Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82754.t1 | XP_003600113.1 | 96.2 | 184 | 6 | 1 | 1 | 184 | 1 | 183 | 1.30E-90 | 342.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82754.t1 | G7IY22 | 96.2 | 184 | 6 | 1 | 1 | 184 | 1 | 183 | 9.2e-91 | 342.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057444 | MS.gene82754 | 0.801133 | 1.04E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82754.t1 | MTR_3g052260 | 96.196 | 184 | 6 | 1 | 1 | 184 | 1 | 183 | 3.84e-128 | 357 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82754.t1 | AT4G26965 | 58.065 | 186 | 74 | 2 | 1 | 184 | 1 | 184 | 3.03e-67 | 203 |
| MS.gene82754.t1 | AT4G26965 | 59.732 | 149 | 56 | 2 | 38 | 184 | 1 | 147 | 1.51e-49 | 157 |
Find 46 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGATGGGTGGTGTTTA+AGG | 0.097388 | 3.1:-38868983 | MS.gene82754:CDS |
| ACCATCAATTTGTTCATTTC+TGG | 0.124667 | 3.1:+38870172 | None:intergenic |
| GGTTGAATGGGCAGCGTAAA+AGG | 0.231907 | 3.1:-38868798 | MS.gene82754:CDS |
| TCTGACTCTACTTCCTTCTT+TGG | 0.233751 | 3.1:+38866475 | None:intergenic |
| AGGGTACTTGGGAAGATTAC+TGG | 0.298626 | 3.1:-38870251 | MS.gene82754:CDS |
| GTTGGAGGCTGCCAGGTTCC+AGG | 0.321767 | 3.1:+38864695 | None:intergenic |
| ACCAGAAATGAACAAATTGA+TGG | 0.357823 | 3.1:-38870173 | MS.gene82754:CDS |
| ATTTCAGGAACAGATGGAAT+TGG | 0.371401 | 3.1:-38866758 | MS.gene82754:intron |
| AAGAGATGGGTGGTGTTTAA+GGG | 0.371563 | 3.1:-38868982 | MS.gene82754:CDS |
| TTCAGGACTTCAGAGCCAAC+TGG | 0.399229 | 3.1:-38864737 | MS.gene82754:intron |
| ATGGCTGGTGTGGATAAAAC+TGG | 0.401451 | 3.1:-38870209 | MS.gene82754:CDS |
| TCCTAGTGAAAGAGAAGAGA+TGG | 0.447561 | 3.1:-38868996 | MS.gene82754:intron |
| CATGATCCTACATCCATTCC+AGG | 0.453705 | 3.1:-38868955 | MS.gene82754:intron |
| GAATGGATATGTTGGTTGAA+TGG | 0.457830 | 3.1:-38868811 | MS.gene82754:CDS |
| TTTCAATTTACCTCTGGAGT+TGG | 0.471997 | 3.1:+38868772 | None:intergenic |
| ACTTCAGAGCCAACTGGGTC+AGG | 0.472998 | 3.1:-38864731 | MS.gene82754:CDS |
| AATGGATATGTTGGTTGAAT+GGG | 0.479178 | 3.1:-38868810 | MS.gene82754:CDS |
| TGACTACCTTCGGAAGAAAC+CGG | 0.488607 | 3.1:+38866304 | None:intergenic |
| GTTGTTCACCAATCGAACTA+TGG | 0.489049 | 3.1:-38870228 | MS.gene82754:CDS |
| CATAAAATATATACCTGGAA+TGG | 0.499350 | 3.1:+38868942 | None:intergenic |
| TATTTCCATGCAGAAAATGT+TGG | 0.500463 | 3.1:-38866361 | MS.gene82754:intron |
| ATATCAAGTTGGAGGCTGCC+AGG | 0.502660 | 3.1:+38864688 | None:intergenic |
| CAGTTTCCGGTTTCTTCCGA+AGG | 0.522530 | 3.1:-38866310 | MS.gene82754:intron |
| TTCACCAATCGAACTATGGC+TGG | 0.525835 | 3.1:-38870224 | MS.gene82754:CDS |
| TATATACCTGGAATGGATGT+AGG | 0.527072 | 3.1:+38868949 | None:intergenic |
| GTTGAATGGGCAGCGTAAAA+GGG | 0.537561 | 3.1:-38868797 | MS.gene82754:CDS |
| AGTTCTCAAGAAAGAAGAAG+AGG | 0.538559 | 3.1:-38866507 | MS.gene82754:CDS |
| GGGTACTTGGGAAGATTACT+GGG | 0.540612 | 3.1:-38870250 | MS.gene82754:CDS |
| TTATTCATTTCAGGAACAGA+TGG | 0.543667 | 3.1:-38866764 | MS.gene82754:intron |
| GTCCTCCCATATCAAGTTGG+AGG | 0.544140 | 3.1:+38864680 | None:intergenic |
| GAGGAAAGGAAAGCCAAAGA+AGG | 0.545436 | 3.1:-38866488 | MS.gene82754:CDS |
| CACACCAGCCATAGTTCGAT+TGG | 0.548606 | 3.1:+38870220 | None:intergenic |
| CAATCGAACTATGGCTGGTG+TGG | 0.548825 | 3.1:-38870219 | MS.gene82754:CDS |
| TTCCATGCAGAAAATGTTGG+TGG | 0.555780 | 3.1:-38866358 | MS.gene82754:intron |
| TCAAGAAAGAAGAAGAGGAA+AGG | 0.573085 | 3.1:-38866502 | MS.gene82754:CDS |
| CTCAAGTCTTCGCTTGTGCT+AGG | 0.578863 | 3.1:+38866076 | None:intergenic |
| TCAGGACTTCAGAGCCAACT+GGG | 0.590500 | 3.1:-38864736 | MS.gene82754:intron |
| CCTAGTGAAAGAGAAGAGAT+GGG | 0.599846 | 3.1:-38868995 | MS.gene82754:intron |
| GTCAGACGTGTCGTCAACAC+TGG | 0.609145 | 3.1:-38866458 | MS.gene82754:intron |
| AAAGATGCACCTGACCCAGT+TGG | 0.611828 | 3.1:+38864722 | None:intergenic |
| AAGGTCCTCCCATATCAAGT+TGG | 0.614882 | 3.1:+38864677 | None:intergenic |
| CTAGCACAAGCGAAGACTTG+AGG | 0.619969 | 3.1:-38866075 | MS.gene82754:intron |
| TTTCTCAAACATAGGTAACG+AGG | 0.670056 | 3.1:-38866110 | MS.gene82754:intron |
| TAAAAGGGCTCCAACTCCAG+AGG | 0.675471 | 3.1:-38868782 | MS.gene82754:intron |
| TGGCTGGTGTGGATAAAACT+GGG | 0.698720 | 3.1:-38870208 | MS.gene82754:CDS |
| AGTGAAAGAGAAGAGATGGG+TGG | 0.731002 | 3.1:-38868992 | MS.gene82754:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATTATATCAAAATTAT+TGG | + | chr3.1:38869817-38869836 | None:intergenic | 10.0% |
| !! | TTAAAAGTTTAAATTCAATA+GGG | + | chr3.1:38865709-38865728 | None:intergenic | 10.0% |
| !! | TTTAAAAAAATTGATAGATA+AGG | + | chr3.1:38868274-38868293 | None:intergenic | 10.0% |
| !!! | AATTTTGATATAATCTTTTT+AGG | - | chr3.1:38869819-38869838 | MS.gene82754:intron | 10.0% |
| !!! | ATTTTGATATAATCTTTTTA+GGG | - | chr3.1:38869820-38869839 | MS.gene82754:intron | 10.0% |
| !!! | ATTTTTTTTTTTTTTTGAGA+AGG | - | chr3.1:38867675-38867694 | MS.gene82754:intron | 10.0% |
| !!! | TAATTTGTTAAAGATAATTA+AGG | + | chr3.1:38867050-38867069 | None:intergenic | 10.0% |
| !! | AATGAAATTCCATTAAATTA+AGG | + | chr3.1:38869064-38869083 | None:intergenic | 15.0% |
| !! | ATGAAATTCCATTAAATTAA+GGG | + | chr3.1:38869063-38869082 | None:intergenic | 15.0% |
| !! | ATTCTATTTCATATTATTGA+TGG | - | chr3.1:38866089-38866108 | MS.gene82754:CDS | 15.0% |
| !! | CTTAAAAGTTTAAATTCAAT+AGG | + | chr3.1:38865710-38865729 | None:intergenic | 15.0% |
| !! | GAAAAATAAATTAAAGATAG+TGG | + | chr3.1:38867507-38867526 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTTACTTACTTTT+AGG | - | chr3.1:38868548-38868567 | MS.gene82754:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | - | chr3.1:38865062-38865081 | MS.gene82754:intron | 15.0% |
| !!! | TGAATTTAAACTTTTAAGAA+GGG | - | chr3.1:38865712-38865731 | MS.gene82754:intron | 15.0% |
| !!! | TGTTAATTATTTTAGTTGAA+TGG | - | chr3.1:38866120-38866139 | MS.gene82754:intron | 15.0% |
| !!! | TGTTTCTAAGATAATATATT+TGG | - | chr3.1:38866987-38867006 | MS.gene82754:intron | 15.0% |
| !!! | TTGAATTTAAACTTTTAAGA+AGG | - | chr3.1:38865711-38865730 | MS.gene82754:intron | 15.0% |
| !! | AAAAAAATTGATAGATAAGG+TGG | + | chr3.1:38868271-38868290 | None:intergenic | 20.0% |
| !! | ATGAAAATAGTTTAAACAAG+AGG | + | chr3.1:38869103-38869122 | None:intergenic | 20.0% |
| !! | GAAAAACAATAAGATTAGTA+GGG | - | chr3.1:38867626-38867645 | MS.gene82754:intron | 20.0% |
| !! | TAAACACAAGCATATATTAA+AGG | + | chr3.1:38864837-38864856 | None:intergenic | 20.0% |
| !! | TAATATATGCTTGTGTTTAT+TGG | - | chr3.1:38864838-38864857 | MS.gene82754:intron | 20.0% |
| !! | TGAAAAACAATAAGATTAGT+AGG | - | chr3.1:38867625-38867644 | MS.gene82754:intron | 20.0% |
| !! | TGAAAATAGTTTAAACAAGA+GGG | + | chr3.1:38869102-38869121 | None:intergenic | 20.0% |
| !! | TTCTCTTAATATTACTTAGA+GGG | - | chr3.1:38866700-38866719 | MS.gene82754:intron | 20.0% |
| !! | TTGAAAAAATCTCTATTGTT+TGG | - | chr3.1:38866338-38866357 | MS.gene82754:CDS | 20.0% |
| !! | TTGTTATATTGCTATAACAT+AGG | - | chr3.1:38866310-38866329 | MS.gene82754:intron | 20.0% |
| !! | TTTAGTAATATGTAACAAAC+TGG | + | chr3.1:38869777-38869796 | None:intergenic | 20.0% |
| !! | TTTCCTTTATAAAATAGTTC+AGG | - | chr3.1:38869646-38869665 | MS.gene82754:intron | 20.0% |
| !! | TTTCTCTTAATATTACTTAG+AGG | - | chr3.1:38866699-38866718 | MS.gene82754:intron | 20.0% |
| !!! | AATGTAACATTTTAAAACCA+TGG | - | chr3.1:38865838-38865857 | MS.gene82754:intron | 20.0% |
| !!! | ATATTGATTCCTAAGATTAA+AGG | + | chr3.1:38867947-38867966 | None:intergenic | 20.0% |
| !!! | ATTGCTTTTTTATTCATTTC+AGG | - | chr3.1:38868175-38868194 | MS.gene82754:intron | 20.0% |
| !!! | ATTTAACGATTTGTTCAATA+AGG | - | chr3.1:38866433-38866452 | MS.gene82754:intron | 20.0% |
| !!! | ATTTAATAGTTGATACAAAG+AGG | + | chr3.1:38867370-38867389 | None:intergenic | 20.0% |
| !!! | ATTTGGTAATACTTTGATAA+AGG | - | chr3.1:38865382-38865401 | MS.gene82754:intron | 20.0% |
| !!! | CTTTTTTTCCCTTAATTTAA+TGG | - | chr3.1:38869052-38869071 | MS.gene82754:intron | 20.0% |
| !!! | GTTTGTAAAATTTTACTTTC+AGG | - | chr3.1:38870194-38870213 | MS.gene82754:CDS | 20.0% |
| !!! | TGAAAAACACTATTTTTATG+AGG | + | chr3.1:38867436-38867455 | None:intergenic | 20.0% |
| !!! | TTATGGGTTTTATTGATTTT+TGG | - | chr3.1:38864863-38864882 | MS.gene82754:intron | 20.0% |
| !!! | TTTGGTAATACTTTGATAAA+GGG | - | chr3.1:38865383-38865402 | MS.gene82754:intron | 20.0% |
| ! | AACTTGAATCAAACATAGAT+TGG | - | chr3.1:38868752-38868771 | MS.gene82754:intron | 25.0% |
| ! | AAGGACGATTACTAAAAAAA+AGG | - | chr3.1:38868015-38868034 | MS.gene82754:intron | 25.0% |
| ! | AAGTTTAAATTCAATAGGGT+TGG | + | chr3.1:38865705-38865724 | None:intergenic | 25.0% |
| ! | AGCAAAATGTTATCAAATAG+TGG | - | chr3.1:38866376-38866395 | MS.gene82754:intron | 25.0% |
| ! | AGTAAAATAAGTAAGAACCA+TGG | + | chr3.1:38865858-38865877 | None:intergenic | 25.0% |
| ! | AGTAATGATATGAACTATGA+GGG | + | chr3.1:38870158-38870177 | None:intergenic | 25.0% |
| ! | AGTAATGATTCTACTTCTTA+GGG | + | chr3.1:38869176-38869195 | None:intergenic | 25.0% |
| ! | ATCACATGTATTAATAGATG+TGG | + | chr3.1:38866071-38866090 | None:intergenic | 25.0% |
| ! | CATAAAATATATACCTGGAA+TGG | + | chr3.1:38866009-38866028 | None:intergenic | 25.0% |
| ! | CTAACATTAAAACCTATTAG+AGG | - | chr3.1:38867165-38867184 | MS.gene82754:intron | 25.0% |
| ! | CTATAATAATTTCACTTAGC+TGG | + | chr3.1:38868145-38868164 | None:intergenic | 25.0% |
| ! | CTGATAGGAATTTAAGAAAA+TGG | - | chr3.1:38865139-38865158 | MS.gene82754:intron | 25.0% |
| ! | CTTGTGTTTATTGGATTTAT+GGG | - | chr3.1:38864847-38864866 | MS.gene82754:intron | 25.0% |
| ! | GAACATATATATCAAACCAT+AGG | + | chr3.1:38865336-38865355 | None:intergenic | 25.0% |
| ! | GAAGTTAATTTCAGAATGAA+CGG | + | chr3.1:38867026-38867045 | None:intergenic | 25.0% |
| ! | GTGAATTATAACTAATGCTT+GGG | - | chr3.1:38867298-38867317 | MS.gene82754:intron | 25.0% |
| ! | TAATACTTTGATAAAGGGTT+TGG | - | chr3.1:38865388-38865407 | MS.gene82754:intron | 25.0% |
| ! | TAATTTGGTATCCCTTTAAA+AGG | - | chr3.1:38867996-38868015 | MS.gene82754:intron | 25.0% |
| ! | TAGTAATGATTCTACTTCTT+AGG | + | chr3.1:38869177-38869196 | None:intergenic | 25.0% |
| ! | TAGTTATAATTCACCTCATA+TGG | + | chr3.1:38867292-38867311 | None:intergenic | 25.0% |
| ! | TATGTCCAAGTGTTTATATT+TGG | - | chr3.1:38869751-38869770 | MS.gene82754:intron | 25.0% |
| ! | TCATAACATATTTCAGACTA+AGG | - | chr3.1:38866734-38866753 | MS.gene82754:CDS | 25.0% |
| ! | TGAATTGGAAGAAAATTTCA+TGG | - | chr3.1:38867921-38867940 | MS.gene82754:intron | 25.0% |
| ! | TGCAAAACTTATTCATGAAT+TGG | - | chr3.1:38868059-38868078 | MS.gene82754:intron | 25.0% |
| !! | AATCAACTTCCCTATATTTT+TGG | + | chr3.1:38866941-38866960 | None:intergenic | 25.0% |
| !! | ACATTTTCTTTCTCAAACAT+AGG | - | chr3.1:38868830-38868849 | MS.gene82754:intron | 25.0% |
| !! | ACTCCTGAACTATTTTATAA+AGG | + | chr3.1:38869652-38869671 | None:intergenic | 25.0% |
| !! | CATTCCAGGTATATATTTTA+TGG | - | chr3.1:38866007-38866026 | MS.gene82754:intron | 25.0% |
| !! | GTAAGATGCTTAAATTTTGA+TGG | - | chr3.1:38868512-38868531 | MS.gene82754:intron | 25.0% |
| !! | GTTCAATAAGGACAAAATTT+TGG | - | chr3.1:38866445-38866464 | MS.gene82754:intron | 25.0% |
| !! | TCTTCTTAAGGTTTAGAATT+TGG | - | chr3.1:38865365-38865384 | MS.gene82754:intron | 25.0% |
| !! | TTAGTAATCGTCCTTTTAAA+GGG | + | chr3.1:38868010-38868029 | None:intergenic | 25.0% |
| !! | TTGATGTCTTTTATTCTTTG+TGG | - | chr3.1:38869609-38869628 | MS.gene82754:intron | 25.0% |
| !! | TTTAGTAATCGTCCTTTTAA+AGG | + | chr3.1:38868011-38868030 | None:intergenic | 25.0% |
| !!! | AAATAGTGTTTTTCAAGTTG+AGG | - | chr3.1:38867386-38867405 | MS.gene82754:intron | 25.0% |
| !!! | ACAAAATTTTGGCTAAGATA+GGG | - | chr3.1:38866456-38866475 | MS.gene82754:intron | 25.0% |
| !!! | ACTATTTTCATGAATTTGCT+AGG | - | chr3.1:38869112-38869131 | MS.gene82754:intron | 25.0% |
| !!! | GAAATCTTTAGAACTCTTTA+TGG | + | chr3.1:38867082-38867101 | None:intergenic | 25.0% |
| !!! | TGTCTGATTATACTTGTTTT+TGG | - | chr3.1:38865927-38865946 | MS.gene82754:intron | 25.0% |
| !!! | TTTTAGTTGAATGGATATGT+TGG | - | chr3.1:38866129-38866148 | MS.gene82754:intron | 25.0% |
| AACAATAAGATGACTACCTT+CGG | + | chr3.1:38868657-38868676 | None:intergenic | 30.0% | |
| AATAGTTTAAACAAGAGGGT+TGG | + | chr3.1:38869098-38869117 | None:intergenic | 30.0% | |
| AATGCATTTCAATTTACCTC+TGG | + | chr3.1:38866185-38866204 | None:intergenic | 30.0% | |
| ACCAGAAATGAACAAATTGA+TGG | - | chr3.1:38864775-38864794 | MS.gene82754:intron | 30.0% | |
| ACCTAATTGTATCATCAAAC+CGG | + | chr3.1:38867803-38867822 | None:intergenic | 30.0% | |
| ACTCTTTCAATCATAAGTGT+TGG | - | chr3.1:38865206-38865225 | MS.gene82754:intron | 30.0% | |
| ATAGAGCGAAGAAACATATA+TGG | + | chr3.1:38869560-38869579 | None:intergenic | 30.0% | |
| ATTCTATACAAAGAGACAGA+GGG | + | chr3.1:38867338-38867357 | None:intergenic | 30.0% | |
| ATTTCAGAATGAACGGTAAT+TGG | + | chr3.1:38867019-38867038 | None:intergenic | 30.0% | |
| ATTTCATGGCCTTTAATCTT+AGG | - | chr3.1:38867935-38867954 | MS.gene82754:intron | 30.0% | |
| CGTTCAACTGCTAAAATTAT+TGG | - | chr3.1:38866037-38866056 | MS.gene82754:intron | 30.0% | |
| GAGTAATGATATGAACTATG+AGG | + | chr3.1:38870159-38870178 | None:intergenic | 30.0% | |
| GATTACCAAAATATTGTCAC+AGG | + | chr3.1:38869154-38869173 | None:intergenic | 30.0% | |
| GCTACCATAAAATATATACC+TGG | + | chr3.1:38866014-38866033 | None:intergenic | 30.0% | |
| GCTTGTGTTTATTGGATTTA+TGG | - | chr3.1:38864846-38864865 | MS.gene82754:intron | 30.0% | |
| GGAGTTTATTCAGAAAATAG+TGG | - | chr3.1:38866492-38866511 | MS.gene82754:CDS | 30.0% | |
| GGGAAAAAAAGACATAAGAA+AGG | + | chr3.1:38869043-38869062 | None:intergenic | 30.0% | |
| GGTGAATTATAACTAATGCT+TGG | - | chr3.1:38867297-38867316 | MS.gene82754:intron | 30.0% | |
| GGTGCTAAAATATACTCATA+TGG | - | chr3.1:38865227-38865246 | MS.gene82754:CDS | 30.0% | |
| GGTTCATTCATGATATCATT+TGG | - | chr3.1:38865801-38865820 | MS.gene82754:intron | 30.0% | |
| TAACCACTATTTAACAACAC+TGG | + | chr3.1:38866285-38866304 | None:intergenic | 30.0% | |
| TAATATTACTTAGAGGGCAA+TGG | - | chr3.1:38866706-38866725 | MS.gene82754:intron | 30.0% | |
| TAGTAGTAAGTAGTAACAGT+GGG | - | chr3.1:38865443-38865462 | MS.gene82754:intron | 30.0% | |
| TATATGCTCGTTCATAAATC+TGG | - | chr3.1:38870068-38870087 | MS.gene82754:intron | 30.0% | |
| TATGAAACACATATACTCCT+CGG | - | chr3.1:38864992-38865011 | MS.gene82754:intron | 30.0% | |
| TATTTCAGACTAAGGAAACA+AGG | - | chr3.1:38866742-38866761 | MS.gene82754:CDS | 30.0% | |
| TATTTCCATGCAGAAAATGT+TGG | - | chr3.1:38868587-38868606 | MS.gene82754:intron | 30.0% | |
| TCTCTGTATAGAACTAAACT+TGG | + | chr3.1:38868391-38868410 | None:intergenic | 30.0% | |
| TGTCACGTTAGTTGTTAATT+TGG | - | chr3.1:38867981-38868000 | MS.gene82754:intron | 30.0% | |
| TTATTCATTTCAGGAACAGA+TGG | - | chr3.1:38868184-38868203 | MS.gene82754:intron | 30.0% | |
| TTCTCTTTGATCACTAAGAT+TGG | + | chr3.1:38865591-38865610 | None:intergenic | 30.0% | |
| TTGATAAAATCCTAGTGTTC+CGG | - | chr3.1:38867781-38867800 | MS.gene82754:intron | 30.0% | |
| TTGATACAAAGAGGACATTT+GGG | + | chr3.1:38867361-38867380 | None:intergenic | 30.0% | |
| ! | AATGGATATGTTGGTTGAAT+GGG | - | chr3.1:38866138-38866157 | MS.gene82754:intron | 30.0% |
| ! | ACCATCAATTTGTTCATTTC+TGG | + | chr3.1:38864779-38864798 | None:intergenic | 30.0% |
| ! | ACTAGATTTTCCTTTTCTCA+GGG | - | chr3.1:38867219-38867238 | MS.gene82754:intron | 30.0% |
| ! | AGGACCTTTATTTAAATCTG+GGG | - | chr3.1:38865556-38865575 | MS.gene82754:intron | 30.0% |
| ! | ATAACTGCATAAAAGTGTGT+TGG | - | chr3.1:38865174-38865193 | MS.gene82754:intron | 30.0% |
| ! | CAGGACCTTTATTTAAATCT+GGG | - | chr3.1:38865555-38865574 | MS.gene82754:intron | 30.0% |
| ! | GACAATCTTTCTTTTGTTGA+AGG | - | chr3.1:38869505-38869524 | MS.gene82754:intron | 30.0% |
| ! | GTTTGATGATACAATTAGGT+GGG | - | chr3.1:38867803-38867822 | MS.gene82754:intron | 30.0% |
| ! | TCAGGACCTTTATTTAAATC+TGG | - | chr3.1:38865554-38865573 | MS.gene82754:intron | 30.0% |
| ! | TGTTTTATAAATGCTGAGCT+TGG | - | chr3.1:38865270-38865289 | MS.gene82754:intron | 30.0% |
| !! | AGCTTTAAAATGCAATGCTT+TGG | - | chr3.1:38867566-38867585 | MS.gene82754:intron | 30.0% |
| !! | ATGTGATTTTAAGGGTAACA+TGG | - | chr3.1:38867873-38867892 | MS.gene82754:intron | 30.0% |
| !! | CTTTAAAATGCAATGCTTTG+GGG | - | chr3.1:38867568-38867587 | MS.gene82754:intron | 30.0% |
| !! | GCTTTAAAATGCAATGCTTT+GGG | - | chr3.1:38867567-38867586 | MS.gene82754:intron | 30.0% |
| !!! | ATTTTTGGTGTATGCCAAAA+GGG | - | chr3.1:38864878-38864897 | MS.gene82754:intron | 30.0% |
| !!! | GACAAAATTTTGGCTAAGAT+AGG | - | chr3.1:38866455-38866474 | MS.gene82754:intron | 30.0% |
| !!! | TGCATAAAACTTTTCAAGTC+TGG | + | chr3.1:38868617-38868636 | None:intergenic | 30.0% |
| AACTATGAGGGTTAGAACTT+GGG | + | chr3.1:38870146-38870165 | None:intergenic | 35.0% | |
| AAGAGATTGCACTGAATATG+AGG | + | chr3.1:38866841-38866860 | None:intergenic | 35.0% | |
| AATGTTAGAACTGTTGCAAG+AGG | + | chr3.1:38867153-38867172 | None:intergenic | 35.0% | |
| ACCAAGACTGAAGTGATATA+TGG | + | chr3.1:38867749-38867768 | None:intergenic | 35.0% | |
| ACTGGCCAAATATAAACACT+TGG | + | chr3.1:38869759-38869778 | None:intergenic | 35.0% | |
| AGATTAGTAGGGATACTTGA+AGG | - | chr3.1:38867637-38867656 | MS.gene82754:intron | 35.0% | |
| AGTGGTTATAGCATAGCATA+GGG | - | chr3.1:38866394-38866413 | MS.gene82754:intron | 35.0% | |
| AGTTCTCAAGAAAGAAGAAG+AGG | - | chr3.1:38868441-38868460 | MS.gene82754:intron | 35.0% | |
| ATACTTGTGATTGTGTACTC+TGG | - | chr3.1:38869478-38869497 | MS.gene82754:intron | 35.0% | |
| ATGAAACACATATACTCCTC+GGG | - | chr3.1:38864993-38865012 | MS.gene82754:intron | 35.0% | |
| ATTTCAGGAACAGATGGAAT+TGG | - | chr3.1:38868190-38868209 | MS.gene82754:intron | 35.0% | |
| CACTATAAATGCACATGTGT+TGG | - | chr3.1:38867835-38867854 | MS.gene82754:intron | 35.0% | |
| CTTCATAAGTAGACTCTGAT+AGG | - | chr3.1:38865124-38865143 | MS.gene82754:intron | 35.0% | |
| GACACCCCAGATTTAAATAA+AGG | + | chr3.1:38865563-38865582 | None:intergenic | 35.0% | |
| GATTCTATACAAAGAGACAG+AGG | + | chr3.1:38867339-38867358 | None:intergenic | 35.0% | |
| GGAATTCGGCCAAAAATATA+GGG | - | chr3.1:38866929-38866948 | MS.gene82754:intron | 35.0% | |
| GTAGTAGTAAGTAGTAACAG+TGG | - | chr3.1:38865442-38865461 | MS.gene82754:intron | 35.0% | |
| GTTGATACAAAGAGGACATT+TGG | + | chr3.1:38867362-38867381 | None:intergenic | 35.0% | |
| TAACCATTTCATCTTTCTGC+AGG | - | chr3.1:38869683-38869702 | MS.gene82754:intron | 35.0% | |
| TAGGTAGGTGTTTAGTGAAT+TGG | - | chr3.1:38867906-38867925 | MS.gene82754:intron | 35.0% | |
| TAGTGGTTATAGCATAGCAT+AGG | - | chr3.1:38866393-38866412 | MS.gene82754:intron | 35.0% | |
| TATATACCTGGAATGGATGT+AGG | + | chr3.1:38866002-38866021 | None:intergenic | 35.0% | |
| TATCAGTGTCGTGTCTAATT+GGG | + | chr3.1:38864962-38864981 | None:intergenic | 35.0% | |
| TCAAGAAAGAAGAAGAGGAA+AGG | - | chr3.1:38868446-38868465 | MS.gene82754:intron | 35.0% | |
| TCACTTGATTTAACCCACTT+GGG | + | chr3.1:38869444-38869463 | None:intergenic | 35.0% | |
| TCCAATGTAATCACATGTGT+CGG | + | chr3.1:38865037-38865056 | None:intergenic | 35.0% | |
| TCCATATATCACTTCAGTCT+TGG | - | chr3.1:38867745-38867764 | MS.gene82754:intron | 35.0% | |
| TGATACAATTAGGTGGGAAT+CGG | - | chr3.1:38867809-38867828 | MS.gene82754:intron | 35.0% | |
| TGGAATTCGGCCAAAAATAT+AGG | - | chr3.1:38866928-38866947 | MS.gene82754:intron | 35.0% | |
| TTCTACTGTCACTCTTCTTA+AGG | - | chr3.1:38865353-38865372 | MS.gene82754:intron | 35.0% | |
| TTCTATACAAAGAGACAGAG+GGG | + | chr3.1:38867337-38867356 | None:intergenic | 35.0% | |
| TTGATCACTAAGATTGGACT+AGG | + | chr3.1:38865585-38865604 | None:intergenic | 35.0% | |
| TTTCTCAAACATAGGTAACG+AGG | - | chr3.1:38868838-38868857 | MS.gene82754:intron | 35.0% | |
| TTTGTGGTTAATGGTTCCTA+TGG | - | chr3.1:38865317-38865336 | MS.gene82754:intron | 35.0% | |
| ! | ACTTGTGATTTGTAAGTTGC+AGG | - | chr3.1:38865662-38865681 | MS.gene82754:intron | 35.0% |
| ! | AGGCATGGATGTGATTTTAA+GGG | - | chr3.1:38867865-38867884 | MS.gene82754:intron | 35.0% |
| ! | AGGGAAGTTGATTGCAATTA+TGG | - | chr3.1:38866948-38866967 | MS.gene82754:intron | 35.0% |
| ! | ATAGTGGTGCAACTTTTATG+AGG | + | chr3.1:38867491-38867510 | None:intergenic | 35.0% |
| ! | CTAGATTTTCCTTTTCTCAG+GGG | - | chr3.1:38867220-38867239 | MS.gene82754:intron | 35.0% |
| ! | GAATGGATATGTTGGTTGAA+TGG | - | chr3.1:38866137-38866156 | MS.gene82754:intron | 35.0% |
| ! | GACTAGATTTTCCTTTTCTC+AGG | - | chr3.1:38867218-38867237 | MS.gene82754:intron | 35.0% |
| ! | GAGGAGTATATGTGTTTCAT+AGG | + | chr3.1:38864993-38865012 | None:intergenic | 35.0% |
| ! | GGTTACTCGATTTTGTAACA+GGG | - | chr3.1:38868080-38868099 | MS.gene82754:intron | 35.0% |
| ! | GGTTTGATGATACAATTAGG+TGG | - | chr3.1:38867802-38867821 | MS.gene82754:intron | 35.0% |
| ! | GTGTTCCTGTGACAATATTT+TGG | - | chr3.1:38869146-38869165 | MS.gene82754:intron | 35.0% |
| ! | TAGCCAGTGTTGTTAAATAG+TGG | - | chr3.1:38866279-38866298 | MS.gene82754:intron | 35.0% |
| ! | TCCGGTTTGATGATACAATT+AGG | - | chr3.1:38867799-38867818 | MS.gene82754:intron | 35.0% |
| ! | TGGTTACTCGATTTTGTAAC+AGG | - | chr3.1:38868079-38868098 | MS.gene82754:intron | 35.0% |
| !! | AAGTTTTATGCAGCAGTTTC+CGG | - | chr3.1:38868625-38868644 | MS.gene82754:intron | 35.0% |
| !! | GATTTTAAGGGTAACATGGT+TGG | - | chr3.1:38867877-38867896 | MS.gene82754:intron | 35.0% |
| !! | TTTCAATTTACCTCTGGAGT+TGG | + | chr3.1:38866179-38866198 | None:intergenic | 35.0% |
| !!! | GATTTTTGGTGTATGCCAAA+AGG | - | chr3.1:38864877-38864896 | MS.gene82754:intron | 35.0% |
| !!! | GCAAGGTTTTTTGTGGTTAA+TGG | - | chr3.1:38865308-38865327 | MS.gene82754:intron | 35.0% |
| !!! | TTATTTTTTGTCTCACGCTC+TGG | - | chr3.1:38866877-38866896 | MS.gene82754:intron | 35.0% |
| AAATATTGTCACAGGCTCTC+CGG | + | chr3.1:38869259-38869278 | None:intergenic | 40.0% | |
| AACTTTCCTCAGTCCATATG+AGG | - | chr3.1:38867276-38867295 | MS.gene82754:intron | 40.0% | |
| AAGAGATGGGTGGTGTTTAA+GGG | - | chr3.1:38865966-38865985 | MS.gene82754:intron | 40.0% | |
| AAGGAAACAAGGAATGCAGT+AGG | - | chr3.1:38866753-38866772 | MS.gene82754:CDS | 40.0% | |
| AATGCACATGTGTTGGACTT+TGG | - | chr3.1:38867842-38867861 | MS.gene82754:intron | 40.0% | |
| ACCGACACATGTGATTACAT+TGG | - | chr3.1:38865033-38865052 | MS.gene82754:intron | 40.0% | |
| ACTCCTGCAGAAAGATGAAA+TGG | + | chr3.1:38869689-38869708 | None:intergenic | 40.0% | |
| ATCACTAGTCACTACTGAGT+AGG | - | chr3.1:38866558-38866577 | MS.gene82754:intron | 40.0% | |
| ATCGCAGATTTCAGAAACAG+TGG | + | chr3.1:38866596-38866615 | None:intergenic | 40.0% | |
| CATCTTGCAAAACCACAATG+CGG | + | chr3.1:38865508-38865527 | None:intergenic | 40.0% | |
| CCTAGTGAAAGAGAAGAGAT+GGG | - | chr3.1:38865953-38865972 | MS.gene82754:intron | 40.0% | |
| GAACTATGAGGGTTAGAACT+TGG | + | chr3.1:38870147-38870166 | None:intergenic | 40.0% | |
| GCTAAATAGCCCACCTAAAT+TGG | - | chr3.1:38869231-38869250 | MS.gene82754:intron | 40.0% | |
| GGATGTTCGATACCTCTAAT+AGG | + | chr3.1:38867180-38867199 | None:intergenic | 40.0% | |
| GGCACTTACTTTGTAGTTTG+TGG | - | chr3.1:38869000-38869019 | MS.gene82754:intron | 40.0% | |
| GTAACATGGTTGGAGACATT+AGG | - | chr3.1:38867887-38867906 | MS.gene82754:intron | 40.0% | |
| GTATCAGTGTCGTGTCTAAT+TGG | + | chr3.1:38864963-38864982 | None:intergenic | 40.0% | |
| GTCACTTGATTTAACCCACT+TGG | + | chr3.1:38869445-38869464 | None:intergenic | 40.0% | |
| GTTGTTCACCAATCGAACTA+TGG | - | chr3.1:38864720-38864739 | MS.gene82754:CDS | 40.0% | |
| TATCACTTCAGTCTTGGTGA+TGG | - | chr3.1:38867751-38867770 | MS.gene82754:intron | 40.0% | |
| TATCATCAAACCGGAACACT+AGG | + | chr3.1:38867794-38867813 | None:intergenic | 40.0% | |
| TCCTAGTGAAAGAGAAGAGA+TGG | - | chr3.1:38865952-38865971 | MS.gene82754:intron | 40.0% | |
| TCTGACTCTACTTCCTTCTT+TGG | + | chr3.1:38868476-38868495 | None:intergenic | 40.0% | |
| TGCAAGATGAAAAACTGTCG+TGG | - | chr3.1:38865519-38865538 | MS.gene82754:intron | 40.0% | |
| TGGACTGAGGAAAGTTATCA+AGG | + | chr3.1:38867272-38867291 | None:intergenic | 40.0% | |
| TTCCATGCAGAAAATGTTGG+TGG | - | chr3.1:38868590-38868609 | MS.gene82754:intron | 40.0% | |
| TTGATTTAACCCACTTGGGT+TGG | + | chr3.1:38869440-38869459 | None:intergenic | 40.0% | |
| TTGTTTGATGCATGTTCTCG+TGG | - | chr3.1:38868933-38868952 | MS.gene82754:intron | 40.0% | |
| ! | AATTCACCTCATATGGACTG+AGG | + | chr3.1:38867285-38867304 | None:intergenic | 40.0% |
| ! | ATTTTATTCACCTCACTCCG+AGG | - | chr3.1:38865622-38865641 | MS.gene82754:intron | 40.0% |
| ! | CATCTTTTAAACCTGGAACC+TGG | - | chr3.1:38870242-38870261 | MS.gene82754:CDS | 40.0% |
| ! | GACCCTAGTAATCTGGAATT+CGG | - | chr3.1:38866915-38866934 | MS.gene82754:intron | 40.0% |
| ! | GAGAGCCTGTGACAATATTT+TGG | - | chr3.1:38869259-38869278 | MS.gene82754:intron | 40.0% |
| ! | GAGGCATGGATGTGATTTTA+AGG | - | chr3.1:38867864-38867883 | MS.gene82754:intron | 40.0% |
| ! | GCAATGCAAAAACACCCTTT+TGG | + | chr3.1:38864895-38864914 | None:intergenic | 40.0% |
| ! | TCAGGTGCATCTTTTAAACC+TGG | - | chr3.1:38870235-38870254 | MS.gene82754:CDS | 40.0% |
| !! | GCTATTTTCTGCTGCTAGAT+TGG | - | chr3.1:38865780-38865799 | MS.gene82754:intron | 40.0% |
| !! | GTTTGGTAGTGAAACTCTCA+TGG | - | chr3.1:38865405-38865424 | MS.gene82754:intron | 40.0% |
| !! | TTAGAGGTATCGAACATCCA+TGG | - | chr3.1:38867181-38867200 | MS.gene82754:intron | 40.0% |
| AAGTAGTAACAGTGGGCGTT+TGG | - | chr3.1:38865450-38865469 | MS.gene82754:intron | 45.0% | |
| ACACATATACTCCTCGGGTT+TGG | - | chr3.1:38864998-38865017 | MS.gene82754:intron | 45.0% | |
| ACGAGAACCATCTCATGCAA+CGG | + | chr3.1:38868343-38868362 | None:intergenic | 45.0% | |
| ACTGTTGCAAGAGGATTTGC+TGG | + | chr3.1:38867144-38867163 | None:intergenic | 45.0% | |
| AGATAGGGACAACTGTGTAG+CGG | - | chr3.1:38866471-38866490 | MS.gene82754:CDS | 45.0% | |
| AGTGAAAGAGAAGAGATGGG+TGG | - | chr3.1:38865956-38865975 | MS.gene82754:intron | 45.0% | |
| ATGAGGTCACAGTCAATCCA+TGG | + | chr3.1:38867419-38867438 | None:intergenic | 45.0% | |
| ATGGCTGGTGTGGATAAAAC+TGG | - | chr3.1:38864739-38864758 | MS.gene82754:intron | 45.0% | |
| CATGATCCTACATCCATTCC+AGG | - | chr3.1:38865993-38866012 | MS.gene82754:intron | 45.0% | |
| CATGGTTGGAGACATTAGGT+AGG | - | chr3.1:38867891-38867910 | MS.gene82754:intron | 45.0% | |
| CCCATCTCTTCTCTTTCACT+AGG | + | chr3.1:38865956-38865975 | None:intergenic | 45.0% | |
| GAAGAGATGGGTGGTGTTTA+AGG | - | chr3.1:38865965-38865984 | MS.gene82754:intron | 45.0% | |
| GAGGAAAGGAAAGCCAAAGA+AGG | - | chr3.1:38868460-38868479 | MS.gene82754:intron | 45.0% | |
| GGATTCCAAAACAACAGCAC+TGG | + | chr3.1:38869539-38869558 | None:intergenic | 45.0% | |
| GGCCGAATTCCAGATTACTA+GGG | + | chr3.1:38866920-38866939 | None:intergenic | 45.0% | |
| GGGTACTTGGGAAGATTACT+GGG | - | chr3.1:38864698-38864717 | MS.gene82754:CDS | 45.0% | |
| GTTGAATGGGCAGCGTAAAA+GGG | - | chr3.1:38866151-38866170 | MS.gene82754:intron | 45.0% | |
| TAAATGCTGAGCTTGGAGAC+TGG | - | chr3.1:38865277-38865296 | MS.gene82754:intron | 45.0% | |
| TATCGAACATCCATGGCACT+AGG | - | chr3.1:38867188-38867207 | MS.gene82754:intron | 45.0% | |
| TGACTACCTTCGGAAGAAAC+CGG | + | chr3.1:38868647-38868666 | None:intergenic | 45.0% | |
| TGAGGTCACAGTCAATCCAT+GGG | + | chr3.1:38867418-38867437 | None:intergenic | 45.0% | |
| TGGCCGAATTCCAGATTACT+AGG | + | chr3.1:38866921-38866940 | None:intergenic | 45.0% | |
| TGGCTGGTGTGGATAAAACT+GGG | - | chr3.1:38864740-38864759 | MS.gene82754:intron | 45.0% | |
| TTCACCAATCGAACTATGGC+TGG | - | chr3.1:38864724-38864743 | MS.gene82754:CDS | 45.0% | |
| TTTGTCACCGTTGCATGAGA+TGG | - | chr3.1:38868333-38868352 | MS.gene82754:intron | 45.0% | |
| ! | AGGGTACTTGGGAAGATTAC+TGG | - | chr3.1:38864697-38864716 | MS.gene82754:CDS | 45.0% |
| ! | ATTCTCTCCGGTGCCAATTT+AGG | + | chr3.1:38869360-38869379 | None:intergenic | 45.0% |
| ! | CTGTTGCAAGAGGATTTGCT+GGG | + | chr3.1:38867143-38867162 | None:intergenic | 45.0% |
| ! | GACCACCAACATTTTCTGCA+TGG | + | chr3.1:38868595-38868614 | None:intergenic | 45.0% |
| !! | ATTCAATAGGGTTGGCCAAG+TGG | + | chr3.1:38865697-38865716 | None:intergenic | 45.0% |
| !! | GTGATCCAGTGCTGTTGTTT+TGG | - | chr3.1:38869531-38869550 | MS.gene82754:intron | 45.0% |
| !! | TCAGTCTTGGTGATGGTCAT+CGG | - | chr3.1:38867758-38867777 | MS.gene82754:intron | 45.0% |
| !! | TGCAATGCTTTGGGGATGTT+TGG | - | chr3.1:38867576-38867595 | MS.gene82754:intron | 45.0% |
| !! | TGTTGCAAGAGGATTTGCTG+GGG | + | chr3.1:38867142-38867161 | None:intergenic | 45.0% |
| !!! | GGGAAAGGCAAGGTTTTTTG+TGG | - | chr3.1:38865301-38865320 | MS.gene82754:intron | 45.0% |
| !!! | AATAAATTAACTTTTAAAAA+AGG | + | chr3.1:38868726-38868745 | None:intergenic | 5.0% |
| !!! | ATTACTAAAAAAAATAATTT+TGG | - | chr3.1:38869788-38869807 | MS.gene82754:intron | 5.0% |
| !!! | TATTATTATTTTTTTTTTGA+AGG | - | chr3.1:38869952-38869971 | MS.gene82754:intron | 5.0% |
| !!! | TTCATAAATAAAATTATTTT+TGG | - | chr3.1:38868365-38868384 | MS.gene82754:intron | 5.0% |
| AAAGATGCACCTGACCCAGT+TGG | + | chr3.1:38870229-38870248 | None:intergenic | 50.0% | |
| AACTGTCGTGGCTCAAATCG+CGG | - | chr3.1:38865531-38865550 | MS.gene82754:intron | 50.0% | |
| AGCTCCGTCTTGCTTAACGA+AGG | - | chr3.1:38867527-38867546 | MS.gene82754:intron | 50.0% | |
| CAATCGAACTATGGCTGGTG+TGG | - | chr3.1:38864729-38864748 | MS.gene82754:CDS | 50.0% | |
| CACAAGCGAAGACTTGAGGT+TGG | - | chr3.1:38868877-38868896 | MS.gene82754:intron | 50.0% | |
| CACACCAGCCATAGTTCGAT+TGG | + | chr3.1:38864731-38864750 | None:intergenic | 50.0% | |
| CAGTTTCCGGTTTCTTCCGA+AGG | - | chr3.1:38868638-38868657 | MS.gene82754:intron | 50.0% | |
| CTAGCACAAGCGAAGACTTG+AGG | - | chr3.1:38868873-38868892 | MS.gene82754:intron | 50.0% | |
| CTCAAGTCTTCGCTTGTGCT+AGG | + | chr3.1:38868875-38868894 | None:intergenic | 50.0% | |
| CTCCGTCTTGCTTAACGAAG+GGG | - | chr3.1:38867529-38867548 | MS.gene82754:intron | 50.0% | |
| GCACATGTGTTGGACTTTGG+AGG | - | chr3.1:38867845-38867864 | MS.gene82754:intron | 50.0% | |
| GCTCCGTCTTGCTTAACGAA+GGG | - | chr3.1:38867528-38867547 | MS.gene82754:intron | 50.0% | |
| GCTTAACGAAGGGGGACAAT+GGG | - | chr3.1:38867538-38867557 | MS.gene82754:intron | 50.0% | |
| GGAAAGGGACCCTAGTAATC+TGG | - | chr3.1:38866908-38866927 | MS.gene82754:intron | 50.0% | |
| GGTTGAATGGGCAGCGTAAA+AGG | - | chr3.1:38866150-38866169 | MS.gene82754:intron | 50.0% | |
| GTCAGACTTACCTAGTGCCA+TGG | + | chr3.1:38867201-38867220 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr3.1:38869372-38869391 | None:intergenic | 50.0% | |
| TAAAAGGGCTCCAACTCCAG+AGG | - | chr3.1:38866166-38866185 | MS.gene82754:intron | 50.0% | |
| TAGCCCACCTAAATTGGCAC+CGG | - | chr3.1:38869237-38869256 | MS.gene82754:intron | 50.0% | |
| TCAAACCCCCACTATCTCCT+CGG | + | chr3.1:38865642-38865661 | None:intergenic | 50.0% | |
| TCAGGACTTCAGAGCCAACT+GGG | - | chr3.1:38870212-38870231 | MS.gene82754:CDS | 50.0% | |
| TCCCCCTTCGTTAAGCAAGA+CGG | + | chr3.1:38867534-38867553 | None:intergenic | 50.0% | |
| TCCGTCTTGCTTAACGAAGG+GGG | - | chr3.1:38867530-38867549 | MS.gene82754:intron | 50.0% | |
| TGCTTAACGAAGGGGGACAA+TGG | - | chr3.1:38867537-38867556 | MS.gene82754:intron | 50.0% | |
| TTCAGGACTTCAGAGCCAAC+TGG | - | chr3.1:38870211-38870230 | MS.gene82754:CDS | 50.0% | |
| ! | CAAGTTGAGGAATTCGCCCA+TGG | - | chr3.1:38867399-38867418 | MS.gene82754:intron | 50.0% |
| ! | TCTCCGGTGCCAATTTAGGT+GGG | + | chr3.1:38869243-38869262 | None:intergenic | 50.0% |
| ! | TGCAGGTGTTATGCTCCACT+TGG | - | chr3.1:38865679-38865698 | MS.gene82754:intron | 50.0% |
| ! | TGTGTTGGACTTTGGAGGCA+TGG | - | chr3.1:38867850-38867869 | MS.gene82754:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr3.1:38869413-38869432 | None:intergenic | 50.0% |
| ACCTCACTCCGAGGAGATAG+TGG | - | chr3.1:38865631-38865650 | MS.gene82754:intron | 55.0% | |
| ACTTCAGAGCCAACTGGGTC+AGG | - | chr3.1:38870217-38870236 | MS.gene82754:CDS | 55.0% | |
| AGACCCAAGCCAATACCACC+AGG | - | chr3.1:38869414-38869433 | MS.gene82754:intron | 55.0% | |
| AGCTTGGAGACTGGTGGGAA+AGG | - | chr3.1:38865286-38865305 | MS.gene82754:intron | 55.0% | |
| AGTGGGCGTTTGGAGAATCG+AGG | - | chr3.1:38865460-38865479 | MS.gene82754:intron | 55.0% | |
| ATGCTGAGCTTGGAGACTGG+TGG | - | chr3.1:38865280-38865299 | MS.gene82754:intron | 55.0% | |
| CCTCACTCCGAGGAGATAGT+GGG | - | chr3.1:38865632-38865651 | MS.gene82754:intron | 55.0% | |
| CGCGTGTCTGTGTTCAGAGT+GGG | + | chr3.1:38868964-38868983 | None:intergenic | 55.0% | |
| CGTGTCTGTGTTCAGAGTGG+GGG | + | chr3.1:38868962-38868981 | None:intergenic | 55.0% | |
| CTCACTCCGAGGAGATAGTG+GGG | - | chr3.1:38865633-38865652 | MS.gene82754:intron | 55.0% | |
| GCAAAACCACAATGCGGCCT+CGG | + | chr3.1:38865502-38865521 | None:intergenic | 55.0% | |
| GCGTGTCTGTGTTCAGAGTG+GGG | + | chr3.1:38868963-38868982 | None:intergenic | 55.0% | |
| GCTTGAGCTCCCCTGAGAAA+AGG | + | chr3.1:38867232-38867251 | None:intergenic | 55.0% | |
| GTCAGACGTGTCGTCAACAC+TGG | - | chr3.1:38868490-38868509 | MS.gene82754:intron | 55.0% | |
| GTGAAACGCAGCCTTAACCG+AGG | - | chr3.1:38865482-38865501 | MS.gene82754:intron | 55.0% | |
| TACTAGGGTCCCTTTCCCCT+AGG | + | chr3.1:38866905-38866924 | None:intergenic | 55.0% | |
| TGCTGAGCTTGGAGACTGGT+GGG | - | chr3.1:38865281-38865300 | MS.gene82754:intron | 55.0% | |
| ! | AGGCTCTCCGGTGCCAATTT+AGG | + | chr3.1:38869247-38869266 | None:intergenic | 55.0% |
| ! | CTCTCCGGTGCCAATTTAGG+TGG | + | chr3.1:38869244-38869263 | None:intergenic | 55.0% |
| ! | GCTCTGGTTCCTAGGGGAAA+GGG | - | chr3.1:38866893-38866912 | MS.gene82754:intron | 55.0% |
| ! | GTCTCACGCTCTGGTTCCTA+GGG | - | chr3.1:38866886-38866905 | MS.gene82754:intron | 55.0% |
| ! | TCACTCCGAGGAGATAGTGG+GGG | - | chr3.1:38865634-38865653 | MS.gene82754:intron | 55.0% |
| ! | TCTCACGCTCTGGTTCCTAG+GGG | - | chr3.1:38866887-38866906 | MS.gene82754:intron | 55.0% |
| ! | TGTCTCACGCTCTGGTTCCT+AGG | - | chr3.1:38866885-38866904 | MS.gene82754:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr3.1:38869414-38869433 | None:intergenic | 55.0% |
| !! | TGCAAGAGGATTTGCTGGGG+TGG | + | chr3.1:38867139-38867158 | None:intergenic | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr3.1:38869420-38869439 | None:intergenic | 55.0% |
| !! | TTAACCCACTTGGGTTGGCC+TGG | + | chr3.1:38869435-38869454 | None:intergenic | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr3.1:38869421-38869440 | None:intergenic | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | + | chr3.1:38869426-38869445 | None:intergenic | 55.0% |
| ACCACCAGGCCAACCCAAGT+GGG | - | chr3.1:38869428-38869447 | MS.gene82754:intron | 60.0% | |
| CCACAATGCGGCCTCGGTTA+AGG | + | chr3.1:38865496-38865515 | None:intergenic | 60.0% | |
| CCCACTATCTCCTCGGAGTG+AGG | + | chr3.1:38865635-38865654 | None:intergenic | 60.0% | |
| CCTTAACCGAGGCCGCATTG+TGG | - | chr3.1:38865493-38865512 | MS.gene82754:intron | 60.0% | |
| GCGCGTGTCTGTGTTCAGAG+TGG | + | chr3.1:38868965-38868984 | None:intergenic | 60.0% | |
| GGAGACTGGTGGGAAAGGCA+AGG | - | chr3.1:38865291-38865310 | MS.gene82754:intron | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | - | chr3.1:38869427-38869446 | MS.gene82754:intron | 60.0% | |
| TCAGACACACGCCAAACCCG+AGG | + | chr3.1:38865012-38865031 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCCG+AGG | - | chr3.1:38869379-38869398 | MS.gene82754:intron | 60.0% | |
| TCGTGGCTCAAATCGCGGTC+AGG | - | chr3.1:38865536-38865555 | MS.gene82754:intron | 60.0% | |
| ! | CGCTCTGGTTCCTAGGGGAA+AGG | - | chr3.1:38866892-38866911 | MS.gene82754:intron | 60.0% |
| ! | GGTCTTGGGAGTGTGCTCCT+CGG | + | chr3.1:38869399-38869418 | None:intergenic | 60.0% |
| GTGCTCCTCGGCAAGGTCTC+AGG | + | chr3.1:38869387-38869406 | None:intergenic | 65.0% | |
| GTTGGAGGCTGCCAGGTTCC+AGG | + | chr3.1:38870256-38870275 | None:intergenic | 65.0% | |
| ! | TGGGAGTGTGCTCCTCGGCA+AGG | + | chr3.1:38869394-38869413 | None:intergenic | 65.0% |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | + | chr3.1:38869432-38869451 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 38864691 | 38870279 | 38864691 | ID=MS.gene82754 |
| chr3.1 | mRNA | 38864691 | 38870279 | 38864691 | ID=MS.gene82754.t1;Parent=MS.gene82754 |
| chr3.1 | exon | 38870168 | 38870279 | 38870168 | ID=MS.gene82754.t1.exon1;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38870168 | 38870279 | 38870168 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38868956 | 38869012 | 38868956 | ID=MS.gene82754.t1.exon2;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38868956 | 38869012 | 38868956 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38868783 | 38868835 | 38868783 | ID=MS.gene82754.t1.exon3;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38868783 | 38868835 | 38868783 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38866722 | 38866773 | 38866722 | ID=MS.gene82754.t1.exon4;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38866722 | 38866773 | 38866722 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38866459 | 38866527 | 38866459 | ID=MS.gene82754.t1.exon5;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38866459 | 38866527 | 38866459 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38866311 | 38866370 | 38866311 | ID=MS.gene82754.t1.exon6;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38866311 | 38866370 | 38866311 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38866076 | 38866118 | 38866076 | ID=MS.gene82754.t1.exon7;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38866076 | 38866118 | 38866076 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38865221 | 38865265 | 38865221 | ID=MS.gene82754.t1.exon8;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38865221 | 38865265 | 38865221 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| chr3.1 | exon | 38864691 | 38864754 | 38864691 | ID=MS.gene82754.t1.exon9;Parent=MS.gene82754.t1 |
| chr3.1 | CDS | 38864691 | 38864754 | 38864691 | ID=cds.MS.gene82754.t1;Parent=MS.gene82754.t1 |
| Gene Sequence |
| Protein sequence |
