Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05362.t1 | XP_003620399.1 | 71 | 638 | 19 | 2 | 1 | 472 | 1 | 638 | 8.80E-224 | 786.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05362.t1 | G7KMK4 | 71.0 | 638 | 19 | 2 | 1 | 472 | 1 | 638 | 6.4e-224 | 786.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05362 | MS.gene056678 | 0.800409 | 1.46E-48 | -1.69E-46 |
MS.gene05362 | MS.gene60016 | 0.840958 | 6.35E-58 | -1.69E-46 |
MS.gene05362 | MS.gene70576 | 0.816235 | 6.14E-52 | -1.69E-46 |
MS.gene05362 | MS.gene71379 | 0.800585 | 1.34E-48 | -1.69E-46 |
MS.gene05362 | MS.gene73995 | 0.803092 | 4.11E-49 | -1.69E-46 |
MS.gene05362 | MS.gene81898 | 0.850356 | 1.79E-60 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05362.t1 | MTR_6g082400 | 94.686 | 414 | 15 | 2 | 1 | 411 | 1 | 410 | 0.0 | 691 |
MS.gene05362.t1 | MTR_6g082400 | 87.342 | 79 | 7 | 1 | 397 | 472 | 560 | 638 | 8.14e-31 | 126 |
MS.gene05362.t1 | MTR_8g106245 | 48.387 | 372 | 139 | 16 | 22 | 385 | 20 | 346 | 3.21e-80 | 261 |
MS.gene05362.t1 | MTR_1g109470 | 42.929 | 396 | 163 | 16 | 3 | 356 | 14 | 388 | 1.03e-72 | 244 |
MS.gene05362.t1 | MTR_4g091530 | 42.636 | 258 | 112 | 11 | 58 | 298 | 28 | 266 | 9.70e-43 | 157 |
MS.gene05362.t1 | MTR_2g461180 | 44.509 | 173 | 73 | 7 | 38 | 200 | 190 | 349 | 3.30e-30 | 125 |
MS.gene05362.t1 | MTR_2g010160 | 50.000 | 108 | 49 | 2 | 58 | 165 | 43 | 145 | 1.54e-28 | 118 |
MS.gene05362.t1 | MTR_4g116520 | 38.372 | 172 | 87 | 7 | 42 | 206 | 139 | 298 | 8.59e-27 | 115 |
MS.gene05362.t1 | MTR_4g092850 | 48.214 | 112 | 51 | 4 | 58 | 167 | 38 | 144 | 4.11e-26 | 110 |
MS.gene05362.t1 | MTR_6g033130 | 43.571 | 140 | 61 | 5 | 31 | 164 | 162 | 289 | 1.10e-24 | 108 |
MS.gene05362.t1 | MTR_6g033130 | 44.697 | 132 | 55 | 5 | 39 | 164 | 170 | 289 | 1.45e-24 | 108 |
MS.gene05362.t1 | MTR_2g005700 | 40.476 | 126 | 63 | 3 | 44 | 169 | 2 | 115 | 2.56e-22 | 98.2 |
MS.gene05362.t1 | MTR_1g090020 | 46.729 | 107 | 50 | 3 | 58 | 164 | 193 | 292 | 2.97e-22 | 101 |
MS.gene05362.t1 | MTR_5g067120 | 46.789 | 109 | 52 | 3 | 58 | 165 | 26 | 129 | 8.09e-22 | 97.4 |
MS.gene05362.t1 | MTR_8g442400 | 42.056 | 107 | 55 | 2 | 59 | 165 | 179 | 278 | 5.77e-20 | 94.4 |
MS.gene05362.t1 | MTR_5g488180 | 45.536 | 112 | 51 | 5 | 58 | 165 | 3 | 108 | 1.83e-19 | 87.4 |
MS.gene05362.t1 | MTR_5g088090 | 45.536 | 112 | 51 | 5 | 58 | 165 | 3 | 108 | 1.83e-19 | 87.4 |
MS.gene05362.t1 | MTR_5g088140 | 45.536 | 112 | 51 | 5 | 58 | 165 | 3 | 108 | 1.83e-19 | 87.4 |
MS.gene05362.t1 | MTR_4g128650 | 42.446 | 139 | 69 | 5 | 56 | 193 | 25 | 153 | 2.37e-19 | 92.0 |
MS.gene05362.t1 | MTR_5g032960 | 46.000 | 100 | 53 | 1 | 55 | 154 | 12 | 110 | 2.54e-19 | 87.0 |
MS.gene05362.t1 | MTR_5g088590 | 44.643 | 112 | 52 | 5 | 58 | 165 | 3 | 108 | 3.51e-19 | 87.0 |
MS.gene05362.t1 | MTR_5g088120 | 44.643 | 112 | 52 | 5 | 58 | 165 | 3 | 108 | 7.14e-19 | 85.1 |
MS.gene05362.t1 | MTR_5g488190 | 44.643 | 112 | 52 | 5 | 58 | 165 | 3 | 108 | 7.14e-19 | 85.1 |
MS.gene05362.t1 | MTR_5g067160 | 39.189 | 148 | 73 | 6 | 56 | 193 | 40 | 180 | 1.28e-18 | 88.2 |
MS.gene05362.t1 | MTR_3g077030 | 40.496 | 121 | 64 | 3 | 55 | 175 | 5 | 117 | 4.94e-18 | 82.8 |
MS.gene05362.t1 | MTR_5g088040 | 42.857 | 112 | 54 | 5 | 58 | 165 | 3 | 108 | 7.49e-18 | 82.8 |
MS.gene05362.t1 | MTR_5g088620 | 42.857 | 112 | 54 | 5 | 58 | 165 | 3 | 108 | 1.45e-17 | 82.0 |
MS.gene05362.t1 | MTR_4g105020 | 43.810 | 105 | 55 | 2 | 55 | 159 | 5 | 105 | 3.31e-17 | 79.7 |
MS.gene05362.t1 | MTR_5g488200 | 45.545 | 101 | 45 | 5 | 69 | 165 | 168 | 262 | 4.50e-14 | 73.9 |
MS.gene05362.t1 | MTR_5g067200 | 43.529 | 85 | 42 | 2 | 81 | 165 | 14 | 92 | 1.21e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05362.t1 | AT3G18230 | 49.741 | 386 | 146 | 14 | 54 | 407 | 59 | 428 | 9.96e-86 | 277 |
MS.gene05362.t1 | AT2G01190 | 45.000 | 380 | 161 | 9 | 18 | 360 | 33 | 401 | 1.70e-82 | 270 |
MS.gene05362.t1 | AT4G05150 | 44.000 | 150 | 60 | 5 | 58 | 193 | 58 | 197 | 5.44e-33 | 131 |
MS.gene05362.t1 | AT5G09620 | 41.071 | 168 | 69 | 4 | 58 | 222 | 39 | 179 | 7.08e-29 | 119 |
MS.gene05362.t1 | AT5G09620 | 41.071 | 168 | 69 | 4 | 58 | 222 | 39 | 179 | 8.18e-29 | 119 |
MS.gene05362.t1 | AT1G25300 | 52.778 | 108 | 42 | 2 | 58 | 165 | 10 | 108 | 9.40e-29 | 115 |
MS.gene05362.t1 | AT5G64430 | 45.890 | 146 | 67 | 4 | 58 | 199 | 44 | 181 | 3.43e-27 | 114 |
MS.gene05362.t1 | AT5G57610 | 44.203 | 138 | 69 | 4 | 58 | 194 | 23 | 153 | 4.86e-26 | 112 |
MS.gene05362.t1 | AT5G16220 | 37.288 | 177 | 73 | 3 | 57 | 198 | 29 | 202 | 7.16e-26 | 110 |
MS.gene05362.t1 | AT1G79570 | 36.905 | 168 | 90 | 4 | 58 | 225 | 176 | 327 | 5.99e-24 | 106 |
MS.gene05362.t1 | AT1G79570 | 36.905 | 168 | 90 | 4 | 58 | 225 | 176 | 327 | 9.28e-24 | 105 |
MS.gene05362.t1 | AT1G79570 | 36.905 | 168 | 90 | 4 | 58 | 225 | 176 | 327 | 9.28e-24 | 105 |
MS.gene05362.t1 | AT1G79570 | 36.905 | 168 | 90 | 4 | 58 | 225 | 176 | 327 | 9.35e-24 | 105 |
MS.gene05362.t1 | AT1G79570 | 36.905 | 168 | 90 | 4 | 58 | 225 | 176 | 327 | 9.35e-24 | 105 |
MS.gene05362.t1 | AT3G46920 | 46.296 | 108 | 53 | 2 | 58 | 165 | 74 | 176 | 1.06e-23 | 105 |
MS.gene05362.t1 | AT3G46920 | 46.296 | 108 | 53 | 2 | 58 | 165 | 8 | 110 | 1.14e-23 | 105 |
MS.gene05362.t1 | AT5G49920 | 40.426 | 141 | 71 | 3 | 58 | 198 | 9 | 136 | 1.87e-23 | 100 |
MS.gene05362.t1 | AT1G16270 | 35.976 | 164 | 92 | 3 | 57 | 214 | 163 | 319 | 7.20e-23 | 103 |
MS.gene05362.t1 | AT1G16270 | 35.976 | 164 | 92 | 3 | 57 | 214 | 163 | 319 | 7.20e-23 | 103 |
MS.gene05362.t1 | AT1G16270 | 35.976 | 164 | 92 | 3 | 57 | 214 | 163 | 319 | 7.20e-23 | 103 |
MS.gene05362.t1 | AT1G04700 | 44.094 | 127 | 60 | 3 | 38 | 164 | 105 | 220 | 9.35e-23 | 102 |
MS.gene05362.t1 | AT1G04700 | 44.094 | 127 | 60 | 3 | 38 | 164 | 105 | 220 | 9.35e-23 | 102 |
MS.gene05362.t1 | AT1G04700 | 44.094 | 127 | 60 | 3 | 38 | 164 | 105 | 220 | 1.01e-22 | 102 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT3G26510 | 46.789 | 109 | 49 | 3 | 59 | 164 | 10 | 112 | 1.38e-21 | 92.8 |
MS.gene05362.t1 | AT2G35050 | 43.519 | 108 | 53 | 3 | 58 | 165 | 176 | 275 | 1.83e-21 | 99.0 |
MS.gene05362.t1 | AT2G35050 | 43.519 | 108 | 53 | 3 | 58 | 165 | 176 | 275 | 1.83e-21 | 99.0 |
MS.gene05362.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 1.24e-19 | 93.2 |
MS.gene05362.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 1.24e-19 | 93.2 |
MS.gene05362.t1 | AT3G24715 | 41.667 | 108 | 56 | 2 | 58 | 165 | 175 | 275 | 1.24e-19 | 93.2 |
MS.gene05362.t1 | AT3G48240 | 50.000 | 88 | 42 | 1 | 59 | 146 | 14 | 99 | 1.46e-19 | 86.7 |
MS.gene05362.t1 | AT1G70640 | 47.253 | 91 | 47 | 1 | 59 | 149 | 8 | 97 | 7.77e-18 | 81.6 |
MS.gene05362.t1 | AT5G63130 | 47.872 | 94 | 47 | 1 | 56 | 149 | 12 | 103 | 3.78e-15 | 74.3 |
MS.gene05362.t1 | AT5G63130 | 47.872 | 94 | 47 | 1 | 56 | 149 | 12 | 103 | 3.78e-15 | 74.3 |
Find 107 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCTAGTGGTACCAATTA+TGG | 0.267374 | 6.3:+75724310 | MS.gene05362:CDS |
ACTATATTCATAGCCATAAT+TGG | 0.290780 | 6.3:-75724323 | None:intergenic |
AGCTTGCCTCCGGGGACATT+AGG | 0.320024 | 6.3:-75721999 | None:intergenic |
GGTTGCGGCGGTGGAGATAA+GGG | 0.328130 | 6.3:-75721856 | None:intergenic |
TCATCGACACGAACACGAAT+TGG | 0.342900 | 6.3:-75722680 | None:intergenic |
ACGGTCCACGACCACGATTC+TGG | 0.344429 | 6.3:-75722099 | None:intergenic |
GATGATGAGAGATCAGATTA+TGG | 0.354406 | 6.3:+75722869 | MS.gene05362:CDS |
TTCTTGATGATAAATAATCT+TGG | 0.357557 | 6.3:-75723786 | None:intergenic |
AGGAATGGTGGTTGCGGCGG+TGG | 0.359388 | 6.3:-75721865 | None:intergenic |
CCCATTGAAAGTGTGGTATC+TGG | 0.360704 | 6.3:-75722350 | None:intergenic |
GCTTGAAAACAATAACAATA+AGG | 0.362991 | 6.3:+75722547 | MS.gene05362:CDS |
ACAACAAAATAATGCTCCTT+TGG | 0.364011 | 6.3:+75724378 | MS.gene05362:CDS |
TTCATCTTTGACTCCTTCAA+TGG | 0.381472 | 6.3:+75722646 | MS.gene05362:CDS |
ACCAGATACCACACTTTCAA+TGG | 0.385542 | 6.3:+75722349 | MS.gene05362:CDS |
TGGTTGCGGCGGTGGAGATA+AGG | 0.395600 | 6.3:-75721857 | None:intergenic |
CCATACCTTGTAACTGAATC+TGG | 0.396366 | 6.3:-75722974 | None:intergenic |
GCTTGCCTCCGGGGACATTA+GGG | 0.396519 | 6.3:-75721998 | None:intergenic |
CATTATCTCCAGAAAATTGT+TGG | 0.402545 | 6.3:-75724459 | None:intergenic |
CGTGGTGGTGGCTGTGGTGG+TGG | 0.411827 | 6.3:-75721939 | None:intergenic |
GACCATCGATCAAGATTGAA+TGG | 0.427406 | 6.3:-75724637 | None:intergenic |
CATGAGACGAAGCTTGCCTC+CGG | 0.429165 | 6.3:-75722009 | None:intergenic |
TCAGATTATGGAGGACTAAT+CGG | 0.430519 | 6.3:+75722881 | MS.gene05362:CDS |
AGCTGGTACTTGAGAGTAAA+GGG | 0.442320 | 6.3:-75722179 | None:intergenic |
GCTTGTTGTTTCTTCTGCTA+TGG | 0.444407 | 6.3:+75722760 | MS.gene05362:CDS |
AATGCTGCAGCAGCAGCTGC+AGG | 0.444841 | 6.3:-75724424 | None:intergenic |
GTGGTGATGTGAATGTGAAT+AGG | 0.446979 | 6.3:+75722837 | MS.gene05362:CDS |
TGGTGATGTGAATGTGAATA+GGG | 0.453479 | 6.3:+75722838 | MS.gene05362:CDS |
GTTGCGGCGGTGGAGATAAG+GGG | 0.466311 | 6.3:-75721855 | None:intergenic |
CTTCACCAGATTCAGTTACA+AGG | 0.472765 | 6.3:+75722969 | MS.gene05362:CDS |
ATTATCTCCAGAAAATTGTT+GGG | 0.478016 | 6.3:-75724458 | None:intergenic |
CATGAGGGCGCGGCATTATG+TGG | 0.483512 | 6.3:-75722046 | None:intergenic |
GGTGGCAAATTCTCCATTGA+AGG | 0.487486 | 6.3:-75722659 | None:intergenic |
AATTATGGCTATGAATATAG+TGG | 0.488811 | 6.3:+75724325 | MS.gene05362:CDS |
TTGGATGATGTTAGGAGGAA+TGG | 0.492279 | 6.3:-75721880 | None:intergenic |
CTGTGGTGGTGGCGATGATA+AGG | 0.492297 | 6.3:-75721928 | None:intergenic |
CTTTCGAGAACAATTCTCAA+TGG | 0.494450 | 6.3:+75722152 | MS.gene05362:CDS |
GATAAGGACTCGATCGACTC+AGG | 0.496681 | 6.3:-75721912 | None:intergenic |
CATCTGATGTTACTGTAATG+AGG | 0.497110 | 6.3:-75722223 | None:intergenic |
GATAAATCTCTATGTTATGT+AGG | 0.497487 | 6.3:+75722068 | MS.gene05362:CDS |
ATGAGACGAAGCTTGCCTCC+GGG | 0.501595 | 6.3:-75722008 | None:intergenic |
GAAGCCATTGTCATTGCTGC+AGG | 0.505850 | 6.3:-75722791 | None:intergenic |
CCAGATACCACACTTTCAAT+GGG | 0.510170 | 6.3:+75722350 | MS.gene05362:CDS |
CTTCGTCTCATGTGCAGCTA+CGG | 0.512697 | 6.3:+75722020 | MS.gene05362:CDS |
TCGATGAAAATGCTGGTAGC+AGG | 0.519398 | 6.3:+75722696 | MS.gene05362:CDS |
GACCATTCAATCTTGATCGA+TGG | 0.521111 | 6.3:+75724635 | MS.gene05362:CDS |
GCAATGACAATGGCTTCAGC+TGG | 0.523790 | 6.3:+75722797 | MS.gene05362:CDS |
CTCACACCACCACTAGTCCT+TGG | 0.525251 | 6.3:-75722941 | None:intergenic |
TGACACCAGAATCGTGGTCG+TGG | 0.526695 | 6.3:+75722094 | MS.gene05362:CDS |
TTACTGTAATGAGGTTATCA+AGG | 0.526871 | 6.3:-75722214 | None:intergenic |
ACTCTAAGTCTTGATGATGA+AGG | 0.529888 | 6.3:-75722308 | None:intergenic |
CAGCTGCAGGAGTCATGGAT+TGG | 0.535143 | 6.3:-75724411 | None:intergenic |
TGTGATCGTGGTGGTGGCTG+TGG | 0.535147 | 6.3:-75721945 | None:intergenic |
TGAACAAGCTGCAATGGTAA+AGG | 0.535312 | 6.3:-75722917 | None:intergenic |
GATCGTGGTGGTGGCTGTGG+TGG | 0.546440 | 6.3:-75721942 | None:intergenic |
TTATTGCTTGAATCACTAGC+AGG | 0.547203 | 6.3:-75722494 | None:intergenic |
TAGTGATTCAAGCAATAACT+TGG | 0.550481 | 6.3:+75722499 | MS.gene05362:CDS |
GTTGATGCACTCAACAACTC+AGG | 0.551095 | 6.3:+75722410 | MS.gene05362:CDS |
GTCAAATAGAACTTCACAGC+CGG | 0.552582 | 6.3:+75724489 | MS.gene05362:CDS |
AGGAGGAATGGTGGTTGCGG+CGG | 0.553526 | 6.3:-75721868 | None:intergenic |
CAAGGTCTTCATGAGGAAGC+TGG | 0.553544 | 6.3:-75722196 | None:intergenic |
GTTAGGAGGAATGGTGGTTG+CGG | 0.554956 | 6.3:-75721871 | None:intergenic |
TTAACATGTGATCGTGGTGG+TGG | 0.560719 | 6.3:-75721951 | None:intergenic |
AGCAGCAGCTGCAGGAGTCA+TGG | 0.562009 | 6.3:-75724416 | None:intergenic |
TTGATGCACTCAACAACTCA+GGG | 0.562066 | 6.3:+75722411 | MS.gene05362:CDS |
AAGCTGGTACTTGAGAGTAA+AGG | 0.565630 | 6.3:-75722180 | None:intergenic |
CTTGGTTGAACAAGCTGCAA+TGG | 0.570036 | 6.3:-75722923 | None:intergenic |
GACTCCTTCCCTAATGTCCC+CGG | 0.577267 | 6.3:+75721990 | MS.gene05362:CDS |
CTTGTAACTGAATCTGGTGA+AGG | 0.582351 | 6.3:-75722968 | None:intergenic |
TCGACACGAACACGAATTGG+TGG | 0.582554 | 6.3:-75722677 | None:intergenic |
TTGTAATGAAACAAGATGGT+GGG | 0.586713 | 6.3:+75722738 | MS.gene05362:CDS |
CGTCTCATGTGCAGCTACGG+AGG | 0.586855 | 6.3:+75722023 | MS.gene05362:CDS |
CTTGTTCAACCAAGGACTAG+TGG | 0.587169 | 6.3:+75722932 | MS.gene05362:CDS |
TAACATAGAGATTTATCATG+AGG | 0.592227 | 6.3:-75722062 | None:intergenic |
AAGTGATCCCATTGAAAGTG+TGG | 0.597227 | 6.3:-75722357 | None:intergenic |
GCGGCGGTGGAGATAAGGGG+TGG | 0.603325 | 6.3:-75721852 | None:intergenic |
GAATATAGTGGTAATGTGGA+AGG | 0.607086 | 6.3:+75724337 | MS.gene05362:CDS |
AAAGTTGTAATGAAACAAGA+TGG | 0.607350 | 6.3:+75722734 | MS.gene05362:CDS |
AGAGATTTATCATGAGGGCG+CGG | 0.611116 | 6.3:-75722056 | None:intergenic |
CTATGAATATAGTGGTAATG+TGG | 0.616440 | 6.3:+75724333 | MS.gene05362:CDS |
AACATAGAGATTTATCATGA+GGG | 0.618870 | 6.3:-75722061 | None:intergenic |
TTCTCGAAAGACGTGAACAT+AGG | 0.620919 | 6.3:-75722139 | None:intergenic |
CATTGCAGCTTGTTCAACCA+AGG | 0.622441 | 6.3:+75722924 | MS.gene05362:CDS |
AACTCAGGGATTCTCTCAAG+AGG | 0.622550 | 6.3:+75722425 | MS.gene05362:CDS |
AATTCCTGCAGCAATGACAA+TGG | 0.625152 | 6.3:+75722787 | MS.gene05362:CDS |
GCCTCCGGGGACATTAGGGA+AGG | 0.625405 | 6.3:-75721994 | None:intergenic |
GTTGTAATGAAACAAGATGG+TGG | 0.626801 | 6.3:+75722737 | MS.gene05362:CDS |
GATGATGTTAGGAGGAATGG+TGG | 0.629860 | 6.3:-75721877 | None:intergenic |
CCATAATTGGTACCACTAGG+AGG | 0.630341 | 6.3:-75724310 | None:intergenic |
GTTCGTGTCGATGAAAATGC+TGG | 0.632505 | 6.3:+75722689 | MS.gene05362:CDS |
GGTCTCTCAGAGAAGAACTA+CGG | 0.635977 | 6.3:-75722118 | None:intergenic |
TATCATCAAGAACAAGTCCA+AGG | 0.646741 | 6.3:+75723797 | MS.gene05362:CDS |
GTTTCATTAACATGTGATCG+TGG | 0.649887 | 6.3:-75721957 | None:intergenic |
TGAGACGAAGCTTGCCTCCG+GGG | 0.658630 | 6.3:-75722007 | None:intergenic |
ACAAGCTGCAATGGTAAAGG+CGG | 0.660310 | 6.3:-75722914 | None:intergenic |
AATGTTGTGAATTCAACACC+TGG | 0.661594 | 6.3:+75722593 | MS.gene05362:CDS |
TAGCCATAATTGGTACCACT+AGG | 0.663030 | 6.3:-75724313 | None:intergenic |
ATGATGCAAAATCTGAGACA+TGG | 0.663147 | 6.3:+75722384 | MS.gene05362:CDS |
AAATCTCTATGTTATGTAGG+CGG | 0.670686 | 6.3:+75722071 | MS.gene05362:CDS |
GATGAGAGATCAGATTATGG+AGG | 0.672016 | 6.3:+75722872 | MS.gene05362:CDS |
GATTGGTACTGAGTAACCAA+AGG | 0.673524 | 6.3:-75724394 | None:intergenic |
ATTAATGTAGCTCCTCCTAG+TGG | 0.674238 | 6.3:+75724298 | MS.gene05362:intron |
AGGTTATCAAGGTCTTCATG+AGG | 0.680812 | 6.3:-75722203 | None:intergenic |
GTTCAACCAAGGACTAGTGG+TGG | 0.681531 | 6.3:+75722935 | MS.gene05362:CDS |
AGGCGGTGACACCAGAATCG+TGG | 0.682815 | 6.3:+75722088 | MS.gene05362:CDS |
GGAGTTGTTACTGCTACTAG+TGG | 0.696005 | 6.3:+75722818 | MS.gene05362:CDS |
TCATTAACATGTGATCGTGG+TGG | 0.712353 | 6.3:-75721954 | None:intergenic |
TCCTTCCCTAATGTCCCCGG+AGG | 0.714140 | 6.3:+75721993 | MS.gene05362:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGATGTTTCAAAGTAATAA+TGG | + | chr6.3:75723377-75723396 | MS.gene05362:intron | 20.0% |
!! | AATAGTATAATGCCTATAAT+AGG | + | chr6.3:75723121-75723140 | MS.gene05362:intron | 20.0% |
!! | ATGGTTAAAGACAATAAATT+TGG | + | chr6.3:75723408-75723427 | MS.gene05362:intron | 20.0% |
!! | TAATATAAATGACCCTAATT+TGG | + | chr6.3:75724105-75724124 | MS.gene05362:intron | 20.0% |
!! | TCCTATAGACAAATTTAAAA+TGG | - | chr6.3:75723439-75723458 | None:intergenic | 20.0% |
!!! | ACCATTTTAAATTTGTCTAT+AGG | + | chr6.3:75723435-75723454 | MS.gene05362:intron | 20.0% |
!!! | CACAAACTTTTTTAGAATTA+AGG | + | chr6.3:75723223-75723242 | MS.gene05362:intron | 20.0% |
!!! | TTCTTGATGATAAATAATCT+TGG | - | chr6.3:75723789-75723808 | None:intergenic | 20.0% |
! | AAAGTTGTAATGAAACAAGA+TGG | + | chr6.3:75722734-75722753 | MS.gene05362:CDS | 25.0% |
! | AACATAGAGATTTATCATGA+GGG | - | chr6.3:75722064-75722083 | None:intergenic | 25.0% |
! | AATTATGGCTATGAATATAG+TGG | + | chr6.3:75724325-75724344 | MS.gene05362:CDS | 25.0% |
! | ACTATATTCATAGCCATAAT+TGG | - | chr6.3:75724326-75724345 | None:intergenic | 25.0% |
! | ATTATCTCCAGAAAATTGTT+GGG | - | chr6.3:75724461-75724480 | None:intergenic | 25.0% |
! | ATTGCTAATGTCAAAAAACA+TGG | - | chr6.3:75723631-75723650 | None:intergenic | 25.0% |
! | CAATTTCAACAACAATTTGT+TGG | + | chr6.3:75724241-75724260 | MS.gene05362:intron | 25.0% |
! | GATAAATCTCTATGTTATGT+AGG | + | chr6.3:75722068-75722087 | MS.gene05362:CDS | 25.0% |
! | GCTTGAAAACAATAACAATA+AGG | + | chr6.3:75722547-75722566 | MS.gene05362:CDS | 25.0% |
! | TAACATAGAGATTTATCATG+AGG | - | chr6.3:75722065-75722084 | None:intergenic | 25.0% |
! | TATTAGAAGCTACCAAATTA+GGG | - | chr6.3:75724120-75724139 | None:intergenic | 25.0% |
! | TGTTGTAATGTCATGTTATA+TGG | - | chr6.3:75724085-75724104 | None:intergenic | 25.0% |
! | TTCGAATTCTAAATTTGTCA+AGG | - | chr6.3:75724611-75724630 | None:intergenic | 25.0% |
!! | ACTTGGTAATATGATGAAAT+TGG | - | chr6.3:75723977-75723996 | None:intergenic | 25.0% |
!!! | AAGCAATAATTGTTGCTTTT+TGG | - | chr6.3:75723310-75723329 | None:intergenic | 25.0% |
!!! | TGTTGTTGAAATTGATTTGA+AGG | - | chr6.3:75724235-75724254 | None:intergenic | 25.0% |
!!! | TTTTTTCGTGTTCCTATTAT+AGG | - | chr6.3:75723136-75723155 | None:intergenic | 25.0% |
AAATCTCTATGTTATGTAGG+CGG | + | chr6.3:75722071-75722090 | MS.gene05362:CDS | 30.0% | |
AACATGTAACTTGAATCTTG+AGG | - | chr6.3:75723842-75723861 | None:intergenic | 30.0% | |
ACAACAAAATAATGCTCCTT+TGG | + | chr6.3:75724378-75724397 | MS.gene05362:CDS | 30.0% | |
AGTAATAATGGTCAATGAGA+TGG | + | chr6.3:75723389-75723408 | MS.gene05362:intron | 30.0% | |
ATGTTTAGTGCGATAAAGTT+TGG | + | chr6.3:75723159-75723178 | MS.gene05362:intron | 30.0% | |
CATCAGAAAACTTAGAATAC+TGG | - | chr6.3:75724564-75724583 | None:intergenic | 30.0% | |
CATTATCTCCAGAAAATTGT+TGG | - | chr6.3:75724462-75724481 | None:intergenic | 30.0% | |
CTATTAGAAGCTACCAAATT+AGG | - | chr6.3:75724121-75724140 | None:intergenic | 30.0% | |
TAGTGACATAGATGTATTTG+TGG | - | chr6.3:75723356-75723375 | None:intergenic | 30.0% | |
TAGTGATTCAAGCAATAACT+TGG | + | chr6.3:75722499-75722518 | MS.gene05362:CDS | 30.0% | |
TATAGGAGATAGATGAATGA+AGG | + | chr6.3:75723452-75723471 | MS.gene05362:intron | 30.0% | |
TGAATTTGTGATTGTTGTGA+TGG | - | chr6.3:75724010-75724029 | None:intergenic | 30.0% | |
TTACTGTAATGAGGTTATCA+AGG | - | chr6.3:75722217-75722236 | None:intergenic | 30.0% | |
TTGAATTTGATGCCACATTA+GGG | - | chr6.3:75724198-75724217 | None:intergenic | 30.0% | |
TTGTAATGAAACAAGATGGT+GGG | + | chr6.3:75722738-75722757 | MS.gene05362:CDS | 30.0% | |
! | AGTGCTTTATTAGGGTAAAT+TGG | - | chr6.3:75724172-75724191 | None:intergenic | 30.0% |
! | CAGTATTCTAAGTTTTCTGA+TGG | + | chr6.3:75724562-75724581 | MS.gene05362:intron | 30.0% |
! | CTAATTTGGTAGCTTCTAAT+AGG | + | chr6.3:75724119-75724138 | MS.gene05362:intron | 30.0% |
! | CTATGAATATAGTGGTAATG+TGG | + | chr6.3:75724333-75724352 | MS.gene05362:CDS | 30.0% |
! | GTGTAACATTACTCTCTTTT+TGG | + | chr6.3:75723006-75723025 | MS.gene05362:intron | 30.0% |
! | GTTCCATTTTGTGGTATTAT+TGG | - | chr6.3:75724145-75724164 | None:intergenic | 30.0% |
! | TAGGGTTTAGTGCTTTATTA+GGG | - | chr6.3:75724180-75724199 | None:intergenic | 30.0% |
! | TGAAATTGGAACTTGATTTG+TGG | - | chr6.3:75723963-75723982 | None:intergenic | 30.0% |
! | TGAACAAATTGTTGTTGTTG+TGG | - | chr6.3:75723908-75723927 | None:intergenic | 30.0% |
! | TTAGGGTTTAGTGCTTTATT+AGG | - | chr6.3:75724181-75724200 | None:intergenic | 30.0% |
!! | GATAGACTATTTTCTAGCAT+AGG | - | chr6.3:75722623-75722642 | None:intergenic | 30.0% |
!! | TTGTTGATTTGGATCTGATT+GGG | - | chr6.3:75723870-75723889 | None:intergenic | 30.0% |
!!! | TAGTTTTGTTGGATGATGTT+AGG | - | chr6.3:75721891-75721910 | None:intergenic | 30.0% |
AATCTGGATCCGATTTATAC+CGG | - | chr6.3:75724511-75724530 | None:intergenic | 35.0% | |
AATGTTGTGAATTCAACACC+TGG | + | chr6.3:75722593-75722612 | MS.gene05362:CDS | 35.0% | |
ACATACACTGGATATTGTTG+TGG | - | chr6.3:75724037-75724056 | None:intergenic | 35.0% | |
AGGCCAATAATACCACAAAA+TGG | + | chr6.3:75724139-75724158 | MS.gene05362:intron | 35.0% | |
ATTTGTGATTGTTGTGATGG+TGG | - | chr6.3:75724007-75724026 | None:intergenic | 35.0% | |
CATCTGATGTTACTGTAATG+AGG | - | chr6.3:75722226-75722245 | None:intergenic | 35.0% | |
CTTTCGAGAACAATTCTCAA+TGG | + | chr6.3:75722152-75722171 | MS.gene05362:CDS | 35.0% | |
GATGATGAGAGATCAGATTA+TGG | + | chr6.3:75722869-75722888 | MS.gene05362:CDS | 35.0% | |
GTAACTTGAATCTTGAGGTT+TGG | - | chr6.3:75723837-75723856 | None:intergenic | 35.0% | |
GTTGAATTTGATGCCACATT+AGG | - | chr6.3:75724199-75724218 | None:intergenic | 35.0% | |
GTTGTAATGAAACAAGATGG+TGG | + | chr6.3:75722737-75722756 | MS.gene05362:CDS | 35.0% | |
GTTTCATTAACATGTGATCG+TGG | - | chr6.3:75721960-75721979 | None:intergenic | 35.0% | |
TATCATCAAGAACAAGTCCA+AGG | + | chr6.3:75723797-75723816 | MS.gene05362:CDS | 35.0% | |
TCAGATTATGGAGGACTAAT+CGG | + | chr6.3:75722881-75722900 | MS.gene05362:CDS | 35.0% | |
TGGTCTCTATATTTGTACCT+TGG | - | chr6.3:75723817-75723836 | None:intergenic | 35.0% | |
TGGTGTATATAGTGAGTGTT+GGG | - | chr6.3:75723932-75723951 | None:intergenic | 35.0% | |
TTATTGCTTGAATCACTAGC+AGG | - | chr6.3:75722497-75722516 | None:intergenic | 35.0% | |
TTCATCTTTGACTCCTTCAA+TGG | + | chr6.3:75722646-75722665 | MS.gene05362:CDS | 35.0% | |
! | ACAAATTGTTGTTGTTGTGG+TGG | - | chr6.3:75723905-75723924 | None:intergenic | 35.0% |
! | ATGATGCAAAATCTGAGACA+TGG | + | chr6.3:75722384-75722403 | MS.gene05362:CDS | 35.0% |
! | GAATATAGTGGTAATGTGGA+AGG | + | chr6.3:75724337-75724356 | MS.gene05362:CDS | 35.0% |
! | GCTTTATTAGGGTAAATTGG+TGG | - | chr6.3:75724169-75724188 | None:intergenic | 35.0% |
! | TAAAGCACTAAACCCTAATG+TGG | + | chr6.3:75724183-75724202 | MS.gene05362:intron | 35.0% |
! | TGGTGATGTGAATGTGAATA+GGG | + | chr6.3:75722838-75722857 | MS.gene05362:CDS | 35.0% |
! | TTTTGTTGGATGATGTTAGG+AGG | - | chr6.3:75721888-75721907 | None:intergenic | 35.0% |
!! | ACTCTAAGTCTTGATGATGA+AGG | - | chr6.3:75722311-75722330 | None:intergenic | 35.0% |
!! | GAACTTGATTTGTGGATGTA+GGG | - | chr6.3:75723955-75723974 | None:intergenic | 35.0% |
!! | GTTGTTGATTTGGATCTGAT+TGG | - | chr6.3:75723871-75723890 | None:intergenic | 35.0% |
!! | TGTGGTTGATGATGAAATTG+AGG | - | chr6.3:75724271-75724290 | None:intergenic | 35.0% |
!! | TGTTGATTTGGATCTGATTG+GGG | - | chr6.3:75723869-75723888 | None:intergenic | 35.0% |
AAGCTGGTACTTGAGAGTAA+AGG | - | chr6.3:75722183-75722202 | None:intergenic | 40.0% | |
AAGTGATCCCATTGAAAGTG+TGG | - | chr6.3:75722360-75722379 | None:intergenic | 40.0% | |
AATTCCTGCAGCAATGACAA+TGG | + | chr6.3:75722787-75722806 | MS.gene05362:CDS | 40.0% | |
ACACTGGATATTGTTGTGGA+TGG | - | chr6.3:75724033-75724052 | None:intergenic | 40.0% | |
ACCAGATACCACACTTTCAA+TGG | + | chr6.3:75722349-75722368 | MS.gene05362:CDS | 40.0% | |
ACTTCACAGCCGGTATAAAT+CGG | + | chr6.3:75724499-75724518 | MS.gene05362:intron | 40.0% | |
ACTTGAAAATTCCGACTGCA+GGG | - | chr6.3:75724534-75724553 | None:intergenic | 40.0% | |
AGCTGGTACTTGAGAGTAAA+GGG | - | chr6.3:75722182-75722201 | None:intergenic | 40.0% | |
AGGTTATCAAGGTCTTCATG+AGG | - | chr6.3:75722206-75722225 | None:intergenic | 40.0% | |
ATTAATGTAGCTCCTCCTAG+TGG | + | chr6.3:75724298-75724317 | MS.gene05362:intron | 40.0% | |
CCAATAGGCATTACATACAC+TGG | - | chr6.3:75724049-75724068 | None:intergenic | 40.0% | |
CCAGATACCACACTTTCAAT+GGG | + | chr6.3:75722350-75722369 | MS.gene05362:CDS | 40.0% | |
CCAGATTCAGTTACAAGGTA+TGG | + | chr6.3:75722974-75722993 | MS.gene05362:intron | 40.0% | |
CCAGTGTATGTAATGCCTAT+TGG | + | chr6.3:75724046-75724065 | MS.gene05362:intron | 40.0% | |
CCATACCTTGTAACTGAATC+TGG | - | chr6.3:75722977-75722996 | None:intergenic | 40.0% | |
CTAGGAGGAGCTACATTAAT+AGG | - | chr6.3:75724298-75724317 | None:intergenic | 40.0% | |
CTTCACCAGATTCAGTTACA+AGG | + | chr6.3:75722969-75722988 | MS.gene05362:CDS | 40.0% | |
CTTGTAACTGAATCTGGTGA+AGG | - | chr6.3:75722971-75722990 | None:intergenic | 40.0% | |
GACCATCGATCAAGATTGAA+TGG | - | chr6.3:75724640-75724659 | None:intergenic | 40.0% | |
GACCATTCAATCTTGATCGA+TGG | + | chr6.3:75724635-75724654 | MS.gene05362:CDS | 40.0% | |
GATGAGAGATCAGATTATGG+AGG | + | chr6.3:75722872-75722891 | MS.gene05362:CDS | 40.0% | |
GCTACATTAATAGGATGCTG+TGG | - | chr6.3:75724289-75724308 | None:intergenic | 40.0% | |
GTCAAATAGAACTTCACAGC+CGG | + | chr6.3:75724489-75724508 | MS.gene05362:CDS | 40.0% | |
GTGGTGTATATAGTGAGTGT+TGG | - | chr6.3:75723933-75723952 | None:intergenic | 40.0% | |
TACTTGAAAATTCCGACTGC+AGG | - | chr6.3:75724535-75724554 | None:intergenic | 40.0% | |
TAGCCATAATTGGTACCACT+AGG | - | chr6.3:75724316-75724335 | None:intergenic | 40.0% | |
TCATTAACATGTGATCGTGG+TGG | - | chr6.3:75721957-75721976 | None:intergenic | 40.0% | |
TCTAGCTAATCGATACGTAC+TGG | - | chr6.3:75723278-75723297 | None:intergenic | 40.0% | |
TGAACAAGCTGCAATGGTAA+AGG | - | chr6.3:75722920-75722939 | None:intergenic | 40.0% | |
TTCTCGAAAGACGTGAACAT+AGG | - | chr6.3:75722142-75722161 | None:intergenic | 40.0% | |
TTGATGCACTCAACAACTCA+GGG | + | chr6.3:75722411-75722430 | MS.gene05362:CDS | 40.0% | |
TTGGATGATGTTAGGAGGAA+TGG | - | chr6.3:75721883-75721902 | None:intergenic | 40.0% | |
! | AATTGTTGTTGTTGTGGTGG+TGG | - | chr6.3:75723902-75723921 | None:intergenic | 40.0% |
! | ATTGGTGGAGTTCCATTTTG+TGG | - | chr6.3:75724154-75724173 | None:intergenic | 40.0% |
! | GATGCTTCCCAACAATTTTC+TGG | + | chr6.3:75724451-75724470 | MS.gene05362:CDS | 40.0% |
! | GATTGGTACTGAGTAACCAA+AGG | - | chr6.3:75724397-75724416 | None:intergenic | 40.0% |
! | GGTTGTTGGAGTTGTTGATT+TGG | - | chr6.3:75723881-75723900 | None:intergenic | 40.0% |
! | GTGGTGATGTGAATGTGAAT+AGG | + | chr6.3:75722837-75722856 | MS.gene05362:CDS | 40.0% |
!! | GCTTGTTGTTTCTTCTGCTA+TGG | + | chr6.3:75722760-75722779 | MS.gene05362:CDS | 40.0% |
!! | GGAACTTGATTTGTGGATGT+AGG | - | chr6.3:75723956-75723975 | None:intergenic | 40.0% |
!! | TTTTCTAGCATAGGTGAACC+AGG | - | chr6.3:75722614-75722633 | None:intergenic | 40.0% |
!!! | TCGACTCAGGATAGTTTTGT+TGG | - | chr6.3:75721902-75721921 | None:intergenic | 40.0% |
AACTCAGGGATTCTCTCAAG+AGG | + | chr6.3:75722425-75722444 | MS.gene05362:CDS | 45.0% | |
ACAAGCTGCAATGGTAAAGG+CGG | - | chr6.3:75722917-75722936 | None:intergenic | 45.0% | |
AGAGATTTATCATGAGGGCG+CGG | - | chr6.3:75722059-75722078 | None:intergenic | 45.0% | |
AGTTTGGTTGTTGTAGCTGC+TGG | + | chr6.3:75723175-75723194 | MS.gene05362:intron | 45.0% | |
CCATAATTGGTACCACTAGG+AGG | - | chr6.3:75724313-75724332 | None:intergenic | 45.0% | |
CCTCCTAGTGGTACCAATTA+TGG | + | chr6.3:75724310-75724329 | MS.gene05362:CDS | 45.0% | |
CTTGGTTGAACAAGCTGCAA+TGG | - | chr6.3:75722926-75722945 | None:intergenic | 45.0% | |
CTTGTTCAACCAAGGACTAG+TGG | + | chr6.3:75722932-75722951 | MS.gene05362:CDS | 45.0% | |
GATGATGTTAGGAGGAATGG+TGG | - | chr6.3:75721880-75721899 | None:intergenic | 45.0% | |
GCTTTGCCACAACACATCTT+AGG | + | chr6.3:75723326-75723345 | MS.gene05362:intron | 45.0% | |
GGAGTTGTTACTGCTACTAG+TGG | + | chr6.3:75722818-75722837 | MS.gene05362:CDS | 45.0% | |
GGTCTCTCAGAGAAGAACTA+CGG | - | chr6.3:75722121-75722140 | None:intergenic | 45.0% | |
GGTGGCAAATTCTCCATTGA+AGG | - | chr6.3:75722662-75722681 | None:intergenic | 45.0% | |
GGTTGTTGCGTAGATCCAAT+AGG | - | chr6.3:75724064-75724083 | None:intergenic | 45.0% | |
GTGTCATGTTACGTCTCTGT+TGG | + | chr6.3:75723669-75723688 | MS.gene05362:intron | 45.0% | |
GTTGATGCACTCAACAACTC+AGG | + | chr6.3:75722410-75722429 | MS.gene05362:CDS | 45.0% | |
TCATCGACACGAACACGAAT+TGG | - | chr6.3:75722683-75722702 | None:intergenic | 45.0% | |
TCGATGAAAATGCTGGTAGC+AGG | + | chr6.3:75722696-75722715 | MS.gene05362:CDS | 45.0% | |
TTAACATGTGATCGTGGTGG+TGG | - | chr6.3:75721954-75721973 | None:intergenic | 45.0% | |
! | CATTGCAGCTTGTTCAACCA+AGG | + | chr6.3:75722924-75722943 | MS.gene05362:CDS | 45.0% |
! | CCCATTGAAAGTGTGGTATC+TGG | - | chr6.3:75722353-75722372 | None:intergenic | 45.0% |
! | GTTCGTGTCGATGAAAATGC+TGG | + | chr6.3:75722689-75722708 | MS.gene05362:CDS | 45.0% |
! | TGATTTGGATCTGATTGGGG+TGG | - | chr6.3:75723866-75723885 | None:intergenic | 45.0% |
!! | CTTGATTTGTGGATGTAGGG+TGG | - | chr6.3:75723952-75723971 | None:intergenic | 45.0% |
!! | GTGATTGTTGTGATGGTGGA+GGG | - | chr6.3:75724003-75724022 | None:intergenic | 45.0% |
!! | TGTGATTGTTGTGATGGTGG+AGG | - | chr6.3:75724004-75724023 | None:intergenic | 45.0% |
AATTCCGACTGCAGGGAATC+TGG | - | chr6.3:75724527-75724546 | None:intergenic | 50.0% | |
CAAGGTCTTCATGAGGAAGC+TGG | - | chr6.3:75722199-75722218 | None:intergenic | 50.0% | |
CTTCGTCTCATGTGCAGCTA+CGG | + | chr6.3:75722020-75722039 | MS.gene05362:CDS | 50.0% | |
GAAGCCATTGTCATTGCTGC+AGG | - | chr6.3:75722794-75722813 | None:intergenic | 50.0% | |
GCAATGACAATGGCTTCAGC+TGG | + | chr6.3:75722797-75722816 | MS.gene05362:CDS | 50.0% | |
GGTCTGCCTAAGATGTGTTG+TGG | - | chr6.3:75723335-75723354 | None:intergenic | 50.0% | |
GTTAGGAGGAATGGTGGTTG+CGG | - | chr6.3:75721874-75721893 | None:intergenic | 50.0% | |
TCGACACGAACACGAATTGG+TGG | - | chr6.3:75722680-75722699 | None:intergenic | 50.0% | |
! | GATAAGGACTCGATCGACTC+AGG | - | chr6.3:75721915-75721934 | None:intergenic | 50.0% |
! | GTTCAACCAAGGACTAGTGG+TGG | + | chr6.3:75722935-75722954 | MS.gene05362:CDS | 50.0% |
!! | GTGATGGTGGAGGGTAAACT+TGG | - | chr6.3:75723994-75724013 | None:intergenic | 50.0% |
!! | GTTGTTGTGGTGGTGGTTGT+TGG | - | chr6.3:75723895-75723914 | None:intergenic | 50.0% |
ATGAGACGAAGCTTGCCTCC+GGG | - | chr6.3:75722011-75722030 | None:intergenic | 55.0% | |
CAGCTGCAGGAGTCATGGAT+TGG | - | chr6.3:75724414-75724433 | None:intergenic | 55.0% | |
CATGAGACGAAGCTTGCCTC+CGG | - | chr6.3:75722012-75722031 | None:intergenic | 55.0% | |
CTCACACCACCACTAGTCCT+TGG | - | chr6.3:75722944-75722963 | None:intergenic | 55.0% | |
GACTCCTTCCCTAATGTCCC+CGG | + | chr6.3:75721990-75722009 | MS.gene05362:CDS | 55.0% | |
GGATCCAGATTCCCTGCAGT+CGG | + | chr6.3:75724520-75724539 | MS.gene05362:intron | 55.0% | |
TGACACCAGAATCGTGGTCG+TGG | + | chr6.3:75722094-75722113 | MS.gene05362:CDS | 55.0% | |
!! | CTGTGGTGGTGGCGATGATA+AGG | - | chr6.3:75721931-75721950 | None:intergenic | 55.0% |
AATGCTGCAGCAGCAGCTGC+AGG | - | chr6.3:75724427-75724446 | None:intergenic | 60.0% | |
ACGGTCCACGACCACGATTC+TGG | - | chr6.3:75722102-75722121 | None:intergenic | 60.0% | |
AGCAGCAGCTGCAGGAGTCA+TGG | - | chr6.3:75724419-75724438 | None:intergenic | 60.0% | |
AGCTTGCCTCCGGGGACATT+AGG | - | chr6.3:75722002-75722021 | None:intergenic | 60.0% | |
AGGAGGAATGGTGGTTGCGG+CGG | - | chr6.3:75721871-75721890 | None:intergenic | 60.0% | |
AGGCGGTGACACCAGAATCG+TGG | + | chr6.3:75722088-75722107 | MS.gene05362:CDS | 60.0% | |
CGTCTCATGTGCAGCTACGG+AGG | + | chr6.3:75722023-75722042 | MS.gene05362:CDS | 60.0% | |
GCTTGCCTCCGGGGACATTA+GGG | - | chr6.3:75722001-75722020 | None:intergenic | 60.0% | |
GGTTGCGGCGGTGGAGATAA+GGG | - | chr6.3:75721859-75721878 | None:intergenic | 60.0% | |
GTTGCGGCGGTGGAGATAAG+GGG | - | chr6.3:75721858-75721877 | None:intergenic | 60.0% | |
TCCTTCCCTAATGTCCCCGG+AGG | + | chr6.3:75721993-75722012 | MS.gene05362:CDS | 60.0% | |
TGAGACGAAGCTTGCCTCCG+GGG | - | chr6.3:75722010-75722029 | None:intergenic | 60.0% | |
TGGTTGCGGCGGTGGAGATA+AGG | - | chr6.3:75721860-75721879 | None:intergenic | 60.0% | |
! | CATGAGGGCGCGGCATTATG+TGG | - | chr6.3:75722049-75722068 | None:intergenic | 60.0% |
!! | TGTGATCGTGGTGGTGGCTG+TGG | - | chr6.3:75721948-75721967 | None:intergenic | 60.0% |
AGGAATGGTGGTTGCGGCGG+TGG | - | chr6.3:75721868-75721887 | None:intergenic | 65.0% | |
GCCTCCGGGGACATTAGGGA+AGG | - | chr6.3:75721997-75722016 | None:intergenic | 65.0% | |
!! | GATCGTGGTGGTGGCTGTGG+TGG | - | chr6.3:75721945-75721964 | None:intergenic | 65.0% |
GCGGCGGTGGAGATAAGGGG+TGG | - | chr6.3:75721855-75721874 | None:intergenic | 70.0% | |
!! | CGTGGTGGTGGCTGTGGTGG+TGG | - | chr6.3:75721942-75721961 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 75721846 | 75724670 | 75721846 | ID=MS.gene05362 |
chr6.3 | mRNA | 75721846 | 75724670 | 75721846 | ID=MS.gene05362.t1;Parent=MS.gene05362 |
chr6.3 | exon | 75721846 | 75722990 | 75721846 | ID=MS.gene05362.t1.exon1;Parent=MS.gene05362.t1 |
chr6.3 | CDS | 75721846 | 75722990 | 75721846 | ID=cds.MS.gene05362.t1;Parent=MS.gene05362.t1 |
chr6.3 | exon | 75723751 | 75723818 | 75723751 | ID=MS.gene05362.t1.exon2;Parent=MS.gene05362.t1 |
chr6.3 | CDS | 75723751 | 75723818 | 75723751 | ID=cds.MS.gene05362.t1;Parent=MS.gene05362.t1 |
chr6.3 | exon | 75724308 | 75724510 | 75724308 | ID=MS.gene05362.t1.exon3;Parent=MS.gene05362.t1 |
chr6.3 | CDS | 75724308 | 75724510 | 75724308 | ID=cds.MS.gene05362.t1;Parent=MS.gene05362.t1 |
chr6.3 | exon | 75724623 | 75724670 | 75724623 | ID=MS.gene05362.t1.exon4;Parent=MS.gene05362.t1 |
chr6.3 | CDS | 75724623 | 75724670 | 75724623 | ID=cds.MS.gene05362.t1;Parent=MS.gene05362.t1 |
Gene Sequence |
Protein sequence |