GAAAACAAATTATGTTAAGT+GGG | + | chr6.4:55335066-55335085 | MS.gene81898:intron | 20.0% |
!! | TACTAACATATATGTATTTG+TGG | - | chr6.4:55335257-55335276 | None:intergenic | 20.0% |
!!! | GATAAATCTCTATGTTATTT+AGG | + | chr6.4:55334007-55334026 | MS.gene81898:CDS | 20.0% |
!!! | TTCTTGATGATAAATAATCT+TGG | - | chr6.4:55335755-55335774 | None:intergenic | 20.0% |
! | AACATAGAGATTTATCATGA+GGG | - | chr6.4:55334003-55334022 | None:intergenic | 25.0% |
! | AACTAATCTGACACTTATAT+TGG | - | chr6.4:55335176-55335195 | None:intergenic | 25.0% |
! | ACTTGAACAAATGTTGAATT+AGG | - | chr6.4:55336165-55336184 | None:intergenic | 25.0% |
! | ATGTTAAGTGGGATAAAATT+TGG | + | chr6.4:55335077-55335096 | MS.gene81898:intron | 25.0% |
! | CAATTTCAACAACAATATGT+TGG | + | chr6.4:55336195-55336214 | MS.gene81898:CDS | 25.0% |
! | CTTGAACAAATGTTGAATTA+GGG | - | chr6.4:55336164-55336183 | None:intergenic | 25.0% |
! | TAACATAGAGATTTATCATG+AGG | - | chr6.4:55334004-55334023 | None:intergenic | 25.0% |
! | TAATATAAATGACCCTAATG+TGG | + | chr6.4:55336071-55336090 | MS.gene81898:intron | 25.0% |
!! | AAATCTCTATGTTATTTAGG+CGG | + | chr6.4:55334010-55334029 | MS.gene81898:CDS | 25.0% |
!! | ACTTGGTAATATGATGAAAT+TGG | - | chr6.4:55335943-55335962 | None:intergenic | 25.0% |
!! | TTATGAATATAGTGGTAATG+TGG | + | chr6.4:55336287-55336306 | MS.gene81898:CDS | 25.0% |
!!! | TCACGAACTTTTCTAAAATT+AGG | + | chr6.4:55335120-55335139 | MS.gene81898:intron | 25.0% |
!!! | TGAAATTGGAATTTGATTTG+TGG | - | chr6.4:55335929-55335948 | None:intergenic | 25.0% |
!!! | TGTTGTTGAAATTGATTTGA+AGG | - | chr6.4:55336189-55336208 | None:intergenic | 25.0% |
AAAGAAGCAAGAAACAACTA+TGG | - | chr6.4:55334994-55335013 | None:intergenic | 30.0% | |
AACATGTAACTTGAATCTTG+AGG | - | chr6.4:55335808-55335827 | None:intergenic | 30.0% | |
AATTCCTGCAACATTAACAA+TGG | + | chr6.4:55334735-55334754 | MS.gene81898:CDS | 30.0% | |
ACAAATGTTGAATTAGGGTT+AGG | - | chr6.4:55336159-55336178 | None:intergenic | 30.0% | |
ACTGCTAATCTCAAAAACAT+AGG | - | chr6.4:55335586-55335605 | None:intergenic | 30.0% | |
ATAGTAGATCAGTAGAATGA+AGG | + | chr6.4:55335358-55335377 | MS.gene81898:intron | 30.0% | |
ATTATCTCCAGAAAATTGCT+GGG | - | chr6.4:55336415-55336434 | None:intergenic | 30.0% | |
CATTAAGAATTGTTCTCGAA+AGG | - | chr6.4:55334093-55334112 | None:intergenic | 30.0% | |
CTTTCGAGAACAATTCTTAA+TGG | + | chr6.4:55334091-55334110 | MS.gene81898:CDS | 30.0% | |
GATTGATATTGAGTAACCAA+AGG | - | chr6.4:55336351-55336370 | None:intergenic | 30.0% | |
TAACCATAATTAGTACCACT+AGG | - | chr6.4:55336270-55336289 | None:intergenic | 30.0% | |
TAGTGATTCAAGCAATAACT+TGG | + | chr6.4:55334438-55334457 | MS.gene81898:CDS | 30.0% | |
TATTAGAAGCTACCACATTA+GGG | - | chr6.4:55336086-55336105 | None:intergenic | 30.0% | |
TATTGGATACTGATATGTGT+CGG | - | chr6.4:55335159-55335178 | None:intergenic | 30.0% | |
TGAATTTGTGATTGTTGTGA+TGG | - | chr6.4:55335976-55335995 | None:intergenic | 30.0% | |
TGTTCTCTATATTTGTACCT+TGG | - | chr6.4:55335783-55335802 | None:intergenic | 30.0% | |
TGTTGCATTGTCATGTTATA+TGG | - | chr6.4:55336051-55336070 | None:intergenic | 30.0% | |
! | GTTCCATTTTGTGGTATTAT+TGG | - | chr6.4:55336111-55336130 | None:intergenic | 30.0% |
! | TGAACAAATTGTTGTTGTTG+TGG | - | chr6.4:55335874-55335893 | None:intergenic | 30.0% |
!! | GAATTTGATTTGTGGATGTA+GGG | - | chr6.4:55335921-55335940 | None:intergenic | 30.0% |
!! | GATAAACTGTTTTCTAGCAT+AGG | - | chr6.4:55334562-55334581 | None:intergenic | 30.0% |
!! | TTTTCTAGCATAGGTGAATT+AGG | - | chr6.4:55334553-55334572 | None:intergenic | 30.0% |
!!! | TAGTTTTGTTGGATGATGTT+AGG | - | chr6.4:55333830-55333849 | None:intergenic | 30.0% |
AAAGTTGGAATGAAGCAAGA+TGG | + | chr6.4:55334673-55334692 | MS.gene81898:CDS | 35.0% | |
ACAGCAAAATAATGCTCCTT+TGG | + | chr6.4:55336332-55336351 | MS.gene81898:CDS | 35.0% | |
ACATACACTGGATATTGTTG+TGG | - | chr6.4:55336003-55336022 | None:intergenic | 35.0% | |
AGGCCAATAATACCACAAAA+TGG | + | chr6.4:55336105-55336124 | MS.gene81898:intron | 35.0% | |
AGGTTATCAAGATCTTCATG+AGG | - | chr6.4:55334145-55334164 | None:intergenic | 35.0% | |
ATCTTCTTTGACTCCTTCAA+TGG | + | chr6.4:55334585-55334604 | MS.gene81898:CDS | 35.0% | |
ATTTGTGATTGTTGTGATGG+TGG | - | chr6.4:55335973-55335992 | None:intergenic | 35.0% | |
CATCTGATGTTACTGTAATG+AGG | - | chr6.4:55334165-55334184 | None:intergenic | 35.0% | |
CATTATCTCCAGAAAATTGC+TGG | - | chr6.4:55336416-55336435 | None:intergenic | 35.0% | |
CTAATGTGGTAGCTTCTAAT+AGG | + | chr6.4:55336085-55336104 | MS.gene81898:intron | 35.0% | |
CTATTAGAAGCTACCACATT+AGG | - | chr6.4:55336087-55336106 | None:intergenic | 35.0% | |
CTTCAACAAGAGAACAAAGT+TGG | + | chr6.4:55334658-55334677 | MS.gene81898:CDS | 35.0% | |
GATGATGAGAGATCAGATTA+TGG | + | chr6.4:55334817-55334836 | MS.gene81898:CDS | 35.0% | |
GCTACATTAATAGGAACTTG+TGG | - | chr6.4:55336243-55336262 | None:intergenic | 35.0% | |
TATCATCAAGAACAAGTCCA+AGG | + | chr6.4:55335763-55335782 | MS.gene81898:intron | 35.0% | |
TCAGATTATGGAGGACTAAT+CGG | + | chr6.4:55334829-55334848 | MS.gene81898:CDS | 35.0% | |
TGGTGTATATAGTGAGTGTT+GGG | - | chr6.4:55335898-55335917 | None:intergenic | 35.0% | |
TTATTGCTTGAATCACTAGC+AGG | - | chr6.4:55334436-55334455 | None:intergenic | 35.0% | |
! | ACAAATTGTTGTTGTTGTGG+TGG | - | chr6.4:55335871-55335890 | None:intergenic | 35.0% |
! | ATGATGCAAAATCTGAGACA+TGG | + | chr6.4:55334323-55334342 | MS.gene81898:CDS | 35.0% |
! | GAATATAGTGGTAATGTGGA+AGG | + | chr6.4:55336291-55336310 | MS.gene81898:CDS | 35.0% |
! | GCTTTATTAGGGTAAATTGG+TGG | - | chr6.4:55336135-55336154 | None:intergenic | 35.0% |
! | GGTGCTTTATTAGGGTAAAT+TGG | - | chr6.4:55336138-55336157 | None:intergenic | 35.0% |
! | GTGTAACATTGCTCTCTTTT+TGG | + | chr6.4:55334954-55334973 | MS.gene81898:intron | 35.0% |
! | TAGGGTTAGGTGCTTTATTA+GGG | - | chr6.4:55336146-55336165 | None:intergenic | 35.0% |
! | TGGTGATGTGAATGTGAATA+GGG | + | chr6.4:55334786-55334805 | MS.gene81898:CDS | 35.0% |
! | TTAGGGTTAGGTGCTTTATT+AGG | - | chr6.4:55336147-55336166 | None:intergenic | 35.0% |
! | TTTTGTTGGATGATGTTAGG+AGG | - | chr6.4:55333827-55333846 | None:intergenic | 35.0% |
!! | GGAATTTGATTTGTGGATGT+AGG | - | chr6.4:55335922-55335941 | None:intergenic | 35.0% |
!! | TGTGGTTGATGATGAAATTG+AGG | - | chr6.4:55336225-55336244 | None:intergenic | 35.0% |
!! | TGTTGATTTGGATCTGATTG+TGG | - | chr6.4:55335835-55335854 | None:intergenic | 35.0% |
!! | TGTTGTTTCTTCTGCTAATG+TGG | + | chr6.4:55334702-55334721 | MS.gene81898:CDS | 35.0% |
AAGCTGGTACTTGAGAGTAA+AGG | - | chr6.4:55334122-55334141 | None:intergenic | 40.0% | |
AAGTGATCCCATTGAAAGTG+TGG | - | chr6.4:55334299-55334318 | None:intergenic | 40.0% | |
ACACTGGATATTGTTGTGGA+TGG | - | chr6.4:55335999-55336018 | None:intergenic | 40.0% | |
ACATTAACAATGGCTTCAGC+TGG | + | chr6.4:55334745-55334764 | MS.gene81898:CDS | 40.0% | |
ACCAGATACCACACTTTCAA+TGG | + | chr6.4:55334288-55334307 | MS.gene81898:CDS | 40.0% | |
AGCTGGTACTTGAGAGTAAA+GGG | - | chr6.4:55334121-55334140 | None:intergenic | 40.0% | |
ATACTGATATGTGTCGGACA+TGG | - | chr6.4:55335153-55335172 | None:intergenic | 40.0% | |
ATCATGTTACGTCTCTCTGT+CGG | + | chr6.4:55335632-55335651 | MS.gene81898:intron | 40.0% | |
ATTAATGTAGCTCCTCCTAG+TGG | + | chr6.4:55336252-55336271 | MS.gene81898:CDS | 40.0% | |
CAGAGAGACGTAACATGATA+TGG | - | chr6.4:55335631-55335650 | None:intergenic | 40.0% | |
CCAATAGGCATTACATACAC+TGG | - | chr6.4:55336015-55336034 | None:intergenic | 40.0% | |
CCAGATACCACACTTTCAAT+GGG | + | chr6.4:55334289-55334308 | MS.gene81898:CDS | 40.0% | |
CCAGATTCAGTTACAAGGTA+TGG | + | chr6.4:55334922-55334941 | MS.gene81898:intron | 40.0% | |
CCAGTGTATGTAATGCCTAT+TGG | + | chr6.4:55336012-55336031 | MS.gene81898:intron | 40.0% | |
CCATAATTAGTACCACTAGG+AGG | - | chr6.4:55336267-55336286 | None:intergenic | 40.0% | |
CCATACCTTGTAACTGAATC+TGG | - | chr6.4:55334925-55334944 | None:intergenic | 40.0% | |
CCTCCTAGTGGTACTAATTA+TGG | + | chr6.4:55336264-55336283 | MS.gene81898:CDS | 40.0% | |
CTAGGAGGAGCTACATTAAT+AGG | - | chr6.4:55336252-55336271 | None:intergenic | 40.0% | |
CTTCACCAGATTCAGTTACA+AGG | + | chr6.4:55334917-55334936 | MS.gene81898:CDS | 40.0% | |
CTTGTAACTGAATCTGGTGA+AGG | - | chr6.4:55334919-55334938 | None:intergenic | 40.0% | |
GAAGCCATTGTTAATGTTGC+AGG | - | chr6.4:55334742-55334761 | None:intergenic | 40.0% | |
GATGAGAGATCAGATTATGG+AGG | + | chr6.4:55334820-55334839 | MS.gene81898:CDS | 40.0% | |
GGAGTTGTTACTGTTACTAG+TGG | + | chr6.4:55334766-55334785 | MS.gene81898:CDS | 40.0% | |
GGTGTGTCTAATGTCTATTG+TGG | - | chr6.4:55335236-55335255 | None:intergenic | 40.0% | |
GGTTGTTGTGTAGATCCAAT+AGG | - | chr6.4:55336030-55336049 | None:intergenic | 40.0% | |
GTCAAATAGAACTTCACAGC+CGG | + | chr6.4:55336443-55336462 | MS.gene81898:CDS | 40.0% | |
GTGGTGTATATAGTGAGTGT+TGG | - | chr6.4:55335899-55335918 | None:intergenic | 40.0% | |
TGAACAAGCTGCAATGGTAA+AGG | - | chr6.4:55334868-55334887 | None:intergenic | 40.0% | |
TTCTTCTGCTAATGTGGCTA+TGG | + | chr6.4:55334708-55334727 | MS.gene81898:CDS | 40.0% | |
TTGATGCACTCAACAACTCA+GGG | + | chr6.4:55334350-55334369 | MS.gene81898:CDS | 40.0% | |
TTGGAATGAAGCAAGATGGT+GGG | + | chr6.4:55334677-55334696 | MS.gene81898:CDS | 40.0% | |
TTGGATGATGTTAGGAGGAA+CGG | - | chr6.4:55333822-55333841 | None:intergenic | 40.0% | |
! | AATTGTTGTTGTTGTGGTGG+TGG | - | chr6.4:55335868-55335887 | None:intergenic | 40.0% |
! | ATTGGTGGAGTTCCATTTTG+TGG | - | chr6.4:55336120-55336139 | None:intergenic | 40.0% |
! | GGTTGTTGGAGTTGTTGATT+TGG | - | chr6.4:55335847-55335866 | None:intergenic | 40.0% |
! | GTGGTGATGTGAATGTGAAT+AGG | + | chr6.4:55334785-55334804 | MS.gene81898:CDS | 40.0% |
! | TGATTTGGATCTGATTGTGG+TGG | - | chr6.4:55335832-55335851 | None:intergenic | 40.0% |
!! | TTTGATTTGTGGATGTAGGG+TGG | - | chr6.4:55335918-55335937 | None:intergenic | 40.0% |
!!! | TCGACTCAGGATAGTTTTGT+TGG | - | chr6.4:55333841-55333860 | None:intergenic | 40.0% |
AACTCAGGGATTCTCTCAAG+AGG | + | chr6.4:55334364-55334383 | MS.gene81898:CDS | 45.0% | |
ACAAGCTGCAATGGTAAAGG+TGG | - | chr6.4:55334865-55334884 | None:intergenic | 45.0% | |
AGAGATTTATCATGAGGGCG+CGG | - | chr6.4:55333998-55334017 | None:intergenic | 45.0% | |
ATGGAGGACTAATCGGATCT+CGG | + | chr6.4:55334836-55334855 | MS.gene81898:CDS | 45.0% | |
CAAGATCTTCATGAGGAAGC+TGG | - | chr6.4:55334138-55334157 | None:intergenic | 45.0% | |
CTTGGTTGAACAAGCTGCAA+TGG | - | chr6.4:55334874-55334893 | None:intergenic | 45.0% | |
CTTGTTCAACCAAGGACTAG+TGG | + | chr6.4:55334880-55334899 | MS.gene81898:CDS | 45.0% | |
GGTGGCAAATTCTCCATTGA+AGG | - | chr6.4:55334601-55334620 | None:intergenic | 45.0% | |
GTTGATGCACTCAACAACTC+AGG | + | chr6.4:55334349-55334368 | MS.gene81898:CDS | 45.0% | |
GTTGGAATGAAGCAAGATGG+TGG | + | chr6.4:55334676-55334695 | MS.gene81898:CDS | 45.0% | |
GTTTCATTAACGCGTGATCG+TGG | - | chr6.4:55333899-55333918 | None:intergenic | 45.0% | |
TCGATGAAAATGCTGGTAGC+AGG | + | chr6.4:55334635-55334654 | MS.gene81898:CDS | 45.0% | |
! | CATTGCAGCTTGTTCAACCA+AGG | + | chr6.4:55334872-55334891 | MS.gene81898:CDS | 45.0% |
! | CCCATTGAAAGTGTGGTATC+TGG | - | chr6.4:55334292-55334311 | None:intergenic | 45.0% |
! | GATGCTTCCCAGCAATTTTC+TGG | + | chr6.4:55336405-55336424 | MS.gene81898:CDS | 45.0% |
!! | GTGATTGTTGTGATGGTGGA+GGG | - | chr6.4:55335969-55335988 | None:intergenic | 45.0% |
!! | TGTGATTGTTGTGATGGTGG+AGG | - | chr6.4:55335970-55335989 | None:intergenic | 45.0% |
!!! | TAAAAAATAAAAGTATAAAA+TGG | - | chr6.4:55335339-55335358 | None:intergenic | 5.0% |
CTTCGTCTCATGTGCAGCTA+CGG | + | chr6.4:55333959-55333978 | MS.gene81898:CDS | 50.0% | |
GATGATGTTAGGAGGAACGG+TGG | - | chr6.4:55333819-55333838 | None:intergenic | 50.0% | |
TCATCGACGCGAACACGAAT+CGG | - | chr6.4:55334622-55334641 | None:intergenic | 50.0% | |
TCATTAACGCGTGATCGTGG+TGG | - | chr6.4:55333896-55333915 | None:intergenic | 50.0% | |
! | AGAGGTGTGTCAGATTCAGC+AGG | + | chr6.4:55334382-55334401 | MS.gene81898:CDS | 50.0% |
! | GATAAGGACTCGATCGACTC+AGG | - | chr6.4:55333854-55333873 | None:intergenic | 50.0% |
! | GTTCAACCAAGGACTAGTGG+TGG | + | chr6.4:55334883-55334902 | MS.gene81898:CDS | 50.0% |
! | GTTCGCGTCGATGAAAATGC+TGG | + | chr6.4:55334628-55334647 | MS.gene81898:CDS | 50.0% |
! | TTCTCGAAAGGCGCGAACAT+AGG | - | chr6.4:55334081-55334100 | None:intergenic | 50.0% |
!! | GTGATGGTGGAGGGTAAACT+TGG | - | chr6.4:55335960-55335979 | None:intergenic | 50.0% |
!! | GTTGTTGTGGTGGTGGTTGT+TGG | - | chr6.4:55335861-55335880 | None:intergenic | 50.0% |
ATGAGACGAAGCTTGCCTCC+GGG | - | chr6.4:55333950-55333969 | None:intergenic | 55.0% | |
CATGAGACGAAGCTTGCCTC+CGG | - | chr6.4:55333951-55333970 | None:intergenic | 55.0% | |
CTCACACCACCACTAGTCCT+TGG | - | chr6.4:55334892-55334911 | None:intergenic | 55.0% | |
GACTCCTTCCCTAATGTCCC+CGG | + | chr6.4:55333929-55333948 | MS.gene81898:CDS | 55.0% | |
TGACACCAGAATCGTGGTCG+TGG | + | chr6.4:55334033-55334052 | MS.gene81898:CDS | 55.0% | |
TTAACGCGTGATCGTGGTGG+CGG | - | chr6.4:55333893-55333912 | None:intergenic | 55.0% | |
AATGCTGCAGCAGCAGCTGC+AGG | - | chr6.4:55336381-55336400 | None:intergenic | 60.0% | |
AGCAGCAGCTGCAGGAGTCA+TGG | - | chr6.4:55336373-55336392 | None:intergenic | 60.0% | |
AGCTTGCCTCCGGGGACATT+AGG | - | chr6.4:55333941-55333960 | None:intergenic | 60.0% | |
AGGCGGTGACACCAGAATCG+TGG | + | chr6.4:55334027-55334046 | MS.gene81898:CDS | 60.0% | |
CGTCTCATGTGCAGCTACGG+AGG | + | chr6.4:55333962-55333981 | MS.gene81898:CDS | 60.0% | |
GCGATCCACGACCACGATTC+TGG | - | chr6.4:55334041-55334060 | None:intergenic | 60.0% | |
GCTTGCCTCCGGGGACATTA+GGG | - | chr6.4:55333940-55333959 | None:intergenic | 60.0% | |
GTCGCGGCAGTGGAGATAAG+CGG | - | chr6.4:55333797-55333816 | None:intergenic | 60.0% | |
GTTAGGAGGAACGGTGGTCG+CGG | - | chr6.4:55333813-55333832 | None:intergenic | 60.0% | |
TCCTTCCCTAATGTCCCCGG+AGG | + | chr6.4:55333932-55333951 | MS.gene81898:CDS | 60.0% | |
TCGACGCGAACACGAATCGG+TGG | - | chr6.4:55334619-55334638 | None:intergenic | 60.0% | |
TGAGACGAAGCTTGCCTCCG+GGG | - | chr6.4:55333949-55333968 | None:intergenic | 60.0% | |
! | CATGAGGGCGCGGCATTATG+TGG | - | chr6.4:55333988-55334007 | None:intergenic | 60.0% |
! | CTGGGGTGGTGGCGATGATA+AGG | - | chr6.4:55333870-55333889 | None:intergenic | 60.0% |
GCCTCCGGGGACATTAGGGA+AGG | - | chr6.4:55333936-55333955 | None:intergenic | 65.0% | |
GCGGCAGTGGAGATAAGCGG+TGG | - | chr6.4:55333794-55333813 | None:intergenic | 65.0% | |
AGGAACGGTGGTCGCGGCAG+TGG | - | chr6.4:55333807-55333826 | None:intergenic | 70.0% | |
!! | CGTGATCGTGGTGGCGGCTG+GGG | - | chr6.4:55333887-55333906 | None:intergenic | 70.0% |
!! | GCGTGATCGTGGTGGCGGCT+GGG | - | chr6.4:55333888-55333907 | None:intergenic | 70.0% |
!! | CGCGTGATCGTGGTGGCGGC+TGG | - | chr6.4:55333889-55333908 | None:intergenic | 75.0% |
!! | GATCGTGGTGGCGGCTGGGG+TGG | - | chr6.4:55333884-55333903 | None:intergenic | 75.0% |
!!! | CGTGGTGGCGGCTGGGGTGG+TGG | - | chr6.4:55333881-55333900 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 55333785 | 55336470 | 55333785 | ID=MS.gene81898 |
chr6.4 | mRNA | 55333785 | 55336470 | 55333785 | ID=MS.gene81898.t1;Parent=MS.gene81898 |
chr6.4 | exon | 55333785 | 55334938 | 55333785 | ID=MS.gene81898.t1.exon1;Parent=MS.gene81898.t1 |
chr6.4 | CDS | 55333785 | 55334938 | 55333785 | ID=cds.MS.gene81898.t1;Parent=MS.gene81898.t1 |
chr6.4 | exon | 55336107 | 55336470 | 55336107 | ID=MS.gene81898.t1.exon2;Parent=MS.gene81898.t1 |
chr6.4 | CDS | 55336107 | 55336470 | 55336107 | ID=cds.MS.gene81898.t1;Parent=MS.gene81898.t1 |
Gene Sequence |
Protein sequence |