Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82850.t1 | XP_003618155.1 | 97 | 504 | 15 | 0 | 1 | 504 | 1 | 504 | 2.90E-286 | 993.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82850.t1 | Q5ZJW8 | 36.5 | 370 | 198 | 7 | 48 | 396 | 43 | 396 | 1.5e-60 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82850.t1 | G7KQ08 | 97.0 | 504 | 15 | 0 | 1 | 504 | 1 | 504 | 2.1e-286 | 993.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90308 | MS.gene82850 | PPI |
| MS.gene82850 | MS.gene91712 | PPI |
| MS.gene64546 | MS.gene82850 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82850.t1 | MTR_6g005220 | 97.024 | 504 | 15 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1013 |
| MS.gene82850.t1 | MTR_6g005920 | 80.685 | 409 | 52 | 3 | 97 | 504 | 38 | 420 | 0.0 | 612 |
| MS.gene82850.t1 | MTR_7g086360 | 29.167 | 240 | 132 | 8 | 106 | 341 | 96 | 301 | 4.54e-19 | 89.0 |
| MS.gene82850.t1 | MTR_8g092620 | 23.675 | 283 | 174 | 10 | 104 | 385 | 56 | 297 | 2.06e-12 | 68.2 |
| MS.gene82850.t1 | MTR_3g075400 | 23.656 | 279 | 171 | 8 | 110 | 385 | 269 | 508 | 1.09e-11 | 67.4 |
| MS.gene82850.t1 | MTR_8g092620 | 22.182 | 275 | 175 | 8 | 104 | 378 | 63 | 298 | 3.41e-11 | 65.1 |
| MS.gene82850.t1 | MTR_1g072140 | 22.414 | 290 | 181 | 10 | 105 | 389 | 66 | 316 | 6.14e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82850.t1 | AT3G27640 | 48.649 | 518 | 248 | 7 | 1 | 503 | 1 | 515 | 1.78e-155 | 453 |
| MS.gene82850.t1 | AT3G27640 | 48.649 | 518 | 248 | 7 | 1 | 503 | 20 | 534 | 2.76e-155 | 453 |
| MS.gene82850.t1 | AT2G43770 | 28.870 | 239 | 132 | 8 | 107 | 341 | 95 | 299 | 2.78e-19 | 89.7 |
Find 105 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGAGTGGCTGACTTTAC+TGG | 0.187881 | 6.1:+1221339 | None:intergenic |
| AATACACTTCAACTTGAAAA+AGG | 0.208553 | 6.1:-1222108 | MS.gene82850:CDS |
| ATTCCAGTGTGCTGAAGTTT+TGG | 0.224406 | 6.1:-1222640 | MS.gene82850:intron |
| AGTCCCGAATAGTTCTCTTT+AGG | 0.258046 | 6.1:+1221181 | None:intergenic |
| ACCCTTCTTCGGATGGAAAA+TGG | 0.269667 | 6.1:+1221465 | None:intergenic |
| AACTGCGTTTATTCCATATA+TGG | 0.270324 | 6.1:+1221508 | None:intergenic |
| CGCGAGCTCAATTCCTTTCA+AGG | 0.273508 | 6.1:-1224795 | MS.gene82850:intron |
| CCATTCCAACTAACCTTTCC+TGG | 0.292255 | 6.1:+1222572 | None:intergenic |
| GTCCCGAATAGTTCTCTTTA+GGG | 0.300972 | 6.1:+1221182 | None:intergenic |
| ATAGTGTTACATCTGTTCTT+TGG | 0.306533 | 6.1:-1222795 | MS.gene82850:CDS |
| CCACTGCTGGGGCAGTAAAT+AGG | 0.317952 | 6.1:-1222750 | MS.gene82850:intron |
| AAGTGTCTTGGAGTGTTAAC+AGG | 0.318551 | 6.1:-1223331 | MS.gene82850:CDS |
| CAACTAACCTTTCCTGGTTC+AGG | 0.327191 | 6.1:+1222578 | None:intergenic |
| TTCTCCACGTCTATTAGAAT+TGG | 0.337090 | 6.1:+1223111 | None:intergenic |
| ACACAGATCCTCACTGCTTC+TGG | 0.354255 | 6.1:-1223754 | MS.gene82850:CDS |
| TGAACCCATCCATCGTAATT+AGG | 0.361799 | 6.1:+1224651 | None:intergenic |
| TGGGTCATGTGGTTCTTCAT+TGG | 0.365133 | 6.1:+1221359 | None:intergenic |
| TTCCATCCGAAGAAGGGTTA+TGG | 0.368408 | 6.1:-1221460 | MS.gene82850:CDS |
| AAGAACAGATGTAACACTAT+TGG | 0.392621 | 6.1:+1222798 | None:intergenic |
| GCAACAGTCCACTGTCATCT+TGG | 0.404685 | 6.1:+1222261 | None:intergenic |
| CTTCCCTAAAGAGAACTATT+CGG | 0.408098 | 6.1:-1221185 | MS.gene82850:CDS |
| TAATGACTCTTCAAAATAGT+TGG | 0.408960 | 6.1:+1221767 | None:intergenic |
| CAACTTACCTTGCCCCTCCT+TGG | 0.420211 | 6.1:+1222908 | None:intergenic |
| TTCCCTAAAGAGAACTATTC+GGG | 0.426325 | 6.1:-1221184 | MS.gene82850:CDS |
| TTTGCACTCTGTTCTAGGTA+TGG | 0.429468 | 6.1:+1221437 | None:intergenic |
| CTCATTTATAGGTTAAGGTA+TGG | 0.436651 | 6.1:-1223369 | MS.gene82850:intron |
| TGTCCCAAGTCAAGTGACTA+TGG | 0.438274 | 6.1:-1221390 | MS.gene82850:CDS |
| CAAGTTTCCATAGCCACTGC+TGG | 0.445098 | 6.1:-1222763 | MS.gene82850:CDS |
| TTAGTCTCTGGTTCAAGAGA+TGG | 0.446331 | 6.1:-1223166 | MS.gene82850:CDS |
| AAAGACCTAATTACGATGGA+TGG | 0.451394 | 6.1:-1224656 | MS.gene82850:CDS |
| GATGCATCTAACATCGTTTG+TGG | 0.452491 | 6.1:-1221931 | MS.gene82850:CDS |
| GTAATGCAAAAGCATATGTT+TGG | 0.455916 | 6.1:-1221903 | MS.gene82850:CDS |
| TGATACTCGTCGAAAATTCA+AGG | 0.459765 | 6.1:-1224390 | MS.gene82850:CDS |
| TACATCTGTTCTTTGGCTCA+AGG | 0.459933 | 6.1:-1222788 | MS.gene82850:CDS |
| GAAATCTTACCGGGATTAGT+TGG | 0.460195 | 6.1:+1223274 | None:intergenic |
| TTGGAGTGGCTGACTTTACT+GGG | 0.461369 | 6.1:+1221340 | None:intergenic |
| TGCAAAAGCATATGTTTGGC+AGG | 0.463133 | 6.1:-1221899 | MS.gene82850:intron |
| AATTACGATGGATGGGTTCA+CGG | 0.464238 | 6.1:-1224648 | MS.gene82850:CDS |
| CTGCTTCCTGCATGGATAGC+CGG | 0.464384 | 6.1:-1222235 | MS.gene82850:intron |
| TATTCTTGCTTTGTCTAATG+AGG | 0.469123 | 6.1:-1224432 | MS.gene82850:CDS |
| GGGGCTTTAAGATACTTTGA+AGG | 0.470467 | 6.1:-1222087 | MS.gene82850:CDS |
| CAAACGATGTTAGATGCATC+GGG | 0.471565 | 6.1:+1221934 | None:intergenic |
| CACTGCTTCTGGAGATCAAA+CGG | 0.476414 | 6.1:-1223743 | MS.gene82850:intron |
| GTTCAAGAAAAGAAGTGTCT+TGG | 0.477207 | 6.1:-1223343 | MS.gene82850:CDS |
| GTTGCTTTCTGCTTCCTGCA+TGG | 0.478726 | 6.1:-1222243 | MS.gene82850:CDS |
| CAACAGTCCACTGTCATCTT+GGG | 0.479623 | 6.1:+1222262 | None:intergenic |
| GTATGGCCATAACCCTTCTT+CGG | 0.481816 | 6.1:+1221454 | None:intergenic |
| GGGCTCTTCAAAGCAGACTC+TGG | 0.491351 | 6.1:+1221231 | None:intergenic |
| TGAAGTTGTGAGGTTGAAGA+AGG | 0.491472 | 6.1:+1224818 | None:intergenic |
| GATCAAATTCTGATGAAAGC+TGG | 0.491554 | 6.1:+1221277 | None:intergenic |
| TACTGCCCCAGCAGTGGCTA+TGG | 0.494116 | 6.1:+1222756 | None:intergenic |
| TCTTGCTCTTTCGTTCGCAA+AGG | 0.506100 | 6.1:-1224571 | MS.gene82850:intron |
| GTTCACGGATTCTTCGATGT+TGG | 0.509416 | 6.1:-1224633 | MS.gene82850:CDS |
| AGTTCAACAGATGTTGTCAA+TGG | 0.511715 | 6.1:-1222959 | MS.gene82850:CDS |
| GGCCATAACCCTTCTTCGGA+TGG | 0.512458 | 6.1:+1221458 | None:intergenic |
| TCTTCTCATCCAACTAATCC+CGG | 0.515730 | 6.1:-1223283 | MS.gene82850:intron |
| CTTGCTTTGTCTAATGAGGA+GGG | 0.518227 | 6.1:-1224428 | MS.gene82850:CDS |
| ACAAACGATGTTAGATGCAT+CGG | 0.518389 | 6.1:+1221933 | None:intergenic |
| TCAAGGACTACGACCAAGGA+GGG | 0.523704 | 6.1:-1222921 | MS.gene82850:CDS |
| AGGAAGTTACTGCAGTTGAC+TGG | 0.531215 | 6.1:-1221742 | MS.gene82850:intron |
| AGGATACCGGCTATCCATGC+AGG | 0.534164 | 6.1:+1222229 | None:intergenic |
| AAGTTTCCATAGCCACTGCT+GGG | 0.538834 | 6.1:-1222762 | MS.gene82850:CDS |
| TCTTGCTTTGTCTAATGAGG+AGG | 0.540053 | 6.1:-1224429 | MS.gene82850:CDS |
| CTGATGAAAGCTGGTTCTTG+TGG | 0.542716 | 6.1:+1221286 | None:intergenic |
| AAAATAGTTGGTTCCACGTG+AGG | 0.543878 | 6.1:+1221779 | None:intergenic |
| GGAGCACATATTCTGTATCA+AGG | 0.544194 | 6.1:-1222938 | MS.gene82850:CDS |
| CTAATATTCCATTGTCAGAC+CGG | 0.544954 | 6.1:+1221644 | None:intergenic |
| AGGAAGCGAGGATTTGTGAA+TGG | 0.548773 | 6.1:-1223949 | MS.gene82850:CDS |
| GACGTGGAGAAGTTAGCATA+TGG | 0.554547 | 6.1:-1223099 | MS.gene82850:intron |
| TGCAGGTGCCGGTCTGACAA+TGG | 0.566626 | 6.1:-1221652 | MS.gene82850:intron |
| TCATTTATAGGTTAAGGTAT+GGG | 0.570087 | 6.1:-1223368 | MS.gene82850:intron |
| AAGACCTAATTACGATGGAT+GGG | 0.570767 | 6.1:-1224655 | MS.gene82850:CDS |
| CAGTGTCTAGAAAGAAATGC+AGG | 0.575259 | 6.1:-1224362 | MS.gene82850:intron |
| TAGACCATAGTCACTTGACT+TGG | 0.580749 | 6.1:+1221386 | None:intergenic |
| TCCTTTCAGCAAAGATTACA+CGG | 0.580848 | 6.1:-1222299 | MS.gene82850:intron |
| CGAATAGTTCTCTTTAGGGA+AGG | 0.581795 | 6.1:+1221186 | None:intergenic |
| CCTAAAACAACTACATCTGA+AGG | 0.583029 | 6.1:-1221309 | MS.gene82850:CDS |
| AGCATGTCCTGAACCAGGAA+AGG | 0.585501 | 6.1:-1222585 | MS.gene82850:intron |
| GTTCTCTTTAGGGAAGGCGG+TGG | 0.586355 | 6.1:+1221192 | None:intergenic |
| TTTAGGTGGTGTGATTGGAG+TGG | 0.589905 | 6.1:+1221326 | None:intergenic |
| ACACAAGCATGTCCTGAACC+AGG | 0.600579 | 6.1:-1222590 | MS.gene82850:CDS |
| TTTGCGAACGAAAGAGCAAG+AGG | 0.611507 | 6.1:+1224573 | None:intergenic |
| TGTATCAAGGACTACGACCA+AGG | 0.613332 | 6.1:-1222925 | MS.gene82850:CDS |
| GCTTTAAGATACTTTGAAGG+AGG | 0.615669 | 6.1:-1222084 | MS.gene82850:CDS |
| CCTATTTACTGCCCCAGCAG+TGG | 0.615720 | 6.1:+1222750 | None:intergenic |
| TGGAGTGTTAACAGGGCACA+CGG | 0.618365 | 6.1:-1223323 | MS.gene82850:CDS |
| AGACCATAGTCACTTGACTT+GGG | 0.624402 | 6.1:+1221387 | None:intergenic |
| AGTGTCTTGGAGTGTTAACA+GGG | 0.627221 | 6.1:-1223330 | MS.gene82850:CDS |
| GTGGATTCAATACAGACGAA+GGG | 0.630002 | 6.1:+1221211 | None:intergenic |
| GCTGACTTTACTGGGTCATG+TGG | 0.630256 | 6.1:+1221348 | None:intergenic |
| ACTACGACCAAGGAGGGGCA+AGG | 0.633313 | 6.1:-1222915 | MS.gene82850:intron |
| ATAGTTCTCTTTAGGGAAGG+CGG | 0.633574 | 6.1:+1221189 | None:intergenic |
| AACTCCAATTCTAATAGACG+TGG | 0.646011 | 6.1:-1223115 | MS.gene82850:CDS |
| TGAGCTCGCGTGAAGTTGTG+AGG | 0.654520 | 6.1:+1224808 | None:intergenic |
| GGTGGATTCAATACAGACGA+AGG | 0.656152 | 6.1:+1221210 | None:intergenic |
| TCAGGTTGACAAGCCTCACG+TGG | 0.656772 | 6.1:-1221792 | MS.gene82850:intron |
| GCTGTAGCTACTCAGCATAA+CGG | 0.663584 | 6.1:-1224609 | MS.gene82850:CDS |
| CAAGGACTACGACCAAGGAG+GGG | 0.667467 | 6.1:-1222920 | MS.gene82850:CDS |
| ATCAAGGACTACGACCAAGG+AGG | 0.673071 | 6.1:-1222922 | MS.gene82850:CDS |
| AGTTTCCATAGCCACTGCTG+GGG | 0.674317 | 6.1:-1222761 | MS.gene82850:CDS |
| GGAGTGTTAACAGGGCACAC+GGG | 0.690755 | 6.1:-1223322 | MS.gene82850:CDS |
| GCATTTCTTTCTAGACACTG+AGG | 0.702558 | 6.1:+1224365 | None:intergenic |
| AGCTTGTCCCAAGATGACAG+TGG | 0.704030 | 6.1:-1222269 | MS.gene82850:CDS |
| TTTGATCTCCAGAAGCAGTG+AGG | 0.721465 | 6.1:+1223746 | None:intergenic |
| AAACGATGTTAGATGCATCG+GGG | 0.767496 | 6.1:+1221935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTACAAAAAATACTATTT+AGG | + | chr6.1:1223798-1223817 | None:intergenic | 10.0% |
| !!! | AATTGATTTTACTATTTAAA+TGG | - | chr6.1:1223335-1223354 | MS.gene82850:CDS | 10.0% |
| !!! | TATTGAATCATTTTTTATTA+AGG | - | chr6.1:1223943-1223962 | MS.gene82850:CDS | 10.0% |
| !! | AACTTCAATTATAATTTGAA+TGG | + | chr6.1:1223293-1223312 | None:intergenic | 15.0% |
| !! | AATTGTTTATTGTCTTAAAT+TGG | - | chr6.1:1222201-1222220 | MS.gene82850:intron | 15.0% |
| !!! | TCTTTTTCTCAAATTATAAA+CGG | + | chr6.1:1221870-1221889 | None:intergenic | 15.0% |
| !! | AATCATAGTTCAATTTATTC+AGG | + | chr6.1:1223524-1223543 | None:intergenic | 20.0% |
| !! | ACAGATAGTAAATATACTTT+AGG | + | chr6.1:1223012-1223031 | None:intergenic | 20.0% |
| !! | ACCTAAAATGTTAGAAAAAT+CGG | + | chr6.1:1221288-1221307 | None:intergenic | 20.0% |
| !! | ATATATATCAACACACTTTA+TGG | - | chr6.1:1221986-1222005 | MS.gene82850:intron | 20.0% |
| !! | CATATAATTGCAAAAATTGA+AGG | + | chr6.1:1222124-1222143 | None:intergenic | 20.0% |
| !! | GATTTATATGTTTACTAAGA+GGG | - | chr6.1:1223540-1223559 | MS.gene82850:intron | 20.0% |
| !! | TACAAAAAATACTATTTAGG+AGG | + | chr6.1:1223795-1223814 | None:intergenic | 20.0% |
| !! | TGATTTATATGTTTACTAAG+AGG | - | chr6.1:1223539-1223558 | MS.gene82850:intron | 20.0% |
| !! | TTACGCATAAAATATTATGT+GGG | - | chr6.1:1221489-1221508 | MS.gene82850:CDS | 20.0% |
| !! | TTCATTAAAAACTTATTCAC+AGG | + | chr6.1:1222978-1222997 | None:intergenic | 20.0% |
| !! | TTTACGCATAAAATATTATG+TGG | - | chr6.1:1221488-1221507 | MS.gene82850:CDS | 20.0% |
| !!! | AAGTTTTTTTAAGCTTTTAG+CGG | - | chr6.1:1223308-1223327 | MS.gene82850:CDS | 20.0% |
| !!! | ATTTTATGCGTAAAAACAAA+TGG | + | chr6.1:1221482-1221501 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTAAATCAAACCA+TGG | - | chr6.1:1223805-1223824 | MS.gene82850:intron | 20.0% |
| !!! | GACAATACTTTTTAAATTTC+TGG | + | chr6.1:1223391-1223410 | None:intergenic | 20.0% |
| !!! | TAACTTAACTTTTACAAATC+AGG | - | chr6.1:1224191-1224210 | MS.gene82850:intron | 20.0% |
| !!! | TTGATGATAATTTGAGAAAA+TGG | - | chr6.1:1221766-1221785 | MS.gene82850:CDS | 20.0% |
| !!! | TTTTATACTGAATGTTCTTA+TGG | - | chr6.1:1222607-1222626 | MS.gene82850:CDS | 20.0% |
| !!! | TTTTATGCGTAAAAACAAAT+GGG | + | chr6.1:1221481-1221500 | None:intergenic | 20.0% |
| !!! | TTTTTATTAAGGTGAGAATT+TGG | - | chr6.1:1223954-1223973 | MS.gene82850:intron | 20.0% |
| ! | AATACACTTCAACTTGAAAA+AGG | - | chr6.1:1223893-1223912 | MS.gene82850:intron | 25.0% |
| ! | AATCCCAAAATCAAAAAACA+AGG | + | chr6.1:1221519-1221538 | None:intergenic | 25.0% |
| ! | ATACACTTCAACTTGAAAAA+GGG | - | chr6.1:1223894-1223913 | MS.gene82850:intron | 25.0% |
| ! | GACTAAAATATCTGTAAGTT+TGG | + | chr6.1:1222821-1222840 | None:intergenic | 25.0% |
| ! | GATCTAAAAATGCAAAATTG+GGG | + | chr6.1:1224474-1224493 | None:intergenic | 25.0% |
| ! | GGATCTAAAAATGCAAAATT+GGG | + | chr6.1:1224475-1224494 | None:intergenic | 25.0% |
| ! | TAATGACTCTTCAAAATAGT+TGG | + | chr6.1:1224237-1224256 | None:intergenic | 25.0% |
| ! | TCAGTATAAAATCAGCTTAA+AGG | + | chr6.1:1222598-1222617 | None:intergenic | 25.0% |
| ! | TCATTTATAGGTTAAGGTAT+GGG | - | chr6.1:1222633-1222652 | MS.gene82850:CDS | 25.0% |
| ! | TGGATCTAAAAATGCAAAAT+TGG | + | chr6.1:1224476-1224495 | None:intergenic | 25.0% |
| ! | TGTTCATAAAATCTACGAAT+AGG | - | chr6.1:1222142-1222161 | MS.gene82850:intron | 25.0% |
| !! | AAACTTGATGCAAGAAATTT+TGG | + | chr6.1:1223988-1224007 | None:intergenic | 25.0% |
| !! | AACTTGATGCAAGAAATTTT+GGG | + | chr6.1:1223987-1224006 | None:intergenic | 25.0% |
| !! | AAGTGAGTGATGAATTTTAA+CGG | + | chr6.1:1221233-1221252 | None:intergenic | 25.0% |
| !! | TCCGATTTTTCTAACATTTT+AGG | - | chr6.1:1221284-1221303 | MS.gene82850:CDS | 25.0% |
| !! | TTTTGATGTCAATTGGATTA+AGG | - | chr6.1:1222095-1222114 | MS.gene82850:CDS | 25.0% |
| !!! | AATCTGTATATTGTTTTAGC+AGG | + | chr6.1:1222316-1222335 | None:intergenic | 25.0% |
| !!! | CAACCTTGTTTTTTGATTTT+GGG | - | chr6.1:1221513-1221532 | MS.gene82850:CDS | 25.0% |
| !!! | TCAACCTTGTTTTTTGATTT+TGG | - | chr6.1:1221512-1221531 | MS.gene82850:CDS | 25.0% |
| !!! | TCTAACTTAATTTGTTTTGC+AGG | - | chr6.1:1224332-1224351 | MS.gene82850:intron | 25.0% |
| !!! | TGCATTTTTAGATCCATATA+TGG | - | chr6.1:1224480-1224499 | MS.gene82850:intron | 25.0% |
| AACAAGCTCTGCAATTTAAA+AGG | + | chr6.1:1222468-1222487 | None:intergenic | 30.0% | |
| AACTGCGTTTATTCCATATA+TGG | + | chr6.1:1224496-1224515 | None:intergenic | 30.0% | |
| AAGAACAGATGTAACACTAT+TGG | + | chr6.1:1223206-1223225 | None:intergenic | 30.0% | |
| AAGGGTCAAAACTTATTAAC+AGG | + | chr6.1:1223152-1223171 | None:intergenic | 30.0% | |
| AATACTATTTAGGAGGATAC+CGG | + | chr6.1:1223788-1223807 | None:intergenic | 30.0% | |
| ACAAGCTCTGCAATTTAAAA+GGG | + | chr6.1:1222467-1222486 | None:intergenic | 30.0% | |
| AGTTTATATACAACGAGTCT+GGG | - | chr6.1:1223479-1223498 | MS.gene82850:intron | 30.0% | |
| ATAGTGTTACATCTGTTCTT+TGG | - | chr6.1:1223206-1223225 | MS.gene82850:intron | 30.0% | |
| CAATCAACTACTCTATAGTT+TGG | - | chr6.1:1224141-1224160 | MS.gene82850:intron | 30.0% | |
| CTCAAATTATAAACGGTGTT+AGG | + | chr6.1:1221863-1221882 | None:intergenic | 30.0% | |
| CTCATTTATAGGTTAAGGTA+TGG | - | chr6.1:1222632-1222651 | MS.gene82850:CDS | 30.0% | |
| CTGTAAGTTTGGAGATAAAA+GGG | + | chr6.1:1222810-1222829 | None:intergenic | 30.0% | |
| GTTAGAATCTCATATCAGAT+CGG | + | chr6.1:1224318-1224337 | None:intergenic | 30.0% | |
| TACACTTCAACTTGAAAAAG+GGG | - | chr6.1:1223895-1223914 | MS.gene82850:intron | 30.0% | |
| TACTCTATAGTTTGGTACTT+TGG | - | chr6.1:1224149-1224168 | MS.gene82850:intron | 30.0% | |
| TAGTTTATATACAACGAGTC+TGG | - | chr6.1:1223478-1223497 | MS.gene82850:intron | 30.0% | |
| TATTCTTGCTTTGTCTAATG+AGG | - | chr6.1:1221569-1221588 | MS.gene82850:intron | 30.0% | |
| TCTGTAAGTTTGGAGATAAA+AGG | + | chr6.1:1222811-1222830 | None:intergenic | 30.0% | |
| TGACTGGTAAATTGGAAATT+AGG | - | chr6.1:1224275-1224294 | MS.gene82850:intron | 30.0% | |
| TTCTTATGGTGCTCATTTAT+AGG | - | chr6.1:1222621-1222640 | MS.gene82850:CDS | 30.0% | |
| ! | AGGTTAGAGTTGTTATTAGA+AGG | + | chr6.1:1223171-1223190 | None:intergenic | 30.0% |
| ! | ATGCAGTTTTTGATGTCAAT+TGG | - | chr6.1:1222088-1222107 | MS.gene82850:CDS | 30.0% |
| ! | ATTGGTTTACATTTGTTTGC+AGG | - | chr6.1:1222219-1222238 | MS.gene82850:intron | 30.0% |
| ! | GGTTAGAGTTGTTATTAGAA+GGG | + | chr6.1:1223170-1223189 | None:intergenic | 30.0% |
| ! | GTAATGCAAAAGCATATGTT+TGG | - | chr6.1:1224098-1224117 | MS.gene82850:intron | 30.0% |
| ! | TCATAGCATTGAGTTAGAAT+TGG | - | chr6.1:1222528-1222547 | MS.gene82850:intron | 30.0% |
| !! | TATTTTGAAGAGTCATTACG+AGG | - | chr6.1:1224239-1224258 | MS.gene82850:intron | 30.0% |
| !!! | CTTACAGATATTTTAGTCTC+TGG | - | chr6.1:1222823-1222842 | MS.gene82850:intron | 30.0% |
| !!! | TGGAGTTTTTTTAGGAGATA+TGG | + | chr6.1:1224753-1224772 | None:intergenic | 30.0% |
| AAAGACCTAATTACGATGGA+TGG | - | chr6.1:1221345-1221364 | MS.gene82850:CDS | 35.0% | |
| AACTCCAATTCTAATAGACG+TGG | - | chr6.1:1222886-1222905 | MS.gene82850:intron | 35.0% | |
| AAGACCTAATTACGATGGAT+GGG | - | chr6.1:1221346-1221365 | MS.gene82850:CDS | 35.0% | |
| AAGCTCTGCAATTTAAAAGG+GGG | + | chr6.1:1222465-1222484 | None:intergenic | 35.0% | |
| AATAACAACTCTAACCTGTC+AGG | - | chr6.1:1223174-1223193 | MS.gene82850:CDS | 35.0% | |
| ACAAACGATGTTAGATGCAT+CGG | + | chr6.1:1224071-1224090 | None:intergenic | 35.0% | |
| AGATAAACTCTGCAAGAAAG+AGG | + | chr6.1:1223869-1223888 | None:intergenic | 35.0% | |
| AGTTCAACAGATGTTGTCAA+TGG | - | chr6.1:1223042-1223061 | MS.gene82850:intron | 35.0% | |
| CAAGCTCTGCAATTTAAAAG+GGG | + | chr6.1:1222466-1222485 | None:intergenic | 35.0% | |
| CAATGCAGTGTTTCAAAATG+CGG | + | chr6.1:1222409-1222428 | None:intergenic | 35.0% | |
| CCTAAAACAACTACATCTGA+AGG | - | chr6.1:1224692-1224711 | MS.gene82850:intron | 35.0% | |
| CGAAAAAGACCTAATTACGA+TGG | - | chr6.1:1221341-1221360 | MS.gene82850:CDS | 35.0% | |
| CTAATATTCCATTGTCAGAC+CGG | + | chr6.1:1224360-1224379 | None:intergenic | 35.0% | |
| CTTCCCTAAAGAGAACTATT+CGG | - | chr6.1:1224816-1224835 | MS.gene82850:CDS | 35.0% | |
| GATCAAATTCTGATGAAAGC+TGG | + | chr6.1:1224727-1224746 | None:intergenic | 35.0% | |
| GGTAAATTGGAAATTAGGCA+TGG | - | chr6.1:1224280-1224299 | MS.gene82850:intron | 35.0% | |
| GTTTATATACAACGAGTCTG+GGG | - | chr6.1:1223480-1223499 | MS.gene82850:intron | 35.0% | |
| TCCTTTCAGCAAAGATTACA+CGG | - | chr6.1:1223702-1223721 | MS.gene82850:intron | 35.0% | |
| TGATACTCGTCGAAAATTCA+AGG | - | chr6.1:1221611-1221630 | MS.gene82850:intron | 35.0% | |
| TGCATACACAGAAATCTTAC+CGG | + | chr6.1:1222740-1222759 | None:intergenic | 35.0% | |
| TGGTGCTCATTTATAGGTTA+AGG | - | chr6.1:1222627-1222646 | MS.gene82850:CDS | 35.0% | |
| TGTTAGACACTTACGCATAT+CGG | - | chr6.1:1221918-1221937 | MS.gene82850:CDS | 35.0% | |
| TTCCCTAAAGAGAACTATTC+GGG | - | chr6.1:1224817-1224836 | MS.gene82850:CDS | 35.0% | |
| TTCTCCACGTCTATTAGAAT+TGG | + | chr6.1:1222893-1222912 | None:intergenic | 35.0% | |
| ! | AAGAAGGATTGAGATTTTCG+AGG | + | chr6.1:1221170-1221189 | None:intergenic | 35.0% |
| ! | ACACCTTTGATAAGAAGTGT+TGG | - | chr6.1:1221950-1221969 | MS.gene82850:intron | 35.0% |
| ! | AGATGGATCTTTTCGTCTTT+GGG | - | chr6.1:1222852-1222871 | MS.gene82850:intron | 35.0% |
| ! | GAGGGTATATGCATTTCTTA+TGG | - | chr6.1:1223558-1223577 | MS.gene82850:intron | 35.0% |
| ! | TTTGCCTCTTTTGATATCAG+AGG | - | chr6.1:1222032-1222051 | MS.gene82850:intron | 35.0% |
| !! | CCTTCAGATGTAGTTGTTTT+AGG | + | chr6.1:1224695-1224714 | None:intergenic | 35.0% |
| !! | GAATTTTAACGGACCTTGAA+AGG | + | chr6.1:1221222-1221241 | None:intergenic | 35.0% |
| !! | GCTTTAAGATACTTTGAAGG+AGG | - | chr6.1:1223917-1223936 | MS.gene82850:CDS | 35.0% |
| !! | GTTCAAGAAAAGAAGTGTCT+TGG | - | chr6.1:1222658-1222677 | MS.gene82850:intron | 35.0% |
| !!! | TCAGATGTAGTTGTTTTAGG+TGG | + | chr6.1:1224692-1224711 | None:intergenic | 35.0% |
| !!! | TTAATTTGTTTTGCAGGTGC+CGG | - | chr6.1:1224338-1224357 | MS.gene82850:intron | 35.0% |
| AAACGATGTTAGATGCATCG+GGG | + | chr6.1:1224069-1224088 | None:intergenic | 40.0% | |
| ACCGTGTAATCTTTGCTGAA+AGG | + | chr6.1:1223706-1223725 | None:intergenic | 40.0% | |
| ACTGCAGTTGACTGGTAAAT+TGG | - | chr6.1:1224267-1224286 | MS.gene82850:intron | 40.0% | |
| AGACCATAGTCACTTGACTT+GGG | + | chr6.1:1224617-1224636 | None:intergenic | 40.0% | |
| AGTCCCGAATAGTTCTCTTT+AGG | + | chr6.1:1224823-1224842 | None:intergenic | 40.0% | |
| CAAACGATGTTAGATGCATC+GGG | + | chr6.1:1224070-1224089 | None:intergenic | 40.0% | |
| CAGTGTCTAGAAAGAAATGC+AGG | - | chr6.1:1221639-1221658 | MS.gene82850:CDS | 40.0% | |
| CTTGCTTTGTCTAATGAGGA+GGG | - | chr6.1:1221573-1221592 | MS.gene82850:intron | 40.0% | |
| GATGAACATTCTCGAAACCA+TGG | + | chr6.1:1223825-1223844 | None:intergenic | 40.0% | |
| GATGCATCTAACATCGTTTG+TGG | - | chr6.1:1224070-1224089 | MS.gene82850:intron | 40.0% | |
| GCACCAACACTTCTTATCAA+AGG | + | chr6.1:1221956-1221975 | None:intergenic | 40.0% | |
| GCATACACAGAAATCTTACC+GGG | + | chr6.1:1222739-1222758 | None:intergenic | 40.0% | |
| GCATTTCTTTCTAGACACTG+AGG | + | chr6.1:1221639-1221658 | None:intergenic | 40.0% | |
| GCTTCCTCTGATATCAAAAG+AGG | + | chr6.1:1222039-1222058 | None:intergenic | 40.0% | |
| GGAATTGAACACATGAGACA+GGG | + | chr6.1:1224033-1224052 | None:intergenic | 40.0% | |
| GGAGCACATATTCTGTATCA+AGG | - | chr6.1:1223063-1223082 | MS.gene82850:intron | 40.0% | |
| GTCCCGAATAGTTCTCTTTA+GGG | + | chr6.1:1224822-1224841 | None:intergenic | 40.0% | |
| GTGGATTCAATACAGACGAA+GGG | + | chr6.1:1224793-1224812 | None:intergenic | 40.0% | |
| TAGACCATAGTCACTTGACT+TGG | + | chr6.1:1224618-1224637 | None:intergenic | 40.0% | |
| TCTGGGGAGTTTACAAATTG+AGG | - | chr6.1:1223496-1223515 | MS.gene82850:intron | 40.0% | |
| TCTTCTCATCCAACTAATCC+CGG | - | chr6.1:1222718-1222737 | MS.gene82850:intron | 40.0% | |
| TCTTGCTTTGTCTAATGAGG+AGG | - | chr6.1:1221572-1221591 | MS.gene82850:intron | 40.0% | |
| TGAACCCATCCATCGTAATT+AGG | + | chr6.1:1221353-1221372 | None:intergenic | 40.0% | |
| TGAAGTTGTGAGGTTGAAGA+AGG | + | chr6.1:1221186-1221205 | None:intergenic | 40.0% | |
| TGGAATTGAACACATGAGAC+AGG | + | chr6.1:1224034-1224053 | None:intergenic | 40.0% | |
| TGTCTCATGTGTTCAATTCC+AGG | - | chr6.1:1224033-1224052 | MS.gene82850:intron | 40.0% | |
| TTGGTACTTTGGTTGCAGTA+AGG | - | chr6.1:1224160-1224179 | MS.gene82850:intron | 40.0% | |
| ! | AAAATAGTTGGTTCCACGTG+AGG | + | chr6.1:1224225-1224244 | None:intergenic | 40.0% |
| ! | AAGTGTCTTGGAGTGTTAAC+AGG | - | chr6.1:1222670-1222689 | MS.gene82850:intron | 40.0% |
| ! | AATTACGATGGATGGGTTCA+CGG | - | chr6.1:1221353-1221372 | MS.gene82850:CDS | 40.0% |
| ! | ACAAGTATCGTGTGAGAATC+AGG | + | chr6.1:1222366-1222385 | None:intergenic | 40.0% |
| ! | AGCATTTTGCACTCTGTTCT+AGG | + | chr6.1:1224572-1224591 | None:intergenic | 40.0% |
| ! | AGTGTCTTGGAGTGTTAACA+GGG | - | chr6.1:1222671-1222690 | MS.gene82850:intron | 40.0% |
| ! | ATAGTTCTCTTTAGGGAAGG+CGG | + | chr6.1:1224815-1224834 | None:intergenic | 40.0% |
| ! | ATTCCAGTGTGCTGAAGTTT+TGG | - | chr6.1:1223361-1223380 | MS.gene82850:CDS | 40.0% |
| ! | CGAATAGTTCTCTTTAGGGA+AGG | + | chr6.1:1224818-1224837 | None:intergenic | 40.0% |
| ! | GAAATCTTACCGGGATTAGT+TGG | + | chr6.1:1222730-1222749 | None:intergenic | 40.0% |
| ! | GAGATGGATCTTTTCGTCTT+TGG | - | chr6.1:1222851-1222870 | MS.gene82850:intron | 40.0% |
| ! | TACATCTGTTCTTTGGCTCA+AGG | - | chr6.1:1223213-1223232 | MS.gene82850:intron | 40.0% |
| ! | TCCATTTTCCATCCGAAGAA+GGG | - | chr6.1:1224535-1224554 | MS.gene82850:intron | 40.0% |
| ! | TGCAAAAGCATATGTTTGGC+AGG | - | chr6.1:1224102-1224121 | MS.gene82850:intron | 40.0% |
| ! | TTAGTCTCTGGTTCAAGAGA+TGG | - | chr6.1:1222835-1222854 | MS.gene82850:intron | 40.0% |
| ! | TTCCAGTGTGCTGAAGTTTT+GGG | - | chr6.1:1223362-1223381 | MS.gene82850:intron | 40.0% |
| ! | TTTGCACTCTGTTCTAGGTA+TGG | + | chr6.1:1224567-1224586 | None:intergenic | 40.0% |
| ! | TTTTGATATCAGAGGAAGCG+AGG | - | chr6.1:1222040-1222059 | MS.gene82850:intron | 40.0% |
| !! | GGGGCTTTAAGATACTTTGA+AGG | - | chr6.1:1223914-1223933 | MS.gene82850:CDS | 40.0% |
| !! | TTGAAGAGTACCCAACATCT+GGG | - | chr6.1:1222438-1222457 | MS.gene82850:intron | 40.0% |
| !! | TTTGAAGAGTACCCAACATC+TGG | - | chr6.1:1222437-1222456 | MS.gene82850:intron | 40.0% |
| !!! | GCAGACTCTGGAGTTTTTTT+AGG | + | chr6.1:1224761-1224780 | None:intergenic | 40.0% |
| !!! | GTTGTTTTAGGTGGTGTGAT+TGG | + | chr6.1:1224683-1224702 | None:intergenic | 40.0% |
| AAGTTTCCATAGCCACTGCT+GGG | - | chr6.1:1223239-1223258 | MS.gene82850:intron | 45.0% | |
| AATGGAACTGAGATGTGCAG+TGG | - | chr6.1:1223447-1223466 | MS.gene82850:intron | 45.0% | |
| ACCCTTCTTCGGATGGAAAA+TGG | + | chr6.1:1224539-1224558 | None:intergenic | 45.0% | |
| ACTTACGCATATCGGACACT+TGG | - | chr6.1:1221926-1221945 | MS.gene82850:CDS | 45.0% | |
| AGGAAGCGAGGATTTGTGAA+TGG | - | chr6.1:1222052-1222071 | MS.gene82850:intron | 45.0% | |
| AGGAAGTTACTGCAGTTGAC+TGG | - | chr6.1:1224259-1224278 | MS.gene82850:intron | 45.0% | |
| ATCCCAAAACTTCAGCACAC+TGG | + | chr6.1:1223367-1223386 | None:intergenic | 45.0% | |
| CAACAGTCCACTGTCATCTT+GGG | + | chr6.1:1223742-1223761 | None:intergenic | 45.0% | |
| CAACTAACCTTTCCTGGTTC+AGG | + | chr6.1:1223426-1223445 | None:intergenic | 45.0% | |
| CATGAGACAGGGAAAAAGTC+AGG | + | chr6.1:1224022-1224041 | None:intergenic | 45.0% | |
| CCATTCCAACTAACCTTTCC+TGG | + | chr6.1:1223432-1223451 | None:intergenic | 45.0% | |
| CTGAACCAGGAAAGGTTAGT+TGG | - | chr6.1:1223424-1223443 | MS.gene82850:intron | 45.0% | |
| GACGTGGAGAAGTTAGCATA+TGG | - | chr6.1:1222902-1222921 | MS.gene82850:intron | 45.0% | |
| GCTGTAGCTACTCAGCATAA+CGG | - | chr6.1:1221392-1221411 | MS.gene82850:CDS | 45.0% | |
| GGATCGACAAATCGGATCAT+AGG | + | chr6.1:1221842-1221861 | None:intergenic | 45.0% | |
| GTATGGCCATAACCCTTCTT+CGG | + | chr6.1:1224550-1224569 | None:intergenic | 45.0% | |
| GTTCACGGATTCTTCGATGT+TGG | - | chr6.1:1221368-1221387 | MS.gene82850:CDS | 45.0% | |
| TCTTGCTCTTTCGTTCGCAA+AGG | - | chr6.1:1221430-1221449 | MS.gene82850:CDS | 45.0% | |
| TGGGTCATGTGGTTCTTCAT+TGG | + | chr6.1:1224645-1224664 | None:intergenic | 45.0% | |
| TGTATCAAGGACTACGACCA+AGG | - | chr6.1:1223076-1223095 | MS.gene82850:intron | 45.0% | |
| TGTATGCTTCTGCAATGCAC+TGG | - | chr6.1:1222762-1222781 | MS.gene82850:CDS | 45.0% | |
| TGTCCCAAGTCAAGTGACTA+TGG | - | chr6.1:1224611-1224630 | MS.gene82850:CDS | 45.0% | |
| TTCCATCCGAAGAAGGGTTA+TGG | - | chr6.1:1224541-1224560 | MS.gene82850:intron | 45.0% | |
| TTTAGGTGGTGTGATTGGAG+TGG | + | chr6.1:1224678-1224697 | None:intergenic | 45.0% | |
| TTTGATCTCCAGAAGCAGTG+AGG | + | chr6.1:1222258-1222277 | None:intergenic | 45.0% | |
| TTTGCGAACGAAAGAGCAAG+AGG | + | chr6.1:1221431-1221450 | None:intergenic | 45.0% | |
| ! | ATTGGAGTGGCTGACTTTAC+TGG | + | chr6.1:1224665-1224684 | None:intergenic | 45.0% |
| ! | CACTGCTTCTGGAGATCAAA+CGG | - | chr6.1:1222258-1222277 | MS.gene82850:CDS | 45.0% |
| ! | CCAGGAAAGGTTAGTTGGAA+TGG | - | chr6.1:1223429-1223448 | MS.gene82850:intron | 45.0% |
| ! | CGGTGTTAGGATCGACAAAT+CGG | + | chr6.1:1221850-1221869 | None:intergenic | 45.0% |
| ! | CTCCATTTTCCATCCGAAGA+AGG | - | chr6.1:1224534-1224553 | MS.gene82850:intron | 45.0% |
| ! | CTGATGAAAGCTGGTTCTTG+TGG | + | chr6.1:1224718-1224737 | None:intergenic | 45.0% |
| ! | GGTGGATTCAATACAGACGA+AGG | + | chr6.1:1224794-1224813 | None:intergenic | 45.0% |
| ! | TTGGAGTGGCTGACTTTACT+GGG | + | chr6.1:1224664-1224683 | None:intergenic | 45.0% |
| !! | AAGAAGTGTTGGTGCTGCAA+AGG | - | chr6.1:1221961-1221980 | MS.gene82850:intron | 45.0% |
| AAAAGGGGGTCCCAGATGTT+GGG | + | chr6.1:1222451-1222470 | None:intergenic | 50.0% | |
| ACACAAGCATGTCCTGAACC+AGG | - | chr6.1:1223411-1223430 | MS.gene82850:intron | 50.0% | |
| ACACAGATCCTCACTGCTTC+TGG | - | chr6.1:1222247-1222266 | MS.gene82850:CDS | 50.0% | |
| ACTATTGGAAGCAGCCTGAC+AGG | + | chr6.1:1223191-1223210 | None:intergenic | 50.0% | |
| AGCATGTCCTGAACCAGGAA+AGG | - | chr6.1:1223416-1223435 | MS.gene82850:intron | 50.0% | |
| AGCTTGTCCCAAGATGACAG+TGG | - | chr6.1:1223732-1223751 | MS.gene82850:intron | 50.0% | |
| AGTTTCCATAGCCACTGCTG+GGG | - | chr6.1:1223240-1223259 | MS.gene82850:intron | 50.0% | |
| ATCAAGGACTACGACCAAGG+AGG | - | chr6.1:1223079-1223098 | MS.gene82850:intron | 50.0% | |
| CAAGTTTCCATAGCCACTGC+TGG | - | chr6.1:1223238-1223257 | MS.gene82850:intron | 50.0% | |
| CATGAACACCTGATACGACG+TGG | - | chr6.1:1221726-1221745 | MS.gene82850:intron | 50.0% | |
| CGCGAGCTCAATTCCTTTCA+AGG | - | chr6.1:1221206-1221225 | MS.gene82850:CDS | 50.0% | |
| GCAACAGTCCACTGTCATCT+TGG | + | chr6.1:1223743-1223762 | None:intergenic | 50.0% | |
| GTCAATGTCCACGTCGTATC+AGG | + | chr6.1:1221737-1221756 | None:intergenic | 50.0% | |
| TAAAAGGGGGTCCCAGATGT+TGG | + | chr6.1:1222452-1222471 | None:intergenic | 50.0% | |
| TCAAGGACTACGACCAAGGA+GGG | - | chr6.1:1223080-1223099 | MS.gene82850:intron | 50.0% | |
| TGCTGGGGCAGTAAATAGGT+TGG | - | chr6.1:1223255-1223274 | MS.gene82850:intron | 50.0% | |
| ! | GCTGACTTTACTGGGTCATG+TGG | + | chr6.1:1224656-1224675 | None:intergenic | 50.0% |
| ! | GTTGCTTTCTGCTTCCTGCA+TGG | - | chr6.1:1223758-1223777 | MS.gene82850:CDS | 50.0% |
| ! | TGGAGTGTTAACAGGGCACA+CGG | - | chr6.1:1222678-1222697 | MS.gene82850:intron | 50.0% |
| CAACTTACCTTGCCCCTCCT+TGG | + | chr6.1:1223096-1223115 | None:intergenic | 55.0% | |
| CAAGGACTACGACCAAGGAG+GGG | - | chr6.1:1223081-1223100 | MS.gene82850:intron | 55.0% | |
| CCACTGCTGGGGCAGTAAAT+AGG | - | chr6.1:1223251-1223270 | MS.gene82850:intron | 55.0% | |
| CCTATTTACTGCCCCAGCAG+TGG | + | chr6.1:1223254-1223273 | None:intergenic | 55.0% | |
| CTGCTTCCTGCATGGATAGC+CGG | - | chr6.1:1223766-1223785 | MS.gene82850:intron | 55.0% | |
| GGCCATAACCCTTCTTCGGA+TGG | + | chr6.1:1224546-1224565 | None:intergenic | 55.0% | |
| GGGCTCTTCAAAGCAGACTC+TGG | + | chr6.1:1224773-1224792 | None:intergenic | 55.0% | |
| TGAGCTCGCGTGAAGTTGTG+AGG | + | chr6.1:1221196-1221215 | None:intergenic | 55.0% | |
| ! | AGGATACCGGCTATCCATGC+AGG | + | chr6.1:1223775-1223794 | None:intergenic | 55.0% |
| ! | GGAGTGTTAACAGGGCACAC+GGG | - | chr6.1:1222679-1222698 | MS.gene82850:intron | 55.0% |
| ! | GTTCTCTTTAGGGAAGGCGG+TGG | + | chr6.1:1224812-1224831 | None:intergenic | 55.0% |
| !! | TCAGGTTGACAAGCCTCACG+TGG | - | chr6.1:1224209-1224228 | MS.gene82850:intron | 55.0% |
| ACTACGACCAAGGAGGGGCA+AGG | - | chr6.1:1223086-1223105 | MS.gene82850:intron | 60.0% | |
| GGAGGGGCAAGGTAAGTTGC+TGG | - | chr6.1:1223097-1223116 | MS.gene82850:intron | 60.0% | |
| GGGGCAAGGTAAGTTGCTGG+TGG | - | chr6.1:1223100-1223119 | MS.gene82850:CDS | 60.0% | |
| TACTGCCCCAGCAGTGGCTA+TGG | + | chr6.1:1223248-1223267 | None:intergenic | 60.0% | |
| !! | TGCAGGTGCCGGTCTGACAA+TGG | - | chr6.1:1224349-1224368 | MS.gene82850:intron | 60.0% |
| CATCGGGGCTAATCGCAGCC+TGG | + | chr6.1:1224054-1224073 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 1221161 | 1224862 | 1221161 | ID=MS.gene82850 |
| chr6.1 | mRNA | 1221161 | 1224862 | 1221161 | ID=MS.gene82850.t1;Parent=MS.gene82850 |
| chr6.1 | exon | 1224796 | 1224862 | 1224796 | ID=MS.gene82850.t1.exon1;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1224796 | 1224862 | 1224796 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1224572 | 1224684 | 1224572 | ID=MS.gene82850.t1.exon2;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1224572 | 1224684 | 1224572 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1224363 | 1224471 | 1224363 | ID=MS.gene82850.t1.exon3;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1224363 | 1224471 | 1224363 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1223907 | 1223971 | 1223907 | ID=MS.gene82850.t1.exon4;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1223907 | 1223971 | 1223907 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1223744 | 1223782 | 1223744 | ID=MS.gene82850.t1.exon5;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1223744 | 1223782 | 1223744 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1223284 | 1223380 | 1223284 | ID=MS.gene82850.t1.exon6;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1223284 | 1223380 | 1223284 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1223100 | 1223193 | 1223100 | ID=MS.gene82850.t1.exon7;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1223100 | 1223193 | 1223100 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1222916 | 1222979 | 1222916 | ID=MS.gene82850.t1.exon8;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1222916 | 1222979 | 1222916 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1222751 | 1222827 | 1222751 | ID=MS.gene82850.t1.exon9;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1222751 | 1222827 | 1222751 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1222586 | 1222655 | 1222586 | ID=MS.gene82850.t1.exon10;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1222586 | 1222655 | 1222586 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1222236 | 1222312 | 1222236 | ID=MS.gene82850.t1.exon11;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1222236 | 1222312 | 1222236 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1222059 | 1222143 | 1222059 | ID=MS.gene82850.t1.exon12;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1222059 | 1222143 | 1222059 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1221900 | 1221968 | 1221900 | ID=MS.gene82850.t1.exon13;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1221900 | 1221968 | 1221900 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1221743 | 1221810 | 1221743 | ID=MS.gene82850.t1.exon14;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1221743 | 1221810 | 1221743 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1221621 | 1221669 | 1221621 | ID=MS.gene82850.t1.exon15;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1221621 | 1221669 | 1221621 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| chr6.1 | exon | 1221161 | 1221532 | 1221161 | ID=MS.gene82850.t1.exon16;Parent=MS.gene82850.t1 |
| chr6.1 | CDS | 1221161 | 1221532 | 1221161 | ID=cds.MS.gene82850.t1;Parent=MS.gene82850.t1 |
| Gene Sequence |
| Protein sequence |
