Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82004.t1 | XP_013444541.1 | 95.8 | 285 | 8 | 1 | 1 | 285 | 1 | 281 | 7.50E-114 | 420.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82004.t1 | Q9FI03 | 34.0 | 153 | 99 | 1 | 109 | 259 | 34 | 186 | 2.7e-19 | 97.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82004.t1 | A0A072TMX2 | 95.8 | 285 | 8 | 1 | 1 | 285 | 1 | 281 | 5.4e-114 | 420.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene050363 | MS.gene82004 | PPI |
MS.gene82004 | MS.gene025640 | PPI |
MS.gene007146 | MS.gene82004 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82004.t1 | MTR_8g024250 | 95.088 | 285 | 10 | 2 | 1 | 285 | 1 | 281 | 0.0 | 500 |
MS.gene82004.t1 | MTR_7g118270 | 63.243 | 185 | 68 | 0 | 100 | 284 | 44 | 228 | 1.01e-88 | 264 |
MS.gene82004.t1 | MTR_7g106050 | 37.013 | 154 | 97 | 0 | 106 | 259 | 24 | 177 | 1.07e-29 | 112 |
MS.gene82004.t1 | MTR_4g051880 | 34.507 | 142 | 85 | 1 | 126 | 259 | 45 | 186 | 6.65e-22 | 91.7 |
MS.gene82004.t1 | MTR_3g092790 | 33.333 | 150 | 99 | 1 | 125 | 274 | 49 | 197 | 1.42e-21 | 90.5 |
MS.gene82004.t1 | MTR_2g086790 | 30.233 | 172 | 107 | 3 | 100 | 259 | 17 | 187 | 2.67e-20 | 87.4 |
MS.gene82004.t1 | MTR_1g057420 | 30.464 | 151 | 105 | 0 | 121 | 271 | 39 | 189 | 4.33e-20 | 86.3 |
MS.gene82004.t1 | MTR_2g011350 | 24.378 | 201 | 139 | 4 | 70 | 268 | 1 | 190 | 1.88e-15 | 73.6 |
MS.gene82004.t1 | MTR_5g087760 | 26.705 | 176 | 117 | 6 | 99 | 263 | 60 | 234 | 1.84e-12 | 66.2 |
MS.gene82004.t1 | MTR_4g119428 | 25.658 | 152 | 109 | 3 | 112 | 261 | 65 | 214 | 9.99e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82004.t1 | AT4G01410 | 49.198 | 187 | 95 | 0 | 99 | 285 | 41 | 227 | 1.18e-56 | 182 |
MS.gene82004.t1 | AT3G44220 | 29.762 | 168 | 118 | 0 | 109 | 276 | 27 | 194 | 1.56e-24 | 98.2 |
MS.gene82004.t1 | AT3G52470 | 30.857 | 175 | 115 | 4 | 100 | 271 | 17 | 188 | 2.46e-24 | 97.8 |
MS.gene82004.t1 | AT5G53730 | 33.557 | 149 | 97 | 1 | 113 | 259 | 38 | 186 | 3.00e-24 | 97.8 |
MS.gene82004.t1 | AT2G35960 | 30.968 | 155 | 107 | 0 | 117 | 271 | 36 | 190 | 2.22e-23 | 95.5 |
MS.gene82004.t1 | AT5G22200 | 32.692 | 156 | 105 | 0 | 121 | 276 | 43 | 198 | 3.93e-23 | 94.7 |
MS.gene82004.t1 | AT5G06330 | 35.220 | 159 | 93 | 7 | 121 | 273 | 39 | 193 | 6.99e-23 | 94.0 |
MS.gene82004.t1 | AT3G11660 | 33.735 | 166 | 101 | 7 | 99 | 259 | 16 | 177 | 1.28e-22 | 93.2 |
MS.gene82004.t1 | AT4G09590 | 29.814 | 161 | 113 | 0 | 103 | 263 | 23 | 183 | 2.46e-22 | 92.4 |
MS.gene82004.t1 | AT2G35970 | 30.435 | 161 | 112 | 0 | 103 | 263 | 23 | 183 | 9.35e-22 | 90.9 |
MS.gene82004.t1 | AT5G22870 | 27.933 | 179 | 122 | 2 | 88 | 260 | 9 | 186 | 1.74e-16 | 76.6 |
MS.gene82004.t1 | AT4G05220 | 24.405 | 168 | 125 | 2 | 103 | 270 | 47 | 212 | 1.48e-15 | 74.3 |
MS.gene82004.t1 | AT1G61760 | 27.374 | 179 | 127 | 2 | 103 | 280 | 45 | 221 | 5.23e-15 | 72.8 |
MS.gene82004.t1 | AT2G35980 | 27.848 | 158 | 113 | 1 | 106 | 262 | 45 | 202 | 1.21e-12 | 66.2 |
Find 73 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACGTGGTTGTTCCATTTC+TGG | 0.141448 | 8.2:-71550502 | None:intergenic |
GTGGGTCAGATTCCTCTTAT+TGG | 0.186108 | 8.2:+71551150 | MS.gene82004:CDS |
TGACGTGGTTGTTCCATTTC+GGG | 0.190056 | 8.2:-71550460 | None:intergenic |
TTGACGTGGTTGTTCCATTT+CGG | 0.237511 | 8.2:-71550461 | None:intergenic |
GCATTATAATCCTCATCTTA+TGG | 0.245398 | 8.2:+71550683 | MS.gene82004:CDS |
CATATGCAATGTTCACGTTT+TGG | 0.280824 | 8.2:-71550634 | None:intergenic |
TTGTCGCGGTTGTTCCATTT+CGG | 0.294802 | 8.2:-71550545 | None:intergenic |
TGTCGCGGTTGTTCCATTTC+GGG | 0.304192 | 8.2:-71550544 | None:intergenic |
TTGGTGTTGGATGAGAATTA+TGG | 0.323767 | 8.2:+71551006 | MS.gene82004:CDS |
TGGTGTTGGATGAGAATTAT+GGG | 0.333006 | 8.2:+71551007 | MS.gene82004:CDS |
TAAATGGATACACGTTTGTT+TGG | 0.340333 | 8.2:-71550826 | None:intergenic |
AGCATATGATGGGGCGTAAT+CGG | 0.346812 | 8.2:-71550889 | None:intergenic |
TTCAAAACATCCATCGAAAC+TGG | 0.348821 | 8.2:-71550979 | None:intergenic |
GACGTTGTGAATGGTGTTCT+TGG | 0.356343 | 8.2:-71550387 | None:intergenic |
GGAAAGCCTGTCAAAGTAAA+TGG | 0.359178 | 8.2:-71550842 | None:intergenic |
TATGCTTCCGTCGCTTTACT+TGG | 0.361015 | 8.2:+71550906 | MS.gene82004:CDS |
GTCACAAGTGCTGCAATCTA+TGG | 0.378150 | 8.2:+71550739 | MS.gene82004:CDS |
GTTCCATTTCGGGATATTGA+TGG | 0.381347 | 8.2:-71550534 | None:intergenic |
AACCATACCTTTGTGTTCCC+TGG | 0.386231 | 8.2:-71550587 | None:intergenic |
ACAATCTTCTTCCTCGTACT+TGG | 0.390574 | 8.2:+71550661 | MS.gene82004:CDS |
ACCGGCACGCCTCCTAAAAC+TGG | 0.405172 | 8.2:-71550955 | None:intergenic |
GCCAAGTGTGATTTATTGTT+GGG | 0.416075 | 8.2:+71551111 | MS.gene82004:CDS |
TGTGAATGGTGTTCTTGGTT+TGG | 0.417912 | 8.2:-71550382 | None:intergenic |
GGCAGGTTGAGGTGGAAAAC+TGG | 0.421371 | 8.2:+71551057 | MS.gene82004:CDS |
GGATGAGAATTATGGGGTGG+TGG | 0.422334 | 8.2:+71551014 | MS.gene82004:CDS |
TGCCAAGTGTGATTTATTGT+TGG | 0.432416 | 8.2:+71551110 | MS.gene82004:CDS |
GTGTATCCATTTACTTTGAC+AGG | 0.438624 | 8.2:+71550836 | MS.gene82004:CDS |
TTATTGTTGGGTTTGAAGAA+AGG | 0.446899 | 8.2:+71551123 | MS.gene82004:CDS |
ACGTCATCAATATCCAGAAA+TGG | 0.451333 | 8.2:+71550489 | MS.gene82004:CDS |
GATGAGAATTATGGGGTGGT+GGG | 0.453278 | 8.2:+71551015 | MS.gene82004:CDS |
TGCAATTCACAATCTTCATA+AGG | 0.457022 | 8.2:+71550800 | MS.gene82004:CDS |
ACGTTGTCAATACCCCGAAA+TGG | 0.457812 | 8.2:+71550447 | MS.gene82004:CDS |
TATGTATCCACATCACAAAC+TGG | 0.461285 | 8.2:-71551177 | None:intergenic |
ACGCCATCAATATCCCGAAA+TGG | 0.481535 | 8.2:+71550531 | MS.gene82004:CDS |
TGAAACTTATATTTCAAGGC+AGG | 0.482813 | 8.2:+71551040 | MS.gene82004:CDS |
GGTGTGAAACTTATATTTCA+AGG | 0.486868 | 8.2:+71551036 | MS.gene82004:CDS |
CAAACTGGAGCACCAATAAG+AGG | 0.488904 | 8.2:-71551162 | None:intergenic |
ACCATACCTTTGTGTTCCCT+GGG | 0.499208 | 8.2:-71550586 | None:intergenic |
ACATCCATCGAAACTGGAAC+CGG | 0.504452 | 8.2:-71550973 | None:intergenic |
GGTTTGAAGAAAGGTCTTGT+GGG | 0.505112 | 8.2:+71551132 | MS.gene82004:CDS |
TTATATTTCAAGGCAGGTTG+AGG | 0.505575 | 8.2:+71551046 | MS.gene82004:CDS |
AAAGCGACGGAAGCATATGA+TGG | 0.516968 | 8.2:-71550900 | None:intergenic |
GGGTTTGAAGAAAGGTCTTG+TGG | 0.531873 | 8.2:+71551131 | MS.gene82004:CDS |
TGCATTGAGATTGACATGTC+TGG | 0.540818 | 8.2:-71550781 | None:intergenic |
GGTGTTGGATGAGAATTATG+GGG | 0.556537 | 8.2:+71551008 | MS.gene82004:CDS |
TATTTCAAGGCAGGTTGAGG+TGG | 0.558650 | 8.2:+71551049 | MS.gene82004:CDS |
TCCCAGGGAACACAAAGGTA+TGG | 0.559531 | 8.2:+71550585 | MS.gene82004:CDS |
TGGTGCTCCAGTTTGTGATG+TGG | 0.562878 | 8.2:+71551170 | MS.gene82004:CDS |
TAGGGAAATGACGTTGTGAA+TGG | 0.563199 | 8.2:-71550396 | None:intergenic |
AAGCGACGGAAGCATATGAT+GGG | 0.563769 | 8.2:-71550899 | None:intergenic |
CGTGCCGGTTCCAGTTTCGA+TGG | 0.565718 | 8.2:+71550969 | MS.gene82004:CDS |
AACAACGACATCAATATCCC+AGG | 0.569261 | 8.2:+71550569 | MS.gene82004:CDS |
ACCCAACAATAAATCACACT+TGG | 0.575443 | 8.2:-71551112 | None:intergenic |
TGCTTCTCCAAGTAAAGCGA+CGG | 0.596510 | 8.2:-71550913 | None:intergenic |
TATGATGGGGCGTAATCGGA+TGG | 0.600494 | 8.2:-71550885 | None:intergenic |
GACGTGGTTGTTCCATTTCG+GGG | 0.622072 | 8.2:-71550459 | None:intergenic |
TGATGGCGTTGTTGTTGACG+TGG | 0.628102 | 8.2:-71550517 | None:intergenic |
GCACTTGTGACTGTGATGTG+AGG | 0.630907 | 8.2:-71550727 | None:intergenic |
ACAACGACATCAATATCCCA+GGG | 0.646531 | 8.2:+71550570 | MS.gene82004:CDS |
TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.2:-71550475 | None:intergenic |
GGTATGCAAGCCATAAGATG+AGG | 0.669740 | 8.2:-71550693 | None:intergenic |
ATGGTTTCTATATGACACAA+AGG | 0.671270 | 8.2:-71550866 | None:intergenic |
TGATGTCGTTGTTGTTGTCG+CGG | 0.672627 | 8.2:-71550559 | None:intergenic |
GGATTATAATGCCAAGTACG+AGG | 0.674453 | 8.2:-71550672 | None:intergenic |
GTTGGATGAGAATTATGGGG+TGG | 0.688698 | 8.2:+71551011 | MS.gene82004:CDS |
GGAGAAGCATGAAACCGTGT+CGG | 0.692283 | 8.2:+71550927 | MS.gene82004:CDS |
AGCGACGGAAGCATATGATG+GGG | 0.695019 | 8.2:-71550898 | None:intergenic |
TAAAACTGGTGATACCGACA+CGG | 0.699605 | 8.2:-71550941 | None:intergenic |
CAATATCCCAGGGAACACAA+AGG | 0.701119 | 8.2:+71550580 | MS.gene82004:CDS |
ATTGAGATTGACATGTCTGG+TGG | 0.701504 | 8.2:-71550778 | None:intergenic |
GTTTCTATATGACACAAAGG+CGG | 0.718743 | 8.2:-71550863 | None:intergenic |
GCATTAGGTACTCTATAACG+AGG | 0.741839 | 8.2:-71550610 | None:intergenic |
CTGGTGGTGAAGTTGCATTG+AGG | 0.741850 | 8.2:-71550762 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATGGTTTCTATATGACACAA+AGG | - | chr8.2:71550869-71550888 | None:intergenic | 30.0% | |
GCATTATAATCCTCATCTTA+TGG | + | chr8.2:71550683-71550702 | MS.gene82004:CDS | 30.0% | |
GGTGTGAAACTTATATTTCA+AGG | + | chr8.2:71551036-71551055 | MS.gene82004:CDS | 30.0% | |
TAAATGGATACACGTTTGTT+TGG | - | chr8.2:71550829-71550848 | None:intergenic | 30.0% | |
TGAAACTTATATTTCAAGGC+AGG | + | chr8.2:71551040-71551059 | MS.gene82004:CDS | 30.0% | |
TGCAATTCACAATCTTCATA+AGG | + | chr8.2:71550800-71550819 | MS.gene82004:CDS | 30.0% | |
TTATTGTTGGGTTTGAAGAA+AGG | + | chr8.2:71551123-71551142 | MS.gene82004:CDS | 30.0% | |
ACCCAACAATAAATCACACT+TGG | - | chr8.2:71551115-71551134 | None:intergenic | 35.0% | |
ACGTCATCAATATCCAGAAA+TGG | + | chr8.2:71550489-71550508 | MS.gene82004:CDS | 35.0% | |
GCCAAGTGTGATTTATTGTT+GGG | + | chr8.2:71551111-71551130 | MS.gene82004:CDS | 35.0% | |
GTGTATCCATTTACTTTGAC+AGG | + | chr8.2:71550836-71550855 | MS.gene82004:CDS | 35.0% | |
GTTTCTATATGACACAAAGG+CGG | - | chr8.2:71550866-71550885 | None:intergenic | 35.0% | |
TATGTATCCACATCACAAAC+TGG | - | chr8.2:71551180-71551199 | None:intergenic | 35.0% | |
TGCCAAGTGTGATTTATTGT+TGG | + | chr8.2:71551110-71551129 | MS.gene82004:CDS | 35.0% | |
TTATATTTCAAGGCAGGTTG+AGG | + | chr8.2:71551046-71551065 | MS.gene82004:CDS | 35.0% | |
TTCAAAACATCCATCGAAAC+TGG | - | chr8.2:71550982-71551001 | None:intergenic | 35.0% | |
! | CATATGCAATGTTCACGTTT+TGG | - | chr8.2:71550637-71550656 | None:intergenic | 35.0% |
! | GTTGTTGTGGCATTTTGTTA+GGG | - | chr8.2:71550417-71550436 | None:intergenic | 35.0% |
! | TGGTGTTGGATGAGAATTAT+GGG | + | chr8.2:71551007-71551026 | MS.gene82004:CDS | 35.0% |
! | TGTTGTTGTGGCATTTTGTT+AGG | - | chr8.2:71550418-71550437 | None:intergenic | 35.0% |
!! | GATGGATGTTTTGAATGGTT+TGG | + | chr8.2:71550987-71551006 | MS.gene82004:CDS | 35.0% |
!! | GTTTCGATGGATGTTTTGAA+TGG | + | chr8.2:71550982-71551001 | MS.gene82004:CDS | 35.0% |
!! | TTGGTGTTGGATGAGAATTA+TGG | + | chr8.2:71551006-71551025 | MS.gene82004:CDS | 35.0% |
!!! | TGTTTTGAATGGTTTGGTGT+TGG | + | chr8.2:71550993-71551012 | MS.gene82004:CDS | 35.0% |
AACAACGACATCAATATCCC+AGG | + | chr8.2:71550569-71550588 | MS.gene82004:CDS | 40.0% | |
ACAACGACATCAATATCCCA+GGG | + | chr8.2:71550570-71550589 | MS.gene82004:CDS | 40.0% | |
ACAATCTTCTTCCTCGTACT+TGG | + | chr8.2:71550661-71550680 | MS.gene82004:CDS | 40.0% | |
ATTGAGATTGACATGTCTGG+TGG | - | chr8.2:71550781-71550800 | None:intergenic | 40.0% | |
GCATTAGGTACTCTATAACG+AGG | - | chr8.2:71550613-71550632 | None:intergenic | 40.0% | |
GGAAAGCCTGTCAAAGTAAA+TGG | - | chr8.2:71550845-71550864 | None:intergenic | 40.0% | |
GGATTATAATGCCAAGTACG+AGG | - | chr8.2:71550675-71550694 | None:intergenic | 40.0% | |
GTTCCATTTCGGGATATTGA+TGG | - | chr8.2:71550537-71550556 | None:intergenic | 40.0% | |
TAAAACTGGTGATACCGACA+CGG | - | chr8.2:71550944-71550963 | None:intergenic | 40.0% | |
TAGGGAAATGACGTTGTGAA+TGG | - | chr8.2:71550399-71550418 | None:intergenic | 40.0% | |
TGCATTGAGATTGACATGTC+TGG | - | chr8.2:71550784-71550803 | None:intergenic | 40.0% | |
TGTGAATGGTGTTCTTGGTT+TGG | - | chr8.2:71550385-71550404 | None:intergenic | 40.0% | |
TTGACGTGGTTGTTCCATTT+CGG | - | chr8.2:71550464-71550483 | None:intergenic | 40.0% | |
! | CGTTGTTGTTGTTGTTGTTG+TGG | - | chr8.2:71550430-71550449 | None:intergenic | 40.0% |
! | GGTGTTGGATGAGAATTATG+GGG | + | chr8.2:71551008-71551027 | MS.gene82004:CDS | 40.0% |
! | GGTTTGAAGAAAGGTCTTGT+GGG | + | chr8.2:71551132-71551151 | MS.gene82004:CDS | 40.0% |
!! | ACTGTGATGTGAGGTTTTGA+GGG | - | chr8.2:71550721-71550740 | None:intergenic | 40.0% |
!!! | TGTTCACGTTTTGGAGCATT+AGG | - | chr8.2:71550628-71550647 | None:intergenic | 40.0% |
AACCATACCTTTGTGTTCCC+TGG | - | chr8.2:71550590-71550609 | None:intergenic | 45.0% | |
ACATCCATCGAAACTGGAAC+CGG | - | chr8.2:71550976-71550995 | None:intergenic | 45.0% | |
ACCATACCTTTGTGTTCCCT+GGG | - | chr8.2:71550589-71550608 | None:intergenic | 45.0% | |
ACGCCATCAATATCCCGAAA+TGG | + | chr8.2:71550531-71550550 | MS.gene82004:CDS | 45.0% | |
ACGTTGTCAATACCCCGAAA+TGG | + | chr8.2:71550447-71550466 | MS.gene82004:CDS | 45.0% | |
CAATATCCCAGGGAACACAA+AGG | + | chr8.2:71550580-71550599 | MS.gene82004:CDS | 45.0% | |
GACGTTGTGAATGGTGTTCT+TGG | - | chr8.2:71550390-71550409 | None:intergenic | 45.0% | |
GATGAGAATTATGGGGTGGT+GGG | + | chr8.2:71551015-71551034 | MS.gene82004:CDS | 45.0% | |
GGGTTTGAAGAAAGGTCTTG+TGG | + | chr8.2:71551131-71551150 | MS.gene82004:CDS | 45.0% | |
GGTATGCAAGCCATAAGATG+AGG | - | chr8.2:71550696-71550715 | None:intergenic | 45.0% | |
GTGGGTCAGATTCCTCTTAT+TGG | + | chr8.2:71551150-71551169 | MS.gene82004:CDS | 45.0% | |
GTTGGATGAGAATTATGGGG+TGG | + | chr8.2:71551011-71551030 | MS.gene82004:CDS | 45.0% | |
TGACGTGGTTGTTCCATTTC+GGG | - | chr8.2:71550463-71550482 | None:intergenic | 45.0% | |
TGACGTGGTTGTTCCATTTC+TGG | - | chr8.2:71550463-71550482 | None:intergenic | 45.0% | |
TGCTTCTCCAAGTAAAGCGA+CGG | - | chr8.2:71550916-71550935 | None:intergenic | 45.0% | |
TTGTCGCGGTTGTTCCATTT+CGG | - | chr8.2:71550548-71550567 | None:intergenic | 45.0% | |
! | AAAGCGACGGAAGCATATGA+TGG | - | chr8.2:71550903-71550922 | None:intergenic | 45.0% |
! | AAGCGACGGAAGCATATGAT+GGG | - | chr8.2:71550902-71550921 | None:intergenic | 45.0% |
! | AGCATATGATGGGGCGTAAT+CGG | - | chr8.2:71550892-71550911 | None:intergenic | 45.0% |
! | CAAACTGGAGCACCAATAAG+AGG | - | chr8.2:71551165-71551184 | None:intergenic | 45.0% |
! | GACTGTGATGTGAGGTTTTG+AGG | - | chr8.2:71550722-71550741 | None:intergenic | 45.0% |
! | GTCACAAGTGCTGCAATCTA+TGG | + | chr8.2:71550739-71550758 | MS.gene82004:CDS | 45.0% |
! | TATGCTTCCGTCGCTTTACT+TGG | + | chr8.2:71550906-71550925 | MS.gene82004:CDS | 45.0% |
! | TATTTCAAGGCAGGTTGAGG+TGG | + | chr8.2:71551049-71551068 | MS.gene82004:CDS | 45.0% |
! | TGATGACGTTGTTGTTGACG+TGG | - | chr8.2:71550478-71550497 | None:intergenic | 45.0% |
! | TGATGTCGTTGTTGTTGTCG+CGG | - | chr8.2:71550562-71550581 | None:intergenic | 45.0% |
!! | GTGTCGGTATCACCAGTTTT+AGG | + | chr8.2:71550943-71550962 | MS.gene82004:CDS | 45.0% |
!!! | TCGGTATCACCAGTTTTAGG+AGG | + | chr8.2:71550946-71550965 | MS.gene82004:CDS | 45.0% |
!!! | TGATGTGAGGTTTTGAGGGA+TGG | - | chr8.2:71550717-71550736 | None:intergenic | 45.0% |
GACGTGGTTGTTCCATTTCG+GGG | - | chr8.2:71550462-71550481 | None:intergenic | 50.0% | |
GCACTTGTGACTGTGATGTG+AGG | - | chr8.2:71550730-71550749 | None:intergenic | 50.0% | |
GGATGAGAATTATGGGGTGG+TGG | + | chr8.2:71551014-71551033 | MS.gene82004:CDS | 50.0% | |
TCCCAGGGAACACAAAGGTA+TGG | + | chr8.2:71550585-71550604 | MS.gene82004:CDS | 50.0% | |
TGGTGCTCCAGTTTGTGATG+TGG | + | chr8.2:71551170-71551189 | MS.gene82004:CDS | 50.0% | |
TGTCGCGGTTGTTCCATTTC+GGG | - | chr8.2:71550547-71550566 | None:intergenic | 50.0% | |
! | AGCGACGGAAGCATATGATG+GGG | - | chr8.2:71550901-71550920 | None:intergenic | 50.0% |
! | CTGGTGGTGAAGTTGCATTG+AGG | - | chr8.2:71550765-71550784 | None:intergenic | 50.0% |
! | GGAGAAGCATGAAACCGTGT+CGG | + | chr8.2:71550927-71550946 | MS.gene82004:CDS | 50.0% |
! | TATGATGGGGCGTAATCGGA+TGG | - | chr8.2:71550888-71550907 | None:intergenic | 50.0% |
! | TGATGGCGTTGTTGTTGACG+TGG | - | chr8.2:71550520-71550539 | None:intergenic | 50.0% |
! | GGCAGGTTGAGGTGGAAAAC+TGG | + | chr8.2:71551057-71551076 | MS.gene82004:CDS | 55.0% |
!!! | ACCAGTTTTAGGAGGCGTGC+CGG | + | chr8.2:71550954-71550973 | MS.gene82004:CDS | 55.0% |
ACCGGCACGCCTCCTAAAAC+TGG | - | chr8.2:71550958-71550977 | None:intergenic | 60.0% | |
!! | CGTGCCGGTTCCAGTTTCGA+TGG | + | chr8.2:71550969-71550988 | MS.gene82004:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 71550343 | 71551200 | 71550343 | ID=MS.gene82004 |
chr8.2 | mRNA | 71550343 | 71551200 | 71550343 | ID=MS.gene82004.t1;Parent=MS.gene82004 |
chr8.2 | exon | 71550343 | 71551200 | 71550343 | ID=MS.gene82004.t1.exon1;Parent=MS.gene82004.t1 |
chr8.2 | CDS | 71550343 | 71551200 | 71550343 | ID=cds.MS.gene82004.t1;Parent=MS.gene82004.t1 |
Gene Sequence |
Protein sequence |