Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82775.t1 | XP_013450703.2 | 85.5 | 221 | 22 | 2 | 1 | 221 | 1 | 211 | 1.20E-96 | 363.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82775.t1 | Q9FIJ4 | 76.7 | 146 | 30 | 2 | 71 | 216 | 58 | 199 | 2.3e-59 | 230.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82775.t1 | I3SW06 | 85.5 | 221 | 22 | 2 | 1 | 221 | 1 | 211 | 8.8e-97 | 363.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053100 | MS.gene82775 | 0.815862 | 7.44E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82775.t1 | MTR_6g004130 | 90.826 | 218 | 10 | 3 | 2 | 219 | 1 | 208 | 3.34e-120 | 344 |
| MS.gene82775.t1 | MTR_4g035350 | 40.777 | 206 | 97 | 6 | 13 | 217 | 3 | 184 | 1.23e-42 | 145 |
| MS.gene82775.t1 | MTR_6g004140 | 69.136 | 81 | 24 | 1 | 193 | 272 | 33 | 113 | 2.04e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82775.t1 | AT5G47870 | 76.351 | 148 | 31 | 2 | 69 | 216 | 56 | 199 | 5.70e-79 | 239 |
| MS.gene82775.t1 | AT1G71310 | 50.382 | 131 | 61 | 2 | 88 | 217 | 47 | 174 | 3.66e-41 | 141 |
| MS.gene82775.t1 | AT1G71310 | 50.382 | 131 | 61 | 2 | 88 | 217 | 47 | 174 | 3.66e-41 | 141 |
| MS.gene82775.t1 | AT1G71310 | 44.318 | 88 | 45 | 2 | 88 | 174 | 47 | 131 | 2.32e-20 | 86.7 |
Find 59 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCATGGCCTGCCATAAT+TGG | 0.236494 | 6.1:-160282 | None:intergenic |
| GGAGGTTTAACGAGAGTATC+AGG | 0.259720 | 6.1:-154162 | None:intergenic |
| TTTGAATATCCGTCCAATTA+TGG | 0.262870 | 6.1:+160269 | MS.gene82775:CDS |
| TATCAGGGATTCGCTTATTA+AGG | 0.275884 | 6.1:-154146 | None:intergenic |
| GAAGAAGAAGCGGAGGAATT+AGG | 0.288624 | 6.1:-154192 | None:intergenic |
| TTGATAGGTATCATGCTAAT+AGG | 0.296623 | 6.1:+154495 | MS.gene82775:intron |
| TTCAAATTATGTTGTACCTT+TGG | 0.309936 | 6.1:+154056 | MS.gene82775:CDS |
| CAATTGAACCATCATCAATA+TGG | 0.328537 | 6.1:+153920 | MS.gene82775:CDS |
| CACTCACCTGATAGAGTTTG+AGG | 0.355426 | 6.1:-159648 | None:intergenic |
| AACATACCTCAAACTCTATC+AGG | 0.362270 | 6.1:+159642 | MS.gene82775:CDS |
| CTTCTTCCACCTTCATCCCC+TGG | 0.368735 | 6.1:+154208 | MS.gene82775:CDS |
| AGAGATGTTGAACACCTTCA+TGG | 0.386814 | 6.1:+160237 | MS.gene82775:CDS |
| GTCCTTTCTCTTATAATGCA+TGG | 0.392344 | 6.1:-160296 | None:intergenic |
| GCATGTGCGCGGTTTGGTCT+TGG | 0.393154 | 6.1:+158077 | MS.gene82775:CDS |
| GATTCTGCTTTCCTTGACTT+TGG | 0.395114 | 6.1:-159711 | None:intergenic |
| CTTGTAAACCATATTGATGA+TGG | 0.407031 | 6.1:-153928 | None:intergenic |
| GGAAAGAAAGGAGGAGGTGT+AGG | 0.419430 | 6.1:+154018 | MS.gene82775:CDS |
| CATAAGCGTTTGAAGAGAAC+CGG | 0.425743 | 6.1:-160191 | None:intergenic |
| TGTAAAGCATGTGCGCGGTT+TGG | 0.440363 | 6.1:+158071 | MS.gene82775:CDS |
| TGCTGAAACTGGATCACTAA+TGG | 0.460299 | 6.1:-158030 | None:intergenic |
| AAGAAAGGAGGAGGTGTAGG+AGG | 0.464745 | 6.1:+154021 | MS.gene82775:CDS |
| CAGGCCTATCGTGAGTCAAC+CGG | 0.466364 | 6.1:+157984 | MS.gene82775:intron |
| AGCAGCAGCAATAGCAGTGA+TGG | 0.477522 | 6.1:+153997 | MS.gene82775:CDS |
| CTTACTGTACGCGGATCTGA+TGG | 0.479382 | 6.1:+154674 | MS.gene82775:CDS |
| AATAGCAGTGATGGAAAGAA+AGG | 0.490604 | 6.1:+154006 | MS.gene82775:CDS |
| ACAAGAAAGACGAGAAGTAT+TGG | 0.497859 | 6.1:+153946 | MS.gene82775:CDS |
| TCTCTTCTTGCATGCAAACT+CGG | 0.502094 | 6.1:-160219 | None:intergenic |
| TCTCTAAGAATCTCAGCTAA+AGG | 0.509951 | 6.1:-154123 | None:intergenic |
| ATGTTAAGCTTCTATGCTCC+AGG | 0.515074 | 6.1:+154518 | MS.gene82775:CDS |
| GATGAAGGTGGAAGAAGAAG+CGG | 0.516992 | 6.1:-154202 | None:intergenic |
| AAGTACTGACCAGGGGATGA+AGG | 0.517778 | 6.1:-154217 | None:intergenic |
| AGTGATGGAAAGAAAGGAGG+AGG | 0.521198 | 6.1:+154012 | MS.gene82775:CDS |
| ATCAGTAGTTGATATTGTGC+CGG | 0.531881 | 6.1:-158003 | None:intergenic |
| AATATCCGTCCAATTATGGC+AGG | 0.544371 | 6.1:+160273 | MS.gene82775:CDS |
| TAATTGGACGGATATTCAAA+AGG | 0.547395 | 6.1:-160266 | None:intergenic |
| CTCAGCTAAAGGACGAGTAA+TGG | 0.549865 | 6.1:-154112 | None:intergenic |
| AGCGGAGGAATTAGGATCGG+TGG | 0.551381 | 6.1:-154184 | None:intergenic |
| TCAAAAGGTGTAAACCATGA+AGG | 0.561818 | 6.1:-160251 | None:intergenic |
| GAAGGTGGAAGAAGAAGCGG+AGG | 0.575926 | 6.1:-154199 | None:intergenic |
| CATGGCCTGCCATAATTGGA+CGG | 0.594937 | 6.1:-160278 | None:intergenic |
| TGATCCAGTTTCAGCAGCGG+AGG | 0.596606 | 6.1:+158037 | MS.gene82775:CDS |
| GCGGAGGAATTAGGATCGGT+GGG | 0.596981 | 6.1:-154183 | None:intergenic |
| GGCACAATATCAACTACTGA+TGG | 0.599190 | 6.1:+158005 | MS.gene82775:CDS |
| AGCTAAAGGACGAGTAATGG+TGG | 0.602256 | 6.1:-154109 | None:intergenic |
| CAACCAAAGACACCAAACCA+CGG | 0.607827 | 6.1:+160151 | MS.gene82775:intron |
| AGGAAAGCAGAATCATGCAC+AGG | 0.616667 | 6.1:+159720 | MS.gene82775:CDS |
| AAATACAGAAACCAAAGTCA+AGG | 0.616765 | 6.1:+159700 | MS.gene82775:CDS |
| TACTGACCAGGGGATGAAGG+TGG | 0.628798 | 6.1:-154214 | None:intergenic |
| GAGGTTTAACGAGAGTATCA+GGG | 0.629655 | 6.1:-154161 | None:intergenic |
| AATGAAAATGAATCATCCAA+AGG | 0.640887 | 6.1:-154072 | None:intergenic |
| TAGTGATCCAGTTTCAGCAG+CGG | 0.651588 | 6.1:+158034 | MS.gene82775:CDS |
| CAGATCCGCGTACAGTAAGA+CGG | 0.655531 | 6.1:-154670 | None:intergenic |
| AGAAGCGGAGGAATTAGGAT+CGG | 0.656165 | 6.1:-154187 | None:intergenic |
| AGCAGTGATGGAAAGAAAGG+AGG | 0.660145 | 6.1:+154009 | MS.gene82775:CDS |
| GAGGAATTAGGATCGGTGGG+AGG | 0.660294 | 6.1:-154180 | None:intergenic |
| TGTGCCGGTTGACTCACGAT+AGG | 0.667563 | 6.1:-157988 | None:intergenic |
| CTTTCTGTAAAGCATGTGCG+CGG | 0.675897 | 6.1:+158066 | MS.gene82775:CDS |
| TGTACGCGGATCTGATGGAG+AGG | 0.690894 | 6.1:+154679 | MS.gene82775:CDS |
| GTATACCGTCTTACTGTACG+CGG | 0.755443 | 6.1:+154665 | MS.gene82775:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTTATAAACATTATAT+AGG | + | chr6.1:155048-155067 | MS.gene82775:intron | 10.0% |
| !! | ATATAATGTTTATAAAGTTT+GGG | - | chr6.1:155048-155067 | None:intergenic | 10.0% |
| !! | ATATATATTCTTCAAATATT+TGG | - | chr6.1:157189-157208 | None:intergenic | 10.0% |
| !! | ATGAAATTTATATAAAAACT+GGG | + | chr6.1:157496-157515 | MS.gene82775:intron | 10.0% |
| !! | TAATTTAAATAAGATTGAAT+AGG | - | chr6.1:158948-158967 | None:intergenic | 10.0% |
| !! | TATATAATGTTTATAAAGTT+TGG | - | chr6.1:155049-155068 | None:intergenic | 10.0% |
| !! | TATGAAATTTATATAAAAAC+TGG | + | chr6.1:157495-157514 | MS.gene82775:intron | 10.0% |
| !!! | TTTTATTATTTTTTTGCTAT+TGG | - | chr6.1:156982-157001 | None:intergenic | 10.0% |
| !! | AAGAATTATAATAAAAAGGA+GGG | + | chr6.1:157384-157403 | MS.gene82775:intron | 15.0% |
| !! | ACATTGAATTGAATATAATT+TGG | + | chr6.1:157598-157617 | MS.gene82775:intron | 15.0% |
| !! | CAGATTTAAATGATAATAAT+GGG | - | chr6.1:154884-154903 | None:intergenic | 15.0% |
| !! | GAAATTATAGATGAATTAAA+GGG | + | chr6.1:157046-157065 | MS.gene82775:intron | 15.0% |
| !! | TAAAGTTTATATGCTTAATA+GGG | - | chr6.1:159304-159323 | None:intergenic | 15.0% |
| !! | TAAATTATAGCAAAAAGTTA+AGG | - | chr6.1:159871-159890 | None:intergenic | 15.0% |
| !! | TAAGAATTATAATAAAAAGG+AGG | + | chr6.1:157383-157402 | MS.gene82775:intron | 15.0% |
| !! | TCAGATTTAAATGATAATAA+TGG | - | chr6.1:154885-154904 | None:intergenic | 15.0% |
| !! | TCATTATTCAATCATAATAA+CGG | - | chr6.1:156079-156098 | None:intergenic | 15.0% |
| !! | TGAAATTATAGATGAATTAA+AGG | + | chr6.1:157045-157064 | MS.gene82775:intron | 15.0% |
| !! | TGAAATTTATATAAAAACTG+GGG | + | chr6.1:157497-157516 | MS.gene82775:intron | 15.0% |
| !! | TTAAAGTTTATATGCTTAAT+AGG | - | chr6.1:159305-159324 | None:intergenic | 15.0% |
| !! | TTAATTCATCTATAATTTCA+AGG | - | chr6.1:157045-157064 | None:intergenic | 15.0% |
| !!! | AAATATTTGTGAATTTGTTT+AGG | + | chr6.1:158451-158470 | MS.gene82775:intron | 15.0% |
| !!! | AAATTTTCTCAAATAGAATA+TGG | + | chr6.1:158538-158557 | MS.gene82775:intron | 15.0% |
| !!! | AATTTAGATAGTTTTGAATT+TGG | + | chr6.1:154571-154590 | MS.gene82775:intron | 15.0% |
| !!! | AGGAAGATTTTTTTAAAAAA+AGG | + | chr6.1:158582-158601 | MS.gene82775:intron | 15.0% |
| !!! | TTTTTTGATAATCAAGAATA+TGG | + | chr6.1:158513-158532 | MS.gene82775:intron | 15.0% |
| !! | AAACTGATATAAATAGAAGT+GGG | + | chr6.1:158171-158190 | MS.gene82775:intron | 20.0% |
| !! | AAATAAAAAAACTCTACCTT+AGG | + | chr6.1:158634-158653 | MS.gene82775:intron | 20.0% |
| !! | AAATTTATATAAAAACTGGG+GGG | + | chr6.1:157499-157518 | MS.gene82775:intron | 20.0% |
| !! | AACTTAAATCAATATTACTC+TGG | - | chr6.1:157742-157761 | None:intergenic | 20.0% |
| !! | AACTTTAAATGTATGAATGA+AGG | + | chr6.1:159317-159336 | MS.gene82775:intron | 20.0% |
| !! | AATAAAATGAAAAATGAACG+TGG | + | chr6.1:156995-157014 | MS.gene82775:intron | 20.0% |
| !! | AATAAGAAGAGAGAAAAATA+AGG | - | chr6.1:156130-156149 | None:intergenic | 20.0% |
| !! | AATACATAAATTAAGAGCTT+TGG | - | chr6.1:158490-158509 | None:intergenic | 20.0% |
| !! | ACTTTAAATGTATGAATGAA+GGG | + | chr6.1:159318-159337 | MS.gene82775:intron | 20.0% |
| !! | AGATCATATTAAATCTAACA+AGG | - | chr6.1:155563-155582 | None:intergenic | 20.0% |
| !! | ATCATATTAAATCTAACAAG+GGG | - | chr6.1:155561-155580 | None:intergenic | 20.0% |
| !! | ATTCATACAAAACAAAGATA+TGG | - | chr6.1:158248-158267 | None:intergenic | 20.0% |
| !! | CGCTAAGAATTATAATAAAA+AGG | + | chr6.1:157380-157399 | MS.gene82775:intron | 20.0% |
| !! | CTTTAAATCATAATGAGAAA+TGG | - | chr6.1:156244-156263 | None:intergenic | 20.0% |
| !! | CTTTAGCAATAAAATTTAGA+AGG | + | chr6.1:159171-159190 | MS.gene82775:intron | 20.0% |
| !! | GAAATTTATATAAAAACTGG+GGG | + | chr6.1:157498-157517 | MS.gene82775:intron | 20.0% |
| !! | GATCATATTAAATCTAACAA+GGG | - | chr6.1:155562-155581 | None:intergenic | 20.0% |
| !! | GGTTAAATTGTTATCATATA+CGG | + | chr6.1:158559-158578 | MS.gene82775:intron | 20.0% |
| !! | TAAACTGATATAAATAGAAG+TGG | + | chr6.1:158170-158189 | MS.gene82775:intron | 20.0% |
| !! | TATGTTAAATATACTTGCAT+TGG | + | chr6.1:155405-155424 | MS.gene82775:intron | 20.0% |
| !! | TATTAGATTCAATATGATCT+AGG | + | chr6.1:154911-154930 | MS.gene82775:intron | 20.0% |
| !! | TGTTAGATTTAATATGATCT+AGG | + | chr6.1:155563-155582 | MS.gene82775:intron | 20.0% |
| !! | TTACTAGCATATATAATTGT+TGG | - | chr6.1:155190-155209 | None:intergenic | 20.0% |
| !! | TTCAATGTAATAATGTTCAA+AGG | - | chr6.1:157586-157605 | None:intergenic | 20.0% |
| !!! | AAATTTTATTGCTAAAGCAT+TGG | - | chr6.1:159168-159187 | None:intergenic | 20.0% |
| !!! | AATAGAATATAATTTGCCAA+AGG | + | chr6.1:156283-156302 | MS.gene82775:intron | 20.0% |
| !!! | AATGTTTTTGATAAGATTAG+TGG | - | chr6.1:156367-156386 | None:intergenic | 20.0% |
| !!! | AATTTGGAATATGTTTTTGT+AGG | + | chr6.1:154587-154606 | MS.gene82775:intron | 20.0% |
| !!! | ACAAAGTTATTTTTCAAGAA+GGG | - | chr6.1:160128-160147 | None:intergenic | 20.0% |
| !!! | AGAAAGATAATGTTAATTTG+TGG | + | chr6.1:159348-159367 | MS.gene82775:intron | 20.0% |
| !!! | ATTTAAATGATAATAATGGG+TGG | - | chr6.1:154881-154900 | None:intergenic | 20.0% |
| !!! | ATTTGTACAACTATTTTGTT+GGG | + | chr6.1:156100-156119 | MS.gene82775:intron | 20.0% |
| !!! | TACCAAAATTCTAAGAATAA+TGG | - | chr6.1:154980-154999 | None:intergenic | 20.0% |
| !!! | TACTAGTACTTTTAAAGTTT+GGG | - | chr6.1:159106-159125 | None:intergenic | 20.0% |
| !!! | TATTTGTACAACTATTTTGT+TGG | + | chr6.1:156099-156118 | MS.gene82775:intron | 20.0% |
| !!! | TGAAAAAAATCTGAAACAAA+CGG | + | chr6.1:155534-155553 | MS.gene82775:intron | 20.0% |
| !!! | TTATTTTTCTCTCTTCTTAT+TGG | + | chr6.1:156129-156148 | MS.gene82775:intron | 20.0% |
| !!! | TTCATTTTCACATCAATTTA+AGG | - | chr6.1:158337-158356 | None:intergenic | 20.0% |
| !!! | TTGATAATTTAAGAGAGTTT+TGG | - | chr6.1:156860-156879 | None:intergenic | 20.0% |
| ! | AAAATACATTCTGTGCAAAT+TGG | + | chr6.1:155969-155988 | MS.gene82775:intron | 25.0% |
| ! | AAACATGATAGATTAGATGA+GGG | - | chr6.1:154711-154730 | None:intergenic | 25.0% |
| ! | AAATTTCAAATCAGAACGAT+GGG | - | chr6.1:155470-155489 | None:intergenic | 25.0% |
| ! | AACATTGATATCTAACGATT+AGG | - | chr6.1:158914-158933 | None:intergenic | 25.0% |
| ! | AAGATTGCTAGCATATATAA+TGG | - | chr6.1:155632-155651 | None:intergenic | 25.0% |
| ! | AATGAAAATGAATCATCCAA+AGG | - | chr6.1:154075-154094 | None:intergenic | 25.0% |
| ! | AATGGAATAGTAGAAAGTTA+GGG | - | chr6.1:155296-155315 | None:intergenic | 25.0% |
| ! | ACATTGATATCTAACGATTA+GGG | - | chr6.1:158913-158932 | None:intergenic | 25.0% |
| ! | AGTAGTCTTTATGGTAAAAA+GGG | - | chr6.1:158395-158414 | None:intergenic | 25.0% |
| ! | ATATAACTCCCAATTGAATT+TGG | - | chr6.1:159077-159096 | None:intergenic | 25.0% |
| ! | ATTATCAACTATGTAGATGT+TGG | + | chr6.1:155758-155777 | MS.gene82775:intron | 25.0% |
| ! | ATTCATCTCCAAATTCAATT+GGG | + | chr6.1:159066-159085 | MS.gene82775:intron | 25.0% |
| ! | CATGTGATTAAGTTCAATTA+TGG | + | chr6.1:154322-154341 | MS.gene82775:intron | 25.0% |
| ! | CATGTTAAATAAACTTGCAT+TGG | + | chr6.1:156572-156591 | MS.gene82775:intron | 25.0% |
| ! | CTTCTTGAAAAATAACTTTG+TGG | + | chr6.1:160127-160146 | MS.gene82775:intron | 25.0% |
| ! | GAATGCATTAGAAGTAAAAT+AGG | - | chr6.1:157078-157097 | None:intergenic | 25.0% |
| ! | TAAACATGATAGATTAGATG+AGG | - | chr6.1:154712-154731 | None:intergenic | 25.0% |
| ! | TAAATTGTTATCATATACGG+AGG | + | chr6.1:158562-158581 | MS.gene82775:intron | 25.0% |
| ! | TAGATTTAATATGATCTAGG+CGG | + | chr6.1:155566-155585 | MS.gene82775:intron | 25.0% |
| ! | TAGTAGTCTTTATGGTAAAA+AGG | - | chr6.1:158396-158415 | None:intergenic | 25.0% |
| ! | TCAAATTAAAATGGTGTCTT+GGG | - | chr6.1:160079-160098 | None:intergenic | 25.0% |
| ! | TTACTCTGGATTTAGATTTA+AGG | - | chr6.1:157728-157747 | None:intergenic | 25.0% |
| ! | TTCAAATTATGTTGTACCTT+TGG | + | chr6.1:154056-154075 | MS.gene82775:CDS | 25.0% |
| ! | TTCACAAAAAACAAAACCTA+AGG | - | chr6.1:158653-158672 | None:intergenic | 25.0% |
| ! | TTTCAAATAAAAAAAGGTCC+TGG | - | chr6.1:157313-157332 | None:intergenic | 25.0% |
| !! | ACAAAGAAAGTTAGTCATTT+TGG | - | chr6.1:157958-157977 | None:intergenic | 25.0% |
| !! | GAAAATGTCCAATATGATTT+TGG | + | chr6.1:157620-157639 | MS.gene82775:intron | 25.0% |
| !! | GATTTGAAATTTCTGTTCTT+GGG | + | chr6.1:155478-155497 | MS.gene82775:intron | 25.0% |
| !! | TGAAAAGTTCTGTGATTTTT+CGG | - | chr6.1:156465-156484 | None:intergenic | 25.0% |
| !! | TGACTCTGAATTTAGATTTT+GGG | - | chr6.1:155246-155265 | None:intergenic | 25.0% |
| !! | TGACTCTGATTTTAGATTAA+GGG | - | chr6.1:156792-156811 | None:intergenic | 25.0% |
| !! | TGATTTGAAATTTCTGTTCT+TGG | + | chr6.1:155477-155496 | MS.gene82775:intron | 25.0% |
| !! | TGCCATTATTCTTAGAATTT+TGG | + | chr6.1:154975-154994 | MS.gene82775:intron | 25.0% |
| !!! | AAGTTTGTTATGTCTGTTAT+TGG | + | chr6.1:155657-155676 | MS.gene82775:intron | 25.0% |
| !!! | AATGTGTTTTAGAAGCAAAA+AGG | - | chr6.1:154773-154792 | None:intergenic | 25.0% |
| !!! | AGTTGATAATTTGAGGTTTT+GGG | - | chr6.1:155748-155767 | None:intergenic | 25.0% |
| !!! | ATCTTGAATTTTTTTTTCGG+GGG | + | chr6.1:157161-157180 | MS.gene82775:intron | 25.0% |
| !!! | ATTTATTTTGAAGTTCCAAC+TGG | + | chr6.1:159972-159991 | MS.gene82775:intron | 25.0% |
| !!! | ATTTGCTTTTTGTAGTGTAA+AGG | + | chr6.1:158364-158383 | MS.gene82775:intron | 25.0% |
| !!! | CAAAGTTATTTTTCAAGAAG+GGG | - | chr6.1:160127-160146 | None:intergenic | 25.0% |
| !!! | CACAAAGTTATTTTTCAAGA+AGG | - | chr6.1:160129-160148 | None:intergenic | 25.0% |
| !!! | CGGATCTTGAATTTTTTTTT+CGG | + | chr6.1:157158-157177 | MS.gene82775:intron | 25.0% |
| !!! | GATCTTGAATTTTTTTTTCG+GGG | + | chr6.1:157160-157179 | MS.gene82775:intron | 25.0% |
| !!! | GATGTTATTTTCTCTGATAA+TGG | + | chr6.1:154629-154648 | MS.gene82775:CDS | 25.0% |
| !!! | GGATCTTGAATTTTTTTTTC+GGG | + | chr6.1:157159-157178 | MS.gene82775:intron | 25.0% |
| !!! | GTACTAGTACTTTTAAAGTT+TGG | - | chr6.1:159107-159126 | None:intergenic | 25.0% |
| !!! | TAGTTGATAATTTGAGGTTT+TGG | - | chr6.1:155749-155768 | None:intergenic | 25.0% |
| !!! | TCTACATAGTTGATAATTTG+AGG | - | chr6.1:155755-155774 | None:intergenic | 25.0% |
| !!! | TCTTGGGTGATTTTTTTTAA+GGG | + | chr6.1:155494-155513 | MS.gene82775:intron | 25.0% |
| !!! | TTCTTGGGTGATTTTTTTTA+AGG | + | chr6.1:155493-155512 | MS.gene82775:intron | 25.0% |
| !!! | TTTGCTTTTTGTAGTGTAAA+GGG | + | chr6.1:158365-158384 | MS.gene82775:intron | 25.0% |
| AAAAAACAGAAGAATAGAGG+TGG | - | chr6.1:155942-155961 | None:intergenic | 30.0% | |
| AAAGCCTACCAAAATCATAT+TGG | - | chr6.1:157631-157650 | None:intergenic | 30.0% | |
| AAATACAGAAACCAAAGTCA+AGG | + | chr6.1:159700-159719 | MS.gene82775:CDS | 30.0% | |
| AATGTGGTTCAGAAGAAAAA+AGG | - | chr6.1:155355-155374 | None:intergenic | 30.0% | |
| AGATTAGTGGCACATATAAA+AGG | - | chr6.1:156354-156373 | None:intergenic | 30.0% | |
| AGATTATTAGCGATTTCACA+CGG | - | chr6.1:155847-155866 | None:intergenic | 30.0% | |
| AGATTTAATATGATCTAGGC+GGG | + | chr6.1:155567-155586 | MS.gene82775:intron | 30.0% | |
| AGGTAGCAAATATGAATGAA+TGG | - | chr6.1:155314-155333 | None:intergenic | 30.0% | |
| ATAAAATTTAGAAGGCAAGG+AGG | + | chr6.1:159179-159198 | MS.gene82775:intron | 30.0% | |
| ATATTCAAAGTCCAATATGC+AGG | - | chr6.1:155379-155398 | None:intergenic | 30.0% | |
| ATCCACTTAGAATCAAACAT+AGG | - | chr6.1:156488-156507 | None:intergenic | 30.0% | |
| ATGCACTTAGAATCAAACAT+AGG | - | chr6.1:157819-157838 | None:intergenic | 30.0% | |
| ATTGCACTTTCTGAACTTAT+TGG | + | chr6.1:156023-156042 | MS.gene82775:intron | 30.0% | |
| CAAATTAAAATGGTGTCTTG+GGG | - | chr6.1:160078-160097 | None:intergenic | 30.0% | |
| CAATTGAACCATCATCAATA+TGG | + | chr6.1:153920-153939 | MS.gene82775:CDS | 30.0% | |
| CATGCTTTCAAATAAGCATT+TGG | - | chr6.1:158271-158290 | None:intergenic | 30.0% | |
| CATGTTAAATAAACTCGCAT+TGG | + | chr6.1:154823-154842 | MS.gene82775:intron | 30.0% | |
| CATTCATCTCCAAATTCAAT+TGG | + | chr6.1:159065-159084 | MS.gene82775:intron | 30.0% | |
| CCAAAACAATAGATAGAGAT+AGG | + | chr6.1:156153-156172 | MS.gene82775:intron | 30.0% | |
| CGATTAGTGGCATATATAAA+AGG | - | chr6.1:157675-157694 | None:intergenic | 30.0% | |
| CTCAAATTAAAATGGTGTCT+TGG | - | chr6.1:160080-160099 | None:intergenic | 30.0% | |
| CTTGTAAACCATATTGATGA+TGG | - | chr6.1:153931-153950 | None:intergenic | 30.0% | |
| CTTTCTGAACTTATTGGAAT+TGG | + | chr6.1:156029-156048 | MS.gene82775:intron | 30.0% | |
| GAAATTTCAAATCAGAACGA+TGG | - | chr6.1:155471-155490 | None:intergenic | 30.0% | |
| GAATGGAATAGTAGAAAGTT+AGG | - | chr6.1:155297-155316 | None:intergenic | 30.0% | |
| GACGATCTCTCAAATTAAAA+TGG | - | chr6.1:160088-160107 | None:intergenic | 30.0% | |
| GCAATAAAATTTAGAAGGCA+AGG | + | chr6.1:159176-159195 | MS.gene82775:intron | 30.0% | |
| GGAAAAAAACAGAAGAATAG+AGG | - | chr6.1:155945-155964 | None:intergenic | 30.0% | |
| GGTTAGTGGCATTATATAAA+TGG | - | chr6.1:156730-156749 | None:intergenic | 30.0% | |
| TAATTGGACGGATATTCAAA+AGG | - | chr6.1:160269-160288 | None:intergenic | 30.0% | |
| TAATTTCAAGAGTCGTACAT+CGG | + | chr6.1:158879-158898 | MS.gene82775:intron | 30.0% | |
| TAGATTCAATATGATCTAGG+TGG | + | chr6.1:154914-154933 | MS.gene82775:intron | 30.0% | |
| TATAAATAGAAGTGGGCAAA+AGG | + | chr6.1:158178-158197 | MS.gene82775:intron | 30.0% | |
| TCGAAAATAAGCCAATCAAA+GGG | - | chr6.1:154350-154369 | None:intergenic | 30.0% | |
| TGAATGCATTAGAAGTTAGA+AGG | - | chr6.1:155907-155926 | None:intergenic | 30.0% | |
| TGACTAACTTTCTTTGTTGA+TGG | + | chr6.1:157961-157980 | MS.gene82775:intron | 30.0% | |
| TGACTCCGAATTTAAATGTA+GGG | - | chr6.1:155684-155703 | None:intergenic | 30.0% | |
| TGACTCTGGATTTAAATTCA+GGG | - | chr6.1:156397-156416 | None:intergenic | 30.0% | |
| TTACCATAAAGACTACTACA+AGG | + | chr6.1:158398-158417 | MS.gene82775:intron | 30.0% | |
| TTATCTGCTTGTTCTTTGAT+AGG | + | chr6.1:154480-154499 | MS.gene82775:intron | 30.0% | |
| TTATGTAAAAGAGCTTGGTT+TGG | + | chr6.1:154372-154391 | MS.gene82775:intron | 30.0% | |
| TTGATAGGTATCATGCTAAT+AGG | + | chr6.1:154495-154514 | MS.gene82775:intron | 30.0% | |
| TTGGACCCTACATTTAAATT+CGG | + | chr6.1:155676-155695 | MS.gene82775:intron | 30.0% | |
| TTGGGATTAAATAGTGTAGA+TGG | - | chr6.1:155730-155749 | None:intergenic | 30.0% | |
| TTTGAATATCCGTCCAATTA+TGG | + | chr6.1:160269-160288 | MS.gene82775:CDS | 30.0% | |
| ! | ATAATAAAAAGGAGGGTGTA+GGG | + | chr6.1:157391-157410 | MS.gene82775:intron | 30.0% |
| ! | CAAACTTTTGATAAGGTTAG+TGG | - | chr6.1:156744-156763 | None:intergenic | 30.0% |
| ! | CACATGACAAACTTTTGATA+AGG | - | chr6.1:156751-156770 | None:intergenic | 30.0% |
| ! | CCTATCTCTATCTATTGTTT+TGG | - | chr6.1:156156-156175 | None:intergenic | 30.0% |
| ! | CTGACTCTGAATTTAGATTT+TGG | - | chr6.1:155247-155266 | None:intergenic | 30.0% |
| ! | CTGACTCTGATTTTAGATTA+AGG | - | chr6.1:156793-156812 | None:intergenic | 30.0% |
| ! | TATAATAAAAAGGAGGGTGT+AGG | + | chr6.1:157390-157409 | MS.gene82775:intron | 30.0% |
| ! | TGTGAATTTGTTTAGGTAGA+TGG | + | chr6.1:158458-158477 | MS.gene82775:intron | 30.0% |
| !! | AAGCTTTAAATCAGAATGAG+GGG | - | chr6.1:156634-156653 | None:intergenic | 30.0% |
| !! | AGAAGCTTTAAATCAGAATG+AGG | - | chr6.1:156636-156655 | None:intergenic | 30.0% |
| !! | ATGTCCAATATGATTTTGGT+AGG | + | chr6.1:157624-157643 | MS.gene82775:intron | 30.0% |
| !! | GAAGCTTTAAATCAGAATGA+GGG | - | chr6.1:156635-156654 | None:intergenic | 30.0% |
| !! | GACTTTGGTTTCTGTATTTT+AGG | - | chr6.1:159699-159718 | None:intergenic | 30.0% |
| !! | TGCACAGAATGTATTTTAGA+AGG | - | chr6.1:155966-155985 | None:intergenic | 30.0% |
| !! | TGCTTCTAAAACACATTATG+TGG | + | chr6.1:154776-154795 | MS.gene82775:intron | 30.0% |
| !! | TGGAATATGTTTTTGTAGGA+TGG | + | chr6.1:154591-154610 | MS.gene82775:intron | 30.0% |
| !! | TTGAAAGCATGTTACTCTTT+TGG | + | chr6.1:158280-158299 | MS.gene82775:intron | 30.0% |
| !! | TTTGGCTTGAATAGTGTAAA+AGG | - | chr6.1:157778-157797 | None:intergenic | 30.0% |
| AAAGCATGTGTGAAAGAATG+CGG | + | chr6.1:155820-155839 | MS.gene82775:intron | 35.0% | |
| AACATACCTCAAACTCTATC+AGG | + | chr6.1:159642-159661 | MS.gene82775:CDS | 35.0% | |
| AATAAAAAAAGGTCCTGGTG+TGG | - | chr6.1:157308-157327 | None:intergenic | 35.0% | |
| AATTTGCACAAAATGTGGTC+AGG | - | chr6.1:157561-157580 | None:intergenic | 35.0% | |
| ACACCTTGTAGTAGTCTTTA+TGG | - | chr6.1:158404-158423 | None:intergenic | 35.0% | |
| ACTAGTACGAAGTTTATCAC+TGG | + | chr6.1:159119-159138 | MS.gene82775:intron | 35.0% | |
| ACTCTGGTCAAGTAATGTTA+TGG | + | chr6.1:158211-158230 | MS.gene82775:intron | 35.0% | |
| ACTTACAAACCAGTTTGGTA+AGG | - | chr6.1:155016-155035 | None:intergenic | 35.0% | |
| ATAACTCAACCTTACCAAAC+TGG | + | chr6.1:155004-155023 | MS.gene82775:intron | 35.0% | |
| ATATCTGAGAACGAATGCAA+AGG | + | chr6.1:157868-157887 | MS.gene82775:intron | 35.0% | |
| ATGATAGATTAGATGAGGGT+AGG | - | chr6.1:154707-154726 | None:intergenic | 35.0% | |
| ATTTGCACAAAATGTGGTCA+GGG | - | chr6.1:157560-157579 | None:intergenic | 35.0% | |
| CAACTAGATAGACATCATAG+AGG | + | chr6.1:159995-160014 | MS.gene82775:intron | 35.0% | |
| CACCTATGTTTGATTCTAAG+TGG | + | chr6.1:156483-156502 | MS.gene82775:intron | 35.0% | |
| CAGAACAACAACAATAGAGA+TGG | - | chr6.1:154749-154768 | None:intergenic | 35.0% | |
| CTATTCAAGCCAAAAATCCA+CGG | + | chr6.1:157784-157803 | MS.gene82775:intron | 35.0% | |
| CTCGAAAATAAGCCAATCAA+AGG | - | chr6.1:154351-154370 | None:intergenic | 35.0% | |
| CTGAATTTAAATCCAGAGTC+AGG | + | chr6.1:156396-156415 | MS.gene82775:intron | 35.0% | |
| CTGACTCCGAATTTAAATGT+AGG | - | chr6.1:155685-155704 | None:intergenic | 35.0% | |
| CTGACTCTGGATTTAAATTC+AGG | - | chr6.1:156398-156417 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGTGAA+TGG | - | chr6.1:153877-153896 | None:intergenic | 35.0% | |
| GAATGTGGTTAGAGAGAAAA+AGG | - | chr6.1:157133-157152 | None:intergenic | 35.0% | |
| GATTATTAGCGATTTCACAC+GGG | - | chr6.1:155846-155865 | None:intergenic | 35.0% | |
| GCTTCTGAGTGATATTGTAT+CGG | + | chr6.1:154946-154965 | MS.gene82775:intron | 35.0% | |
| GGTTTATGCTACTCTAACTT+TGG | - | chr6.1:158316-158335 | None:intergenic | 35.0% | |
| TACAACGTTGTTAACTGTTG+TGG | + | chr6.1:157228-157247 | MS.gene82775:intron | 35.0% | |
| TATCAGGGATTCGCTTATTA+AGG | - | chr6.1:154149-154168 | None:intergenic | 35.0% | |
| TCAAGTTTATTGCCACACTA+TGG | + | chr6.1:159372-159391 | MS.gene82775:intron | 35.0% | |
| TCTGAACTTATTGGAATTGG+AGG | + | chr6.1:156032-156051 | MS.gene82775:intron | 35.0% | |
| TTAGAGAGAAAAAGGACAGA+AGG | - | chr6.1:157125-157144 | None:intergenic | 35.0% | |
| TTGGAGATGAATGATTCGAT+AGG | - | chr6.1:159058-159077 | None:intergenic | 35.0% | |
| TTTGAAAACCTCCAACATGT+AGG | - | chr6.1:159413-159432 | None:intergenic | 35.0% | |
| ! | AATAGCAGTGATGGAAAGAA+AGG | + | chr6.1:154006-154025 | MS.gene82775:CDS | 35.0% |
| ! | ACAAGAAAGACGAGAAGTAT+TGG | + | chr6.1:153946-153965 | MS.gene82775:CDS | 35.0% |
| ! | AGGCTAATTTGCACAAAATG+TGG | - | chr6.1:157566-157585 | None:intergenic | 35.0% |
| ! | ATCAGTAGTTGATATTGTGC+CGG | - | chr6.1:158006-158025 | None:intergenic | 35.0% |
| ! | GTTTTCAAAGTGAGAGGAAT+TGG | + | chr6.1:159424-159443 | MS.gene82775:intron | 35.0% |
| ! | TAATTTGCCAAAGGCTCAAA+AGG | + | chr6.1:156292-156311 | MS.gene82775:intron | 35.0% |
| ! | TCAAAAGGTGTAAACCATGA+AGG | - | chr6.1:160254-160273 | None:intergenic | 35.0% |
| ! | TCTCTAAGAATCTCAGCTAA+AGG | - | chr6.1:154126-154145 | None:intergenic | 35.0% |
| ! | TGATAAGTTCCGTGGATTTT+TGG | - | chr6.1:157796-157815 | None:intergenic | 35.0% |
| !! | AATGAAGAAAGTACTGACCA+GGG | - | chr6.1:154228-154247 | None:intergenic | 35.0% |
| !! | CAAACTGGTTTGTAAGTTGA+GGG | + | chr6.1:155019-155038 | MS.gene82775:intron | 35.0% |
| !! | TAACTTTCTTTGTTGATGGC+AGG | + | chr6.1:157965-157984 | MS.gene82775:intron | 35.0% |
| !! | TAATGAAGAAAGTACTGACC+AGG | - | chr6.1:154229-154248 | None:intergenic | 35.0% |
| !! | TATGTTTTTGTAGGATGGTG+TGG | + | chr6.1:154596-154615 | MS.gene82775:intron | 35.0% |
| !! | TGTAAAGTGGTGGATTTAGT+TGG | - | chr6.1:155074-155093 | None:intergenic | 35.0% |
| !!! | CTTTGATTGGCTTATTTTCG+AGG | + | chr6.1:154349-154368 | MS.gene82775:intron | 35.0% |
| !!! | TATTTTTCAAGAAGGGGTTG+CGG | - | chr6.1:160121-160140 | None:intergenic | 35.0% |
| !!! | TTTTTTTGCTATTGGCCTAG+TGG | - | chr6.1:156974-156993 | None:intergenic | 35.0% |
| AAACCTCCAACATGTAGGAA+TGG | - | chr6.1:159408-159427 | None:intergenic | 40.0% | |
| AAAGGACAGAAGGAGAATAG+AGG | - | chr6.1:157115-157134 | None:intergenic | 40.0% | |
| AAATAGAAGTGGGCAAAAGG+CGG | + | chr6.1:158181-158200 | MS.gene82775:intron | 40.0% | |
| AACATAGGTGATAAGTTCCG+TGG | - | chr6.1:157804-157823 | None:intergenic | 40.0% | |
| AACGTTGTTAACTGTTGTGG+TGG | + | chr6.1:157231-157250 | MS.gene82775:intron | 40.0% | |
| AATATCCGTCCAATTATGGC+AGG | + | chr6.1:160273-160292 | MS.gene82775:CDS | 40.0% | |
| ACAGTCACAGATTGTTGAAG+TGG | + | chr6.1:159268-159287 | MS.gene82775:intron | 40.0% | |
| ACTACACTACAACAACACGA+GGG | - | chr6.1:156895-156914 | None:intergenic | 40.0% | |
| AGAGATGTTGAACACCTTCA+TGG | + | chr6.1:160237-160256 | MS.gene82775:CDS | 40.0% | |
| AGTCCAATATGCAGGTAATG+TGG | - | chr6.1:155371-155390 | None:intergenic | 40.0% | |
| AGTGGTCCTATGATGTTAAG+AGG | - | chr6.1:159798-159817 | None:intergenic | 40.0% | |
| ATGTCTATCTAGTTGCCAGT+TGG | - | chr6.1:159990-160009 | None:intergenic | 40.0% | |
| ATGTTAAGCTTCTATGCTCC+AGG | + | chr6.1:154518-154537 | MS.gene82775:CDS | 40.0% | |
| CAATTATGGCTCCCTTTGAT+TGG | + | chr6.1:154336-154355 | MS.gene82775:intron | 40.0% | |
| CATAAGCGTTTGAAGAGAAC+CGG | - | chr6.1:160194-160213 | None:intergenic | 40.0% | |
| CCTCAACTTACAAACCAGTT+TGG | - | chr6.1:155021-155040 | None:intergenic | 40.0% | |
| CGAGGTTATGTAAAAGAGCT+TGG | + | chr6.1:154367-154386 | MS.gene82775:intron | 40.0% | |
| CTGCCTTCTAACACTATTCA+AGG | + | chr6.1:156834-156853 | MS.gene82775:intron | 40.0% | |
| GAACCACATTACCTGCATAT+TGG | + | chr6.1:155365-155384 | MS.gene82775:intron | 40.0% | |
| GACTAAAATCAACCTGACTC+TGG | - | chr6.1:156411-156430 | None:intergenic | 40.0% | |
| GATTCTGCTTTCCTTGACTT+TGG | - | chr6.1:159714-159733 | None:intergenic | 40.0% | |
| GGAGAGAACAACAACAATAG+AGG | - | chr6.1:155334-155353 | None:intergenic | 40.0% | |
| GGCACAATATCAACTACTGA+TGG | + | chr6.1:158005-158024 | MS.gene82775:CDS | 40.0% | |
| GTCGATCAGAAATGTCATGT+CGG | - | chr6.1:154282-154301 | None:intergenic | 40.0% | |
| GTGGTCCTATGATGTTAAGA+GGG | - | chr6.1:159797-159816 | None:intergenic | 40.0% | |
| TCTCTTCTTGCATGCAAACT+CGG | - | chr6.1:160222-160241 | None:intergenic | 40.0% | |
| TGCTGAAACTGGATCACTAA+TGG | - | chr6.1:158033-158052 | None:intergenic | 40.0% | |
| TTAAAATGGTGTCTTGGGGA+TGG | - | chr6.1:160074-160093 | None:intergenic | 40.0% | |
| TTCTCTCTAACCACATTCAG+TGG | + | chr6.1:157135-157154 | MS.gene82775:intron | 40.0% | |
| TTTGCACAAAATGTGGTCAG+GGG | - | chr6.1:157559-157578 | None:intergenic | 40.0% | |
| ! | CCTTGTTTGAAAACAACGAG+TGG | - | chr6.1:159816-159835 | None:intergenic | 40.0% |
| ! | GTTTTCGATCTCGTCATTAC+TGG | + | chr6.1:159835-159854 | MS.gene82775:intron | 40.0% |
| ! | TGGCCTTGAATAGTGTTAGA+AGG | - | chr6.1:156840-156859 | None:intergenic | 40.0% |
| ! | TTGGAGGTTTTCAAAGTGAG+AGG | + | chr6.1:159418-159437 | MS.gene82775:intron | 40.0% |
| !! | ATGAAGAAAGTACTGACCAG+GGG | - | chr6.1:154227-154246 | None:intergenic | 40.0% |
| !! | CCAAACTGGTTTGTAAGTTG+AGG | + | chr6.1:155018-155037 | MS.gene82775:intron | 40.0% |
| !! | CCACTCGTTGTTTTCAAACA+AGG | + | chr6.1:159813-159832 | MS.gene82775:intron | 40.0% |
| !! | CTTGCATTGGCTCAACTTAT+TGG | + | chr6.1:156585-156604 | MS.gene82775:intron | 40.0% |
| !! | GAGGTTTAACGAGAGTATCA+GGG | - | chr6.1:154164-154183 | None:intergenic | 40.0% |
| !! | GTAGAGTACCAGTGATTTTG+CGG | - | chr6.1:157021-157040 | None:intergenic | 40.0% |
| !!! | AGAGAACCGGCTTTCTTTTT+TGG | - | chr6.1:160181-160200 | None:intergenic | 40.0% |
| !!! | GAGAACCGGCTTTCTTTTTT+GGG | - | chr6.1:160180-160199 | None:intergenic | 40.0% |
| AACATGTAGGAATGGCATGG+AGG | - | chr6.1:159400-159419 | None:intergenic | 45.0% | |
| AAGGCTCAAAAGGATCTAGG+TGG | + | chr6.1:156302-156321 | MS.gene82775:intron | 45.0% | |
| AATGCATGGCCTGCCATAAT+TGG | - | chr6.1:160285-160304 | None:intergenic | 45.0% | |
| AGAAGCGGAGGAATTAGGAT+CGG | - | chr6.1:154190-154209 | None:intergenic | 45.0% | |
| AGCTAAAGGACGAGTAATGG+TGG | - | chr6.1:154112-154131 | None:intergenic | 45.0% | |
| AGGAAAGCAGAATCATGCAC+AGG | + | chr6.1:159720-159739 | MS.gene82775:CDS | 45.0% | |
| AGGCTCAAAAGGATCTAGGT+GGG | + | chr6.1:156303-156322 | MS.gene82775:intron | 45.0% | |
| ATGCCATTCCTACATGTTGG+AGG | + | chr6.1:159402-159421 | MS.gene82775:intron | 45.0% | |
| CAACCAAAGACACCAAACCA+CGG | + | chr6.1:160151-160170 | MS.gene82775:intron | 45.0% | |
| CAAGCTTCTGACACGATTAG+TGG | - | chr6.1:157688-157707 | None:intergenic | 45.0% | |
| CACTACACTACAACAACACG+AGG | - | chr6.1:156896-156915 | None:intergenic | 45.0% | |
| CACTACTAGGACTTGAGTGT+CGG | + | chr6.1:156921-156940 | MS.gene82775:intron | 45.0% | |
| CACTCACCTGATAGAGTTTG+AGG | - | chr6.1:159651-159670 | None:intergenic | 45.0% | |
| CCAAAGGCTCAAAAGGATCT+AGG | + | chr6.1:156299-156318 | MS.gene82775:intron | 45.0% | |
| CTCAGCTAAAGGACGAGTAA+TGG | - | chr6.1:154115-154134 | None:intergenic | 45.0% | |
| CTTTACACCCAGCACAATGA+AGG | + | chr6.1:155087-155106 | MS.gene82775:intron | 45.0% | |
| CTTTCTGTAAAGCATGTGCG+CGG | + | chr6.1:158066-158085 | MS.gene82775:CDS | 45.0% | |
| GAAGAAGAAGCGGAGGAATT+AGG | - | chr6.1:154195-154214 | None:intergenic | 45.0% | |
| GAAGGCCCTCTTAACATCAT+AGG | + | chr6.1:159789-159808 | MS.gene82775:intron | 45.0% | |
| GACATTACTCTCACTCTGCA+GGG | - | chr6.1:159502-159521 | None:intergenic | 45.0% | |
| GATGAAGGTGGAAGAAGAAG+CGG | - | chr6.1:154205-154224 | None:intergenic | 45.0% | |
| GATTGTTGAAGTGGTGGTTG+TGG | + | chr6.1:159277-159296 | MS.gene82775:intron | 45.0% | |
| GTATACCGTCTTACTGTACG+CGG | + | chr6.1:154665-154684 | MS.gene82775:CDS | 45.0% | |
| GTCACAGATTGTTGAAGTGG+TGG | + | chr6.1:159271-159290 | MS.gene82775:intron | 45.0% | |
| GTGTAGTGGTTACCACTACT+AGG | + | chr6.1:156908-156927 | MS.gene82775:intron | 45.0% | |
| TACCACAGCAGTTGTGAGAA+AGG | - | chr6.1:159562-159581 | None:intergenic | 45.0% | |
| TACCTTTCTCACAACTGCTG+TGG | + | chr6.1:159557-159576 | MS.gene82775:intron | 45.0% | |
| TAGTGATCCAGTTTCAGCAG+CGG | + | chr6.1:158034-158053 | MS.gene82775:CDS | 45.0% | |
| TCATTGTGCTGGGTGTAAAG+TGG | - | chr6.1:155087-155106 | None:intergenic | 45.0% | |
| TCCAACACCTTCATTGTGCT+GGG | - | chr6.1:155097-155116 | None:intergenic | 45.0% | |
| TCCAACATGTAGGAATGGCA+TGG | - | chr6.1:159403-159422 | None:intergenic | 45.0% | |
| TCCATGCCATTCCTACATGT+TGG | + | chr6.1:159399-159418 | MS.gene82775:intron | 45.0% | |
| TCTCTAACCACATTCAGTGG+CGG | + | chr6.1:157138-157157 | MS.gene82775:intron | 45.0% | |
| TGACATTACTCTCACTCTGC+AGG | - | chr6.1:159503-159522 | None:intergenic | 45.0% | |
| TGGAAATTCCGCCTTCATTG+CGG | - | chr6.1:155170-155189 | None:intergenic | 45.0% | |
| ! | AGCAGTGATGGAAAGAAAGG+AGG | + | chr6.1:154009-154028 | MS.gene82775:CDS | 45.0% |
| ! | AGTGATGGAAAGAAAGGAGG+AGG | + | chr6.1:154012-154031 | MS.gene82775:CDS | 45.0% |
| ! | CCTAGATCCTTTTGAGCCTT+TGG | - | chr6.1:156302-156321 | None:intergenic | 45.0% |
| ! | CTCGTGTTGTTGTAGTGTAG+TGG | + | chr6.1:156894-156913 | MS.gene82775:intron | 45.0% |
| ! | TGTGTCACTACTTGCATCAG+AGG | + | chr6.1:159747-159766 | MS.gene82775:intron | 45.0% |
| ! | TTCGGCTTGAGTAGTGTAGA+AGG | - | chr6.1:156447-156466 | None:intergenic | 45.0% |
| !! | GGAGGTTTAACGAGAGTATC+AGG | - | chr6.1:154165-154184 | None:intergenic | 45.0% |
| !! | TACATCGCTTGTTTGGTGCT+CGG | + | chr6.1:157267-157286 | MS.gene82775:intron | 45.0% |
| !!! | AACCGGCTTTCTTTTTTGGG+TGG | - | chr6.1:160177-160196 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTCAAATAAAAAA+AGG | - | chr6.1:157319-157338 | None:intergenic | 5.0% |
| ACCCAAATGCCACAGTTAGG+CGG | + | chr6.1:155133-155152 | MS.gene82775:intron | 50.0% | |
| ACTGTTGTGGTGGTACATCG+TGG | + | chr6.1:157241-157260 | MS.gene82775:intron | 50.0% | |
| ACTTGCATCAGAGGTGGTGA+TGG | + | chr6.1:159756-159775 | MS.gene82775:intron | 50.0% | |
| AGCAGCAGCAATAGCAGTGA+TGG | + | chr6.1:153997-154016 | MS.gene82775:CDS | 50.0% | |
| ATGTTAAGAGGGCCTTCACC+AGG | - | chr6.1:159786-159805 | None:intergenic | 50.0% | |
| CAGATCCGCGTACAGTAAGA+CGG | - | chr6.1:154673-154692 | None:intergenic | 50.0% | |
| CATGGCCTGCCATAATTGGA+CGG | - | chr6.1:160281-160300 | None:intergenic | 50.0% | |
| CGACACTCAAGTCCTAGTAG+TGG | - | chr6.1:156923-156942 | None:intergenic | 50.0% | |
| CTCCAACACCTTCATTGTGC+TGG | - | chr6.1:155098-155117 | None:intergenic | 50.0% | |
| CTTACTGTACGCGGATCTGA+TGG | + | chr6.1:154674-154693 | MS.gene82775:CDS | 50.0% | |
| GCAACCCAAATGCCACAGTT+AGG | + | chr6.1:155130-155149 | MS.gene82775:intron | 50.0% | |
| GCAATTTGCAAACACGCACC+TGG | - | chr6.1:154539-154558 | None:intergenic | 50.0% | |
| GGACAGAAGGAGAATAGAGG+TGG | - | chr6.1:157112-157131 | None:intergenic | 50.0% | |
| GGCCACCCAAAAAAGAAAGC+CGG | + | chr6.1:160172-160191 | MS.gene82775:CDS | 50.0% | |
| GTCACTACTTGCATCAGAGG+TGG | + | chr6.1:159750-159769 | MS.gene82775:intron | 50.0% | |
| GTGGTGGTACATCGCTTGTT+TGG | + | chr6.1:157260-157279 | MS.gene82775:intron | 50.0% | |
| TCAAGATCCGCCACTGAATG+TGG | - | chr6.1:157148-157167 | None:intergenic | 50.0% | |
| TGTAAAGCATGTGCGCGGTT+TGG | + | chr6.1:158071-158090 | MS.gene82775:CDS | 50.0% | |
| TTGGCTCAACTCATTGGTGG+AGG | + | chr6.1:154842-154861 | MS.gene82775:intron | 50.0% | |
| TTGTGCTGGGTGTAAAGTGG+TGG | - | chr6.1:155084-155103 | None:intergenic | 50.0% | |
| ! | AAGAAAGGAGGAGGTGTAGG+AGG | + | chr6.1:154021-154040 | MS.gene82775:CDS | 50.0% |
| ! | ACCCAGCACAATGAAGGTGT+TGG | + | chr6.1:155093-155112 | MS.gene82775:intron | 50.0% |
| ! | ATAAAAACTGGGGGGTGCAG+TGG | + | chr6.1:157507-157526 | MS.gene82775:intron | 50.0% |
| ! | GGAAAGAAAGGAGGAGGTGT+AGG | + | chr6.1:154018-154037 | MS.gene82775:CDS | 50.0% |
| ! | GTGTCTTGGGGATGGTTTGT+TGG | - | chr6.1:160066-160085 | None:intergenic | 50.0% |
| ! | GTTTGTTGGTGAAGGCTGGT+AGG | - | chr6.1:160052-160071 | None:intergenic | 50.0% |
| ! | TTGCTATTGGCCTAGTGGCA+GGG | - | chr6.1:156969-156988 | None:intergenic | 50.0% |
| ! | TTTTCCTCCGCTGCTGAAAC+TGG | - | chr6.1:158044-158063 | None:intergenic | 50.0% |
| !! | AAGTACTGACCAGGGGATGA+AGG | - | chr6.1:154220-154239 | None:intergenic | 50.0% |
| !! | ACATCGCTTGTTTGGTGCTC+GGG | + | chr6.1:157268-157287 | MS.gene82775:intron | 50.0% |
| !! | CAGCACAATGAAGGTGTTGG+AGG | + | chr6.1:155096-155115 | MS.gene82775:intron | 50.0% |
| !! | CGTGGTTTGGTGTCTTTGGT+TGG | - | chr6.1:160153-160172 | None:intergenic | 50.0% |
| !! | CTCGCATTGGCTCAACTCAT+TGG | + | chr6.1:154836-154855 | MS.gene82775:intron | 50.0% |
| !! | GATGGTTTGTTGGTGAAGGC+TGG | - | chr6.1:160056-160075 | None:intergenic | 50.0% |
| !! | GCATTGGCTCAACTCATTGG+TGG | + | chr6.1:154839-154858 | MS.gene82775:intron | 50.0% |
| !! | TGGGGATGGTTTGTTGGTGA+AGG | - | chr6.1:160060-160079 | None:intergenic | 50.0% |
| !! | TTTGCTATTGGCCTAGTGGC+AGG | - | chr6.1:156970-156989 | None:intergenic | 50.0% |
| !!! | CTTTCTTTTTTGGGTGGCCG+TGG | - | chr6.1:160171-160190 | None:intergenic | 50.0% |
| !!! | TTTTTTGGGTGGCCGTGGTT+TGG | - | chr6.1:160166-160185 | None:intergenic | 50.0% |
| AAAAGGCGGCGGTTAGACTC+TGG | + | chr6.1:158195-158214 | MS.gene82775:intron | 55.0% | |
| AATGCCACAGTTAGGCGGCT+AGG | + | chr6.1:155138-155157 | MS.gene82775:intron | 55.0% | |
| AGCCGCCTAACTGTGGCATT+TGG | - | chr6.1:155138-155157 | None:intergenic | 55.0% | |
| AGCGGAGGAATTAGGATCGG+TGG | - | chr6.1:154187-154206 | None:intergenic | 55.0% | |
| ATGCCACAGTTAGGCGGCTA+GGG | + | chr6.1:155139-155158 | MS.gene82775:intron | 55.0% | |
| CAGGCCTATCGTGAGTCAAC+CGG | + | chr6.1:157984-158003 | MS.gene82775:intron | 55.0% | |
| CTGATACGTTGTCGCTGCAG+TGG | - | chr6.1:157457-157476 | None:intergenic | 55.0% | |
| CTTCTTCCACCTTCATCCCC+TGG | + | chr6.1:154208-154227 | MS.gene82775:CDS | 55.0% | |
| GAACGTGGCCGCAAAATCAC+TGG | + | chr6.1:157010-157029 | MS.gene82775:intron | 55.0% | |
| GAAGGTGGAAGAAGAAGCGG+AGG | - | chr6.1:154202-154221 | None:intergenic | 55.0% | |
| GAGGAATTAGGATCGGTGGG+AGG | - | chr6.1:154183-154202 | None:intergenic | 55.0% | |
| GCACAAAATGTGGTCAGGGG+CGG | - | chr6.1:157556-157575 | None:intergenic | 55.0% | |
| GCCGCCTAACTGTGGCATTT+GGG | - | chr6.1:155137-155156 | None:intergenic | 55.0% | |
| GCGGAGGAATTAGGATCGGT+GGG | - | chr6.1:154186-154205 | None:intergenic | 55.0% | |
| GGCATGGAGGATCCATAGTG+TGG | - | chr6.1:159387-159406 | None:intergenic | 55.0% | |
| GTTGTGGTGGTACATCGTGG+TGG | + | chr6.1:157244-157263 | MS.gene82775:intron | 55.0% | |
| TACTGACCAGGGGATGAAGG+TGG | - | chr6.1:154217-154236 | None:intergenic | 55.0% | |
| TAGAAGTGGGCAAAAGGCGG+CGG | + | chr6.1:158184-158203 | MS.gene82775:intron | 55.0% | |
| TGATCCAGTTTCAGCAGCGG+AGG | + | chr6.1:158037-158056 | MS.gene82775:CDS | 55.0% | |
| TGTACGCGGATCTGATGGAG+AGG | + | chr6.1:154679-154698 | MS.gene82775:CDS | 55.0% | |
| TTGGCTCAACTTGTCGCTGG+AGG | + | chr6.1:155424-155443 | MS.gene82775:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | + | chr6.1:155108-155127 | MS.gene82775:intron | 55.0% |
| ! | TGCTATTGGCCTAGTGGCAG+GGG | - | chr6.1:156968-156987 | None:intergenic | 55.0% |
| !! | ATGCTGGTTCGAACCACACC+AGG | + | chr6.1:157292-157311 | MS.gene82775:intron | 55.0% |
| !! | CATCGCTTGTTTGGTGCTCG+GGG | + | chr6.1:157269-157288 | MS.gene82775:intron | 55.0% |
| !! | GCATTGGCTCAACTTGTCGC+TGG | + | chr6.1:155421-155440 | MS.gene82775:intron | 55.0% |
| !! | TGAGTGTCGGTTCGAACCCA+CGG | + | chr6.1:156934-156953 | MS.gene82775:intron | 55.0% |
| !! | TGGCCGTGGTTTGGTGTCTT+TGG | - | chr6.1:160157-160176 | None:intergenic | 55.0% |
| !! | TGTGCCGGTTGACTCACGAT+AGG | - | chr6.1:157991-158010 | None:intergenic | 55.0% |
| ACAGTTAGGCGGCTAGGGAC+GGG | + | chr6.1:155144-155163 | MS.gene82775:intron | 60.0% | |
| CACAGTTAGGCGGCTAGGGA+CGG | + | chr6.1:155143-155162 | MS.gene82775:intron | 60.0% | |
| TGGTCAGGGGCGGATCTCTT+TGG | - | chr6.1:157546-157565 | None:intergenic | 60.0% | |
| TTGTCGCTGCAGTGGTCGTG+TGG | - | chr6.1:157449-157468 | None:intergenic | 60.0% | |
| ! | GCTATTGGCCTAGTGGCAGG+GGG | - | chr6.1:156967-156986 | None:intergenic | 60.0% |
| ! | GGATCTCTTTGGAGACCCCC+AGG | - | chr6.1:157535-157554 | None:intergenic | 60.0% |
| ! | GGTGATGGCTCTCCTGGTGA+AGG | + | chr6.1:159771-159790 | MS.gene82775:intron | 60.0% |
| !! | AGAGGTGGTGATGGCTCTCC+TGG | + | chr6.1:159765-159784 | MS.gene82775:intron | 60.0% |
| !! | GCATGTGCGCGGTTTGGTCT+TGG | + | chr6.1:158077-158096 | MS.gene82775:CDS | 60.0% |
| !! | TGTTTGGTGCTCGGGGATGC+TGG | + | chr6.1:157276-157295 | MS.gene82775:intron | 60.0% |
| CGTCCCTAGCCGCCTAACTG+TGG | - | chr6.1:155145-155164 | None:intergenic | 65.0% | |
| CTAGGGACGGGCCGCAATGA+AGG | + | chr6.1:155156-155175 | MS.gene82775:intron | 65.0% | |
| TTGGCCTAGTGGCAGGGGGT+GGG | - | chr6.1:156963-156982 | None:intergenic | 65.0% | |
| ! | ATTGGCCTAGTGGCAGGGGG+TGG | - | chr6.1:156964-156983 | None:intergenic | 65.0% |
| GGGACGGGCCGCAATGAAGG+CGG | + | chr6.1:155159-155178 | MS.gene82775:intron | 70.0% | |
| TGGCCTAGTGGCAGGGGGTG+GGG | - | chr6.1:156962-156981 | None:intergenic | 70.0% | |
| ! | TGGGGGGTGCAGTGGCACCT+GGG | + | chr6.1:157515-157534 | MS.gene82775:intron | 70.0% |
| GCACCCCACCCCCTGCCACT+AGG | + | chr6.1:156956-156975 | MS.gene82775:intron | 75.0% | |
| ! | CTGGGGGGTGCAGTGGCACC+TGG | + | chr6.1:157514-157533 | MS.gene82775:intron | 75.0% |
| ! | GGGGGGTGCAGTGGCACCTG+GGG | + | chr6.1:157516-157535 | MS.gene82775:intron | 75.0% |
| ! | GGGGGTGCAGTGGCACCTGG+GGG | + | chr6.1:157517-157536 | MS.gene82775:intron | 75.0% |
| !!! | GGCAGGGGGTGGGGTGCCGT+GGG | - | chr6.1:156953-156972 | None:intergenic | 80.0% |
| !!! | TGGCAGGGGGTGGGGTGCCG+TGG | - | chr6.1:156954-156973 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 153844 | 160308 | 153844 | ID=MS.gene82775 |
| chr6.1 | mRNA | 153844 | 160308 | 153844 | ID=MS.gene82775.t1;Parent=MS.gene82775 |
| chr6.1 | exon | 153844 | 154229 | 153844 | ID=MS.gene82775.t1.exon1;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 153844 | 154229 | 153844 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| chr6.1 | exon | 154502 | 154539 | 154502 | ID=MS.gene82775.t1.exon2;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 154502 | 154539 | 154502 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| chr6.1 | exon | 154609 | 154700 | 154609 | ID=MS.gene82775.t1.exon3;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 154609 | 154700 | 154609 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| chr6.1 | exon | 157987 | 158131 | 157987 | ID=MS.gene82775.t1.exon4;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 157987 | 158131 | 157987 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| chr6.1 | exon | 159586 | 159741 | 159586 | ID=MS.gene82775.t1.exon5;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 159586 | 159741 | 159586 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| chr6.1 | exon | 160160 | 160308 | 160160 | ID=MS.gene82775.t1.exon6;Parent=MS.gene82775.t1 |
| chr6.1 | CDS | 160160 | 160308 | 160160 | ID=cds.MS.gene82775.t1;Parent=MS.gene82775.t1 |
| Gene Sequence |
| Protein sequence |
