Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05454.t1 | XP_003620477.1 | 98.6 | 828 | 12 | 0 | 1 | 828 | 1 | 828 | 0.00E+00 | 1634 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05454.t1 | E9PV86 | 28.2 | 280 | 150 | 11 | 484 | 721 | 260 | 530 | 1.2e-16 | 90.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05454.t1 | G7KN36 | 98.6 | 828 | 12 | 0 | 1 | 828 | 1 | 828 | 0.0e+00 | 1634.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052463 | MS.gene05454 | 0.801809 | 7.56E-49 | -1.69E-46 |
MS.gene05454 | MS.gene054892 | 0.806409 | 8.34E-50 | -1.69E-46 |
MS.gene05454 | MS.gene055864 | 0.818456 | 1.94E-52 | -1.69E-46 |
MS.gene05454 | MS.gene05686 | 0.817676 | 2.91E-52 | -1.69E-46 |
MS.gene05454 | MS.gene058289 | 0.81183 | 5.75E-51 | -1.69E-46 |
MS.gene05454 | MS.gene061814 | 0.800403 | 1.47E-48 | -1.69E-46 |
MS.gene05454 | MS.gene063691 | 0.803597 | 3.23E-49 | -1.69E-46 |
MS.gene05454 | MS.gene066683 | 0.805212 | 1.49E-49 | -1.69E-46 |
MS.gene05454 | MS.gene072267 | 0.817838 | 2.68E-52 | -1.69E-46 |
MS.gene05454 | MS.gene08325 | 0.821082 | 4.88E-53 | -1.69E-46 |
MS.gene05454 | MS.gene08336 | 0.800175 | 1.63E-48 | -1.69E-46 |
MS.gene05454 | MS.gene09151 | 0.818191 | 2.23E-52 | -1.69E-46 |
MS.gene05454 | MS.gene09656 | 0.826511 | 2.61E-54 | -1.69E-46 |
MS.gene05454 | MS.gene20554 | 0.817388 | 3.38E-52 | -1.69E-46 |
MS.gene05454 | MS.gene20608 | 0.803759 | 2.99E-49 | -1.69E-46 |
MS.gene05454 | MS.gene21470 | 0.822167 | 2.74E-53 | -1.69E-46 |
MS.gene05454 | MS.gene21826 | 0.823798 | 1.14E-53 | -1.69E-46 |
MS.gene05454 | MS.gene25215 | 0.804793 | 1.82E-49 | -1.69E-46 |
MS.gene05454 | MS.gene25217 | 0.800522 | 1.39E-48 | -1.69E-46 |
MS.gene05454 | MS.gene25469 | 0.82938 | 5.32E-55 | -1.69E-46 |
MS.gene05454 | MS.gene25471 | 0.834648 | 2.65E-56 | -1.69E-46 |
MS.gene05454 | MS.gene29036 | 0.842093 | 3.19E-58 | -1.69E-46 |
MS.gene05454 | MS.gene29096 | 0.842332 | 2.76E-58 | -1.69E-46 |
MS.gene05454 | MS.gene30423 | 0.801122 | 1.05E-48 | -1.69E-46 |
MS.gene05454 | MS.gene31068 | 0.814657 | 1.38E-51 | -1.69E-46 |
MS.gene05454 | MS.gene33241 | 0.808337 | 3.25E-50 | -1.69E-46 |
MS.gene05454 | MS.gene34691 | 0.820876 | 5.44E-53 | -1.69E-46 |
MS.gene05454 | MS.gene34937 | 0.803906 | 2.79E-49 | -1.69E-46 |
MS.gene05454 | MS.gene35858 | 0.805042 | 1.62E-49 | -1.69E-46 |
MS.gene05454 | MS.gene36100 | 0.80212 | 6.52E-49 | -1.69E-46 |
MS.gene05454 | MS.gene36268 | 0.819932 | 8.96E-53 | -1.69E-46 |
MS.gene05454 | MS.gene39046 | 0.817248 | 3.64E-52 | -1.69E-46 |
MS.gene05454 | MS.gene43381 | 0.808501 | 3.00E-50 | -1.69E-46 |
MS.gene05454 | MS.gene43969 | 0.821012 | 5.06E-53 | -1.69E-46 |
MS.gene05454 | MS.gene43972 | 0.817553 | 3.11E-52 | -1.69E-46 |
MS.gene05454 | MS.gene48017 | 0.807494 | 4.92E-50 | -1.69E-46 |
MS.gene05454 | MS.gene49467 | 0.823599 | 1.27E-53 | -1.69E-46 |
MS.gene05454 | MS.gene52609 | 0.80008 | 1.70E-48 | -1.69E-46 |
MS.gene05454 | MS.gene52616 | 0.802624 | 5.14E-49 | -1.69E-46 |
MS.gene05454 | MS.gene55045 | 0.80565 | 1.21E-49 | -1.69E-46 |
MS.gene05454 | MS.gene62924 | 0.807704 | 4.44E-50 | -1.69E-46 |
MS.gene05454 | MS.gene63097 | 0.809894 | 1.51E-50 | -1.69E-46 |
MS.gene05454 | MS.gene68204 | 0.800759 | 1.24E-48 | -1.69E-46 |
MS.gene05454 | MS.gene73078 | 0.810641 | 1.04E-50 | -1.69E-46 |
MS.gene05454 | MS.gene73245 | 0.805087 | 1.58E-49 | -1.69E-46 |
MS.gene05454 | MS.gene74537 | 0.81128 | 7.57E-51 | -1.69E-46 |
MS.gene05454 | MS.gene75413 | 0.805099 | 1.57E-49 | -1.69E-46 |
MS.gene05454 | MS.gene75798 | 0.81256 | 3.99E-51 | -1.69E-46 |
MS.gene05454 | MS.gene76506 | 0.84717 | 1.37E-59 | -1.69E-46 |
MS.gene05454 | MS.gene78642 | 0.825866 | 3.71E-54 | -1.69E-46 |
MS.gene05454 | MS.gene78829 | 0.803617 | 3.20E-49 | -1.69E-46 |
MS.gene05454 | MS.gene82573 | 0.875038 | 4.22E-68 | -1.69E-46 |
MS.gene05454 | MS.gene84703 | 0.806296 | 8.81E-50 | -1.69E-46 |
MS.gene05454 | MS.gene85122 | 0.818924 | 1.52E-52 | -1.69E-46 |
MS.gene05454 | MS.gene87512 | 0.806783 | 6.96E-50 | -1.69E-46 |
MS.gene05454 | MS.gene88256 | 0.852 | 6.15E-61 | -1.69E-46 |
MS.gene05454 | MS.gene89084 | 0.812477 | 4.16E-51 | -1.69E-46 |
MS.gene05454 | MS.gene90939 | 0.821263 | 4.43E-53 | -1.69E-46 |
MS.gene05454 | MS.gene91778 | 0.803484 | 3.41E-49 | -1.69E-46 |
MS.gene05454 | MS.gene91928 | 0.802226 | 6.20E-49 | -1.69E-46 |
MS.gene05454 | MS.gene94056 | 0.814182 | 1.75E-51 | -1.69E-46 |
MS.gene05454 | MS.gene96119 | 0.808814 | 2.57E-50 | -1.69E-46 |
MS.gene05454 | MS.gene97017 | 0.801937 | 7.11E-49 | -1.69E-46 |
MS.gene05454 | MS.gene99858 | 0.810648 | 1.04E-50 | -1.69E-46 |
MS.gene05454 | MS.gene99860 | 0.840555 | 8.10E-58 | -1.69E-46 |
MS.gene05454 | MS.gene99937 | 0.807364 | 5.24E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05454.t1 | MTR_6g084400 | 98.551 | 828 | 12 | 0 | 1 | 828 | 1 | 828 | 0.0 | 1684 |
MS.gene05454.t1 | MTR_8g104330 | 72.661 | 823 | 210 | 7 | 1 | 816 | 1 | 815 | 0.0 | 1211 |
MS.gene05454.t1 | MTR_8g104330 | 76.159 | 755 | 167 | 6 | 67 | 816 | 16 | 762 | 0.0 | 1165 |
MS.gene05454.t1 | MTR_8g104330 | 71.335 | 764 | 204 | 7 | 1 | 757 | 1 | 756 | 0.0 | 1110 |
MS.gene05454.t1 | MTR_4g115660 | 23.971 | 559 | 337 | 27 | 72 | 595 | 51 | 556 | 3.62e-15 | 79.7 |
MS.gene05454.t1 | MTR_2g072180 | 32.759 | 116 | 73 | 2 | 613 | 724 | 195 | 309 | 3.45e-14 | 77.0 |
MS.gene05454.t1 | MTR_2g072180 | 32.759 | 116 | 73 | 2 | 613 | 724 | 285 | 399 | 4.01e-14 | 77.0 |
MS.gene05454.t1 | MTR_2g072180 | 29.817 | 218 | 129 | 10 | 69 | 273 | 51 | 257 | 2.94e-11 | 67.8 |
MS.gene05454.t1 | MTR_1g025550 | 20.463 | 518 | 338 | 23 | 97 | 595 | 69 | 531 | 2.28e-13 | 73.9 |
MS.gene05454.t1 | MTR_3g106660 | 22.348 | 528 | 337 | 25 | 101 | 594 | 66 | 554 | 9.49e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05454.t1 | AT3G18370 | 58.116 | 807 | 331 | 4 | 15 | 821 | 14 | 813 | 0.0 | 895 |
MS.gene05454.t1 | AT1G05500 | 23.372 | 522 | 329 | 24 | 101 | 595 | 73 | 550 | 1.30e-15 | 81.3 |
MS.gene05454.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 201 | 309 | 9.22e-15 | 79.0 |
MS.gene05454.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 258 | 366 | 9.30e-15 | 79.0 |
MS.gene05454.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 244 | 352 | 9.46e-15 | 79.0 |
MS.gene05454.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 203 | 311 | 1.00e-14 | 79.0 |
MS.gene05454.t1 | AT3G14590 | 33.636 | 110 | 68 | 2 | 619 | 724 | 289 | 397 | 1.10e-14 | 79.0 |
MS.gene05454.t1 | AT1G53590 | 34.545 | 110 | 67 | 2 | 619 | 724 | 288 | 396 | 1.59e-13 | 75.1 |
Find 202 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTGCCTCTTCTGCATTTC+TGG | 0.020626 | 6.4:-58252812 | None:intergenic |
TCCTCTTGCACTTGCTGTTT+GGG | 0.181803 | 6.4:+58247574 | MS.gene05454:CDS |
CTCATACTCCAAATCCTATT+TGG | 0.188889 | 6.4:+58251585 | MS.gene05454:CDS |
ACCTCTTCAAGGTGTGAAAA+AGG | 0.226333 | 6.4:+58252757 | MS.gene05454:CDS |
ATCTCACCTGGCTAGGAATT+TGG | 0.243430 | 6.4:-58252868 | None:intergenic |
TTCCTCTTGCACTTGCTGTT+TGG | 0.250842 | 6.4:+58247573 | MS.gene05454:CDS |
TTTCAGCCAATAAACTTTCT+AGG | 0.254512 | 6.4:+58250418 | MS.gene05454:CDS |
TGGTAGTGCCCAAGTAAATT+TGG | 0.259804 | 6.4:+58251697 | MS.gene05454:CDS |
AACACACCGTTGATCCTTCT+TGG | 0.266918 | 6.4:-58251820 | None:intergenic |
AGTGGCCCGGTGTTTCTTCT+TGG | 0.278181 | 6.4:+58249930 | MS.gene05454:CDS |
TTACAAGAAATCTTGGTTTC+CGG | 0.287505 | 6.4:-58249190 | None:intergenic |
TCTAGGAAGTTGTGAAATTA+AGG | 0.289570 | 6.4:+58250689 | MS.gene05454:CDS |
ATGGGATGCACCGTTTAATA+TGG | 0.293962 | 6.4:+58250593 | MS.gene05454:CDS |
CCATATTGCAATTTAATGTA+TGG | 0.314578 | 6.4:-58251458 | None:intergenic |
GTCTGATTCCAAATAGGATT+TGG | 0.315307 | 6.4:-58251593 | None:intergenic |
GGAACTCCTAGAAAGTTTAT+TGG | 0.317094 | 6.4:-58250424 | None:intergenic |
TTGCCTCCTGGATGCTTTGA+AGG | 0.319975 | 6.4:-58250445 | None:intergenic |
CCAGTCCTTCCAAATTTACT+TGG | 0.320537 | 6.4:-58251706 | None:intergenic |
TTCAGAATGTCTTCTGCTTA+AGG | 0.324131 | 6.4:-58253652 | None:intergenic |
TCAATCGTCTGATTCCAAAT+AGG | 0.331221 | 6.4:-58251599 | None:intergenic |
TGATCCACTTTGTTGCCTCC+TGG | 0.342801 | 6.4:-58250457 | None:intergenic |
TTCGATAATGACCAGGGTTC+AGG | 0.342828 | 6.4:+58252267 | MS.gene05454:intron |
CACTTATCAGCCATCTGGTT+TGG | 0.344118 | 6.4:-58252731 | None:intergenic |
TGGGCAATAGGACCAGATTC+CGG | 0.349699 | 6.4:+58251077 | MS.gene05454:CDS |
GCACAAGCAATCAAAATAAC+TGG | 0.349949 | 6.4:-58247515 | None:intergenic |
CCATACATTAAATTGCAATA+TGG | 0.350240 | 6.4:+58251458 | MS.gene05454:CDS |
TGCTGTTTGGGCTACTATAC+AGG | 0.355018 | 6.4:+58247586 | MS.gene05454:CDS |
GGGCAATAGGACCAGATTCC+GGG | 0.357507 | 6.4:+58251078 | MS.gene05454:CDS |
CCAGAGTTGGCACCCTCAAA+TGG | 0.360206 | 6.4:-58251152 | None:intergenic |
GCACAAGTGATCCATATGTT+AGG | 0.369223 | 6.4:+58252358 | MS.gene05454:CDS |
GCTTCTTCTCAGCAAGATAA+AGG | 0.369968 | 6.4:+58253590 | MS.gene05454:CDS |
GTGACTGCTGAGAGTTGTTT+CGG | 0.370904 | 6.4:-58251328 | None:intergenic |
GCCCGGTGTTTCTTCTTGGC+TGG | 0.374401 | 6.4:+58249934 | MS.gene05454:CDS |
ATTAAACGGTGCATCCCATC+TGG | 0.374963 | 6.4:-58250589 | None:intergenic |
AACTCTCAGCAGTCACTTAA+CGG | 0.382207 | 6.4:+58251335 | MS.gene05454:CDS |
ATAGAACTTGTTCTGATTGA+AGG | 0.383494 | 6.4:+58252306 | MS.gene05454:CDS |
TAGTCACACTTCACATTGTT+GGG | 0.384351 | 6.4:-58250666 | None:intergenic |
ATCAAAGGACTTCCATCATC+AGG | 0.388943 | 6.4:-58252629 | None:intergenic |
AAGCTTGGGGTTAAAATAGT+TGG | 0.389425 | 6.4:-58248854 | None:intergenic |
CTAGGGTCTGGTTCCATTGA+GGG | 0.391061 | 6.4:-58252601 | None:intergenic |
AATGCAGAAGAGGCAAAGTA+TGG | 0.391593 | 6.4:+58252817 | MS.gene05454:CDS |
CCATTTGAGGGTGCCAACTC+TGG | 0.399069 | 6.4:+58251152 | MS.gene05454:CDS |
ATAAACTGTTGACAGAAATC+TGG | 0.405065 | 6.4:+58248830 | MS.gene05454:CDS |
AACAGATGATGATCAAGTTT+AGG | 0.410466 | 6.4:+58253457 | MS.gene05454:CDS |
GAAGCAAAATGCTCATTTCA+TGG | 0.412459 | 6.4:-58249637 | None:intergenic |
TCAACAATAATGTGGGCAAT+AGG | 0.413814 | 6.4:+58251065 | MS.gene05454:CDS |
CCTCCTAGCTTGGCCTTACA+AGG | 0.414305 | 6.4:+58249370 | MS.gene05454:CDS |
AATGACCAGGGTTCAGGCTC+AGG | 0.421962 | 6.4:+58252273 | MS.gene05454:intron |
TCAAATATTCAGTTAAGAAC+CGG | 0.423889 | 6.4:+58251362 | MS.gene05454:CDS |
GATAACCTTGATGAAAGCTT+GGG | 0.426526 | 6.4:-58248868 | None:intergenic |
CCATAGTGTACCCTAACATA+TGG | 0.427638 | 6.4:-58252369 | None:intergenic |
AATTTGGAAGGACTGGTTGA+TGG | 0.427955 | 6.4:+58251713 | MS.gene05454:CDS |
TTTGCTATAACCCCGGAATC+TGG | 0.428084 | 6.4:-58251089 | None:intergenic |
TAGAGGACTTGGATAAGAAA+TGG | 0.430980 | 6.4:+58248670 | MS.gene05454:CDS |
ATTCGTGCAGTTCCCATCAA+TGG | 0.433397 | 6.4:-58249677 | None:intergenic |
CCATATGTTAGGGTACACTA+TGG | 0.435681 | 6.4:+58252369 | MS.gene05454:CDS |
TATTAATAGTCTTCATATCA+AGG | 0.435927 | 6.4:+58249703 | MS.gene05454:CDS |
TGGATCATGCCCTCCTAGCT+TGG | 0.436797 | 6.4:+58249360 | MS.gene05454:CDS |
ATGTAGGTAGTAACGCATTA+TGG | 0.437857 | 6.4:-58252667 | None:intergenic |
CTTAAAATAACTGTTGTAGA+AGG | 0.438546 | 6.4:+58251392 | MS.gene05454:CDS |
ACACCGGGCCACTCGGTAGC+TGG | 0.439847 | 6.4:-58249920 | None:intergenic |
AGCTTGGGGTTAAAATAGTT+GGG | 0.439988 | 6.4:-58248853 | None:intergenic |
CTCAGCAAGATAAAGGAACT+TGG | 0.444109 | 6.4:+58253597 | MS.gene05454:CDS |
ATCGAAGATGGAAATCTTGA+AGG | 0.445397 | 6.4:+58253486 | MS.gene05454:CDS |
CAGGGTTCAGGCTCAGGAAA+TGG | 0.446550 | 6.4:+58252279 | MS.gene05454:intron |
ATAGTCACACTTCACATTGT+TGG | 0.448368 | 6.4:-58250667 | None:intergenic |
TGGATCAACCAATGGTTCTT+CGG | 0.448799 | 6.4:+58250473 | MS.gene05454:CDS |
GTGAGAGTTGGAGTTGCCTT+TGG | 0.449806 | 6.4:+58249875 | MS.gene05454:CDS |
TGGTGTAATTTACTCAAAGA+AGG | 0.451877 | 6.4:-58252848 | None:intergenic |
AGTGCTCTTCCATCTAAAAT+CGG | 0.452353 | 6.4:-58249824 | None:intergenic |
ATGGATCAGTCAGGGATGTA+TGG | 0.453137 | 6.4:+58251732 | MS.gene05454:CDS |
GAGGAGAACCGATGTCAGAC+TGG | 0.453869 | 6.4:+58250557 | MS.gene05454:CDS |
ATGGTCAACTATCGGCGATC+AGG | 0.455061 | 6.4:+58249399 | MS.gene05454:CDS |
TCATGCAAAACCATATTAAA+CGG | 0.459628 | 6.4:-58250603 | None:intergenic |
TTGTGGAGATGAAATTGAAA+TGG | 0.461121 | 6.4:+58251124 | MS.gene05454:CDS |
GAGAAGAATTAATGATCTCT+TGG | 0.464473 | 6.4:-58253620 | None:intergenic |
TCTAGGCACGTTTGAAGCTC+CGG | 0.465326 | 6.4:+58249171 | MS.gene05454:intron |
TAAGCTTGCGAAGCCATTGA+TGG | 0.465366 | 6.4:+58249664 | MS.gene05454:CDS |
TTCCATCATCAGGGAACTCT+AGG | 0.466047 | 6.4:-58252619 | None:intergenic |
TGATAACCTTGATGAAAGCT+TGG | 0.466050 | 6.4:-58248869 | None:intergenic |
GTATCCACTTATCAGCCATC+TGG | 0.470024 | 6.4:-58252736 | None:intergenic |
TCCTTTGATGCTTTATGTGA+AGG | 0.479609 | 6.4:+58252643 | MS.gene05454:CDS |
ACGATTGAATTTGACGAGGT+TGG | 0.481117 | 6.4:+58251614 | MS.gene05454:CDS |
TGACCATCTCATCCCTTGTA+AGG | 0.481520 | 6.4:-58249383 | None:intergenic |
ACCCTAGAGTTCCCTGATGA+TGG | 0.482730 | 6.4:+58252617 | MS.gene05454:CDS |
TTATCAGCCATCTGGTTTGG+AGG | 0.483822 | 6.4:-58252728 | None:intergenic |
ATTGAATTTGACGAGGTTGG+TGG | 0.484127 | 6.4:+58251617 | MS.gene05454:CDS |
CCAAGTAAATTTGGAAGGAC+TGG | 0.484300 | 6.4:+58251706 | MS.gene05454:CDS |
ATTTGTAGAGGTAGAAATTG+AGG | 0.485231 | 6.4:+58250527 | MS.gene05454:CDS |
CACCATTGGAGCACTGTGAA+TGG | 0.486631 | 6.4:+58248803 | MS.gene05454:CDS |
GTTGGAGTTGCCTTTGGAAG+CGG | 0.486786 | 6.4:+58249881 | MS.gene05454:CDS |
ACAAAACTCTAACCCCTCAA+TGG | 0.492964 | 6.4:+58252588 | MS.gene05454:CDS |
CATCAGGGAACTCTAGGGTC+TGG | 0.493217 | 6.4:-58252613 | None:intergenic |
GACTGGTTGATGGATCAGTC+AGG | 0.494486 | 6.4:+58251723 | MS.gene05454:CDS |
TCTAGGGTCTGGTTCCATTG+AGG | 0.494707 | 6.4:-58252602 | None:intergenic |
TGCTTGCTTTGCTATAACCC+CGG | 0.495826 | 6.4:-58251096 | None:intergenic |
CAAACTACTTGTAGAGGACT+TGG | 0.496318 | 6.4:+58248659 | MS.gene05454:CDS |
GCCCAAACAGCAAGTGCAAG+AGG | 0.503028 | 6.4:-58247575 | None:intergenic |
TTCAATTGATAGTATTGAAG+AGG | 0.504507 | 6.4:+58247433 | MS.gene05454:CDS |
TTTAGGTCTCAAATCGAAGA+TGG | 0.504600 | 6.4:+58253474 | MS.gene05454:CDS |
CATATAGCCCATCACACCAT+TGG | 0.505510 | 6.4:+58248789 | MS.gene05454:intron |
CTTCCAGCTACCGAGTGGCC+CGG | 0.508428 | 6.4:+58249917 | MS.gene05454:CDS |
ACTTGTTCTGATTGAAGGGA+GGG | 0.509206 | 6.4:+58252311 | MS.gene05454:CDS |
TAAAATAGAAGCCATAAAAG+TGG | 0.509234 | 6.4:+58251793 | MS.gene05454:CDS |
AAGGAAAATCTCACCTGGCT+AGG | 0.510015 | 6.4:-58252875 | None:intergenic |
CACAAGTGATCCATATGTTA+GGG | 0.511301 | 6.4:+58252359 | MS.gene05454:CDS |
TTACTACCTACATCAAGTAT+AGG | 0.513003 | 6.4:+58252677 | MS.gene05454:CDS |
AACGTCTTCCGAAGAACCAT+TGG | 0.515459 | 6.4:-58250481 | None:intergenic |
CAGAGTTGGCACCCTCAAAT+GGG | 0.516145 | 6.4:-58251151 | None:intergenic |
CAAACCAGATGGCTGATAAG+TGG | 0.520171 | 6.4:+58252732 | MS.gene05454:CDS |
GAATTTGACGAGGTTGGTGG+CGG | 0.522985 | 6.4:+58251620 | MS.gene05454:CDS |
ATTACACCAAATTCCTAGCC+AGG | 0.524902 | 6.4:+58252862 | MS.gene05454:CDS |
GAAATGGTTGTCCCATTTGA+GGG | 0.525655 | 6.4:+58251140 | MS.gene05454:CDS |
AATAACTGTTGTAGAAGGAA+AGG | 0.529513 | 6.4:+58251397 | MS.gene05454:CDS |
GGAGTTGCCTTTGGAAGCGG+TGG | 0.531014 | 6.4:+58249884 | MS.gene05454:CDS |
AAGTTCCAGAAATGCAGAAG+AGG | 0.531109 | 6.4:+58252807 | MS.gene05454:CDS |
GATAAGTGGATACCTCTTCA+AGG | 0.532440 | 6.4:+58252746 | MS.gene05454:CDS |
TTCATCTCCGAAAAGTTCCT+CGG | 0.534068 | 6.4:-58251669 | None:intergenic |
CCTCTACAAGTAGTTTGCGT+TGG | 0.534467 | 6.4:-58248653 | None:intergenic |
TGAAATGGTTGTCCCATTTG+AGG | 0.535808 | 6.4:+58251139 | MS.gene05454:CDS |
TAGAACTTGTTCTGATTGAA+GGG | 0.536589 | 6.4:+58252307 | MS.gene05454:CDS |
CCTCTCGAAAGAGTGCGTTC+CGG | 0.537536 | 6.4:+58251758 | MS.gene05454:CDS |
CAGTGCTCCAATGGTGTGAT+GGG | 0.541796 | 6.4:-58248796 | None:intergenic |
CACCAGCCAAGAAGAAACAC+CGG | 0.542319 | 6.4:-58249936 | None:intergenic |
ACAGTGCTCCAATGGTGTGA+TGG | 0.543090 | 6.4:-58248797 | None:intergenic |
CTTGTAAGGCCAAGCTAGGA+GGG | 0.545845 | 6.4:-58249369 | None:intergenic |
AGCCATTCACAGTGCTCCAA+TGG | 0.546401 | 6.4:-58248805 | None:intergenic |
ATCACTTGTGCCTCTGAGAT+CGG | 0.550679 | 6.4:-58252346 | None:intergenic |
TTACAGCGAGTTATGCAACT+TGG | 0.552195 | 6.4:+58249599 | MS.gene05454:intron |
TAGGGTCTGGTTCCATTGAG+GGG | 0.552252 | 6.4:-58252600 | None:intergenic |
ACCAGCCAAGAAGAAACACC+GGG | 0.560295 | 6.4:-58249935 | None:intergenic |
ATTAATAGTCTTCATATCAA+GGG | 0.560450 | 6.4:+58249704 | MS.gene05454:CDS |
CTACCTCTACAAATGTATGT+AGG | 0.562256 | 6.4:-58250518 | None:intergenic |
AAGCAAAATGCTCATTTCAT+GGG | 0.563579 | 6.4:-58249636 | None:intergenic |
CAGTCCTTCCAAATTTACTT+GGG | 0.564700 | 6.4:-58251705 | None:intergenic |
TCAGCTCCTGAGGTGAGAGT+TGG | 0.566088 | 6.4:+58249863 | MS.gene05454:CDS |
TAGAGTTTCTAGCTCACTCA+AGG | 0.566537 | 6.4:-58253520 | None:intergenic |
AAGATGACTCAACAATAATG+TGG | 0.566923 | 6.4:+58251057 | MS.gene05454:CDS |
TTAACCCCAAGCTTTCATCA+AGG | 0.567320 | 6.4:+58248863 | MS.gene05454:CDS |
GCAACTCCAACTCTCACCTC+AGG | 0.567514 | 6.4:-58249869 | None:intergenic |
ATATAGTACCTCTCCAGAGT+TGG | 0.567676 | 6.4:-58251165 | None:intergenic |
CATTAAATTGCAATATGGAA+AGG | 0.567822 | 6.4:+58251463 | MS.gene05454:CDS |
AGAAGAAACACCGGGCCACT+CGG | 0.570094 | 6.4:-58249927 | None:intergenic |
CCTTGTAAGGCCAAGCTAGG+AGG | 0.570679 | 6.4:-58249370 | None:intergenic |
GTTCAGGCTCAGGAAATGGT+TGG | 0.572394 | 6.4:+58252283 | MS.gene05454:CDS |
GAATGTCTTCTGCTTAAGGA+AGG | 0.575240 | 6.4:-58253648 | None:intergenic |
TCGTCGTCGCGGCTCCACCA+TGG | 0.575472 | 6.4:-58250328 | None:intergenic |
AAGCTTGCGAAGCCATTGAT+GGG | 0.576225 | 6.4:+58249665 | MS.gene05454:CDS |
TCCTTCACATAAAGCATCAA+AGG | 0.577767 | 6.4:-58252644 | None:intergenic |
TGGCCTTACAAGGGATGAGA+TGG | 0.577839 | 6.4:+58249380 | MS.gene05454:CDS |
GGAGTTCCTTCAAAGCATCC+AGG | 0.578334 | 6.4:+58250439 | MS.gene05454:CDS |
CATTCACCTATACTTGATGT+AGG | 0.582110 | 6.4:-58252683 | None:intergenic |
ACTGGGTTCAACTCCCAGAT+GGG | 0.583518 | 6.4:+58250575 | MS.gene05454:CDS |
CTCCTAGCTTGGCCTTACAA+GGG | 0.587231 | 6.4:+58249371 | MS.gene05454:CDS |
CTGACTCCCACCGCTTCCAA+AGG | 0.592548 | 6.4:-58249891 | None:intergenic |
TTCGTTTGTATCAGCTCCTG+AGG | 0.594024 | 6.4:+58249853 | MS.gene05454:CDS |
GACTGGGTTCAACTCCCAGA+TGG | 0.594097 | 6.4:+58250574 | MS.gene05454:CDS |
AACTTGTTCTGATTGAAGGG+AGG | 0.594772 | 6.4:+58252310 | MS.gene05454:CDS |
AATGTGAAGTGTGACTATCT+AGG | 0.596257 | 6.4:+58250672 | MS.gene05454:CDS |
GGGATGAGATGGTCAACTAT+CGG | 0.600420 | 6.4:+58249391 | MS.gene05454:CDS |
ATCCCTTGTAAGGCCAAGCT+AGG | 0.602403 | 6.4:-58249373 | None:intergenic |
GAGTTGCCTTTGGAAGCGGT+GGG | 0.609469 | 6.4:+58249885 | MS.gene05454:CDS |
AGGAGAACCGATGTCAGACT+GGG | 0.609692 | 6.4:+58250558 | MS.gene05454:CDS |
TAGTATTGAAGAGGTTGCTG+TGG | 0.612031 | 6.4:+58247442 | MS.gene05454:CDS |
AGATGACTCAACAATAATGT+GGG | 0.612110 | 6.4:+58251058 | MS.gene05454:CDS |
ACTCTAGAGGATACACAAGA+AGG | 0.617271 | 6.4:+58253537 | MS.gene05454:CDS |
GGACACTTTGGTTAAAACCA+TGG | 0.620664 | 6.4:+58250311 | MS.gene05454:CDS |
CCGGAACGCACTCTTTCGAG+AGG | 0.621044 | 6.4:-58251758 | None:intergenic |
TGAGCATTGTAGTGAAAGAG+TGG | 0.621454 | 6.4:+58251270 | MS.gene05454:CDS |
TCCATCATCAGGGAACTCTA+GGG | 0.621732 | 6.4:-58252618 | None:intergenic |
CCAACGCAAACTACTTGTAG+AGG | 0.623092 | 6.4:+58248653 | MS.gene05454:CDS |
ACTTGGATAAGAAATGGAAG+CGG | 0.623992 | 6.4:+58248676 | MS.gene05454:CDS |
TTAAACGGTGCATCCCATCT+GGG | 0.624676 | 6.4:-58250588 | None:intergenic |
TAGAAATTGAGGAATTGACG+AGG | 0.625432 | 6.4:+58250538 | MS.gene05454:CDS |
TCAAAGGACTTCCATCATCA+GGG | 0.626540 | 6.4:-58252628 | None:intergenic |
AAGGTTGCCTCCAAACCAGA+TGG | 0.627979 | 6.4:+58252721 | MS.gene05454:CDS |
AATGTGTTGTAGAATATCAA+AGG | 0.628027 | 6.4:+58252702 | MS.gene05454:CDS |
CAACAAAGTGGATCAACCAA+TGG | 0.632764 | 6.4:+58250465 | MS.gene05454:CDS |
AGTTGAACCCAGTCTGACAT+CGG | 0.634963 | 6.4:-58250565 | None:intergenic |
AGTGCCCAAGTAAATTTGGA+AGG | 0.635986 | 6.4:+58251701 | MS.gene05454:CDS |
ATAAAAGTGGATGACCAAGA+AGG | 0.639601 | 6.4:+58251806 | MS.gene05454:CDS |
ACTGGTTGATGGATCAGTCA+GGG | 0.640664 | 6.4:+58251724 | MS.gene05454:CDS |
GGACCTACATACATTTGTAG+AGG | 0.649209 | 6.4:+58250515 | MS.gene05454:CDS |
CTTGTTGCCGCCGATCTCAG+AGG | 0.650591 | 6.4:+58252336 | MS.gene05454:CDS |
GCGGATCATATTGAATAACT+CGG | 0.651378 | 6.4:+58248695 | MS.gene05454:CDS |
CACTTTGGTTAAAACCATGG+TGG | 0.655161 | 6.4:+58250314 | MS.gene05454:CDS |
GGATGACCAAGAAGGATCAA+CGG | 0.659729 | 6.4:+58251814 | MS.gene05454:CDS |
ATAACCTTGATGAAAGCTTG+GGG | 0.660235 | 6.4:-58248867 | None:intergenic |
GGCAATAGGACCAGATTCCG+GGG | 0.664051 | 6.4:+58251079 | MS.gene05454:CDS |
TGAGGGTGCCAACTCTGGAG+AGG | 0.665513 | 6.4:+58251157 | MS.gene05454:CDS |
GCATCCAGGAGGCAACAAAG+TGG | 0.665712 | 6.4:+58250453 | MS.gene05454:CDS |
AAACTTCAAGAAAAGAACAA+AGG | 0.670892 | 6.4:+58252392 | MS.gene05454:CDS |
GGAAGACGTTTCTGACGACA+AGG | 0.672222 | 6.4:+58250494 | MS.gene05454:CDS |
GAGTGAGCTAGAAACTCTAG+AGG | 0.676655 | 6.4:+58253524 | MS.gene05454:CDS |
CTTCTGCTTAAGGAAGGAGA+AGG | 0.688266 | 6.4:-58253642 | None:intergenic |
AAAACTAAAAGTATTTACCG+AGG | 0.690759 | 6.4:+58251652 | MS.gene05454:CDS |
AGAGTGAAACATCGTCGTCG+CGG | 0.704416 | 6.4:-58250339 | None:intergenic |
AAGGTTATCAGCTATAGTTG+AGG | 0.707519 | 6.4:+58248882 | MS.gene05454:CDS |
TCAGACGATTGAATTTGACG+AGG | 0.710813 | 6.4:+58251610 | MS.gene05454:CDS |
AGTCACTTCCAGCTACCGAG+TGG | 0.722155 | 6.4:+58249912 | MS.gene05454:CDS |
ACTTGTGCCTCTGAGATCGG+CGG | 0.725503 | 6.4:-58252343 | None:intergenic |
GTTCCTTCAAAGCATCCAGG+AGG | 0.743872 | 6.4:+58250442 | MS.gene05454:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAATAAAAATCCAATT+TGG | - | chr6.4:58248202-58248221 | None:intergenic | 10.0% |
!! | AAGTTTAATATTATATTTGT+AGG | + | chr6.4:58249969-58249988 | MS.gene05454:intron | 10.0% |
!! | TTATCTAAATATGTTTAATT+TGG | + | chr6.4:58247660-58247679 | MS.gene05454:intron | 10.0% |
!!! | ATTGATTCTTTTATTTATTT+AGG | + | chr6.4:58251859-58251878 | MS.gene05454:intron | 10.0% |
!! | ATATATATCAAAATTCCAAA+GGG | - | chr6.4:58248414-58248433 | None:intergenic | 15.0% |
!! | TATATATATCAAAATTCCAA+AGG | - | chr6.4:58248415-58248434 | None:intergenic | 15.0% |
!!! | TAATTTATCTTTTCTTTTTG+CGG | + | chr6.4:58249147-58249166 | MS.gene05454:intron | 15.0% |
!!! | TAGCTTTTATTTGTTATTTT+TGG | + | chr6.4:58248985-58249004 | MS.gene05454:intron | 15.0% |
!!! | TGATTTTCTCAAATTATTAA+CGG | + | chr6.4:58247992-58248011 | MS.gene05454:intron | 15.0% |
!!! | TTTTACAATAATGTCAATAT+AGG | - | chr6.4:58247836-58247855 | None:intergenic | 15.0% |
!!! | TTTTGGATTTTTGTTAAATT+GGG | + | chr6.4:58247736-58247755 | MS.gene05454:intron | 15.0% |
!!! | TTTTTGGATTTTTGTTAAAT+TGG | + | chr6.4:58247735-58247754 | MS.gene05454:intron | 15.0% |
!! | AAAATAACTGGAATGAAAAA+TGG | - | chr6.4:58247506-58247525 | None:intergenic | 20.0% |
!! | AATGATTGATTAATAGAGTA+AGG | - | chr6.4:58247628-58247647 | None:intergenic | 20.0% |
!! | AGAAATAAGTGTTTAATTGA+AGG | + | chr6.4:58248323-58248342 | MS.gene05454:intron | 20.0% |
!! | ATAATTTCATTTATCGAGTT+AGG | + | chr6.4:58250144-58250163 | MS.gene05454:intron | 20.0% |
!! | ATAGTTATCAAATTGTGAAT+TGG | + | chr6.4:58249012-58249031 | MS.gene05454:intron | 20.0% |
!! | ATTAATAGTCTTCATATCAA+GGG | + | chr6.4:58249704-58249723 | MS.gene05454:CDS | 20.0% |
!! | ATTACAACAAACTAACTTAT+TGG | - | chr6.4:58253039-58253058 | None:intergenic | 20.0% |
!! | ATTTATAAAGAACATCTACA+AGG | - | chr6.4:58248264-58248283 | None:intergenic | 20.0% |
!! | GAAAAGAAAAAGAAACTTAA+AGG | - | chr6.4:58253069-58253088 | None:intergenic | 20.0% |
!! | TATTAATAGTCTTCATATCA+AGG | + | chr6.4:58249703-58249722 | MS.gene05454:CDS | 20.0% |
!! | TCCAATAAAAATCACTTATA+TGG | - | chr6.4:58253262-58253281 | None:intergenic | 20.0% |
!! | TCTATCATAGTATCTAAATT+TGG | - | chr6.4:58252429-58252448 | None:intergenic | 20.0% |
!! | TTAGAATAAAATATCTCGAA+GGG | + | chr6.4:58253342-58253361 | MS.gene05454:intron | 20.0% |
!! | TTATTTATTTAGGCTCTATT+TGG | + | chr6.4:58251869-58251888 | MS.gene05454:intron | 20.0% |
!!! | AAAACTATTGACTAATGTTA+GGG | + | chr6.4:58248092-58248111 | MS.gene05454:intron | 20.0% |
!!! | AATAAGTTGAAAACAACTTA+TGG | + | chr6.4:58252026-58252045 | MS.gene05454:intron | 20.0% |
!!! | AATATAAATAGAAGTGTCTT+TGG | - | chr6.4:58252906-58252925 | None:intergenic | 20.0% |
!!! | ACGAATCTTATTAACATTTT+GGG | - | chr6.4:58247872-58247891 | None:intergenic | 20.0% |
!!! | AGTTATTTTAAGTTTCTTTC+CGG | - | chr6.4:58251384-58251403 | None:intergenic | 20.0% |
!!! | ATTTGATAACATATTTAGAC+AGG | + | chr6.4:58248120-58248139 | MS.gene05454:intron | 20.0% |
!!! | CATGAAATTTATTTTCTTTG+AGG | + | chr6.4:58247766-58247785 | MS.gene05454:intron | 20.0% |
!!! | TAAAACTATTGACTAATGTT+AGG | + | chr6.4:58248091-58248110 | MS.gene05454:intron | 20.0% |
!!! | TAAAATGCATTCATTGTTTT+TGG | + | chr6.4:58247719-58247738 | MS.gene05454:intron | 20.0% |
!!! | TGTTGTTTAATTTTCAGTAT+GGG | + | chr6.4:58248625-58248644 | MS.gene05454:intron | 20.0% |
!!! | TTGGTAATAATTTAAGAACA+TGG | + | chr6.4:58248506-58248525 | MS.gene05454:intron | 20.0% |
!!! | TTTGATAACATATTTAGACA+GGG | + | chr6.4:58248121-58248140 | MS.gene05454:intron | 20.0% |
!!! | TTTGGATTTTTGTTAAATTG+GGG | + | chr6.4:58247737-58247756 | MS.gene05454:intron | 20.0% |
! | AAACTTCAAGAAAAGAACAA+AGG | + | chr6.4:58252392-58252411 | MS.gene05454:CDS | 25.0% |
! | AACTACAACAAGTAAAAACA+AGG | - | chr6.4:58248928-58248947 | None:intergenic | 25.0% |
! | AATGTGTTGTAGAATATCAA+AGG | + | chr6.4:58252702-58252721 | MS.gene05454:CDS | 25.0% |
! | AGTAAAAACAAGGAGAATAA+CGG | - | chr6.4:58248918-58248937 | None:intergenic | 25.0% |
! | CAACTTCATATAAAGAACAT+TGG | - | chr6.4:58248753-58248772 | None:intergenic | 25.0% |
! | CATTAAATTGCAATATGGAA+AGG | + | chr6.4:58251463-58251482 | MS.gene05454:CDS | 25.0% |
! | CCATACATTAAATTGCAATA+TGG | + | chr6.4:58251458-58251477 | MS.gene05454:CDS | 25.0% |
! | CCATATTGCAATTTAATGTA+TGG | - | chr6.4:58251461-58251480 | None:intergenic | 25.0% |
! | CTAACAAATTACATATACAG+GGG | - | chr6.4:58248225-58248244 | None:intergenic | 25.0% |
! | CTCAAAAGTAGAATATCAAA+AGG | - | chr6.4:58250720-58250739 | None:intergenic | 25.0% |
! | CTTAAAATAACTGTTGTAGA+AGG | + | chr6.4:58251392-58251411 | MS.gene05454:CDS | 25.0% |
! | CTTATCGTAGTATAAAAACA+TGG | - | chr6.4:58251001-58251020 | None:intergenic | 25.0% |
! | GCTAACAAATTACATATACA+GGG | - | chr6.4:58248226-58248245 | None:intergenic | 25.0% |
! | GTTAGAATAAAATATCTCGA+AGG | + | chr6.4:58253341-58253360 | MS.gene05454:intron | 25.0% |
! | TAAAATAGAAGCCATAAAAG+TGG | + | chr6.4:58251793-58251812 | MS.gene05454:CDS | 25.0% |
! | TAAATAAGAGTTCCAAAATC+AGG | - | chr6.4:58248295-58248314 | None:intergenic | 25.0% |
! | TCAAATAAGCTAATCCAAAT+TGG | + | chr6.4:58252116-58252135 | MS.gene05454:intron | 25.0% |
! | TCAAATATTCAGTTAAGAAC+CGG | + | chr6.4:58251362-58251381 | MS.gene05454:CDS | 25.0% |
! | TCATGCAAAACCATATTAAA+CGG | - | chr6.4:58250606-58250625 | None:intergenic | 25.0% |
! | TGCTAACAAATTACATATAC+AGG | - | chr6.4:58248227-58248246 | None:intergenic | 25.0% |
! | TTTCATAGATGATGAATGTT+TGG | + | chr6.4:58249271-58249290 | MS.gene05454:intron | 25.0% |
! | TTTCTATGACAAGAGATAAA+AGG | + | chr6.4:58251961-58251980 | MS.gene05454:intron | 25.0% |
!! | CACTTTTACTTACTCTATTA+TGG | + | chr6.4:58252202-58252221 | MS.gene05454:intron | 25.0% |
!! | CTGTTCTTCATAATATTTTC+AGG | + | chr6.4:58251541-58251560 | MS.gene05454:intron | 25.0% |
!! | GAATTTGTAAAAAAGTACAG+TGG | + | chr6.4:58253280-58253299 | MS.gene05454:intron | 25.0% |
!! | GACGAATCTTATTAACATTT+TGG | - | chr6.4:58247873-58247892 | None:intergenic | 25.0% |
!! | GCCATATAAGTGATTTTTAT+TGG | + | chr6.4:58253258-58253277 | MS.gene05454:intron | 25.0% |
!! | GTTTTACTTACAAGAAATCT+TGG | - | chr6.4:58249200-58249219 | None:intergenic | 25.0% |
!! | TAAACACTTATTTCTCCAAT+TGG | - | chr6.4:58248318-58248337 | None:intergenic | 25.0% |
!! | TATGTAGGAAAAACTTTTCA+CGG | + | chr6.4:58250290-58250309 | MS.gene05454:intron | 25.0% |
!! | TCTATACTTTCTAGTGATAT+TGG | + | chr6.4:58249511-58249530 | MS.gene05454:intron | 25.0% |
!! | TTCAATTGATAGTATTGAAG+AGG | + | chr6.4:58247433-58247452 | MS.gene05454:CDS | 25.0% |
!! | TTGATAACATATTTAGACAG+GGG | + | chr6.4:58248122-58248141 | MS.gene05454:intron | 25.0% |
!! | TTTTTATTCAGCAAACAACA+CGG | + | chr6.4:58248951-58248970 | MS.gene05454:intron | 25.0% |
!!! | AAAACTAAAAGTATTTACCG+AGG | + | chr6.4:58251652-58251671 | MS.gene05454:CDS | 25.0% |
!!! | ACATTTTGACTATGTTAATC+TGG | + | chr6.4:58248159-58248178 | MS.gene05454:intron | 25.0% |
!!! | ACGTGATCTTCATTATTTTT+AGG | + | chr6.4:58252995-58253014 | MS.gene05454:intron | 25.0% |
!!! | CTGTTGTTTAATTTTCAGTA+TGG | + | chr6.4:58248624-58248643 | MS.gene05454:intron | 25.0% |
!!! | TATTTTAAGTCTGATTTCTC+CGG | - | chr6.4:58251780-58251799 | None:intergenic | 25.0% |
!!! | TGAATTGGAAGACTTATTTT+TGG | + | chr6.4:58249027-58249046 | MS.gene05454:intron | 25.0% |
!!! | TGCTGTTGATTTAAGAAAAA+AGG | + | chr6.4:58250365-58250384 | MS.gene05454:CDS | 25.0% |
!!! | TGTTGATTTAAGAAAAAAGG+CGG | + | chr6.4:58250368-58250387 | MS.gene05454:CDS | 25.0% |
!!! | TTTTTTCTTAAATCAACAGC+AGG | - | chr6.4:58250366-58250385 | None:intergenic | 25.0% |
AAAATCACTTATATGGCTAC+TGG | - | chr6.4:58253255-58253274 | None:intergenic | 30.0% | |
AACAGATGATGATCAAGTTT+AGG | + | chr6.4:58253457-58253476 | MS.gene05454:CDS | 30.0% | |
AACTGTAATATGAAGAGAAG+AGG | - | chr6.4:58251245-58251264 | None:intergenic | 30.0% | |
AAGAACATTGGCAATTTCAT+AGG | - | chr6.4:58248741-58248760 | None:intergenic | 30.0% | |
AAGATGACTCAACAATAATG+TGG | + | chr6.4:58251057-58251076 | MS.gene05454:CDS | 30.0% | |
AAGCAAAATGCTCATTTCAT+GGG | - | chr6.4:58249639-58249658 | None:intergenic | 30.0% | |
AATAACTGTTGTAGAAGGAA+AGG | + | chr6.4:58251397-58251416 | MS.gene05454:CDS | 30.0% | |
ACTTATTTCCATAAGCTCTT+AGG | - | chr6.4:58252013-58252032 | None:intergenic | 30.0% | |
AGAGTATGTTGAATAGAATG+TGG | - | chr6.4:58249116-58249135 | None:intergenic | 30.0% | |
AGATGACTCAACAATAATGT+GGG | + | chr6.4:58251058-58251077 | MS.gene05454:CDS | 30.0% | |
ATAAACTGTTGACAGAAATC+TGG | + | chr6.4:58248830-58248849 | MS.gene05454:CDS | 30.0% | |
ATACTAGATGTGGCATTATT+TGG | + | chr6.4:58252555-58252574 | MS.gene05454:intron | 30.0% | |
ATTTGTAGAGGTAGAAATTG+AGG | + | chr6.4:58250527-58250546 | MS.gene05454:CDS | 30.0% | |
CCTTTGAGTGAAGAAAAAAT+TGG | + | chr6.4:58251192-58251211 | MS.gene05454:intron | 30.0% | |
GAGAAGAATTAATGATCTCT+TGG | - | chr6.4:58253623-58253642 | None:intergenic | 30.0% | |
GAGTGAAGAAAAAATTGGTA+TGG | + | chr6.4:58251197-58251216 | MS.gene05454:intron | 30.0% | |
GGAATGAAAAATGGAATCTT+TGG | - | chr6.4:58247497-58247516 | None:intergenic | 30.0% | |
GGCAATTTCATAGGAAAAAT+AGG | - | chr6.4:58248732-58248751 | None:intergenic | 30.0% | |
GTAAAAGAATGAGGTAGTTT+AGG | - | chr6.4:58250024-58250043 | None:intergenic | 30.0% | |
TCTAGGAAGTTGTGAAATTA+AGG | + | chr6.4:58250689-58250708 | MS.gene05454:CDS | 30.0% | |
TCTCAAATTATTAACGGTGT+CGG | + | chr6.4:58247998-58248017 | MS.gene05454:intron | 30.0% | |
TCTCTTCATATTACAGTTGA+AGG | + | chr6.4:58251247-58251266 | MS.gene05454:intron | 30.0% | |
TGATAACATATTTAGACAGG+GGG | + | chr6.4:58248123-58248142 | MS.gene05454:intron | 30.0% | |
TGGTGTAATTTACTCAAAGA+AGG | - | chr6.4:58252851-58252870 | None:intergenic | 30.0% | |
TGTTAATAAGATTCGTCGAT+CGG | + | chr6.4:58247876-58247895 | MS.gene05454:intron | 30.0% | |
TTACAAGAAATCTTGGTTTC+CGG | - | chr6.4:58249193-58249212 | None:intergenic | 30.0% | |
TTACTACCTACATCAAGTAT+AGG | + | chr6.4:58252677-58252696 | MS.gene05454:CDS | 30.0% | |
TTATGTTAGAAGAACAACGA+TGG | - | chr6.4:58249755-58249774 | None:intergenic | 30.0% | |
TTCAAGAAAAGAACAAAGGT+TGG | + | chr6.4:58252396-58252415 | MS.gene05454:intron | 30.0% | |
TTGTGGAGATGAAATTGAAA+TGG | + | chr6.4:58251124-58251143 | MS.gene05454:CDS | 30.0% | |
TTTCAGCCAATAAACTTTCT+AGG | + | chr6.4:58250418-58250437 | MS.gene05454:CDS | 30.0% | |
! | AAATTGTAGTGACCTGATTT+TGG | + | chr6.4:58248280-58248299 | MS.gene05454:intron | 30.0% |
! | ACTTTCTAGTGATATTGGTA+GGG | + | chr6.4:58249516-58249535 | MS.gene05454:intron | 30.0% |
! | AGCTGATTCTAATGATTCAA+TGG | + | chr6.4:58250121-58250140 | MS.gene05454:intron | 30.0% |
! | ATAGAACTTGTTCTGATTGA+AGG | + | chr6.4:58252306-58252325 | MS.gene05454:CDS | 30.0% |
! | CTACCTCATTCTTTTACTTA+TGG | + | chr6.4:58250027-58250046 | MS.gene05454:intron | 30.0% |
! | CTTTGAGGAAATACTCAATT+TGG | + | chr6.4:58247781-58247800 | MS.gene05454:intron | 30.0% |
! | GGTCTTTTCTTTTTCTACTT+GGG | + | chr6.4:58247550-58247569 | MS.gene05454:CDS | 30.0% |
! | GTAAAAAAGTACAGTGGTAT+TGG | + | chr6.4:58253286-58253305 | MS.gene05454:intron | 30.0% |
! | TAATTTGGTGAGAATTGTCT+TGG | + | chr6.4:58247675-58247694 | MS.gene05454:intron | 30.0% |
! | TACTTTCTAGTGATATTGGT+AGG | + | chr6.4:58249515-58249534 | MS.gene05454:intron | 30.0% |
! | TAGAACTTGTTCTGATTGAA+GGG | + | chr6.4:58252307-58252326 | MS.gene05454:CDS | 30.0% |
! | TGGAACTCTTATTTACCAAT+TGG | + | chr6.4:58248300-58248319 | MS.gene05454:intron | 30.0% |
! | TGTGTTGTTATTCAGTTCAA+AGG | + | chr6.4:58252927-58252946 | MS.gene05454:intron | 30.0% |
! | TTCTTTTTCTTTTCCTAGCT+AGG | + | chr6.4:58253075-58253094 | MS.gene05454:intron | 30.0% |
! | TTTCTTCAACTATGTTTTGC+AGG | + | chr6.4:58247466-58247485 | MS.gene05454:CDS | 30.0% |
!! | AAACCTTGGTGCTATATATA+TGG | + | chr6.4:58248586-58248605 | MS.gene05454:intron | 30.0% |
!! | ATGGTTTTGCATGATAATAC+AGG | + | chr6.4:58250612-58250631 | MS.gene05454:CDS | 30.0% |
!!! | ATCTTTACACCGATTTTAGA+TGG | + | chr6.4:58249815-58249834 | MS.gene05454:CDS | 30.0% |
!!! | CCAATTTTTTCTTCACTCAA+AGG | - | chr6.4:58251195-58251214 | None:intergenic | 30.0% |
!!! | TATGCAACTTGGTTTTGATT+GGG | + | chr6.4:58249610-58249629 | MS.gene05454:CDS | 30.0% |
!!! | TTATGCAACTTGGTTTTGAT+TGG | + | chr6.4:58249609-58249628 | MS.gene05454:CDS | 30.0% |
!!! | TTCTACTTTTTCTGCTATGT+AGG | + | chr6.4:58250275-58250294 | MS.gene05454:intron | 30.0% |
!!! | TTTTTTCATCTTGTGACCAA+AGG | - | chr6.4:58252142-58252161 | None:intergenic | 30.0% |
AAACTAACTTATTGGACTGC+AGG | - | chr6.4:58253031-58253050 | None:intergenic | 35.0% | |
AACACAACAATGTGCACATT+TGG | - | chr6.4:58253113-58253132 | None:intergenic | 35.0% | |
AAGCTTGGGGTTAAAATAGT+TGG | - | chr6.4:58248857-58248876 | None:intergenic | 35.0% | |
AAGGTTATCAGCTATAGTTG+AGG | + | chr6.4:58248882-58248901 | MS.gene05454:CDS | 35.0% | |
AAGTGATTGAATGTAACCAC+AGG | + | chr6.4:58248529-58248548 | MS.gene05454:intron | 35.0% | |
AATGTCTGTGCTTGGTTATA+TGG | - | chr6.4:58248488-58248507 | None:intergenic | 35.0% | |
AATGTGAAGTGTGACTATCT+AGG | + | chr6.4:58250672-58250691 | MS.gene05454:CDS | 35.0% | |
AATTTGGTCACTGAAGTTGT+AGG | + | chr6.4:58247797-58247816 | MS.gene05454:intron | 35.0% | |
ACATTAAGGAAAATCTCACC+TGG | - | chr6.4:58252883-58252902 | None:intergenic | 35.0% | |
ACGCCATAAGTAAAAGAATG+AGG | - | chr6.4:58250033-58250052 | None:intergenic | 35.0% | |
ACTCCATATATATAGCACCA+AGG | - | chr6.4:58248592-58248611 | None:intergenic | 35.0% | |
ACTTGGATAAGAAATGGAAG+CGG | + | chr6.4:58248676-58248695 | MS.gene05454:CDS | 35.0% | |
AGCACAACATGAAAACGATA+GGG | - | chr6.4:58253395-58253414 | None:intergenic | 35.0% | |
AGCTTGGGGTTAAAATAGTT+GGG | - | chr6.4:58248856-58248875 | None:intergenic | 35.0% | |
ATAAAAGTGGATGACCAAGA+AGG | + | chr6.4:58251806-58251825 | MS.gene05454:CDS | 35.0% | |
ATAACCTTGATGAAAGCTTG+GGG | - | chr6.4:58248870-58248889 | None:intergenic | 35.0% | |
ATAGTCACACTTCACATTGT+TGG | - | chr6.4:58250670-58250689 | None:intergenic | 35.0% | |
ATATAACCAAGCACAGACAT+TGG | + | chr6.4:58248487-58248506 | MS.gene05454:intron | 35.0% | |
ATCGAAGATGGAAATCTTGA+AGG | + | chr6.4:58253486-58253505 | MS.gene05454:CDS | 35.0% | |
ATGTAGGTAGTAACGCATTA+TGG | - | chr6.4:58252670-58252689 | None:intergenic | 35.0% | |
CACAAGTGATCCATATGTTA+GGG | + | chr6.4:58252359-58252378 | MS.gene05454:CDS | 35.0% | |
CATTCACCTATACTTGATGT+AGG | - | chr6.4:58252686-58252705 | None:intergenic | 35.0% | |
CTACCTCTACAAATGTATGT+AGG | - | chr6.4:58250521-58250540 | None:intergenic | 35.0% | |
CTCATACTCCAAATCCTATT+TGG | + | chr6.4:58251585-58251604 | MS.gene05454:CDS | 35.0% | |
GAAGCAAAATGCTCATTTCA+TGG | - | chr6.4:58249640-58249659 | None:intergenic | 35.0% | |
GATAACATATTTAGACAGGG+GGG | + | chr6.4:58248124-58248143 | MS.gene05454:intron | 35.0% | |
GATAACCTTGATGAAAGCTT+GGG | - | chr6.4:58248871-58248890 | None:intergenic | 35.0% | |
GATTTAAGAAAAAAGGCGGT+TGG | + | chr6.4:58250372-58250391 | MS.gene05454:CDS | 35.0% | |
GCACAAGCAATCAAAATAAC+TGG | - | chr6.4:58247518-58247537 | None:intergenic | 35.0% | |
GCCAAGACAATGAACTTATA+AGG | - | chr6.4:58250207-58250226 | None:intergenic | 35.0% | |
GCCTTATAAGTTCATTGTCT+TGG | + | chr6.4:58250203-58250222 | MS.gene05454:intron | 35.0% | |
GCGGATCATATTGAATAACT+CGG | + | chr6.4:58248695-58248714 | MS.gene05454:CDS | 35.0% | |
GCTATAACACTATAGCATAG+CGG | - | chr6.4:58250905-58250924 | None:intergenic | 35.0% | |
GGAACTCCTAGAAAGTTTAT+TGG | - | chr6.4:58250427-58250446 | None:intergenic | 35.0% | |
GGTGAAAAAAACTAAGATCG+AGG | + | chr6.4:58248344-58248363 | MS.gene05454:intron | 35.0% | |
GTCTGATTCCAAATAGGATT+TGG | - | chr6.4:58251596-58251615 | None:intergenic | 35.0% | |
TAGAAATTGAGGAATTGACG+AGG | + | chr6.4:58250538-58250557 | MS.gene05454:CDS | 35.0% | |
TAGAGGACTTGGATAAGAAA+TGG | + | chr6.4:58248670-58248689 | MS.gene05454:CDS | 35.0% | |
TAGTCACACTTCACATTGTT+GGG | - | chr6.4:58250669-58250688 | None:intergenic | 35.0% | |
TATGGAAAGGTAAGTAACAC+TGG | + | chr6.4:58251476-58251495 | MS.gene05454:intron | 35.0% | |
TCAACAATAATGTGGGCAAT+AGG | + | chr6.4:58251065-58251084 | MS.gene05454:CDS | 35.0% | |
TCAACTCTTTCCTACACAAA+AGG | - | chr6.4:58249322-58249341 | None:intergenic | 35.0% | |
TCAATCGTCTGATTCCAAAT+AGG | - | chr6.4:58251602-58251621 | None:intergenic | 35.0% | |
TCACAAATCGCAGAAAATAG+CGG | + | chr6.4:58250795-58250814 | MS.gene05454:intron | 35.0% | |
TCATTACAAAAACGTTTGCG+TGG | + | chr6.4:58253144-58253163 | MS.gene05454:intron | 35.0% | |
TCCTCGCTGAAAATAAAATC+TGG | - | chr6.4:58250976-58250995 | None:intergenic | 35.0% | |
TCCTTTGATGCTTTATGTGA+AGG | + | chr6.4:58252643-58252662 | MS.gene05454:CDS | 35.0% | |
TGACAACACTATCTTCATTC+AGG | + | chr6.4:58250941-58250960 | MS.gene05454:intron | 35.0% | |
TGATAACCTTGATGAAAGCT+TGG | - | chr6.4:58248872-58248891 | None:intergenic | 35.0% | |
TGCAATTTCAGTGACCAAAT+TGG | + | chr6.4:58248185-58248204 | MS.gene05454:intron | 35.0% | |
TTATTACCAATGTCTGTGCT+TGG | - | chr6.4:58248496-58248515 | None:intergenic | 35.0% | |
TTCAGAATGTCTTCTGCTTA+AGG | - | chr6.4:58253655-58253674 | None:intergenic | 35.0% | |
TTTAGGTCTCAAATCGAAGA+TGG | + | chr6.4:58253474-58253493 | MS.gene05454:CDS | 35.0% | |
! | AAAACTTTTCACGGACACTT+TGG | + | chr6.4:58250299-58250318 | MS.gene05454:CDS | 35.0% |
! | AAAGAGTGGCAATTTTCTGA+TGG | + | chr6.4:58251284-58251303 | MS.gene05454:CDS | 35.0% |
! | AAAGGGTGTACATGAGAATA+GGG | - | chr6.4:58248397-58248416 | None:intergenic | 35.0% |
! | ACACCTTCAATTTGAAACCT+TGG | + | chr6.4:58248572-58248591 | MS.gene05454:intron | 35.0% |
! | AGTGCTCTTCCATCTAAAAT+CGG | - | chr6.4:58249827-58249846 | None:intergenic | 35.0% |
! | CTTTTCGGAGATGAAAACAT+TGG | + | chr6.4:58251677-58251696 | MS.gene05454:CDS | 35.0% |
! | GGGTCTTTTCTTTTTCTACT+TGG | + | chr6.4:58247549-58247568 | MS.gene05454:CDS | 35.0% |
! | GTATTTACCGAGGAACTTTT+CGG | + | chr6.4:58251662-58251681 | MS.gene05454:CDS | 35.0% |
! | GTTTCAAATTGAAGGTGTGT+CGG | - | chr6.4:58248570-58248589 | None:intergenic | 35.0% |
! | TCCTTCACATAAAGCATCAA+AGG | - | chr6.4:58252647-58252666 | None:intergenic | 35.0% |
! | TCTTTTCTTTTTGCGGTTCT+AGG | + | chr6.4:58249154-58249173 | MS.gene05454:intron | 35.0% |
! | TGCTTGTGCTGTTGAAAAAT+GGG | + | chr6.4:58247529-58247548 | MS.gene05454:CDS | 35.0% |
! | TTGCTTGTGCTGTTGAAAAA+TGG | + | chr6.4:58247528-58247547 | MS.gene05454:CDS | 35.0% |
!! | AGAAGTGTCTTTGGACATTA+AGG | - | chr6.4:58252897-58252916 | None:intergenic | 35.0% |
!! | TTCTTGGTCATCCACTTTTA+TGG | - | chr6.4:58251807-58251826 | None:intergenic | 35.0% |
!!! | TCCAGATTTTATTTTCAGCG+AGG | + | chr6.4:58250972-58250991 | MS.gene05454:intron | 35.0% |
AACTCTCAGCAGTCACTTAA+CGG | + | chr6.4:58251335-58251354 | MS.gene05454:CDS | 40.0% | |
AAGCTACTCCTAAGAGCTTA+TGG | + | chr6.4:58252002-58252021 | MS.gene05454:intron | 40.0% | |
AAGTTCCAGAAATGCAGAAG+AGG | + | chr6.4:58252807-58252826 | MS.gene05454:CDS | 40.0% | |
AATCGCAGAAAATAGCGGTT+TGG | + | chr6.4:58250800-58250819 | MS.gene05454:intron | 40.0% | |
AATGCAGAAGAGGCAAAGTA+TGG | + | chr6.4:58252817-58252836 | MS.gene05454:CDS | 40.0% | |
ACAAAACTCTAACCCCTCAA+TGG | + | chr6.4:58252588-58252607 | MS.gene05454:CDS | 40.0% | |
ACAACAATGTGCACATTTGG+AGG | - | chr6.4:58253110-58253129 | None:intergenic | 40.0% | |
ACCTCTTCAAGGTGTGAAAA+AGG | + | chr6.4:58252757-58252776 | MS.gene05454:CDS | 40.0% | |
ACCTGGCTTAATACTAGATG+TGG | + | chr6.4:58252545-58252564 | MS.gene05454:intron | 40.0% | |
ACGATTGAATTTGACGAGGT+TGG | + | chr6.4:58251614-58251633 | MS.gene05454:CDS | 40.0% | |
ACTTGTTCTGATTGAAGGGA+GGG | + | chr6.4:58252311-58252330 | MS.gene05454:CDS | 40.0% | |
AGAATGTGGCATCAAGACTT+CGG | - | chr6.4:58249102-58249121 | None:intergenic | 40.0% | |
ATATAGTACCTCTCCAGAGT+TGG | - | chr6.4:58251168-58251187 | None:intergenic | 40.0% | |
ATCAAAGGACTTCCATCATC+AGG | - | chr6.4:58252632-58252651 | None:intergenic | 40.0% | |
ATGGGATGCACCGTTTAATA+TGG | + | chr6.4:58250593-58250612 | MS.gene05454:CDS | 40.0% | |
ATTACACCAAATTCCTAGCC+AGG | + | chr6.4:58252862-58252881 | MS.gene05454:CDS | 40.0% | |
ATTGAATTTGACGAGGTTGG+TGG | + | chr6.4:58251617-58251636 | MS.gene05454:CDS | 40.0% | |
CAAACTACTTGTAGAGGACT+TGG | + | chr6.4:58248659-58248678 | MS.gene05454:CDS | 40.0% | |
CAACAAAGTGGATCAACCAA+TGG | + | chr6.4:58250465-58250484 | MS.gene05454:CDS | 40.0% | |
CACTTCTTCGATAATGACCA+GGG | + | chr6.4:58252261-58252280 | MS.gene05454:intron | 40.0% | |
CACTTTGGTTAAAACCATGG+TGG | + | chr6.4:58250314-58250333 | MS.gene05454:CDS | 40.0% | |
CAGCACAACATGAAAACGAT+AGG | - | chr6.4:58253396-58253415 | None:intergenic | 40.0% | |
CCATAGTGTACCCTAACATA+TGG | - | chr6.4:58252372-58252391 | None:intergenic | 40.0% | |
CCATATGTTAGGGTACACTA+TGG | + | chr6.4:58252369-58252388 | MS.gene05454:CDS | 40.0% | |
CCTCTTCAAGGTGTGAAAAA+GGG | + | chr6.4:58252758-58252777 | MS.gene05454:CDS | 40.0% | |
CGAGAATCTATGAAAACTCC+TGG | - | chr6.4:58252516-58252535 | None:intergenic | 40.0% | |
CTATTCTCATGTACACCCTT+TGG | + | chr6.4:58248396-58248415 | MS.gene05454:intron | 40.0% | |
CTCAGCAAGATAAAGGAACT+TGG | + | chr6.4:58253597-58253616 | MS.gene05454:CDS | 40.0% | |
CTCTCCAAAACAGTCTCAAA+GGG | + | chr6.4:58252074-58252093 | MS.gene05454:intron | 40.0% | |
GAAATGGTTGTCCCATTTGA+GGG | + | chr6.4:58251140-58251159 | MS.gene05454:CDS | 40.0% | |
GAATGTCTTCTGCTTAAGGA+AGG | - | chr6.4:58253651-58253670 | None:intergenic | 40.0% | |
GACTTTACGAGTCAAGTGTA+TGG | + | chr6.4:58252485-58252504 | MS.gene05454:intron | 40.0% | |
GATAAGTGGATACCTCTTCA+AGG | + | chr6.4:58252746-58252765 | MS.gene05454:CDS | 40.0% | |
GATTCTCGAGTTCAATAACC+TGG | + | chr6.4:58252528-58252547 | MS.gene05454:intron | 40.0% | |
GCACAAGTGATCCATATGTT+AGG | + | chr6.4:58252358-58252377 | MS.gene05454:CDS | 40.0% | |
GCACCAAGGTTTCAAATTGA+AGG | - | chr6.4:58248578-58248597 | None:intergenic | 40.0% | |
GCTGCTGCAAAAGAAAAATC+TGG | + | chr6.4:58251425-58251444 | MS.gene05454:CDS | 40.0% | |
GCTTCTTCTCAGCAAGATAA+AGG | + | chr6.4:58253590-58253609 | MS.gene05454:CDS | 40.0% | |
GGACACTTTGGTTAAAACCA+TGG | + | chr6.4:58250311-58250330 | MS.gene05454:CDS | 40.0% | |
GGACCTACATACATTTGTAG+AGG | + | chr6.4:58250515-58250534 | MS.gene05454:CDS | 40.0% | |
GTAATTGTATGTGTCCGTGT+TGG | - | chr6.4:58247961-58247980 | None:intergenic | 40.0% | |
TAAGAAAAAAGGCGGTTGGA+GGG | + | chr6.4:58250376-58250395 | MS.gene05454:CDS | 40.0% | |
TAGATGTGGCATTATTTGGC+AGG | + | chr6.4:58252559-58252578 | MS.gene05454:intron | 40.0% | |
TCAAAGGACTTCCATCATCA+GGG | - | chr6.4:58252631-58252650 | None:intergenic | 40.0% | |
TCACTTCTTCGATAATGACC+AGG | + | chr6.4:58252260-58252279 | MS.gene05454:intron | 40.0% | |
TCAGACGATTGAATTTGACG+AGG | + | chr6.4:58251610-58251629 | MS.gene05454:CDS | 40.0% | |
TGAAATGGTTGTCCCATTTG+AGG | + | chr6.4:58251139-58251158 | MS.gene05454:CDS | 40.0% | |
TGGAAGTTACTGGTATGTCA+CGG | + | chr6.4:58253164-58253183 | MS.gene05454:intron | 40.0% | |
TGGATCAACCAATGGTTCTT+CGG | + | chr6.4:58250473-58250492 | MS.gene05454:CDS | 40.0% | |
TTAACCCCAAGCTTTCATCA+AGG | + | chr6.4:58248863-58248882 | MS.gene05454:CDS | 40.0% | |
TTAAGAAAAAAGGCGGTTGG+AGG | + | chr6.4:58250375-58250394 | MS.gene05454:CDS | 40.0% | |
TTACAGCGAGTTATGCAACT+TGG | + | chr6.4:58249599-58249618 | MS.gene05454:intron | 40.0% | |
TTACTGGTATGTCACGGATT+AGG | + | chr6.4:58253170-58253189 | MS.gene05454:intron | 40.0% | |
TTCATCTCCGAAAAGTTCCT+CGG | - | chr6.4:58251672-58251691 | None:intergenic | 40.0% | |
TTGGTGAGAATTGTCTTGGT+TGG | + | chr6.4:58247679-58247698 | MS.gene05454:intron | 40.0% | |
! | AACTTGTTCTGATTGAAGGG+AGG | + | chr6.4:58252310-58252329 | MS.gene05454:CDS | 40.0% |
! | ACTCTAGAGGATACACAAGA+AGG | + | chr6.4:58253537-58253556 | MS.gene05454:CDS | 40.0% |
! | CAAAGGGTGTACATGAGAAT+AGG | - | chr6.4:58248398-58248417 | None:intergenic | 40.0% |
! | GAGTTGCAAGAGTTTTCACT+TGG | + | chr6.4:58249340-58249359 | MS.gene05454:CDS | 40.0% |
! | GCAAAGCAAGCACAATTTTG+TGG | + | chr6.4:58251107-58251126 | MS.gene05454:CDS | 40.0% |
! | TAGTATTGAAGAGGTTGCTG+TGG | + | chr6.4:58247442-58247461 | MS.gene05454:CDS | 40.0% |
! | TATATGGCTACTGGTCTGAT+GGG | - | chr6.4:58253246-58253265 | None:intergenic | 40.0% |
! | TGAGCATTGTAGTGAAAGAG+TGG | + | chr6.4:58251270-58251289 | MS.gene05454:CDS | 40.0% |
! | TTATATGGCTACTGGTCTGA+TGG | - | chr6.4:58253247-58253266 | None:intergenic | 40.0% |
!! | AATTATTAACGGTGTCGGTG+TGG | + | chr6.4:58248003-58248022 | MS.gene05454:intron | 40.0% |
!! | AATTTGGAAGGACTGGTTGA+TGG | + | chr6.4:58251713-58251732 | MS.gene05454:CDS | 40.0% |
!! | AGCTAATCCAAATTGGCCTT+TGG | + | chr6.4:58252123-58252142 | MS.gene05454:intron | 40.0% |
!! | CATAGGTACTGGCATTAAGT+TGG | + | chr6.4:58248051-58248070 | MS.gene05454:intron | 40.0% |
!! | CTAAGATCGAGGTAGTTTTG+TGG | + | chr6.4:58248355-58248374 | MS.gene05454:intron | 40.0% |
!! | TAGAGTTTCTAGCTCACTCA+AGG | - | chr6.4:58253523-58253542 | None:intergenic | 40.0% |
!!! | TAAGCCCTTTGAGACTGTTT+TGG | - | chr6.4:58252081-58252100 | None:intergenic | 40.0% |
AACACACCGTTGATCCTTCT+TGG | - | chr6.4:58251823-58251842 | None:intergenic | 45.0% | |
AACGTCTTCCGAAGAACCAT+TGG | - | chr6.4:58250484-58250503 | None:intergenic | 45.0% | |
AACGTTTGCGTGGAAGTTAC+TGG | + | chr6.4:58253154-58253173 | MS.gene05454:intron | 45.0% | |
AAGCTTGCGAAGCCATTGAT+GGG | + | chr6.4:58249665-58249684 | MS.gene05454:CDS | 45.0% | |
AAGGAAAATCTCACCTGGCT+AGG | - | chr6.4:58252878-58252897 | None:intergenic | 45.0% | |
AGTTGAACCCAGTCTGACAT+CGG | - | chr6.4:58250568-58250587 | None:intergenic | 45.0% | |
ATCTCACCTGGCTAGGAATT+TGG | - | chr6.4:58252871-58252890 | None:intergenic | 45.0% | |
ATGCCAGTACCTATGATGCA+CGG | - | chr6.4:58248046-58248065 | None:intergenic | 45.0% | |
ATGGATCAGTCAGGGATGTA+TGG | + | chr6.4:58251732-58251751 | MS.gene05454:CDS | 45.0% | |
ATTAAACGGTGCATCCCATC+TGG | - | chr6.4:58250592-58250611 | None:intergenic | 45.0% | |
ATTCGTGCAGTTCCCATCAA+TGG | - | chr6.4:58249680-58249699 | None:intergenic | 45.0% | |
CAAACCAGATGGCTGATAAG+TGG | + | chr6.4:58252732-58252751 | MS.gene05454:CDS | 45.0% | |
CACTTATCAGCCATCTGGTT+TGG | - | chr6.4:58252734-58252753 | None:intergenic | 45.0% | |
CATATAGCCCATCACACCAT+TGG | + | chr6.4:58248789-58248808 | MS.gene05454:intron | 45.0% | |
CCAACGCAAACTACTTGTAG+AGG | + | chr6.4:58248653-58248672 | MS.gene05454:CDS | 45.0% | |
CTTCTGCTTAAGGAAGGAGA+AGG | - | chr6.4:58253645-58253664 | None:intergenic | 45.0% | |
CTTGTGACCAAAGGCCAATT+TGG | - | chr6.4:58252133-58252152 | None:intergenic | 45.0% | |
CTTTGCCTCTTCTGCATTTC+TGG | - | chr6.4:58252815-58252834 | None:intergenic | 45.0% | |
GAGGCTAAAAAGACCTAGCT+AGG | - | chr6.4:58253091-58253110 | None:intergenic | 45.0% | |
GAGTGAGCTAGAAACTCTAG+AGG | + | chr6.4:58253524-58253543 | MS.gene05454:CDS | 45.0% | |
GCATCAAGACTTCGGATTCA+TGG | - | chr6.4:58249094-58249113 | None:intergenic | 45.0% | |
GCCACATCTAGTATTAAGCC+AGG | - | chr6.4:58252549-58252568 | None:intergenic | 45.0% | |
GCTCTCCAAAACAGTCTCAA+AGG | + | chr6.4:58252073-58252092 | MS.gene05454:intron | 45.0% | |
GGATGACCAAGAAGGATCAA+CGG | + | chr6.4:58251814-58251833 | MS.gene05454:CDS | 45.0% | |
GGGATGAGATGGTCAACTAT+CGG | + | chr6.4:58249391-58249410 | MS.gene05454:CDS | 45.0% | |
GTATCCACTTATCAGCCATC+TGG | - | chr6.4:58252739-58252758 | None:intergenic | 45.0% | |
GTCAAGTGTATGGAGATTCC+AGG | + | chr6.4:58252495-58252514 | MS.gene05454:intron | 45.0% | |
GTGACTGCTGAGAGTTGTTT+CGG | - | chr6.4:58251331-58251350 | None:intergenic | 45.0% | |
TAAGCTTGCGAAGCCATTGA+TGG | + | chr6.4:58249664-58249683 | MS.gene05454:CDS | 45.0% | |
TATGAAGCACGGACACTCTT+CGG | + | chr6.4:58247900-58247919 | MS.gene05454:intron | 45.0% | |
TCCATCATCAGGGAACTCTA+GGG | - | chr6.4:58252621-58252640 | None:intergenic | 45.0% | |
TGACCATCTCATCCCTTGTA+AGG | - | chr6.4:58249386-58249405 | None:intergenic | 45.0% | |
TTAAACGGTGCATCCCATCT+GGG | - | chr6.4:58250591-58250610 | None:intergenic | 45.0% | |
TTCCATCATCAGGGAACTCT+AGG | - | chr6.4:58252622-58252641 | None:intergenic | 45.0% | |
TTCGATAATGACCAGGGTTC+AGG | + | chr6.4:58252267-58252286 | MS.gene05454:intron | 45.0% | |
TTCGTTTGTATCAGCTCCTG+AGG | + | chr6.4:58249853-58249872 | MS.gene05454:CDS | 45.0% | |
TTGATGTCTTTGTGCAGCTG+AGG | + | chr6.4:58251027-58251046 | MS.gene05454:intron | 45.0% | |
! | CCTCTACAAGTAGTTTGCGT+TGG | - | chr6.4:58248656-58248675 | None:intergenic | 45.0% |
! | TGCTGTTTGGGCTACTATAC+AGG | + | chr6.4:58247586-58247605 | MS.gene05454:CDS | 45.0% |
! | TGCTTGCTTTGCTATAACCC+CGG | - | chr6.4:58251099-58251118 | None:intergenic | 45.0% |
! | TTTGCTATAACCCCGGAATC+TGG | - | chr6.4:58251092-58251111 | None:intergenic | 45.0% |
!! | ACTGGTTGATGGATCAGTCA+GGG | + | chr6.4:58251724-58251743 | MS.gene05454:CDS | 45.0% |
!! | ATCACTTGTGCCTCTGAGAT+CGG | - | chr6.4:58252349-58252368 | None:intergenic | 45.0% |
!! | CCCTTTTTCACACCTTGAAG+AGG | - | chr6.4:58252761-58252780 | None:intergenic | 45.0% |
!! | CTAGAGCACTCCTTTTGTGT+AGG | + | chr6.4:58249309-58249328 | MS.gene05454:intron | 45.0% |
!! | GTATTGGTGCGCACATTTTG+AGG | + | chr6.4:58253302-58253321 | MS.gene05454:intron | 45.0% |
!! | TCCTCTTGCACTTGCTGTTT+GGG | + | chr6.4:58247574-58247593 | MS.gene05454:CDS | 45.0% |
!! | TTATCAGCCATCTGGTTTGG+AGG | - | chr6.4:58252731-58252750 | None:intergenic | 45.0% |
!! | TTCCTCTTGCACTTGCTGTT+TGG | + | chr6.4:58247573-58247592 | MS.gene05454:CDS | 45.0% |
AAGGTTGCCTCCAAACCAGA+TGG | + | chr6.4:58252721-58252740 | MS.gene05454:CDS | 50.0% | |
ACAGTGCTCCAATGGTGTGA+TGG | - | chr6.4:58248800-58248819 | None:intergenic | 50.0% | |
ACCAGCCAAGAAGAAACACC+GGG | - | chr6.4:58249938-58249957 | None:intergenic | 50.0% | |
ACCCTAGAGTTCCCTGATGA+TGG | + | chr6.4:58252617-58252636 | MS.gene05454:CDS | 50.0% | |
ACTGGGTTCAACTCCCAGAT+GGG | + | chr6.4:58250575-58250594 | MS.gene05454:CDS | 50.0% | |
AGAGTGAAACATCGTCGTCG+CGG | - | chr6.4:58250342-58250361 | None:intergenic | 50.0% | |
AGCCATTCACAGTGCTCCAA+TGG | - | chr6.4:58248808-58248827 | None:intergenic | 50.0% | |
AGGAGAACCGATGTCAGACT+GGG | + | chr6.4:58250558-58250577 | MS.gene05454:CDS | 50.0% | |
ATCCCTTGTAAGGCCAAGCT+AGG | - | chr6.4:58249376-58249395 | None:intergenic | 50.0% | |
ATGGTCAACTATCGGCGATC+AGG | + | chr6.4:58249399-58249418 | MS.gene05454:CDS | 50.0% | |
CACCAGCCAAGAAGAAACAC+CGG | - | chr6.4:58249939-58249958 | None:intergenic | 50.0% | |
CAGAGTTGGCACCCTCAAAT+GGG | - | chr6.4:58251154-58251173 | None:intergenic | 50.0% | |
CAGTGCTCCAATGGTGTGAT+GGG | - | chr6.4:58248799-58248818 | None:intergenic | 50.0% | |
CGTCGATCGGTTATGAAGCA+CGG | + | chr6.4:58247889-58247908 | MS.gene05454:intron | 50.0% | |
CTTGTAAGGCCAAGCTAGGA+GGG | - | chr6.4:58249372-58249391 | None:intergenic | 50.0% | |
GACATGTGTCGTGTCCAACA+CGG | + | chr6.4:58247944-58247963 | MS.gene05454:intron | 50.0% | |
GCTATATCACTGCTGCGTAG+CGG | - | chr6.4:58250833-58250852 | None:intergenic | 50.0% | |
GGAAGACGTTTCTGACGACA+AGG | + | chr6.4:58250494-58250513 | MS.gene05454:CDS | 50.0% | |
GTGAGAGTTGGAGTTGCCTT+TGG | + | chr6.4:58249875-58249894 | MS.gene05454:CDS | 50.0% | |
GTTCAGGCTCAGGAAATGGT+TGG | + | chr6.4:58252283-58252302 | MS.gene05454:CDS | 50.0% | |
TATGATGCACGGACACGACA+CGG | - | chr6.4:58248035-58248054 | None:intergenic | 50.0% | |
TGATCCACTTTGTTGCCTCC+TGG | - | chr6.4:58250460-58250479 | None:intergenic | 50.0% | |
TGGGCAATAGGACCAGATTC+CGG | + | chr6.4:58251077-58251096 | MS.gene05454:CDS | 50.0% | |
TGTCCGTGCATCATAGGTAC+TGG | + | chr6.4:58248040-58248059 | MS.gene05454:intron | 50.0% | |
TTGCCTCCTGGATGCTTTGA+AGG | - | chr6.4:58250448-58250467 | None:intergenic | 50.0% | |
! | CGGATTAGGCATTGCTGATG+TGG | + | chr6.4:58253184-58253203 | MS.gene05454:intron | 50.0% |
! | CTAGGGTCTGGTTCCATTGA+GGG | - | chr6.4:58252604-58252623 | None:intergenic | 50.0% |
! | GGAGTTCCTTCAAAGCATCC+AGG | + | chr6.4:58250439-58250458 | MS.gene05454:CDS | 50.0% |
! | GTTCCTTCAAAGCATCCAGG+AGG | + | chr6.4:58250442-58250461 | MS.gene05454:CDS | 50.0% |
! | GTTGGAGTTGCCTTTGGAAG+CGG | + | chr6.4:58249881-58249900 | MS.gene05454:CDS | 50.0% |
! | TAGGGTCTGGTTCCATTGAG+GGG | - | chr6.4:58252603-58252622 | None:intergenic | 50.0% |
! | TCTAGGCACGTTTGAAGCTC+CGG | + | chr6.4:58249171-58249190 | MS.gene05454:intron | 50.0% |
! | TCTAGGGTCTGGTTCCATTG+AGG | - | chr6.4:58252605-58252624 | None:intergenic | 50.0% |
! | TGGCCTTACAAGGGATGAGA+TGG | + | chr6.4:58249380-58249399 | MS.gene05454:CDS | 50.0% |
!! | CACCATTGGAGCACTGTGAA+TGG | + | chr6.4:58248803-58248822 | MS.gene05454:CDS | 50.0% |
!! | CTCCTAGCTTGGCCTTACAA+GGG | + | chr6.4:58249371-58249390 | MS.gene05454:CDS | 50.0% |
!! | GAATTTGACGAGGTTGGTGG+CGG | + | chr6.4:58251620-58251639 | MS.gene05454:CDS | 50.0% |
!! | GACTGGTTGATGGATCAGTC+AGG | + | chr6.4:58251723-58251742 | MS.gene05454:CDS | 50.0% |
AATGACCAGGGTTCAGGCTC+AGG | + | chr6.4:58252273-58252292 | MS.gene05454:intron | 55.0% | |
ACACGACACATGTCCGACGT+CGG | - | chr6.4:58247938-58247957 | None:intergenic | 55.0% | |
AGAAGAAACACCGGGCCACT+CGG | - | chr6.4:58249930-58249949 | None:intergenic | 55.0% | |
AGTCACTTCCAGCTACCGAG+TGG | + | chr6.4:58249912-58249931 | MS.gene05454:CDS | 55.0% | |
AGTGGCCCGGTGTTTCTTCT+TGG | + | chr6.4:58249930-58249949 | MS.gene05454:CDS | 55.0% | |
CAGGGTTCAGGCTCAGGAAA+TGG | + | chr6.4:58252279-58252298 | MS.gene05454:intron | 55.0% | |
CATTTCCTGAGCCTGAACCC+TGG | - | chr6.4:58252281-58252300 | None:intergenic | 55.0% | |
CCAGAGTTGGCACCCTCAAA+TGG | - | chr6.4:58251155-58251174 | None:intergenic | 55.0% | |
CCTTGTAAGGCCAAGCTAGG+AGG | - | chr6.4:58249373-58249392 | None:intergenic | 55.0% | |
GACTGGGTTCAACTCCCAGA+TGG | + | chr6.4:58250574-58250593 | MS.gene05454:CDS | 55.0% | |
GAGGAGAACCGATGTCAGAC+TGG | + | chr6.4:58250557-58250576 | MS.gene05454:CDS | 55.0% | |
GATTAGGTGTGTCCCGACGT+CGG | + | chr6.4:58247922-58247941 | MS.gene05454:intron | 55.0% | |
GCAACTCCAACTCTCACCTC+AGG | - | chr6.4:58249872-58249891 | None:intergenic | 55.0% | |
GCACGGACACTCTTCGGATT+AGG | + | chr6.4:58247906-58247925 | MS.gene05454:intron | 55.0% | |
GCATCCAGGAGGCAACAAAG+TGG | + | chr6.4:58250453-58250472 | MS.gene05454:CDS | 55.0% | |
GCCCAAACAGCAAGTGCAAG+AGG | - | chr6.4:58247578-58247597 | None:intergenic | 55.0% | |
GGCAATAGGACCAGATTCCG+GGG | + | chr6.4:58251079-58251098 | MS.gene05454:CDS | 55.0% | |
GGGCAATAGGACCAGATTCC+GGG | + | chr6.4:58251078-58251097 | MS.gene05454:CDS | 55.0% | |
GTGTCGTGTCCGTGCATCAT+AGG | + | chr6.4:58248034-58248053 | MS.gene05454:intron | 55.0% | |
GTGTTCGACAGTGACACCTG+TGG | - | chr6.4:58248548-58248567 | None:intergenic | 55.0% | |
TCAGCTCCTGAGGTGAGAGT+TGG | + | chr6.4:58249863-58249882 | MS.gene05454:CDS | 55.0% | |
TGGATCATGCCCTCCTAGCT+TGG | + | chr6.4:58249360-58249379 | MS.gene05454:CDS | 55.0% | |
! | CCTCTCGAAAGAGTGCGTTC+CGG | + | chr6.4:58251758-58251777 | MS.gene05454:CDS | 55.0% |
! | GAGTTGCCTTTGGAAGCGGT+GGG | + | chr6.4:58249885-58249904 | MS.gene05454:CDS | 55.0% |
!! | ACTTGTGCCTCTGAGATCGG+CGG | - | chr6.4:58252346-58252365 | None:intergenic | 55.0% |
!! | ATTAACGGTGTCGGTGTGGC+AGG | + | chr6.4:58248007-58248026 | MS.gene05454:intron | 55.0% |
!! | CATCAGGGAACTCTAGGGTC+TGG | - | chr6.4:58252616-58252635 | None:intergenic | 55.0% |
!! | CCATTTGAGGGTGCCAACTC+TGG | + | chr6.4:58251152-58251171 | MS.gene05454:CDS | 55.0% |
!! | CCTCCTAGCTTGGCCTTACA+AGG | + | chr6.4:58249370-58249389 | MS.gene05454:CDS | 55.0% |
!! | TTAACGGTGTCGGTGTGGCA+GGG | + | chr6.4:58248008-58248027 | MS.gene05454:intron | 55.0% |
CACGACACATGTCCGACGTC+GGG | - | chr6.4:58247937-58247956 | None:intergenic | 60.0% | |
CCGGAACGCACTCTTTCGAG+AGG | - | chr6.4:58251761-58251780 | None:intergenic | 60.0% | |
CTGACTCCCACCGCTTCCAA+AGG | - | chr6.4:58249894-58249913 | None:intergenic | 60.0% | |
CTTGTTGCCGCCGATCTCAG+AGG | + | chr6.4:58252336-58252355 | MS.gene05454:CDS | 60.0% | |
GCCCGGTGTTTCTTCTTGGC+TGG | + | chr6.4:58249934-58249953 | MS.gene05454:CDS | 60.0% | |
! | GGAGTTGCCTTTGGAAGCGG+TGG | + | chr6.4:58249884-58249903 | MS.gene05454:CDS | 60.0% |
!! | TGAGGGTGCCAACTCTGGAG+AGG | + | chr6.4:58251157-58251176 | MS.gene05454:CDS | 60.0% |
CTTCCAGCTACCGAGTGGCC+CGG | + | chr6.4:58249917-58249936 | MS.gene05454:CDS | 65.0% | |
ACACCGGGCCACTCGGTAGC+TGG | - | chr6.4:58249923-58249942 | None:intergenic | 70.0% | |
TCGTCGTCGCGGCTCCACCA+TGG | - | chr6.4:58250331-58250350 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.4 | gene | 58247410 | 58253686 | 58247410 | ID=MS.gene05454 |
chr6.4 | mRNA | 58247410 | 58253686 | 58247410 | ID=MS.gene05454.t1;Parent=MS.gene05454 |
chr6.4 | exon | 58247410 | 58247607 | 58247410 | ID=MS.gene05454.t1.exon1;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58247410 | 58247607 | 58247410 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58248642 | 58248716 | 58248642 | ID=MS.gene05454.t1.exon2;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58248642 | 58248716 | 58248642 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58248796 | 58248903 | 58248796 | ID=MS.gene05454.t1.exon3;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58248796 | 58248903 | 58248796 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58249176 | 58249208 | 58249176 | ID=MS.gene05454.t1.exon4;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58249176 | 58249208 | 58249176 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58249331 | 58249420 | 58249331 | ID=MS.gene05454.t1.exon5;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58249331 | 58249420 | 58249331 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58249605 | 58249730 | 58249605 | ID=MS.gene05454.t1.exon6;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58249605 | 58249730 | 58249605 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58249812 | 58249955 | 58249812 | ID=MS.gene05454.t1.exon7;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58249812 | 58249955 | 58249812 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58250297 | 58250710 | 58250297 | ID=MS.gene05454.t1.exon8;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58250297 | 58250710 | 58250297 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58251044 | 58251178 | 58251044 | ID=MS.gene05454.t1.exon9;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58251044 | 58251178 | 58251044 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58251263 | 58251484 | 58251263 | ID=MS.gene05454.t1.exon10;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58251263 | 58251484 | 58251263 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58251563 | 58251835 | 58251563 | ID=MS.gene05454.t1.exon11;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58251563 | 58251835 | 58251563 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58252282 | 58252413 | 58252282 | ID=MS.gene05454.t1.exon12;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58252282 | 58252413 | 58252282 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58252581 | 58252883 | 58252581 | ID=MS.gene05454.t1.exon13;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58252581 | 58252883 | 58252581 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
chr6.4 | exon | 58253453 | 58253686 | 58253453 | ID=MS.gene05454.t1.exon14;Parent=MS.gene05454.t1 |
chr6.4 | CDS | 58253453 | 58253686 | 58253453 | ID=cds.MS.gene05454.t1;Parent=MS.gene05454.t1 |
Gene Sequence |
Protein sequence |