Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82573.t1 | XP_003620477.1 | 98.1 | 828 | 16 | 0 | 1 | 828 | 1 | 828 | 0.00E+00 | 1623.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82573.t1 | E9PV86 | 28.6 | 280 | 149 | 11 | 484 | 721 | 260 | 530 | 9.5e-17 | 90.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82573.t1 | G7KN36 | 98.1 | 828 | 16 | 0 | 1 | 828 | 1 | 828 | 0.0e+00 | 1623.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05454 | MS.gene82573 | 0.875038 | 4.22E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82573.t1 | MTR_6g084400 | 98.068 | 828 | 16 | 0 | 1 | 828 | 1 | 828 | 0.0 | 1674 |
| MS.gene82573.t1 | MTR_8g104330 | 72.904 | 823 | 208 | 7 | 1 | 816 | 1 | 815 | 0.0 | 1215 |
| MS.gene82573.t1 | MTR_8g104330 | 76.159 | 755 | 167 | 6 | 67 | 816 | 16 | 762 | 0.0 | 1163 |
| MS.gene82573.t1 | MTR_8g104330 | 71.597 | 764 | 202 | 7 | 1 | 757 | 1 | 756 | 0.0 | 1114 |
| MS.gene82573.t1 | MTR_4g115660 | 23.561 | 556 | 343 | 26 | 72 | 595 | 51 | 556 | 5.45e-15 | 79.3 |
| MS.gene82573.t1 | MTR_2g072180 | 32.759 | 116 | 73 | 2 | 613 | 724 | 195 | 309 | 3.57e-14 | 77.0 |
| MS.gene82573.t1 | MTR_2g072180 | 32.759 | 116 | 73 | 2 | 613 | 724 | 285 | 399 | 3.95e-14 | 77.0 |
| MS.gene82573.t1 | MTR_2g072180 | 27.969 | 261 | 158 | 13 | 31 | 273 | 9 | 257 | 1.64e-11 | 68.6 |
| MS.gene82573.t1 | MTR_1g025550 | 20.463 | 518 | 338 | 23 | 97 | 595 | 69 | 531 | 1.15e-13 | 75.1 |
| MS.gene82573.t1 | MTR_3g106660 | 22.538 | 528 | 336 | 25 | 101 | 594 | 66 | 554 | 4.96e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82573.t1 | AT3G18370 | 58.488 | 807 | 328 | 4 | 15 | 821 | 14 | 813 | 0.0 | 900 |
| MS.gene82573.t1 | AT1G05500 | 23.563 | 522 | 328 | 24 | 101 | 595 | 73 | 550 | 1.10e-15 | 81.6 |
| MS.gene82573.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 201 | 309 | 9.22e-15 | 79.0 |
| MS.gene82573.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 258 | 366 | 9.71e-15 | 79.0 |
| MS.gene82573.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 244 | 352 | 9.79e-15 | 79.0 |
| MS.gene82573.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 203 | 311 | 1.02e-14 | 78.6 |
| MS.gene82573.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 289 | 397 | 1.19e-14 | 78.6 |
| MS.gene82573.t1 | AT1G53590 | 34.545 | 110 | 67 | 2 | 619 | 724 | 288 | 396 | 1.57e-13 | 75.1 |
| MS.gene82573.t1 | AT1G53590 | 27.203 | 261 | 160 | 13 | 31 | 273 | 6 | 254 | 1.48e-11 | 68.6 |
Find 204 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCCTCTTCTGCATTTC+TGG | 0.020626 | 6.3:-78684785 | None:intergenic |
| TCCTCTTGCACTTGCTGTTT+GGG | 0.181803 | 6.3:+78679549 | MS.gene82573:CDS |
| ACCTCTTCAAGGTGTGAAAA+AGG | 0.223893 | 6.3:+78684730 | MS.gene82573:CDS |
| ATCTCACCTGGCTAGGAATT+TGG | 0.243430 | 6.3:-78684841 | None:intergenic |
| TTCCTCTTGCACTTGCTGTT+TGG | 0.250842 | 6.3:+78679548 | MS.gene82573:CDS |
| TTTCAGCCAATAAACTTTCT+AGG | 0.254512 | 6.3:+78682391 | MS.gene82573:CDS |
| TGGTAGTGCCCAAGTAAATT+TGG | 0.259804 | 6.3:+78683670 | MS.gene82573:CDS |
| CTCTCGAAAGAGTGCGTTCC+GGG | 0.260212 | 6.3:+78683732 | MS.gene82573:CDS |
| AACACACCATTGATCCTTCT+TGG | 0.267291 | 6.3:-78683793 | None:intergenic |
| AGTGGCCCGGTGTTTCTTCT+TGG | 0.278181 | 6.3:+78681903 | MS.gene82573:CDS |
| GTCTGATTCCAAACAGGATT+TGG | 0.285225 | 6.3:-78683566 | None:intergenic |
| TTACAAGAAATCTTGGTTTC+CGG | 0.287505 | 6.3:-78681163 | None:intergenic |
| TCTAGGAAGTTGTGAAATTA+AGG | 0.289570 | 6.3:+78682662 | MS.gene82573:CDS |
| ATGGGATGCACCGTTTAATA+TGG | 0.293962 | 6.3:+78682566 | MS.gene82573:CDS |
| CCATATTGCAATTTAATGTA+TGG | 0.314578 | 6.3:-78683431 | None:intergenic |
| GGAACTCCTAGAAAGTTTAT+TGG | 0.317094 | 6.3:-78682397 | None:intergenic |
| CCAGTCCTTCCAAATTTACT+TGG | 0.320537 | 6.3:-78683679 | None:intergenic |
| TTCAGAATGTCTTCTGCTTA+AGG | 0.324131 | 6.3:-78685628 | None:intergenic |
| TTCGATAATGACCAGGGTTC+AGG | 0.342828 | 6.3:+78684240 | MS.gene82573:intron |
| CACTTATCAGCCATCTGGTT+TGG | 0.344118 | 6.3:-78684704 | None:intergenic |
| TGGGCAATAGGACCAGATTC+CGG | 0.349699 | 6.3:+78683050 | MS.gene82573:CDS |
| CCATACATTAAATTGCAATA+TGG | 0.350240 | 6.3:+78683431 | MS.gene82573:CDS |
| TGCTGTTTGGGCTACTATAC+AGG | 0.355018 | 6.3:+78679561 | MS.gene82573:CDS |
| GGGCAATAGGACCAGATTCC+GGG | 0.357507 | 6.3:+78683051 | MS.gene82573:CDS |
| CCAGAGTTGGCACCCTCAAA+TGG | 0.360206 | 6.3:-78683125 | None:intergenic |
| GCACAAGTGATCCATATGTT+AGG | 0.369223 | 6.3:+78684331 | MS.gene82573:CDS |
| GCTTCTTCTCAGCAAGATAA+AGG | 0.369968 | 6.3:+78685566 | MS.gene82573:CDS |
| GTGACTGCTGAGAGTTGTTT+CGG | 0.370904 | 6.3:-78683301 | None:intergenic |
| GCCCGGTGTTTCTTCTTGGC+TGG | 0.374401 | 6.3:+78681907 | MS.gene82573:CDS |
| ATTAAACGGTGCATCCCATC+TGG | 0.374963 | 6.3:-78682562 | None:intergenic |
| CTCATACTCCAAATCCTGTT+TGG | 0.378242 | 6.3:+78683558 | MS.gene82573:CDS |
| TTGCCTCCTAGATGCTTTGA+AGG | 0.378640 | 6.3:-78682418 | None:intergenic |
| AACTCTCAGCAGTCACTTAA+CGG | 0.382207 | 6.3:+78683308 | MS.gene82573:CDS |
| ATAGAACTTGTTCTGATTGA+AGG | 0.383494 | 6.3:+78684279 | MS.gene82573:CDS |
| TAGTCACACTTCACATTGTT+GGG | 0.384351 | 6.3:-78682639 | None:intergenic |
| ATCAAAGGACTTCCATCATC+AGG | 0.388943 | 6.3:-78684602 | None:intergenic |
| AAGCTTGGGGTTAAAATAGT+TGG | 0.389425 | 6.3:-78680831 | None:intergenic |
| CTAGGGTCTGGTTCCATTGA+GGG | 0.391061 | 6.3:-78684574 | None:intergenic |
| AATGCAGAAGAGGCAAAGTA+TGG | 0.391593 | 6.3:+78684790 | MS.gene82573:CDS |
| CCATTTGAGGGTGCCAACTC+TGG | 0.399069 | 6.3:+78683125 | MS.gene82573:CDS |
| ATAAACTGTTGACAGAAATC+TGG | 0.405065 | 6.3:+78680807 | MS.gene82573:CDS |
| AACAGATGATGATCAAGTTT+AGG | 0.410466 | 6.3:+78685433 | MS.gene82573:CDS |
| GAAGCAAAATGCTCATTTCA+TGG | 0.412459 | 6.3:-78681610 | None:intergenic |
| TCAACAATAATGTGGGCAAT+AGG | 0.413814 | 6.3:+78683038 | MS.gene82573:CDS |
| CCTCCTAGCTTGGCCTTACA+AGG | 0.414305 | 6.3:+78681343 | MS.gene82573:CDS |
| AATGACCAGGGTTCAGGCTC+AGG | 0.421962 | 6.3:+78684246 | MS.gene82573:intron |
| ACCCAAGCAATCAAAACAAC+TGG | 0.423199 | 6.3:-78679490 | None:intergenic |
| TCAAATATTCAGTTAAGAAC+CGG | 0.423889 | 6.3:+78683335 | MS.gene82573:CDS |
| GATAACCTTGATGAAAGCTT+GGG | 0.426526 | 6.3:-78680845 | None:intergenic |
| CCATAGTGTACCCTAACATA+TGG | 0.427638 | 6.3:-78684342 | None:intergenic |
| AATTTGGAAGGACTGGTTGA+TGG | 0.427955 | 6.3:+78683686 | MS.gene82573:CDS |
| TTTGCTATAACCCCGGAATC+TGG | 0.428084 | 6.3:-78683062 | None:intergenic |
| ATTCGTGCAGTTCCCATCAA+TGG | 0.433397 | 6.3:-78681650 | None:intergenic |
| CCATATGTTAGGGTACACTA+TGG | 0.435681 | 6.3:+78684342 | MS.gene82573:CDS |
| TGGATCATGCCCTCCTAGCT+TGG | 0.436797 | 6.3:+78681333 | MS.gene82573:CDS |
| ATGTAGGTAGTAACGCATTA+TGG | 0.437857 | 6.3:-78684640 | None:intergenic |
| CTTAAAATAACTGTTGTAGA+AGG | 0.438546 | 6.3:+78683365 | MS.gene82573:CDS |
| TATTAATAGTCTTCATATCA+AGG | 0.438753 | 6.3:+78681676 | MS.gene82573:CDS |
| ACACCGGGCCACTCGGTAGC+TGG | 0.439847 | 6.3:-78681893 | None:intergenic |
| AGCTTGGGGTTAAAATAGTT+GGG | 0.439988 | 6.3:-78680830 | None:intergenic |
| CTCAGCAAGATAAAGGAACT+TGG | 0.444109 | 6.3:+78685573 | MS.gene82573:CDS |
| TGGAGGACTTGGATAAGAAA+TGG | 0.444139 | 6.3:+78680648 | MS.gene82573:CDS |
| ATCGAAGATGGAAATCTTGA+AGG | 0.445397 | 6.3:+78685462 | MS.gene82573:CDS |
| CAGGGTTCAGGCTCAGGAAA+TGG | 0.446550 | 6.3:+78684252 | MS.gene82573:intron |
| ATAGTCACACTTCACATTGT+TGG | 0.448368 | 6.3:-78682640 | None:intergenic |
| TGGATCAACCAATGGTTCTT+CGG | 0.448799 | 6.3:+78682446 | MS.gene82573:CDS |
| GTGAGAGTTGGAGTTGCCTT+TGG | 0.449806 | 6.3:+78681848 | MS.gene82573:CDS |
| TGGTGTAATTTACTCAAAGA+AGG | 0.451877 | 6.3:-78684821 | None:intergenic |
| AGTGCTCTTCCATCTAAAAT+CGG | 0.452353 | 6.3:-78681797 | None:intergenic |
| ATGGATCAGTCAGGGATGTA+TGG | 0.453137 | 6.3:+78683705 | MS.gene82573:CDS |
| GAGGAGAACCGATGTCAGAC+TGG | 0.453869 | 6.3:+78682530 | MS.gene82573:CDS |
| ATGGTCAACTATCGGCGATC+AGG | 0.455061 | 6.3:+78681372 | MS.gene82573:CDS |
| TCATGCAAAACCATATTAAA+CGG | 0.459628 | 6.3:-78682576 | None:intergenic |
| TTGTGGAGATGAAATTGAAA+TGG | 0.461121 | 6.3:+78683097 | MS.gene82573:CDS |
| GAGAAGAATTAATGATCTCT+TGG | 0.464473 | 6.3:-78685596 | None:intergenic |
| TCTAGGCACGTTTGAAGCTC+CGG | 0.465326 | 6.3:+78681144 | MS.gene82573:intron |
| TAAGCTTGCGAAGCCATTGA+TGG | 0.465366 | 6.3:+78681637 | MS.gene82573:CDS |
| CAAACTACTTGTGGAGGACT+TGG | 0.465961 | 6.3:+78680637 | MS.gene82573:CDS |
| TTCCATCATCAGGGAACTCT+AGG | 0.466047 | 6.3:-78684592 | None:intergenic |
| TGATAACCTTGATGAAAGCT+TGG | 0.466050 | 6.3:-78680846 | None:intergenic |
| GTATCCACTTATCAGCCATC+TGG | 0.470024 | 6.3:-78684709 | None:intergenic |
| CCTCTCGAAAGAGTGCGTTC+CGG | 0.475339 | 6.3:+78683731 | MS.gene82573:CDS |
| TCAATCGTCTGATTCCAAAC+AGG | 0.479100 | 6.3:-78683572 | None:intergenic |
| TCCTTTGATGCTTTATGTGA+AGG | 0.479609 | 6.3:+78684616 | MS.gene82573:CDS |
| ACGATTGAATTTGACGAGGT+TGG | 0.481117 | 6.3:+78683587 | MS.gene82573:CDS |
| TGACCATCTCATCCCTTGTA+AGG | 0.481520 | 6.3:-78681356 | None:intergenic |
| ACCCTAGAGTTCCCTGATGA+TGG | 0.482730 | 6.3:+78684590 | MS.gene82573:CDS |
| TTATCAGCCATCTGGTTTGG+AGG | 0.483822 | 6.3:-78684701 | None:intergenic |
| ATTGAATTTGACGAGGTTGG+TGG | 0.484127 | 6.3:+78683590 | MS.gene82573:CDS |
| CCAAGTAAATTTGGAAGGAC+TGG | 0.484300 | 6.3:+78683679 | MS.gene82573:CDS |
| ATTTGTAGAGGTAGAAATTG+AGG | 0.485231 | 6.3:+78682500 | MS.gene82573:CDS |
| CACCATTGGAGCACTGTGAA+TGG | 0.486631 | 6.3:+78680780 | MS.gene82573:CDS |
| GTTGGAGTTGCCTTTGGAAG+CGG | 0.486786 | 6.3:+78681854 | MS.gene82573:CDS |
| ACAAAACTCTAACCCCTCAA+TGG | 0.492964 | 6.3:+78684561 | MS.gene82573:CDS |
| CATCAGGGAACTCTAGGGTC+TGG | 0.493217 | 6.3:-78684586 | None:intergenic |
| GACTGGTTGATGGATCAGTC+AGG | 0.494486 | 6.3:+78683696 | MS.gene82573:CDS |
| TCTAGGGTCTGGTTCCATTG+AGG | 0.494707 | 6.3:-78684575 | None:intergenic |
| TGCTTGCTTTGCTATAACCC+CGG | 0.495826 | 6.3:-78683069 | None:intergenic |
| TATATAGCCCATCACACCAT+TGG | 0.498640 | 6.3:+78680766 | MS.gene82573:intron |
| GCCCAAACAGCAAGTGCAAG+AGG | 0.503028 | 6.3:-78679550 | None:intergenic |
| TTCAATTGATAGTATTGAAG+AGG | 0.504507 | 6.3:+78679408 | MS.gene82573:CDS |
| TTTAGGTCTCAAATCGAAGA+TGG | 0.504600 | 6.3:+78685450 | MS.gene82573:CDS |
| CTTCCAGCTACCGAGTGGCC+CGG | 0.508428 | 6.3:+78681890 | MS.gene82573:CDS |
| ACTTGTTCTGATTGAAGGGA+GGG | 0.509206 | 6.3:+78684284 | MS.gene82573:CDS |
| TAAAATAGAAGCCATAAAAG+TGG | 0.509234 | 6.3:+78683766 | MS.gene82573:CDS |
| AAGGAAAATCTCACCTGGCT+AGG | 0.510015 | 6.3:-78684848 | None:intergenic |
| CACAAGTGATCCATATGTTA+GGG | 0.511301 | 6.3:+78684332 | MS.gene82573:CDS |
| TTACTACCTACATCAAGTAT+AGG | 0.513003 | 6.3:+78684650 | MS.gene82573:CDS |
| AACGTCTTCCGAAGAACCAT+TGG | 0.515459 | 6.3:-78682454 | None:intergenic |
| CAGAGTTGGCACCCTCAAAT+GGG | 0.516145 | 6.3:-78683124 | None:intergenic |
| CAAACCAGATGGCTGATAAG+TGG | 0.520171 | 6.3:+78684705 | MS.gene82573:CDS |
| GAATTTGACGAGGTTGGTGG+CGG | 0.522985 | 6.3:+78683593 | MS.gene82573:CDS |
| ATTACACCAAATTCCTAGCC+AGG | 0.524902 | 6.3:+78684835 | MS.gene82573:CDS |
| GAAATGGTTGTCCCATTTGA+GGG | 0.525655 | 6.3:+78683113 | MS.gene82573:CDS |
| AATAACTGTTGTAGAAGGAA+AGG | 0.529513 | 6.3:+78683370 | MS.gene82573:CDS |
| GGAGTTGCCTTTGGAAGCGG+TGG | 0.531014 | 6.3:+78681857 | MS.gene82573:CDS |
| AAGTTCCAGAAATGCAGAAG+AGG | 0.531109 | 6.3:+78684780 | MS.gene82573:CDS |
| GATAAGTGGATACCTCTTCA+AGG | 0.532440 | 6.3:+78684719 | MS.gene82573:CDS |
| TTCATCTCCGAAAAGTTCCT+CGG | 0.534068 | 6.3:-78683642 | None:intergenic |
| TGAAATGGTTGTCCCATTTG+AGG | 0.535808 | 6.3:+78683112 | MS.gene82573:CDS |
| TAGAACTTGTTCTGATTGAA+GGG | 0.536589 | 6.3:+78684280 | MS.gene82573:CDS |
| GGAGTTCCTTCAAAGCATCT+AGG | 0.536894 | 6.3:+78682412 | MS.gene82573:CDS |
| CAGTGCTCCAATGGTGTGAT+GGG | 0.541796 | 6.3:-78680773 | None:intergenic |
| CACCAGCCAAGAAGAAACAC+CGG | 0.542319 | 6.3:-78681909 | None:intergenic |
| ACAGTGCTCCAATGGTGTGA+TGG | 0.543090 | 6.3:-78680774 | None:intergenic |
| CTTGTAAGGCCAAGCTAGGA+GGG | 0.545845 | 6.3:-78681342 | None:intergenic |
| ATCACTTGTGCCTCTGAGAT+CGG | 0.550679 | 6.3:-78684319 | None:intergenic |
| TTACAGCGAGTTATGCAACT+TGG | 0.552195 | 6.3:+78681572 | MS.gene82573:intron |
| TAGGGTCTGGTTCCATTGAG+GGG | 0.552252 | 6.3:-78684573 | None:intergenic |
| GGATGACCAAGAAGGATCAA+TGG | 0.555290 | 6.3:+78683787 | MS.gene82573:CDS |
| AGCCATTCACAGTGCTCCAA+TGG | 0.557688 | 6.3:-78680782 | None:intergenic |
| ACCAGCCAAGAAGAAACACC+GGG | 0.560295 | 6.3:-78681908 | None:intergenic |
| ATTAATAGTCTTCATATCAA+GGG | 0.560450 | 6.3:+78681677 | MS.gene82573:CDS |
| CTACCTCTACAAATGTATGT+AGG | 0.562256 | 6.3:-78682491 | None:intergenic |
| AAGCAAAATGCTCATTTCAT+GGG | 0.563579 | 6.3:-78681609 | None:intergenic |
| CAGTCCTTCCAAATTTACTT+GGG | 0.564700 | 6.3:-78683678 | None:intergenic |
| TCAGCTCCTGAGGTGAGAGT+TGG | 0.566088 | 6.3:+78681836 | MS.gene82573:CDS |
| TAGAGTTTCTAGCTCACTCA+AGG | 0.566537 | 6.3:-78685496 | None:intergenic |
| AAGATGACTCAACAATAATG+TGG | 0.566923 | 6.3:+78683030 | MS.gene82573:CDS |
| TTAACCCCAAGCTTTCATCA+AGG | 0.567320 | 6.3:+78680840 | MS.gene82573:CDS |
| GCAACTCCAACTCTCACCTC+AGG | 0.567514 | 6.3:-78681842 | None:intergenic |
| ATATAGTACCTCTCCAGAGT+TGG | 0.567676 | 6.3:-78683138 | None:intergenic |
| CATTAAATTGCAATATGGAA+AGG | 0.567822 | 6.3:+78683436 | MS.gene82573:CDS |
| AGAAGAAACACCGGGCCACT+CGG | 0.570094 | 6.3:-78681900 | None:intergenic |
| CCTTGTAAGGCCAAGCTAGG+AGG | 0.570679 | 6.3:-78681343 | None:intergenic |
| ATATCAACGCAAACTACTTG+TGG | 0.570681 | 6.3:+78680628 | MS.gene82573:CDS |
| GTTCAGGCTCAGGAAATGGT+TGG | 0.572394 | 6.3:+78684256 | MS.gene82573:CDS |
| GAATGTCTTCTGCTTAAGGA+AGG | 0.575240 | 6.3:-78685624 | None:intergenic |
| TCGTCGTCGCGGCTCCACCA+TGG | 0.575472 | 6.3:-78682301 | None:intergenic |
| AAGCTTGCGAAGCCATTGAT+GGG | 0.576225 | 6.3:+78681638 | MS.gene82573:CDS |
| TCCTTCACATAAAGCATCAA+AGG | 0.577767 | 6.3:-78684617 | None:intergenic |
| TGGCCTTACAAGGGATGAGA+TGG | 0.577839 | 6.3:+78681353 | MS.gene82573:CDS |
| CATTCACCTATACTTGATGT+AGG | 0.582110 | 6.3:-78684656 | None:intergenic |
| ACTGGGTTCAACTCCCAGAT+GGG | 0.583518 | 6.3:+78682548 | MS.gene82573:CDS |
| CTCCTAGCTTGGCCTTACAA+GGG | 0.587231 | 6.3:+78681344 | MS.gene82573:CDS |
| CTGACTCCCACCGCTTCCAA+AGG | 0.592548 | 6.3:-78681864 | None:intergenic |
| TTCGTTTGTATCAGCTCCTG+AGG | 0.594024 | 6.3:+78681826 | MS.gene82573:CDS |
| GACTGGGTTCAACTCCCAGA+TGG | 0.594097 | 6.3:+78682547 | MS.gene82573:CDS |
| AACTTGTTCTGATTGAAGGG+AGG | 0.594772 | 6.3:+78684283 | MS.gene82573:CDS |
| AATGTGAAGTGTGACTATCT+AGG | 0.596257 | 6.3:+78682645 | MS.gene82573:CDS |
| GGGATGAGATGGTCAACTAT+CGG | 0.600420 | 6.3:+78681364 | MS.gene82573:CDS |
| ATCCCTTGTAAGGCCAAGCT+AGG | 0.602403 | 6.3:-78681346 | None:intergenic |
| GAGTTGCCTTTGGAAGCGGT+GGG | 0.609469 | 6.3:+78681858 | MS.gene82573:CDS |
| AGGAGAACCGATGTCAGACT+GGG | 0.609692 | 6.3:+78682531 | MS.gene82573:CDS |
| TAGTATTGAAGAGGTTGCTG+TGG | 0.612031 | 6.3:+78679417 | MS.gene82573:CDS |
| AGATGACTCAACAATAATGT+GGG | 0.612110 | 6.3:+78683031 | MS.gene82573:CDS |
| ACTCTAGAGGATACACAAGA+AGG | 0.617271 | 6.3:+78685513 | MS.gene82573:CDS |
| GGACACTTTGGTTAAAACCA+TGG | 0.620664 | 6.3:+78682284 | MS.gene82573:CDS |
| TGAGCATTCTAGTGAAAGAG+TGG | 0.621454 | 6.3:+78683243 | MS.gene82573:CDS |
| TCCATCATCAGGGAACTCTA+GGG | 0.621732 | 6.3:-78684591 | None:intergenic |
| TTAAACGGTGCATCCCATCT+GGG | 0.624676 | 6.3:-78682561 | None:intergenic |
| TAGAAATTGAGGAATTGACG+AGG | 0.625432 | 6.3:+78682511 | MS.gene82573:CDS |
| TCAAAGGACTTCCATCATCA+GGG | 0.626540 | 6.3:-78684601 | None:intergenic |
| AAGGTTGCCTCCAAACCAGA+TGG | 0.627979 | 6.3:+78684694 | MS.gene82573:CDS |
| AATGTGTTGTAGAATATCAA+AGG | 0.628027 | 6.3:+78684675 | MS.gene82573:CDS |
| CAACAAAGTGGATCAACCAA+TGG | 0.632764 | 6.3:+78682438 | MS.gene82573:CDS |
| CCGGAACGCACTCTTTCGAG+AGG | 0.634855 | 6.3:-78683731 | None:intergenic |
| AGTTGAACCCAGTCTGACAT+CGG | 0.634963 | 6.3:-78682538 | None:intergenic |
| AGTGCCCAAGTAAATTTGGA+AGG | 0.635986 | 6.3:+78683674 | MS.gene82573:CDS |
| GCGAATCATATTGAATAACT+CGG | 0.638317 | 6.3:+78680673 | MS.gene82573:CDS |
| ATAAAAGTGGATGACCAAGA+AGG | 0.639601 | 6.3:+78683779 | MS.gene82573:CDS |
| ACTGGTTGATGGATCAGTCA+GGG | 0.640664 | 6.3:+78683697 | MS.gene82573:CDS |
| TCAACGCAAACTACTTGTGG+AGG | 0.644633 | 6.3:+78680631 | MS.gene82573:CDS |
| GGACCTACATACATTTGTAG+AGG | 0.649209 | 6.3:+78682488 | MS.gene82573:CDS |
| CTTGTTGCCGCCGATCTCAG+AGG | 0.650591 | 6.3:+78684309 | MS.gene82573:CDS |
| ATATGTAGCTCAGCTAGAGA+CGG | 0.654878 | 6.3:+78685536 | MS.gene82573:CDS |
| CACTTTGGTTAAAACCATGG+TGG | 0.655161 | 6.3:+78682287 | MS.gene82573:CDS |
| ATAACCTTGATGAAAGCTTG+GGG | 0.660235 | 6.3:-78680844 | None:intergenic |
| TCTCGAAAGAGTGCGTTCCG+GGG | 0.662685 | 6.3:+78683733 | MS.gene82573:CDS |
| GGCAATAGGACCAGATTCCG+GGG | 0.664051 | 6.3:+78683052 | MS.gene82573:CDS |
| TGAGGGTGCCAACTCTGGAG+AGG | 0.665513 | 6.3:+78683130 | MS.gene82573:CDS |
| AAACTTCAAGAAAAGAACAA+AGG | 0.670892 | 6.3:+78684365 | MS.gene82573:CDS |
| GGAAGACGTTTCTGACGACA+AGG | 0.672222 | 6.3:+78682467 | MS.gene82573:CDS |
| GCATCTAGGAGGCAACAAAG+TGG | 0.674958 | 6.3:+78682426 | MS.gene82573:CDS |
| GAGTGAGCTAGAAACTCTAG+AGG | 0.676655 | 6.3:+78685500 | MS.gene82573:CDS |
| GTTCCTTCAAAGCATCTAGG+AGG | 0.687665 | 6.3:+78682415 | MS.gene82573:CDS |
| CTTCTGCTTAAGGAAGGAGA+AGG | 0.688266 | 6.3:-78685618 | None:intergenic |
| AAAACTAAAAGTATTTACCG+AGG | 0.690759 | 6.3:+78683625 | MS.gene82573:CDS |
| AGAGTGAAACATCGTCGTCG+CGG | 0.704416 | 6.3:-78682312 | None:intergenic |
| AAGGTTATCAGCTATAGTTG+AGG | 0.707519 | 6.3:+78680859 | MS.gene82573:CDS |
| TCAGACGATTGAATTTGACG+AGG | 0.710813 | 6.3:+78683583 | MS.gene82573:CDS |
| AGTCACTTCCAGCTACCGAG+TGG | 0.722155 | 6.3:+78681885 | MS.gene82573:CDS |
| ACTTGTGCCTCTGAGATCGG+CGG | 0.725503 | 6.3:-78684316 | None:intergenic |
| AAGTGCAAGAGGAACCCAAG+TGG | 0.732154 | 6.3:-78679539 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTAATATTATATTTGT+AGG | + | chr6.3:78681942-78681961 | MS.gene82573:intron | 10.0% |
| !! | TTATCTTAATATATTTACTT+TGG | + | chr6.3:78679635-78679654 | MS.gene82573:intron | 10.0% |
| !!! | ATTGATTCTTTTATTTATTT+AGG | + | chr6.3:78683832-78683851 | MS.gene82573:intron | 10.0% |
| !! | AAATAAGTAAAAATCCAATT+TGG | - | chr6.3:78680180-78680199 | None:intergenic | 15.0% |
| !! | AGTATAAATAGAAATATCTT+CGG | - | chr6.3:78684879-78684898 | None:intergenic | 15.0% |
| !! | ATAATTTCATTTATCAAGTT+AGG | + | chr6.3:78682117-78682136 | MS.gene82573:intron | 15.0% |
| !! | TTTCCTTCAAAAAAAAAAAA+GGG | + | chr6.3:78680098-78680117 | MS.gene82573:intron | 15.0% |
| !!! | TAATTTATCTTTTCTTTTTG+CGG | + | chr6.3:78681120-78681139 | MS.gene82573:intron | 15.0% |
| !!! | TAGCTTTTATTTGTTATTTT+TGG | + | chr6.3:78680963-78680982 | MS.gene82573:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+TGG | + | chr6.3:78679913-78679932 | MS.gene82573:intron | 15.0% |
| !! | AATGATTGATTAATAGAGTA+AGG | - | chr6.3:78679603-78679622 | None:intergenic | 20.0% |
| !! | AGAAATAAGTGTTTAATTGA+AGG | + | chr6.3:78680304-78680323 | MS.gene82573:intron | 20.0% |
| !! | AGAATAAAAAAATATCTCGA+AGG | + | chr6.3:78685316-78685335 | MS.gene82573:intron | 20.0% |
| !! | ATATATATCAAAACTCCAAA+GGG | - | chr6.3:78680395-78680414 | None:intergenic | 20.0% |
| !! | ATTAATAGTCTTCATATCAA+GGG | + | chr6.3:78681677-78681696 | MS.gene82573:CDS | 20.0% |
| !! | ATTACAACAAACTAACTTAT+TGG | - | chr6.3:78685012-78685031 | None:intergenic | 20.0% |
| !! | CAACTTCATATAAAGAAAAT+TGG | - | chr6.3:78680731-78680750 | None:intergenic | 20.0% |
| !! | CTTATCATAGTATAAAAACA+TGG | - | chr6.3:78682974-78682993 | None:intergenic | 20.0% |
| !! | CTTTCCTTCAAAAAAAAAAA+AGG | + | chr6.3:78680097-78680116 | MS.gene82573:intron | 20.0% |
| !! | GAAAAGAAAAAGAAACTTAA+AGG | - | chr6.3:78685042-78685061 | None:intergenic | 20.0% |
| !! | GAATAAAAAAATATCTCGAA+GGG | + | chr6.3:78685317-78685336 | MS.gene82573:intron | 20.0% |
| !! | GAATCATAGTTATCAAATAT+TGG | + | chr6.3:78680985-78681004 | MS.gene82573:intron | 20.0% |
| !! | TATTAATAGTCTTCATATCA+AGG | + | chr6.3:78681676-78681695 | MS.gene82573:CDS | 20.0% |
| !! | TCCAATAAAAATCACTTATA+TGG | - | chr6.3:78685234-78685253 | None:intergenic | 20.0% |
| !! | TCTATCATAGTATCTAAATT+TGG | - | chr6.3:78684402-78684421 | None:intergenic | 20.0% |
| !! | TTATTTATTTAGGCTCTATT+TGG | + | chr6.3:78683842-78683861 | MS.gene82573:intron | 20.0% |
| !! | TTCCTTCAAAAAAAAAAAAG+GGG | + | chr6.3:78680099-78680118 | MS.gene82573:intron | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | + | chr6.3:78683999-78684018 | MS.gene82573:intron | 20.0% |
| !!! | AATATTGGAAGACTTATTTT+TGG | + | chr6.3:78681000-78681019 | MS.gene82573:intron | 20.0% |
| !!! | AGTTATTTTAAGTTTCTTTC+CGG | - | chr6.3:78683357-78683376 | None:intergenic | 20.0% |
| !!! | ATGTGATCTTCATTATTTTT+AGG | + | chr6.3:78684968-78684987 | MS.gene82573:intron | 20.0% |
| !!! | GTTGTTTAATTTTTCAGTAT+GGG | + | chr6.3:78680603-78680622 | MS.gene82573:intron | 20.0% |
| !!! | TAAAATGCATTCATTGTTTT+TGG | + | chr6.3:78679694-78679713 | MS.gene82573:intron | 20.0% |
| !!! | TGTTGTTTAATTTTTCAGTA+TGG | + | chr6.3:78680602-78680621 | MS.gene82573:intron | 20.0% |
| !!! | TTTTGGAGTTTTGTTAAATT+GGG | + | chr6.3:78679711-78679730 | MS.gene82573:intron | 20.0% |
| !!! | TTTTTGGAGTTTTGTTAAAT+TGG | + | chr6.3:78679710-78679729 | MS.gene82573:intron | 20.0% |
| ! | AAAACAACTGGAATGAAAAA+TGG | - | chr6.3:78679481-78679500 | None:intergenic | 25.0% |
| ! | AAAACTAAATTGACCAACAA+AGG | - | chr6.3:78679670-78679689 | None:intergenic | 25.0% |
| ! | AAACTTCAAGAAAAGAACAA+AGG | + | chr6.3:78684365-78684384 | MS.gene82573:CDS | 25.0% |
| ! | AACTACAACAAGTAAAAACA+AGG | - | chr6.3:78680905-78680924 | None:intergenic | 25.0% |
| ! | AATGTGTTGTAGAATATCAA+AGG | + | chr6.3:78684675-78684694 | MS.gene82573:CDS | 25.0% |
| ! | AGTAAAAACAAGGAGAATAA+CGG | - | chr6.3:78680895-78680914 | None:intergenic | 25.0% |
| ! | CAGATAATAGTTTAAGAACA+TGG | + | chr6.3:78680483-78680502 | MS.gene82573:intron | 25.0% |
| ! | CATATATATCAAAACTCCAA+AGG | - | chr6.3:78680396-78680415 | None:intergenic | 25.0% |
| ! | CATTAAATTGCAATATGGAA+AGG | + | chr6.3:78683436-78683455 | MS.gene82573:CDS | 25.0% |
| ! | CCATACATTAAATTGCAATA+TGG | + | chr6.3:78683431-78683450 | MS.gene82573:CDS | 25.0% |
| ! | CCATATTGCAATTTAATGTA+TGG | - | chr6.3:78683434-78683453 | None:intergenic | 25.0% |
| ! | CTCAAAAGTAGAATATCAAA+AGG | - | chr6.3:78682693-78682712 | None:intergenic | 25.0% |
| ! | CTTAAAATAACTGTTGTAGA+AGG | + | chr6.3:78683365-78683384 | MS.gene82573:CDS | 25.0% |
| ! | TAAAATAGAAGCCATAAAAG+TGG | + | chr6.3:78683766-78683785 | MS.gene82573:CDS | 25.0% |
| ! | TCAAATAAGCTAATCCAAAT+TGG | + | chr6.3:78684089-78684108 | MS.gene82573:intron | 25.0% |
| ! | TCAAATATTCAGTTAAGAAC+CGG | + | chr6.3:78683335-78683354 | MS.gene82573:CDS | 25.0% |
| ! | TCATGCAAAACCATATTAAA+CGG | - | chr6.3:78682579-78682598 | None:intergenic | 25.0% |
| ! | TCCTTCAAAAAAAAAAAAGG+GGG | + | chr6.3:78680100-78680119 | MS.gene82573:intron | 25.0% |
| ! | TCTCAAATTATTAATGGTGT+TGG | + | chr6.3:78679919-78679938 | MS.gene82573:intron | 25.0% |
| ! | TTTCATAGATGATGAATGTT+TGG | + | chr6.3:78681244-78681263 | MS.gene82573:intron | 25.0% |
| ! | TTTCTATGACAAGAGATAAA+AGG | + | chr6.3:78683934-78683953 | MS.gene82573:intron | 25.0% |
| !! | ACGAATCTGATTAACATTTT+GGG | - | chr6.3:78679834-78679853 | None:intergenic | 25.0% |
| !! | ATTTGATAACATATGTAGAC+AGG | + | chr6.3:78680066-78680085 | MS.gene82573:intron | 25.0% |
| !! | CACTTTTACTTACTCTATTA+TGG | + | chr6.3:78684175-78684194 | MS.gene82573:intron | 25.0% |
| !! | CATGAAAATTCTTTTCTTTG+AGG | + | chr6.3:78679741-78679760 | MS.gene82573:intron | 25.0% |
| !! | CTGTTCTTCATAATATTTTC+AGG | + | chr6.3:78683514-78683533 | MS.gene82573:intron | 25.0% |
| !! | GAATTTGTAAAAAAGTACAG+TGG | + | chr6.3:78685252-78685271 | MS.gene82573:intron | 25.0% |
| !! | GCCATATAAGTGATTTTTAT+TGG | + | chr6.3:78685230-78685249 | MS.gene82573:intron | 25.0% |
| !! | GTTTTACTTACAAGAAATCT+TGG | - | chr6.3:78681173-78681192 | None:intergenic | 25.0% |
| !! | TAAACACTTATTTCTCCAAT+TGG | - | chr6.3:78680299-78680318 | None:intergenic | 25.0% |
| !! | TATGTAGGAAAAACTTTTCA+CGG | + | chr6.3:78682263-78682282 | MS.gene82573:intron | 25.0% |
| !! | TCTATACTTTCTAGTGATAT+TGG | + | chr6.3:78681484-78681503 | MS.gene82573:intron | 25.0% |
| !! | TTCAATTGATAGTATTGAAG+AGG | + | chr6.3:78679408-78679427 | MS.gene82573:CDS | 25.0% |
| !! | TTTGATAACATATGTAGACA+GGG | + | chr6.3:78680067-78680086 | MS.gene82573:intron | 25.0% |
| !! | TTTTGCAATAATGCCAATAT+AGG | - | chr6.3:78679798-78679817 | None:intergenic | 25.0% |
| !! | TTTTTATTCAGCAAACAACA+CGG | + | chr6.3:78680929-78680948 | MS.gene82573:intron | 25.0% |
| !!! | AAAACTAAAAGTATTTACCG+AGG | + | chr6.3:78683625-78683644 | MS.gene82573:CDS | 25.0% |
| !!! | AAATGTTGGTGCTATATATA+AGG | + | chr6.3:78680563-78680582 | MS.gene82573:intron | 25.0% |
| !!! | AAGAAAATTGGTAATGTCAT+AGG | - | chr6.3:78680719-78680738 | None:intergenic | 25.0% |
| !!! | TGCTGTTGATTTAAGAAAAA+AGG | + | chr6.3:78682338-78682357 | MS.gene82573:CDS | 25.0% |
| !!! | TGTTGATTTAAGAAAAAAGG+CGG | + | chr6.3:78682341-78682360 | MS.gene82573:CDS | 25.0% |
| !!! | TTTGGAGTTTTGTTAAATTG+GGG | + | chr6.3:78679712-78679731 | MS.gene82573:intron | 25.0% |
| !!! | TTTTTTCTTAAATCAACAGC+AGG | - | chr6.3:78682339-78682358 | None:intergenic | 25.0% |
| AAAACAACAATGTGCACATT+TGG | - | chr6.3:78685086-78685105 | None:intergenic | 30.0% | |
| AAAATCACTTATATGGCTAC+TGG | - | chr6.3:78685227-78685246 | None:intergenic | 30.0% | |
| AAATACTCAATTTGTAGGAC+TGG | + | chr6.3:78679764-78679783 | MS.gene82573:intron | 30.0% | |
| AACAGATGATGATCAAGTTT+AGG | + | chr6.3:78685433-78685452 | MS.gene82573:CDS | 30.0% | |
| AACTGTAATATGAAGAGAAG+AGG | - | chr6.3:78683218-78683237 | None:intergenic | 30.0% | |
| AAGATAGTGTTGTCAAATAG+CGG | - | chr6.3:78682909-78682928 | None:intergenic | 30.0% | |
| AAGATGACTCAACAATAATG+TGG | + | chr6.3:78683030-78683049 | MS.gene82573:CDS | 30.0% | |
| AAGCAAAATGCTCATTTCAT+GGG | - | chr6.3:78681612-78681631 | None:intergenic | 30.0% | |
| AATAACTGTTGTAGAAGGAA+AGG | + | chr6.3:78683370-78683389 | MS.gene82573:CDS | 30.0% | |
| ACTCCATAAGTAAAAGAATG+AGG | - | chr6.3:78682006-78682025 | None:intergenic | 30.0% | |
| ACTGGATCAATATCCTATAT+TGG | + | chr6.3:78679782-78679801 | MS.gene82573:intron | 30.0% | |
| ACTTATTTCCATAAGCTCTT+AGG | - | chr6.3:78683986-78684005 | None:intergenic | 30.0% | |
| AGAAATATCTTCGGACATTA+AGG | - | chr6.3:78684870-78684889 | None:intergenic | 30.0% | |
| AGAGTATGTTGAATAGAATG+TGG | - | chr6.3:78681089-78681108 | None:intergenic | 30.0% | |
| AGATGACTCAACAATAATGT+GGG | + | chr6.3:78683031-78683050 | MS.gene82573:CDS | 30.0% | |
| ATAAACTGTTGACAGAAATC+TGG | + | chr6.3:78680807-78680826 | MS.gene82573:CDS | 30.0% | |
| ATTTGTAGAGGTAGAAATTG+AGG | + | chr6.3:78682500-78682519 | MS.gene82573:CDS | 30.0% | |
| CCTTTGAGTGAAGAAAAAAT+TGG | + | chr6.3:78683165-78683184 | MS.gene82573:intron | 30.0% | |
| CTAACAAGTCACATATACAA+TGG | - | chr6.3:78680203-78680222 | None:intergenic | 30.0% | |
| GAGAAGAATTAATGATCTCT+TGG | - | chr6.3:78685599-78685618 | None:intergenic | 30.0% | |
| GAGTGAAGAAAAAATTGGTA+TGG | + | chr6.3:78683170-78683189 | MS.gene82573:intron | 30.0% | |
| GATAAAGAACAACATCTACA+AGG | - | chr6.3:78680242-78680261 | None:intergenic | 30.0% | |
| GCGAATCATATTGAATAACT+CGG | + | chr6.3:78680673-78680692 | MS.gene82573:CDS | 30.0% | |
| GGAATGAAAAATGGAATCTT+TGG | - | chr6.3:78679472-78679491 | None:intergenic | 30.0% | |
| GGTAATGTCATAGGAAAAAT+AGG | - | chr6.3:78680710-78680729 | None:intergenic | 30.0% | |
| GTAAAAGAATGAGGTAGTTT+AGG | - | chr6.3:78681997-78682016 | None:intergenic | 30.0% | |
| TCTAGGAAGTTGTGAAATTA+AGG | + | chr6.3:78682662-78682681 | MS.gene82573:CDS | 30.0% | |
| TCTCTTCATATTACAGTTGA+AGG | + | chr6.3:78683220-78683239 | MS.gene82573:intron | 30.0% | |
| TGAGGAAATACTCAATTTGT+AGG | + | chr6.3:78679759-78679778 | MS.gene82573:intron | 30.0% | |
| TGGTGTAATTTACTCAAAGA+AGG | - | chr6.3:78684824-78684843 | None:intergenic | 30.0% | |
| TTACAAGAAATCTTGGTTTC+CGG | - | chr6.3:78681166-78681185 | None:intergenic | 30.0% | |
| TTACTACCTACATCAAGTAT+AGG | + | chr6.3:78684650-78684669 | MS.gene82573:CDS | 30.0% | |
| TTATGTTAGAAGAACAACGA+TGG | - | chr6.3:78681728-78681747 | None:intergenic | 30.0% | |
| TTCAAGAAAAGAACAAAGGT+TGG | + | chr6.3:78684369-78684388 | MS.gene82573:intron | 30.0% | |
| TTGTGGAGATGAAATTGAAA+TGG | + | chr6.3:78683097-78683116 | MS.gene82573:CDS | 30.0% | |
| TTTCAGCCAATAAACTTTCT+AGG | + | chr6.3:78682391-78682410 | MS.gene82573:CDS | 30.0% | |
| ! | ACTTTCTAGTGATATTGGTA+GGG | + | chr6.3:78681489-78681508 | MS.gene82573:intron | 30.0% |
| ! | AGCTGATTCTAATGATTCAA+TGG | + | chr6.3:78682094-78682113 | MS.gene82573:intron | 30.0% |
| ! | ATAGAACTTGTTCTGATTGA+AGG | + | chr6.3:78684279-78684298 | MS.gene82573:CDS | 30.0% |
| ! | CTACCTCATTCTTTTACTTA+TGG | + | chr6.3:78682000-78682019 | MS.gene82573:intron | 30.0% |
| ! | GACGAATCTGATTAACATTT+TGG | - | chr6.3:78679835-78679854 | None:intergenic | 30.0% |
| ! | GAGACTATTGACTAATGTTA+GGG | + | chr6.3:78680038-78680057 | MS.gene82573:intron | 30.0% |
| ! | GTAAAAAAGTACAGTGGTAT+TGG | + | chr6.3:78685258-78685277 | MS.gene82573:intron | 30.0% |
| ! | TACTTTCTAGTGATATTGGT+AGG | + | chr6.3:78681488-78681507 | MS.gene82573:intron | 30.0% |
| ! | TAGAACTTGTTCTGATTGAA+GGG | + | chr6.3:78684280-78684299 | MS.gene82573:CDS | 30.0% |
| ! | TCAGTTAGCTTCAAATTTAG+TGG | + | chr6.3:78680417-78680436 | MS.gene82573:intron | 30.0% |
| ! | TGAGACTATTGACTAATGTT+AGG | + | chr6.3:78680037-78680056 | MS.gene82573:intron | 30.0% |
| ! | TGGAACTCTTATTTACCAAT+TGG | + | chr6.3:78680281-78680300 | MS.gene82573:intron | 30.0% |
| ! | TGTGTTGTTATTCAGTTCAA+AGG | + | chr6.3:78684900-78684919 | MS.gene82573:intron | 30.0% |
| ! | TTCTTTTTCTTTTCCTAGCT+AGG | + | chr6.3:78685048-78685067 | MS.gene82573:intron | 30.0% |
| ! | TTGATAACATATGTAGACAG+GGG | + | chr6.3:78680068-78680087 | MS.gene82573:intron | 30.0% |
| ! | TTTCTTCAACTATGTTTTGC+AGG | + | chr6.3:78679441-78679460 | MS.gene82573:CDS | 30.0% |
| !! | ATGGTTTTGCATGATAATAC+AGG | + | chr6.3:78682585-78682604 | MS.gene82573:CDS | 30.0% |
| !! | TATTTTAAGTCTGATTTCCC+CGG | - | chr6.3:78683753-78683772 | None:intergenic | 30.0% |
| !! | TTAACATTTTGGGAGTTCAT+CGG | - | chr6.3:78679824-78679843 | None:intergenic | 30.0% |
| !!! | ACATTTTGACTATGTTGATC+TGG | + | chr6.3:78680137-78680156 | MS.gene82573:intron | 30.0% |
| !!! | ACCCCCTTTTTTTTTTTTGA+AGG | - | chr6.3:78680104-78680123 | None:intergenic | 30.0% |
| !!! | ATCTTTACACCGATTTTAGA+TGG | + | chr6.3:78681788-78681807 | MS.gene82573:CDS | 30.0% |
| !!! | CCAATTTTTTCTTCACTCAA+AGG | - | chr6.3:78683168-78683187 | None:intergenic | 30.0% |
| !!! | TATGCAACTTGGTTTTGATT+GGG | + | chr6.3:78681583-78681602 | MS.gene82573:CDS | 30.0% |
| !!! | TTATGCAACTTGGTTTTGAT+TGG | + | chr6.3:78681582-78681601 | MS.gene82573:CDS | 30.0% |
| !!! | TTCTACTTTTTCTGCTATGT+AGG | + | chr6.3:78682248-78682267 | MS.gene82573:intron | 30.0% |
| !!! | TTTTTTCATCTTGTGACCAA+AGG | - | chr6.3:78684115-78684134 | None:intergenic | 30.0% |
| AAACTAACTTATTGGACTGC+AGG | - | chr6.3:78685004-78685023 | None:intergenic | 35.0% | |
| AAGCTTGGGGTTAAAATAGT+TGG | - | chr6.3:78680834-78680853 | None:intergenic | 35.0% | |
| AAGGTTATCAGCTATAGTTG+AGG | + | chr6.3:78680859-78680878 | MS.gene82573:CDS | 35.0% | |
| AATGTGAAGTGTGACTATCT+AGG | + | chr6.3:78682645-78682664 | MS.gene82573:CDS | 35.0% | |
| ACATTAAGGAAAATCTCACC+TGG | - | chr6.3:78684856-78684875 | None:intergenic | 35.0% | |
| AGCACAACATGAAAACGATA+GGG | - | chr6.3:78685371-78685390 | None:intergenic | 35.0% | |
| AGCTTGGGGTTAAAATAGTT+GGG | - | chr6.3:78680833-78680852 | None:intergenic | 35.0% | |
| ATAAAAGTGGATGACCAAGA+AGG | + | chr6.3:78683779-78683798 | MS.gene82573:CDS | 35.0% | |
| ATAACCTTGATGAAAGCTTG+GGG | - | chr6.3:78680847-78680866 | None:intergenic | 35.0% | |
| ATACTAGCTGTGGCATTATT+TGG | + | chr6.3:78684528-78684547 | MS.gene82573:intron | 35.0% | |
| ATAGTCACACTTCACATTGT+TGG | - | chr6.3:78682643-78682662 | None:intergenic | 35.0% | |
| ATATCAACGCAAACTACTTG+TGG | + | chr6.3:78680628-78680647 | MS.gene82573:CDS | 35.0% | |
| ATCGAAGATGGAAATCTTGA+AGG | + | chr6.3:78685462-78685481 | MS.gene82573:CDS | 35.0% | |
| ATGTAGGTAGTAACGCATTA+TGG | - | chr6.3:78684643-78684662 | None:intergenic | 35.0% | |
| CACAAGTGATCCATATGTTA+GGG | + | chr6.3:78684332-78684351 | MS.gene82573:CDS | 35.0% | |
| CATTCACCTATACTTGATGT+AGG | - | chr6.3:78684659-78684678 | None:intergenic | 35.0% | |
| CTACCTCTACAAATGTATGT+AGG | - | chr6.3:78682494-78682513 | None:intergenic | 35.0% | |
| GAAGCAAAATGCTCATTTCA+TGG | - | chr6.3:78681613-78681632 | None:intergenic | 35.0% | |
| GATAACCTTGATGAAAGCTT+GGG | - | chr6.3:78680848-78680867 | None:intergenic | 35.0% | |
| GATTTAAGAAAAAAGGCGGT+TGG | + | chr6.3:78682345-78682364 | MS.gene82573:CDS | 35.0% | |
| GCCAAGACAATGAACTTATA+AGG | - | chr6.3:78682180-78682199 | None:intergenic | 35.0% | |
| GCCTTATAAGTTCATTGTCT+TGG | + | chr6.3:78682176-78682195 | MS.gene82573:intron | 35.0% | |
| GCTATAACACTATAGCATAG+CGG | - | chr6.3:78682878-78682897 | None:intergenic | 35.0% | |
| GGAACTCCTAGAAAGTTTAT+TGG | - | chr6.3:78682400-78682419 | None:intergenic | 35.0% | |
| GGTGAAAAAAACTAAGACAG+TGG | + | chr6.3:78680325-78680344 | MS.gene82573:intron | 35.0% | |
| TAGAAATTGAGGAATTGACG+AGG | + | chr6.3:78682511-78682530 | MS.gene82573:CDS | 35.0% | |
| TAGTCACACTTCACATTGTT+GGG | - | chr6.3:78682642-78682661 | None:intergenic | 35.0% | |
| TATGGAAAGGTAAGTAACAC+TGG | + | chr6.3:78683449-78683468 | MS.gene82573:intron | 35.0% | |
| TCAACAATAATGTGGGCAAT+AGG | + | chr6.3:78683038-78683057 | MS.gene82573:CDS | 35.0% | |
| TCAACTCTTTCCTACACAAA+AGG | - | chr6.3:78681295-78681314 | None:intergenic | 35.0% | |
| TCACAAATCGCAGAAAATAG+CGG | + | chr6.3:78682768-78682787 | MS.gene82573:intron | 35.0% | |
| TCATTACAAAAACGTTTGCG+TGG | + | chr6.3:78685116-78685135 | MS.gene82573:intron | 35.0% | |
| TCCTCGCTGAAAATAAAATC+TGG | - | chr6.3:78682949-78682968 | None:intergenic | 35.0% | |
| TCCTTTGATGCTTTATGTGA+AGG | + | chr6.3:78684616-78684635 | MS.gene82573:CDS | 35.0% | |
| TGACAACACTATCTTCATTC+AGG | + | chr6.3:78682914-78682933 | MS.gene82573:intron | 35.0% | |
| TGATAACCTTGATGAAAGCT+TGG | - | chr6.3:78680849-78680868 | None:intergenic | 35.0% | |
| TGGAAGTTACTGGTATATCA+CGG | + | chr6.3:78685136-78685155 | MS.gene82573:intron | 35.0% | |
| TTACTGGTATATCACGGATT+AGG | + | chr6.3:78685142-78685161 | MS.gene82573:intron | 35.0% | |
| TTCAGAATGTCTTCTGCTTA+AGG | - | chr6.3:78685631-78685650 | None:intergenic | 35.0% | |
| TTTAGGTCTCAAATCGAAGA+TGG | + | chr6.3:78685450-78685469 | MS.gene82573:CDS | 35.0% | |
| ! | AAAACTTTTCACGGACACTT+TGG | + | chr6.3:78682272-78682291 | MS.gene82573:CDS | 35.0% |
| ! | AAAGAGTGGCAATTTTCTGA+TGG | + | chr6.3:78683257-78683276 | MS.gene82573:CDS | 35.0% |
| ! | ACACCTTCGATTTGAAATGT+TGG | + | chr6.3:78680549-78680568 | MS.gene82573:intron | 35.0% |
| ! | AGTGCTCTTCCATCTAAAAT+CGG | - | chr6.3:78681800-78681819 | None:intergenic | 35.0% |
| ! | ATAATTATATGTGTCGACGC+GGG | - | chr6.3:78679892-78679911 | None:intergenic | 35.0% |
| ! | ATTTCAAATCGAAGGTGTGT+CGG | - | chr6.3:78680547-78680566 | None:intergenic | 35.0% |
| ! | CAATTGTAGCGACATGATTT+TGG | + | chr6.3:78680261-78680280 | MS.gene82573:intron | 35.0% |
| ! | CATAATTATATGTGTCGACG+CGG | - | chr6.3:78679893-78679912 | None:intergenic | 35.0% |
| ! | CTTTTCGGAGATGAAAACAT+TGG | + | chr6.3:78683650-78683669 | MS.gene82573:CDS | 35.0% |
| ! | GGTCTTTTCTTTTTCCACTT+GGG | + | chr6.3:78679525-78679544 | MS.gene82573:CDS | 35.0% |
| ! | GTATTTACCGAGGAACTTTT+CGG | + | chr6.3:78683635-78683654 | MS.gene82573:CDS | 35.0% |
| ! | TATATGGCTACTGGTCTAAT+GGG | - | chr6.3:78685218-78685237 | None:intergenic | 35.0% |
| ! | TCCTTCACATAAAGCATCAA+AGG | - | chr6.3:78684620-78684639 | None:intergenic | 35.0% |
| ! | TCTTTTCTTTTTGCGGTTCT+AGG | + | chr6.3:78681127-78681146 | MS.gene82573:intron | 35.0% |
| ! | TGCATTTTCAGTGACCAAAT+TGG | + | chr6.3:78680163-78680182 | MS.gene82573:intron | 35.0% |
| ! | TGCTTGGGTTGTTGAAAAAT+GGG | + | chr6.3:78679504-78679523 | MS.gene82573:CDS | 35.0% |
| ! | TTATATGGCTACTGGTCTAA+TGG | - | chr6.3:78685219-78685238 | None:intergenic | 35.0% |
| ! | TTGCTTGGGTTGTTGAAAAA+TGG | + | chr6.3:78679503-78679522 | MS.gene82573:CDS | 35.0% |
| !! | CATAGGTACTGACATTAAGT+TGG | + | chr6.3:78679997-78680016 | MS.gene82573:intron | 35.0% |
| !! | TTCTTGGTCATCCACTTTTA+TGG | - | chr6.3:78683780-78683799 | None:intergenic | 35.0% |
| !!! | TCCAGATTTTATTTTCAGCG+AGG | + | chr6.3:78682945-78682964 | MS.gene82573:intron | 35.0% |
| !!! | TCCAGTTGTTTTGATTGCTT+GGG | + | chr6.3:78679489-78679508 | MS.gene82573:CDS | 35.0% |
| !!! | TTCCAGTTGTTTTGATTGCT+TGG | + | chr6.3:78679488-78679507 | MS.gene82573:CDS | 35.0% |
| AACACACCATTGATCCTTCT+TGG | - | chr6.3:78683796-78683815 | None:intergenic | 40.0% | |
| AACTCTCAGCAGTCACTTAA+CGG | + | chr6.3:78683308-78683327 | MS.gene82573:CDS | 40.0% | |
| AAGCTACTCCTAAGAGCTTA+TGG | + | chr6.3:78683975-78683994 | MS.gene82573:intron | 40.0% | |
| AAGTTCCAGAAATGCAGAAG+AGG | + | chr6.3:78684780-78684799 | MS.gene82573:CDS | 40.0% | |
| AATCGCAGAAAATAGCGGTT+TGG | + | chr6.3:78682773-78682792 | MS.gene82573:intron | 40.0% | |
| AATGCAGAAGAGGCAAAGTA+TGG | + | chr6.3:78684790-78684809 | MS.gene82573:CDS | 40.0% | |
| ACAAAACTCTAACCCCTCAA+TGG | + | chr6.3:78684561-78684580 | MS.gene82573:CDS | 40.0% | |
| ACAACAATGTGCACATTTGG+AGG | - | chr6.3:78685083-78685102 | None:intergenic | 40.0% | |
| ACCCAAGCAATCAAAACAAC+TGG | - | chr6.3:78679493-78679512 | None:intergenic | 40.0% | |
| ACCTCTTCAAGGTGTGAAAA+AGG | + | chr6.3:78684730-78684749 | MS.gene82573:CDS | 40.0% | |
| ACGATTGAATTTGACGAGGT+TGG | + | chr6.3:78683587-78683606 | MS.gene82573:CDS | 40.0% | |
| ACTTGTTCTGATTGAAGGGA+GGG | + | chr6.3:78684284-78684303 | MS.gene82573:CDS | 40.0% | |
| AGAATGTGGCATCAAGACTT+CGG | - | chr6.3:78681075-78681094 | None:intergenic | 40.0% | |
| ATATAGTACCTCTCCAGAGT+TGG | - | chr6.3:78683141-78683160 | None:intergenic | 40.0% | |
| ATATGTAGCTCAGCTAGAGA+CGG | + | chr6.3:78685536-78685555 | MS.gene82573:CDS | 40.0% | |
| ATCAAAGGACTTCCATCATC+AGG | - | chr6.3:78684605-78684624 | None:intergenic | 40.0% | |
| ATGGGATGCACCGTTTAATA+TGG | + | chr6.3:78682566-78682585 | MS.gene82573:CDS | 40.0% | |
| ATGTCAGTACCTATGATGCA+CGG | - | chr6.3:78679992-78680011 | None:intergenic | 40.0% | |
| ATTACACCAAATTCCTAGCC+AGG | + | chr6.3:78684835-78684854 | MS.gene82573:CDS | 40.0% | |
| ATTGAATTTGACGAGGTTGG+TGG | + | chr6.3:78683590-78683609 | MS.gene82573:CDS | 40.0% | |
| CAACAAAGTGGATCAACCAA+TGG | + | chr6.3:78682438-78682457 | MS.gene82573:CDS | 40.0% | |
| CACTTCTTCGATAATGACCA+GGG | + | chr6.3:78684234-78684253 | MS.gene82573:intron | 40.0% | |
| CACTTTGGTTAAAACCATGG+TGG | + | chr6.3:78682287-78682306 | MS.gene82573:CDS | 40.0% | |
| CAGCACAACATGAAAACGAT+AGG | - | chr6.3:78685372-78685391 | None:intergenic | 40.0% | |
| CCATAGTGTACCCTAACATA+TGG | - | chr6.3:78684345-78684364 | None:intergenic | 40.0% | |
| CCATATGTTAGGGTACACTA+TGG | + | chr6.3:78684342-78684361 | MS.gene82573:CDS | 40.0% | |
| CCTCTTCAAGGTGTGAAAAA+GGG | + | chr6.3:78684731-78684750 | MS.gene82573:CDS | 40.0% | |
| CGAGAATCTATGAAAACTCC+TGG | - | chr6.3:78684489-78684508 | None:intergenic | 40.0% | |
| CTCAGCAAGATAAAGGAACT+TGG | + | chr6.3:78685573-78685592 | MS.gene82573:CDS | 40.0% | |
| CTCATACTCCAAATCCTGTT+TGG | + | chr6.3:78683558-78683577 | MS.gene82573:CDS | 40.0% | |
| CTCTCCAAAACAGTCTCAAA+GGG | + | chr6.3:78684047-78684066 | MS.gene82573:intron | 40.0% | |
| CTTATGAAGCACACAGTCTT+TGG | + | chr6.3:78679854-78679873 | MS.gene82573:intron | 40.0% | |
| GAAATGGTTGTCCCATTTGA+GGG | + | chr6.3:78683113-78683132 | MS.gene82573:CDS | 40.0% | |
| GAATGTCTTCTGCTTAAGGA+AGG | - | chr6.3:78685627-78685646 | None:intergenic | 40.0% | |
| GACTTTACGAGTCAAGTGTA+TGG | + | chr6.3:78684458-78684477 | MS.gene82573:intron | 40.0% | |
| GATAAGTGGATACCTCTTCA+AGG | + | chr6.3:78684719-78684738 | MS.gene82573:CDS | 40.0% | |
| GATTCTCGAGTTCAATAACC+TGG | + | chr6.3:78684501-78684520 | MS.gene82573:intron | 40.0% | |
| GCACAAGTGATCCATATGTT+AGG | + | chr6.3:78684331-78684350 | MS.gene82573:CDS | 40.0% | |
| GCACCAACATTTCAAATCGA+AGG | - | chr6.3:78680555-78680574 | None:intergenic | 40.0% | |
| GCTGCTGCAAAAGAAAAATC+TGG | + | chr6.3:78683398-78683417 | MS.gene82573:CDS | 40.0% | |
| GCTTCTTCTCAGCAAGATAA+AGG | + | chr6.3:78685566-78685585 | MS.gene82573:CDS | 40.0% | |
| GGACACTTTGGTTAAAACCA+TGG | + | chr6.3:78682284-78682303 | MS.gene82573:CDS | 40.0% | |
| GGACCTACATACATTTGTAG+AGG | + | chr6.3:78682488-78682507 | MS.gene82573:CDS | 40.0% | |
| GTATTCGACATTGACATGTG+TGG | - | chr6.3:78680525-78680544 | None:intergenic | 40.0% | |
| GTCTGATTCCAAACAGGATT+TGG | - | chr6.3:78683569-78683588 | None:intergenic | 40.0% | |
| TAAGAAAAAAGGCGGTTGGA+GGG | + | chr6.3:78682349-78682368 | MS.gene82573:CDS | 40.0% | |
| TATATAGCCCATCACACCAT+TGG | + | chr6.3:78680766-78680785 | MS.gene82573:intron | 40.0% | |
| TCAAAGGACTTCCATCATCA+GGG | - | chr6.3:78684604-78684623 | None:intergenic | 40.0% | |
| TCAATCGTCTGATTCCAAAC+AGG | - | chr6.3:78683575-78683594 | None:intergenic | 40.0% | |
| TCACTTCTTCGATAATGACC+AGG | + | chr6.3:78684233-78684252 | MS.gene82573:intron | 40.0% | |
| TCAGACGATTGAATTTGACG+AGG | + | chr6.3:78683583-78683602 | MS.gene82573:CDS | 40.0% | |
| TGAAATGGTTGTCCCATTTG+AGG | + | chr6.3:78683112-78683131 | MS.gene82573:CDS | 40.0% | |
| TGAGCATTCTAGTGAAAGAG+TGG | + | chr6.3:78683243-78683262 | MS.gene82573:CDS | 40.0% | |
| TGGAGGACTTGGATAAGAAA+TGG | + | chr6.3:78680648-78680667 | MS.gene82573:CDS | 40.0% | |
| TGGATCAACCAATGGTTCTT+CGG | + | chr6.3:78682446-78682465 | MS.gene82573:CDS | 40.0% | |
| TGTGTCTGTGCTTCGTTATA+TGG | - | chr6.3:78680465-78680484 | None:intergenic | 40.0% | |
| TTAACCCCAAGCTTTCATCA+AGG | + | chr6.3:78680840-78680859 | MS.gene82573:CDS | 40.0% | |
| TTAAGAAAAAAGGCGGTTGG+AGG | + | chr6.3:78682348-78682367 | MS.gene82573:CDS | 40.0% | |
| TTACAGCGAGTTATGCAACT+TGG | + | chr6.3:78681572-78681591 | MS.gene82573:intron | 40.0% | |
| TTCATCTCCGAAAAGTTCCT+CGG | - | chr6.3:78683645-78683664 | None:intergenic | 40.0% | |
| TTGGTGAGAATTGCCTTTGT+TGG | + | chr6.3:78679654-78679673 | MS.gene82573:intron | 40.0% | |
| ! | AACTTGTTCTGATTGAAGGG+AGG | + | chr6.3:78684283-78684302 | MS.gene82573:CDS | 40.0% |
| ! | ACTCTAGAGGATACACAAGA+AGG | + | chr6.3:78685513-78685532 | MS.gene82573:CDS | 40.0% |
| ! | GAGTTGCAAGAGTTTTCACT+TGG | + | chr6.3:78681313-78681332 | MS.gene82573:CDS | 40.0% |
| ! | GCAAAGCAAGCACAATTTTG+TGG | + | chr6.3:78683080-78683099 | MS.gene82573:CDS | 40.0% |
| ! | GGGTCTTTTCTTTTTCCACT+TGG | + | chr6.3:78679524-78679543 | MS.gene82573:CDS | 40.0% |
| ! | TAATTATATGTGTCGACGCG+GGG | - | chr6.3:78679891-78679910 | None:intergenic | 40.0% |
| ! | TAGTATTGAAGAGGTTGCTG+TGG | + | chr6.3:78679417-78679436 | MS.gene82573:CDS | 40.0% |
| !! | AATTTGGAAGGACTGGTTGA+TGG | + | chr6.3:78683686-78683705 | MS.gene82573:CDS | 40.0% |
| !! | AGCTAATCCAAATTGGCCTT+TGG | + | chr6.3:78684096-78684115 | MS.gene82573:intron | 40.0% |
| !! | CTAAGACAGTGGTTGTTTTG+TGG | + | chr6.3:78680336-78680355 | MS.gene82573:intron | 40.0% |
| !! | TAGAGTTTCTAGCTCACTCA+AGG | - | chr6.3:78685499-78685518 | None:intergenic | 40.0% |
| !!! | TAAGCCCTTTGAGACTGTTT+TGG | - | chr6.3:78684054-78684073 | None:intergenic | 40.0% |
| AACGTCTTCCGAAGAACCAT+TGG | - | chr6.3:78682457-78682476 | None:intergenic | 45.0% | |
| AACGTTTGCGTGGAAGTTAC+TGG | + | chr6.3:78685126-78685145 | MS.gene82573:intron | 45.0% | |
| AAGCTTGCGAAGCCATTGAT+GGG | + | chr6.3:78681638-78681657 | MS.gene82573:CDS | 45.0% | |
| AAGGAAAATCTCACCTGGCT+AGG | - | chr6.3:78684851-78684870 | None:intergenic | 45.0% | |
| ACCTGGCTTAATACTAGCTG+TGG | + | chr6.3:78684518-78684537 | MS.gene82573:intron | 45.0% | |
| AGTTGAACCCAGTCTGACAT+CGG | - | chr6.3:78682541-78682560 | None:intergenic | 45.0% | |
| ATCTCACCTGGCTAGGAATT+TGG | - | chr6.3:78684844-78684863 | None:intergenic | 45.0% | |
| ATGGATCAGTCAGGGATGTA+TGG | + | chr6.3:78683705-78683724 | MS.gene82573:CDS | 45.0% | |
| ATTAAACGGTGCATCCCATC+TGG | - | chr6.3:78682565-78682584 | None:intergenic | 45.0% | |
| ATTCGTGCAGTTCCCATCAA+TGG | - | chr6.3:78681653-78681672 | None:intergenic | 45.0% | |
| CAAACCAGATGGCTGATAAG+TGG | + | chr6.3:78684705-78684724 | MS.gene82573:CDS | 45.0% | |
| CAAACTACTTGTGGAGGACT+TGG | + | chr6.3:78680637-78680656 | MS.gene82573:CDS | 45.0% | |
| CACTTATCAGCCATCTGGTT+TGG | - | chr6.3:78684707-78684726 | None:intergenic | 45.0% | |
| CTGTTCTTAAGTGCACCCTT+TGG | + | chr6.3:78680377-78680396 | MS.gene82573:intron | 45.0% | |
| CTTCTGCTTAAGGAAGGAGA+AGG | - | chr6.3:78685621-78685640 | None:intergenic | 45.0% | |
| CTTGTGACCAAAGGCCAATT+TGG | - | chr6.3:78684106-78684125 | None:intergenic | 45.0% | |
| CTTTGCCTCTTCTGCATTTC+TGG | - | chr6.3:78684788-78684807 | None:intergenic | 45.0% | |
| GAGGCTAAAAAGACCTAGCT+AGG | - | chr6.3:78685064-78685083 | None:intergenic | 45.0% | |
| GAGTGAGCTAGAAACTCTAG+AGG | + | chr6.3:78685500-78685519 | MS.gene82573:CDS | 45.0% | |
| GCATCAAGACTTCGGATTCA+TGG | - | chr6.3:78681067-78681086 | None:intergenic | 45.0% | |
| GCTCTCCAAAACAGTCTCAA+AGG | + | chr6.3:78684046-78684065 | MS.gene82573:intron | 45.0% | |
| GGATGACCAAGAAGGATCAA+TGG | + | chr6.3:78683787-78683806 | MS.gene82573:CDS | 45.0% | |
| GGGATGAGATGGTCAACTAT+CGG | + | chr6.3:78681364-78681383 | MS.gene82573:CDS | 45.0% | |
| GTATCCACTTATCAGCCATC+TGG | - | chr6.3:78684712-78684731 | None:intergenic | 45.0% | |
| GTCAAGTGTATGGAGATTCC+AGG | + | chr6.3:78684468-78684487 | MS.gene82573:intron | 45.0% | |
| GTGACTGCTGAGAGTTGTTT+CGG | - | chr6.3:78683304-78683323 | None:intergenic | 45.0% | |
| TAAGCTTGCGAAGCCATTGA+TGG | + | chr6.3:78681637-78681656 | MS.gene82573:CDS | 45.0% | |
| TAGCTGTGGCATTATTTGGC+AGG | + | chr6.3:78684532-78684551 | MS.gene82573:intron | 45.0% | |
| TCAACGCAAACTACTTGTGG+AGG | + | chr6.3:78680631-78680650 | MS.gene82573:CDS | 45.0% | |
| TCCATCATCAGGGAACTCTA+GGG | - | chr6.3:78684594-78684613 | None:intergenic | 45.0% | |
| TGACCATCTCATCCCTTGTA+AGG | - | chr6.3:78681359-78681378 | None:intergenic | 45.0% | |
| TTAAACGGTGCATCCCATCT+GGG | - | chr6.3:78682564-78682583 | None:intergenic | 45.0% | |
| TTCCATCATCAGGGAACTCT+AGG | - | chr6.3:78684595-78684614 | None:intergenic | 45.0% | |
| TTCGATAATGACCAGGGTTC+AGG | + | chr6.3:78684240-78684259 | MS.gene82573:intron | 45.0% | |
| TTCGTTTGTATCAGCTCCTG+AGG | + | chr6.3:78681826-78681845 | MS.gene82573:CDS | 45.0% | |
| TTGATGTCTTTGTGCAGCTG+AGG | + | chr6.3:78683000-78683019 | MS.gene82573:intron | 45.0% | |
| TTGCCTCCTAGATGCTTTGA+AGG | - | chr6.3:78682421-78682440 | None:intergenic | 45.0% | |
| ! | CAAAGGGTGCACTTAAGAAC+AGG | - | chr6.3:78680379-78680398 | None:intergenic | 45.0% |
| ! | GGAGTTCCTTCAAAGCATCT+AGG | + | chr6.3:78682412-78682431 | MS.gene82573:CDS | 45.0% |
| ! | GTTCCTTCAAAGCATCTAGG+AGG | + | chr6.3:78682415-78682434 | MS.gene82573:CDS | 45.0% |
| ! | TGCTGTTTGGGCTACTATAC+AGG | + | chr6.3:78679561-78679580 | MS.gene82573:CDS | 45.0% |
| ! | TGCTTGCTTTGCTATAACCC+CGG | - | chr6.3:78683072-78683091 | None:intergenic | 45.0% |
| ! | TTTGCTATAACCCCGGAATC+TGG | - | chr6.3:78683065-78683084 | None:intergenic | 45.0% |
| !! | ACTGGTTGATGGATCAGTCA+GGG | + | chr6.3:78683697-78683716 | MS.gene82573:CDS | 45.0% |
| !! | ATCACTTGTGCCTCTGAGAT+CGG | - | chr6.3:78684322-78684341 | None:intergenic | 45.0% |
| !! | CCCTTTTTCACACCTTGAAG+AGG | - | chr6.3:78684734-78684753 | None:intergenic | 45.0% |
| !! | CTAGAGCACTCCTTTTGTGT+AGG | + | chr6.3:78681282-78681301 | MS.gene82573:intron | 45.0% |
| !! | GTATTGGTGCGCACATTTTG+AGG | + | chr6.3:78685274-78685293 | MS.gene82573:intron | 45.0% |
| !! | TCCTCTTGCACTTGCTGTTT+GGG | + | chr6.3:78679549-78679568 | MS.gene82573:CDS | 45.0% |
| !! | TTATCAGCCATCTGGTTTGG+AGG | - | chr6.3:78684704-78684723 | None:intergenic | 45.0% |
| !! | TTCCTCTTGCACTTGCTGTT+TGG | + | chr6.3:78679548-78679567 | MS.gene82573:CDS | 45.0% |
| AAGGTTGCCTCCAAACCAGA+TGG | + | chr6.3:78684694-78684713 | MS.gene82573:CDS | 50.0% | |
| AAGTGCAAGAGGAACCCAAG+TGG | - | chr6.3:78679542-78679561 | None:intergenic | 50.0% | |
| ACAGTGCTCCAATGGTGTGA+TGG | - | chr6.3:78680777-78680796 | None:intergenic | 50.0% | |
| ACCAGCCAAGAAGAAACACC+GGG | - | chr6.3:78681911-78681930 | None:intergenic | 50.0% | |
| ACCCTAGAGTTCCCTGATGA+TGG | + | chr6.3:78684590-78684609 | MS.gene82573:CDS | 50.0% | |
| ACTGGGTTCAACTCCCAGAT+GGG | + | chr6.3:78682548-78682567 | MS.gene82573:CDS | 50.0% | |
| AGAGTGAAACATCGTCGTCG+CGG | - | chr6.3:78682315-78682334 | None:intergenic | 50.0% | |
| AGCCATTCACAGTGCTCCAA+TGG | - | chr6.3:78680785-78680804 | None:intergenic | 50.0% | |
| AGGAGAACCGATGTCAGACT+GGG | + | chr6.3:78682531-78682550 | MS.gene82573:CDS | 50.0% | |
| ATCCCTTGTAAGGCCAAGCT+AGG | - | chr6.3:78681349-78681368 | None:intergenic | 50.0% | |
| ATGGTCAACTATCGGCGATC+AGG | + | chr6.3:78681372-78681391 | MS.gene82573:CDS | 50.0% | |
| CACCAGCCAAGAAGAAACAC+CGG | - | chr6.3:78681912-78681931 | None:intergenic | 50.0% | |
| CAGAGTTGGCACCCTCAAAT+GGG | - | chr6.3:78683127-78683146 | None:intergenic | 50.0% | |
| CAGTGCTCCAATGGTGTGAT+GGG | - | chr6.3:78680776-78680795 | None:intergenic | 50.0% | |
| CTTGTAAGGCCAAGCTAGGA+GGG | - | chr6.3:78681345-78681364 | None:intergenic | 50.0% | |
| GCATCTAGGAGGCAACAAAG+TGG | + | chr6.3:78682426-78682445 | MS.gene82573:CDS | 50.0% | |
| GCCACAGCTAGTATTAAGCC+AGG | - | chr6.3:78684522-78684541 | None:intergenic | 50.0% | |
| GCTATATCACTGCTGCGTAG+CGG | - | chr6.3:78682806-78682825 | None:intergenic | 50.0% | |
| GGAAGACGTTTCTGACGACA+AGG | + | chr6.3:78682467-78682486 | MS.gene82573:CDS | 50.0% | |
| GTACCTATGATGCACGGACA+CGG | - | chr6.3:78679986-78680005 | None:intergenic | 50.0% | |
| GTGAGAGTTGGAGTTGCCTT+TGG | + | chr6.3:78681848-78681867 | MS.gene82573:CDS | 50.0% | |
| GTTCAGGCTCAGGAAATGGT+TGG | + | chr6.3:78684256-78684275 | MS.gene82573:CDS | 50.0% | |
| TGGGCAATAGGACCAGATTC+CGG | + | chr6.3:78683050-78683069 | MS.gene82573:CDS | 50.0% | |
| ! | CGGATTAGGCATTGCTGATG+TGG | + | chr6.3:78685156-78685175 | MS.gene82573:intron | 50.0% |
| ! | CTAGGGTCTGGTTCCATTGA+GGG | - | chr6.3:78684577-78684596 | None:intergenic | 50.0% |
| ! | GTTGGAGTTGCCTTTGGAAG+CGG | + | chr6.3:78681854-78681873 | MS.gene82573:CDS | 50.0% |
| ! | TAGGGTCTGGTTCCATTGAG+GGG | - | chr6.3:78684576-78684595 | None:intergenic | 50.0% |
| ! | TCTAGGCACGTTTGAAGCTC+CGG | + | chr6.3:78681144-78681163 | MS.gene82573:intron | 50.0% |
| ! | TCTAGGGTCTGGTTCCATTG+AGG | - | chr6.3:78684578-78684597 | None:intergenic | 50.0% |
| ! | TGGCCTTACAAGGGATGAGA+TGG | + | chr6.3:78681353-78681372 | MS.gene82573:CDS | 50.0% |
| !! | CACCATTGGAGCACTGTGAA+TGG | + | chr6.3:78680780-78680799 | MS.gene82573:CDS | 50.0% |
| !! | CTCCTAGCTTGGCCTTACAA+GGG | + | chr6.3:78681344-78681363 | MS.gene82573:CDS | 50.0% |
| !! | GAATTTGACGAGGTTGGTGG+CGG | + | chr6.3:78683593-78683612 | MS.gene82573:CDS | 50.0% |
| !! | GACTGGTTGATGGATCAGTC+AGG | + | chr6.3:78683696-78683715 | MS.gene82573:CDS | 50.0% |
| AATGACCAGGGTTCAGGCTC+AGG | + | chr6.3:78684246-78684265 | MS.gene82573:intron | 55.0% | |
| AGAAGAAACACCGGGCCACT+CGG | - | chr6.3:78681903-78681922 | None:intergenic | 55.0% | |
| AGTCACTTCCAGCTACCGAG+TGG | + | chr6.3:78681885-78681904 | MS.gene82573:CDS | 55.0% | |
| AGTGGCCCGGTGTTTCTTCT+TGG | + | chr6.3:78681903-78681922 | MS.gene82573:CDS | 55.0% | |
| ATGATGCACGGACACGGACA+CGG | - | chr6.3:78679980-78679999 | None:intergenic | 55.0% | |
| CAGGGTTCAGGCTCAGGAAA+TGG | + | chr6.3:78684252-78684271 | MS.gene82573:intron | 55.0% | |
| CATTTCCTGAGCCTGAACCC+TGG | - | chr6.3:78684254-78684273 | None:intergenic | 55.0% | |
| CCAGAGTTGGCACCCTCAAA+TGG | - | chr6.3:78683128-78683147 | None:intergenic | 55.0% | |
| CCTTGTAAGGCCAAGCTAGG+AGG | - | chr6.3:78681346-78681365 | None:intergenic | 55.0% | |
| GACTGGGTTCAACTCCCAGA+TGG | + | chr6.3:78682547-78682566 | MS.gene82573:CDS | 55.0% | |
| GAGGAGAACCGATGTCAGAC+TGG | + | chr6.3:78682530-78682549 | MS.gene82573:CDS | 55.0% | |
| GCAACTCCAACTCTCACCTC+AGG | - | chr6.3:78681845-78681864 | None:intergenic | 55.0% | |
| GCCCAAACAGCAAGTGCAAG+AGG | - | chr6.3:78679553-78679572 | None:intergenic | 55.0% | |
| GGCAATAGGACCAGATTCCG+GGG | + | chr6.3:78683052-78683071 | MS.gene82573:CDS | 55.0% | |
| GGGCAATAGGACCAGATTCC+GGG | + | chr6.3:78683051-78683070 | MS.gene82573:CDS | 55.0% | |
| TCAGCTCCTGAGGTGAGAGT+TGG | + | chr6.3:78681836-78681855 | MS.gene82573:CDS | 55.0% | |
| TGGATCATGCCCTCCTAGCT+TGG | + | chr6.3:78681333-78681352 | MS.gene82573:CDS | 55.0% | |
| TGTCCGTGTCCGTGCATCAT+AGG | + | chr6.3:78679980-78679999 | MS.gene82573:intron | 55.0% | |
| ! | CCTCTCGAAAGAGTGCGTTC+CGG | + | chr6.3:78683731-78683750 | MS.gene82573:CDS | 55.0% |
| ! | CTCTCGAAAGAGTGCGTTCC+GGG | + | chr6.3:78683732-78683751 | MS.gene82573:CDS | 55.0% |
| ! | GAGTTGCCTTTGGAAGCGGT+GGG | + | chr6.3:78681858-78681877 | MS.gene82573:CDS | 55.0% |
| ! | TCTCGAAAGAGTGCGTTCCG+GGG | + | chr6.3:78683733-78683752 | MS.gene82573:CDS | 55.0% |
| !! | ACTTGTGCCTCTGAGATCGG+CGG | - | chr6.3:78684319-78684338 | None:intergenic | 55.0% |
| !! | CATCAGGGAACTCTAGGGTC+TGG | - | chr6.3:78684589-78684608 | None:intergenic | 55.0% |
| !! | CCATTTGAGGGTGCCAACTC+TGG | + | chr6.3:78683125-78683144 | MS.gene82573:CDS | 55.0% |
| !! | CCTCCTAGCTTGGCCTTACA+AGG | + | chr6.3:78681343-78681362 | MS.gene82573:CDS | 55.0% |
| CCGGAACGCACTCTTTCGAG+AGG | - | chr6.3:78683734-78683753 | None:intergenic | 60.0% | |
| CTGACTCCCACCGCTTCCAA+AGG | - | chr6.3:78681867-78681886 | None:intergenic | 60.0% | |
| CTTGTTGCCGCCGATCTCAG+AGG | + | chr6.3:78684309-78684328 | MS.gene82573:CDS | 60.0% | |
| GCCCGGTGTTTCTTCTTGGC+TGG | + | chr6.3:78681907-78681926 | MS.gene82573:CDS | 60.0% | |
| GTCAGTGTCCGTGTCGTGTC+CGG | + | chr6.3:78679945-78679964 | MS.gene82573:intron | 60.0% | |
| ! | GGAGTTGCCTTTGGAAGCGG+TGG | + | chr6.3:78681857-78681876 | MS.gene82573:CDS | 60.0% |
| !! | TGAGGGTGCCAACTCTGGAG+AGG | + | chr6.3:78683130-78683149 | MS.gene82573:CDS | 60.0% |
| ACGGACACGGACACGGACAC+CGG | - | chr6.3:78679967-78679986 | None:intergenic | 65.0% | |
| CACGGACACCGGACACGACA+CGG | - | chr6.3:78679956-78679975 | None:intergenic | 65.0% | |
| CACGGACACGGACACGGACA+CGG | - | chr6.3:78679968-78679987 | None:intergenic | 65.0% | |
| CTTCCAGCTACCGAGTGGCC+CGG | + | chr6.3:78681890-78681909 | MS.gene82573:CDS | 65.0% | |
| ACACCGGGCCACTCGGTAGC+TGG | - | chr6.3:78681896-78681915 | None:intergenic | 70.0% | |
| TCGTCGTCGCGGCTCCACCA+TGG | - | chr6.3:78682304-78682323 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 78679385 | 78685662 | 78679385 | ID=MS.gene82573 |
| chr6.3 | mRNA | 78679385 | 78685662 | 78679385 | ID=MS.gene82573.t1;Parent=MS.gene82573 |
| chr6.3 | exon | 78679385 | 78679582 | 78679385 | ID=MS.gene82573.t1.exon1;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78679385 | 78679582 | 78679385 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78680620 | 78680694 | 78680620 | ID=MS.gene82573.t1.exon2;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78680620 | 78680694 | 78680620 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78680773 | 78680880 | 78680773 | ID=MS.gene82573.t1.exon3;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78680773 | 78680880 | 78680773 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78681149 | 78681181 | 78681149 | ID=MS.gene82573.t1.exon4;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78681149 | 78681181 | 78681149 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78681304 | 78681393 | 78681304 | ID=MS.gene82573.t1.exon5;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78681304 | 78681393 | 78681304 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78681578 | 78681703 | 78681578 | ID=MS.gene82573.t1.exon6;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78681578 | 78681703 | 78681578 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78681785 | 78681928 | 78681785 | ID=MS.gene82573.t1.exon7;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78681785 | 78681928 | 78681785 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78682270 | 78682683 | 78682270 | ID=MS.gene82573.t1.exon8;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78682270 | 78682683 | 78682270 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78683017 | 78683151 | 78683017 | ID=MS.gene82573.t1.exon9;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78683017 | 78683151 | 78683017 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78683236 | 78683457 | 78683236 | ID=MS.gene82573.t1.exon10;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78683236 | 78683457 | 78683236 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78683536 | 78683808 | 78683536 | ID=MS.gene82573.t1.exon11;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78683536 | 78683808 | 78683536 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78684255 | 78684386 | 78684255 | ID=MS.gene82573.t1.exon12;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78684255 | 78684386 | 78684255 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78684554 | 78684856 | 78684554 | ID=MS.gene82573.t1.exon13;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78684554 | 78684856 | 78684554 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| chr6.3 | exon | 78685429 | 78685662 | 78685429 | ID=MS.gene82573.t1.exon14;Parent=MS.gene82573.t1 |
| chr6.3 | CDS | 78685429 | 78685662 | 78685429 | ID=cds.MS.gene82573.t1;Parent=MS.gene82573.t1 |
| Gene Sequence |
| Protein sequence |
