Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83655.t1 | GAU48230.1 | 57.7 | 338 | 130 | 4 | 1 | 331 | 2 | 333 | 7.60E-95 | 357.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83655.t1 | Q9ZV93 | 26.8 | 343 | 203 | 16 | 14 | 326 | 20 | 344 | 3.1e-12 | 74.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83655.t1 | A0A2Z6PD36 | 57.7 | 338 | 130 | 4 | 1 | 331 | 2 | 333 | 5.5e-95 | 357.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052065 | MS.gene83655 | 0.824208 | 9.14E-54 | -1.69E-46 |
| MS.gene058580 | MS.gene83655 | 0.803599 | 3.23E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83655.t1 | MTR_4g047950 | 55.899 | 356 | 151 | 4 | 1 | 353 | 1 | 353 | 3.01e-121 | 355 |
| MS.gene83655.t1 | MTR_8g468910 | 39.474 | 380 | 196 | 12 | 1 | 354 | 29 | 400 | 4.92e-60 | 199 |
| MS.gene83655.t1 | MTR_8g465380 | 38.753 | 369 | 203 | 11 | 1 | 354 | 1 | 361 | 3.85e-56 | 187 |
| MS.gene83655.t1 | MTR_8g465650 | 38.786 | 379 | 190 | 14 | 1 | 354 | 1 | 362 | 1.16e-54 | 184 |
| MS.gene83655.t1 | MTR_6g092430 | 38.965 | 367 | 196 | 12 | 1 | 350 | 1 | 356 | 1.27e-53 | 182 |
| MS.gene83655.t1 | MTR_7g017280 | 39.714 | 350 | 175 | 13 | 3 | 326 | 139 | 478 | 4.74e-51 | 178 |
| MS.gene83655.t1 | MTR_4g050930 | 34.639 | 332 | 197 | 8 | 3 | 325 | 20 | 340 | 5.74e-50 | 172 |
| MS.gene83655.t1 | MTR_4g104300 | 39.879 | 331 | 182 | 9 | 1 | 323 | 101 | 422 | 1.03e-49 | 173 |
| MS.gene83655.t1 | MTR_4g050930 | 34.535 | 333 | 198 | 8 | 3 | 326 | 20 | 341 | 2.47e-49 | 173 |
| MS.gene83655.t1 | MTR_3g023270 | 36.339 | 366 | 205 | 12 | 1 | 359 | 1 | 345 | 4.98e-49 | 169 |
| MS.gene83655.t1 | MTR_4g024780 | 39.233 | 339 | 174 | 11 | 2 | 323 | 142 | 465 | 1.72e-48 | 171 |
| MS.gene83655.t1 | MTR_4g023670 | 39.514 | 329 | 173 | 12 | 2 | 320 | 114 | 426 | 8.70e-48 | 168 |
| MS.gene83655.t1 | MTR_5g060750 | 37.460 | 315 | 178 | 9 | 25 | 330 | 31 | 335 | 1.55e-47 | 165 |
| MS.gene83655.t1 | MTR_4g024680 | 38.554 | 332 | 182 | 12 | 2 | 323 | 143 | 462 | 1.67e-47 | 172 |
| MS.gene83655.t1 | MTR_4g024680 | 34.324 | 370 | 194 | 10 | 2 | 360 | 511 | 842 | 2.41e-40 | 152 |
| MS.gene83655.t1 | MTR_3g036320 | 36.919 | 344 | 186 | 12 | 2 | 326 | 5 | 336 | 1.12e-46 | 163 |
| MS.gene83655.t1 | MTR_5g460900 | 37.342 | 316 | 178 | 10 | 25 | 330 | 31 | 336 | 2.57e-46 | 162 |
| MS.gene83655.t1 | MTR_4g023710 | 37.994 | 329 | 181 | 11 | 2 | 321 | 136 | 450 | 9.71e-45 | 160 |
| MS.gene83655.t1 | MTR_4g026550 | 36.337 | 344 | 182 | 7 | 2 | 327 | 136 | 460 | 2.96e-44 | 159 |
| MS.gene83655.t1 | MTR_7g080440 | 37.963 | 324 | 166 | 14 | 1 | 304 | 1 | 309 | 3.99e-44 | 156 |
| MS.gene83655.t1 | MTR_6g009020 | 36.413 | 368 | 182 | 14 | 14 | 350 | 18 | 364 | 9.03e-44 | 155 |
| MS.gene83655.t1 | MTR_4g050940 | 32.778 | 360 | 218 | 10 | 14 | 361 | 69 | 416 | 1.87e-42 | 156 |
| MS.gene83655.t1 | MTR_7g084080 | 36.934 | 287 | 161 | 7 | 1 | 276 | 6 | 283 | 1.15e-41 | 147 |
| MS.gene83655.t1 | MTR_5g087940 | 32.938 | 337 | 206 | 10 | 4 | 336 | 18 | 338 | 1.84e-41 | 150 |
| MS.gene83655.t1 | MTR_5g066560 | 36.709 | 316 | 173 | 10 | 4 | 304 | 2 | 305 | 2.70e-41 | 148 |
| MS.gene83655.t1 | MTR_3g099900 | 35.714 | 336 | 186 | 11 | 4 | 325 | 10 | 329 | 1.11e-40 | 147 |
| MS.gene83655.t1 | MTR_5g060570 | 37.500 | 232 | 136 | 3 | 14 | 243 | 19 | 243 | 2.79e-40 | 143 |
| MS.gene83655.t1 | MTR_8g066650 | 34.421 | 337 | 199 | 9 | 1 | 325 | 65 | 391 | 4.43e-40 | 147 |
| MS.gene83655.t1 | MTR_4g092980 | 31.915 | 376 | 209 | 13 | 10 | 352 | 12 | 373 | 5.50e-40 | 147 |
| MS.gene83655.t1 | MTR_6g018600 | 35.873 | 315 | 177 | 12 | 9 | 311 | 49 | 350 | 1.01e-39 | 145 |
| MS.gene83655.t1 | MTR_4g024810 | 37.152 | 323 | 181 | 11 | 24 | 335 | 137 | 448 | 5.89e-39 | 144 |
| MS.gene83655.t1 | MTR_7g021630 | 35.144 | 313 | 164 | 10 | 8 | 302 | 13 | 304 | 9.30e-39 | 142 |
| MS.gene83655.t1 | MTR_7g021630 | 35.144 | 313 | 164 | 10 | 8 | 302 | 13 | 304 | 1.27e-38 | 141 |
| MS.gene83655.t1 | MTR_4g092430 | 33.134 | 335 | 202 | 10 | 2 | 325 | 34 | 357 | 2.42e-38 | 143 |
| MS.gene83655.t1 | MTR_3g023330 | 34.375 | 288 | 168 | 7 | 1 | 277 | 1 | 278 | 3.14e-38 | 140 |
| MS.gene83655.t1 | MTR_5g044800 | 34.161 | 322 | 195 | 8 | 14 | 326 | 32 | 345 | 1.03e-37 | 140 |
| MS.gene83655.t1 | MTR_4g090940 | 34.140 | 372 | 201 | 15 | 2 | 349 | 143 | 494 | 1.11e-37 | 143 |
| MS.gene83655.t1 | MTR_5g044860 | 34.161 | 322 | 195 | 8 | 14 | 326 | 32 | 345 | 1.79e-37 | 140 |
| MS.gene83655.t1 | MTR_3g023440 | 37.049 | 305 | 162 | 11 | 14 | 304 | 5 | 293 | 2.99e-37 | 138 |
| MS.gene83655.t1 | MTR_6g088700 | 31.884 | 345 | 198 | 13 | 1 | 326 | 1 | 327 | 3.86e-37 | 138 |
| MS.gene83655.t1 | MTR_3g023470 | 33.159 | 383 | 209 | 15 | 3 | 357 | 4 | 367 | 6.69e-37 | 137 |
| MS.gene83655.t1 | MTR_4g092430 | 31.266 | 387 | 226 | 14 | 2 | 361 | 34 | 407 | 9.73e-37 | 138 |
| MS.gene83655.t1 | MTR_1g038760 | 35.015 | 337 | 185 | 13 | 3 | 327 | 6 | 320 | 1.40e-36 | 136 |
| MS.gene83655.t1 | MTR_1g038760 | 35.015 | 337 | 185 | 13 | 3 | 327 | 6 | 320 | 1.63e-36 | 135 |
| MS.gene83655.t1 | MTR_4g092440 | 33.746 | 323 | 174 | 10 | 8 | 302 | 28 | 338 | 2.32e-36 | 137 |
| MS.gene83655.t1 | MTR_4g092440 | 33.540 | 322 | 176 | 10 | 8 | 302 | 28 | 338 | 7.79e-36 | 137 |
| MS.gene83655.t1 | MTR_4g014260 | 35.952 | 331 | 190 | 12 | 4 | 325 | 18 | 335 | 8.82e-36 | 135 |
| MS.gene83655.t1 | MTR_3g052940 | 33.043 | 345 | 176 | 12 | 9 | 304 | 25 | 363 | 1.10e-35 | 135 |
| MS.gene83655.t1 | MTR_3g052940 | 33.043 | 345 | 176 | 12 | 9 | 304 | 25 | 363 | 1.64e-35 | 135 |
| MS.gene83655.t1 | MTR_3g052940 | 33.043 | 345 | 176 | 12 | 9 | 304 | 25 | 363 | 1.68e-35 | 135 |
| MS.gene83655.t1 | MTR_6g025160 | 35.985 | 264 | 148 | 10 | 14 | 268 | 103 | 354 | 1.72e-35 | 133 |
| MS.gene83655.t1 | MTR_1g067190 | 33.134 | 335 | 185 | 10 | 3 | 330 | 6 | 308 | 2.34e-35 | 132 |
| MS.gene83655.t1 | MTR_3g006580 | 34.659 | 352 | 193 | 16 | 3 | 332 | 25 | 361 | 2.71e-35 | 133 |
| MS.gene83655.t1 | MTR_3g052990 | 33.514 | 370 | 189 | 14 | 9 | 326 | 25 | 389 | 3.63e-35 | 134 |
| MS.gene83655.t1 | MTR_4g014260 | 35.952 | 331 | 190 | 12 | 4 | 325 | 18 | 335 | 3.69e-35 | 134 |
| MS.gene83655.t1 | MTR_6g018660 | 34.862 | 327 | 170 | 13 | 4 | 302 | 9 | 320 | 5.03e-35 | 132 |
| MS.gene83655.t1 | MTR_4g051480 | 32.278 | 316 | 188 | 10 | 4 | 302 | 17 | 323 | 1.90e-34 | 134 |
| MS.gene83655.t1 | MTR_4g092300 | 32.278 | 316 | 188 | 10 | 4 | 302 | 17 | 323 | 2.26e-34 | 134 |
| MS.gene83655.t1 | MTR_3g463830 | 36.032 | 247 | 143 | 6 | 5 | 244 | 58 | 296 | 2.08e-33 | 127 |
| MS.gene83655.t1 | MTR_1g077420 | 35.968 | 253 | 134 | 7 | 10 | 243 | 2 | 245 | 1.12e-32 | 123 |
| MS.gene83655.t1 | MTR_3g014550 | 32.337 | 368 | 216 | 14 | 3 | 357 | 2 | 349 | 4.20e-32 | 124 |
| MS.gene83655.t1 | MTR_2g101950 | 31.268 | 355 | 212 | 12 | 3 | 337 | 29 | 371 | 4.42e-32 | 124 |
| MS.gene83655.t1 | MTR_2g101950 | 31.268 | 355 | 212 | 12 | 3 | 337 | 70 | 412 | 6.61e-32 | 124 |
| MS.gene83655.t1 | MTR_3g005980 | 34.156 | 243 | 140 | 6 | 1 | 232 | 1 | 234 | 6.62e-32 | 123 |
| MS.gene83655.t1 | MTR_2g101950 | 31.268 | 355 | 212 | 12 | 3 | 337 | 71 | 413 | 6.91e-32 | 124 |
| MS.gene83655.t1 | MTR_4g092360 | 31.861 | 317 | 187 | 8 | 14 | 321 | 52 | 348 | 7.77e-32 | 124 |
| MS.gene83655.t1 | MTR_3g023490 | 35.495 | 293 | 155 | 11 | 27 | 304 | 71 | 344 | 8.36e-32 | 124 |
| MS.gene83655.t1 | MTR_3g019240 | 34.226 | 336 | 189 | 14 | 5 | 325 | 21 | 339 | 9.07e-32 | 124 |
| MS.gene83655.t1 | MTR_3g014590 | 31.608 | 367 | 219 | 13 | 3 | 357 | 2 | 348 | 1.77e-31 | 122 |
| MS.gene83655.t1 | MTR_4g045680 | 31.231 | 333 | 204 | 10 | 4 | 324 | 8 | 327 | 3.67e-31 | 122 |
| MS.gene83655.t1 | MTR_2g090845 | 29.882 | 338 | 208 | 9 | 14 | 332 | 16 | 343 | 4.25e-31 | 121 |
| MS.gene83655.t1 | MTR_6g018560 | 30.978 | 368 | 180 | 14 | 1 | 330 | 23 | 354 | 1.43e-30 | 120 |
| MS.gene83655.t1 | MTR_6g025270 | 31.897 | 348 | 203 | 15 | 1 | 330 | 23 | 354 | 1.66e-30 | 120 |
| MS.gene83655.t1 | MTR_3g019200 | 35.016 | 317 | 161 | 15 | 8 | 302 | 6 | 299 | 1.73e-30 | 120 |
| MS.gene83655.t1 | MTR_7g021550 | 32.154 | 311 | 165 | 10 | 2 | 301 | 5 | 280 | 1.81e-30 | 118 |
| MS.gene83655.t1 | MTR_6g088705 | 36.967 | 211 | 118 | 5 | 3 | 205 | 11 | 214 | 3.11e-30 | 115 |
| MS.gene83655.t1 | MTR_3g019220 | 35.625 | 320 | 161 | 15 | 5 | 302 | 21 | 317 | 4.28e-30 | 121 |
| MS.gene83655.t1 | MTR_3g019220 | 31.765 | 255 | 147 | 11 | 66 | 302 | 319 | 564 | 1.15e-16 | 81.6 |
| MS.gene83655.t1 | MTR_6g018570 | 30.707 | 368 | 181 | 14 | 1 | 330 | 23 | 354 | 2.46e-29 | 118 |
| MS.gene83655.t1 | MTR_2g101950 | 33.054 | 239 | 147 | 6 | 3 | 237 | 71 | 300 | 5.97e-29 | 115 |
| MS.gene83655.t1 | MTR_3g463820 | 33.205 | 259 | 144 | 10 | 5 | 248 | 8 | 252 | 9.50e-29 | 113 |
| MS.gene83655.t1 | MTR_3g036240 | 33.138 | 341 | 188 | 16 | 3 | 325 | 6 | 324 | 4.08e-28 | 113 |
| MS.gene83655.t1 | MTR_3g036330 | 32.836 | 268 | 101 | 9 | 3 | 252 | 2 | 208 | 2.12e-27 | 110 |
| MS.gene83655.t1 | MTR_3g007830 | 34.468 | 235 | 134 | 7 | 1 | 224 | 1 | 226 | 1.47e-26 | 108 |
| MS.gene83655.t1 | MTR_3g008050 | 31.285 | 358 | 200 | 15 | 1 | 327 | 2 | 344 | 2.40e-26 | 108 |
| MS.gene83655.t1 | MTR_1g094760 | 36.190 | 210 | 123 | 4 | 2 | 205 | 14 | 218 | 4.45e-26 | 110 |
| MS.gene83655.t1 | MTR_4g051510 | 31.629 | 313 | 178 | 14 | 2 | 300 | 21 | 311 | 1.03e-25 | 105 |
| MS.gene83655.t1 | MTR_5g020820 | 29.545 | 352 | 198 | 13 | 9 | 357 | 18 | 322 | 2.18e-25 | 105 |
| MS.gene83655.t1 | MTR_3g007790 | 36.681 | 229 | 121 | 9 | 9 | 224 | 23 | 240 | 5.82e-25 | 104 |
| MS.gene83655.t1 | MTR_4g024830 | 44.186 | 172 | 81 | 8 | 160 | 320 | 120 | 287 | 8.07e-25 | 103 |
| MS.gene83655.t1 | MTR_2g079010 | 42.604 | 169 | 89 | 4 | 135 | 300 | 15 | 178 | 1.98e-24 | 99.4 |
| MS.gene83655.t1 | MTR_0438s0020 | 29.513 | 349 | 177 | 12 | 2 | 326 | 55 | 358 | 1.36e-23 | 100 |
| MS.gene83655.t1 | MTR_4g045740 | 45.082 | 122 | 63 | 3 | 2 | 120 | 10 | 130 | 1.01e-22 | 95.1 |
| MS.gene83655.t1 | MTR_3g005990 | 33.333 | 252 | 137 | 9 | 1 | 232 | 1 | 241 | 6.98e-21 | 93.6 |
| MS.gene83655.t1 | MTR_3g099930 | 34.928 | 209 | 83 | 7 | 5 | 201 | 11 | 178 | 9.54e-21 | 89.0 |
| MS.gene83655.t1 | MTR_5g079450 | 34.756 | 164 | 95 | 4 | 29 | 188 | 49 | 204 | 5.14e-20 | 87.4 |
| MS.gene83655.t1 | MTR_7g108910 | 34.518 | 197 | 120 | 4 | 68 | 262 | 42 | 231 | 2.84e-19 | 87.0 |
| MS.gene83655.t1 | MTR_5g020610 | 32.941 | 170 | 83 | 4 | 37 | 205 | 40 | 179 | 7.66e-19 | 85.9 |
| MS.gene83655.t1 | MTR_6g025090 | 43.925 | 107 | 57 | 2 | 9 | 113 | 49 | 154 | 1.62e-18 | 84.7 |
| MS.gene83655.t1 | MTR_4g051640 | 40.741 | 108 | 54 | 3 | 1 | 101 | 14 | 118 | 1.76e-18 | 82.0 |
| MS.gene83655.t1 | MTR_8g017280 | 28.571 | 252 | 151 | 7 | 14 | 245 | 38 | 280 | 3.43e-17 | 81.6 |
| MS.gene83655.t1 | MTR_4g077520 | 28.421 | 380 | 190 | 15 | 1 | 361 | 1 | 317 | 6.71e-17 | 81.3 |
| MS.gene83655.t1 | MTR_8g017280 | 28.571 | 252 | 151 | 7 | 14 | 245 | 38 | 280 | 9.05e-17 | 81.6 |
| MS.gene83655.t1 | MTR_1g048340 | 28.013 | 307 | 181 | 9 | 4 | 304 | 7 | 279 | 9.26e-17 | 80.5 |
| MS.gene83655.t1 | MTR_4g092510 | 33.810 | 210 | 114 | 7 | 136 | 325 | 179 | 383 | 2.28e-16 | 80.9 |
| MS.gene83655.t1 | MTR_0896s0010 | 36.752 | 117 | 61 | 5 | 14 | 127 | 57 | 163 | 3.23e-15 | 73.2 |
| MS.gene83655.t1 | MTR_8g085430 | 30.000 | 230 | 129 | 8 | 18 | 228 | 17 | 233 | 8.38e-15 | 75.1 |
| MS.gene83655.t1 | MTR_1g041245 | 35.673 | 171 | 87 | 8 | 14 | 176 | 13 | 168 | 2.53e-14 | 73.9 |
| MS.gene83655.t1 | MTR_4g125740 | 31.076 | 251 | 143 | 9 | 96 | 332 | 1 | 235 | 3.26e-14 | 72.4 |
| MS.gene83655.t1 | MTR_3g109982 | 31.852 | 270 | 153 | 14 | 7 | 267 | 10 | 257 | 9.89e-14 | 72.8 |
| MS.gene83655.t1 | MTR_3g110010 | 31.852 | 270 | 153 | 14 | 7 | 267 | 10 | 257 | 1.24e-13 | 72.8 |
| MS.gene83655.t1 | MTR_7g032380 | 29.319 | 191 | 117 | 6 | 14 | 198 | 13 | 191 | 6.72e-13 | 69.3 |
| MS.gene83655.t1 | MTR_8g062850 | 32.663 | 199 | 111 | 9 | 150 | 326 | 61 | 258 | 6.92e-13 | 69.3 |
| MS.gene83655.t1 | MTR_3g036310 | 32.843 | 204 | 117 | 8 | 131 | 326 | 29 | 220 | 8.76e-13 | 67.8 |
| MS.gene83655.t1 | MTR_8g062850 | 32.663 | 199 | 111 | 9 | 150 | 326 | 61 | 258 | 9.03e-13 | 68.6 |
| MS.gene83655.t1 | MTR_0492s0020 | 31.188 | 202 | 117 | 9 | 2 | 198 | 74 | 258 | 1.02e-12 | 69.3 |
| MS.gene83655.t1 | MTR_8g062850 | 32.663 | 199 | 111 | 9 | 150 | 326 | 61 | 258 | 1.13e-12 | 68.2 |
| MS.gene83655.t1 | MTR_0543s0010 | 31.188 | 202 | 117 | 9 | 2 | 198 | 74 | 258 | 1.14e-12 | 69.3 |
| MS.gene83655.t1 | MTR_3g105060 | 28.455 | 246 | 137 | 10 | 14 | 246 | 16 | 235 | 1.28e-12 | 68.6 |
| MS.gene83655.t1 | MTR_1880s0010 | 25.455 | 275 | 168 | 7 | 4 | 274 | 10 | 251 | 1.59e-12 | 67.0 |
| MS.gene83655.t1 | MTR_8g062850 | 32.663 | 199 | 111 | 9 | 150 | 326 | 61 | 258 | 1.64e-12 | 68.2 |
| MS.gene83655.t1 | MTR_4g051560 | 30.556 | 252 | 148 | 8 | 92 | 325 | 8 | 250 | 2.20e-12 | 68.2 |
| MS.gene83655.t1 | MTR_4g080773 | 27.528 | 356 | 206 | 13 | 14 | 335 | 21 | 358 | 1.46e-11 | 65.9 |
| MS.gene83655.t1 | MTR_2g099980 | 35.652 | 115 | 69 | 3 | 9 | 120 | 35 | 147 | 1.52e-11 | 65.9 |
| MS.gene83655.t1 | MTR_4g080773 | 27.809 | 356 | 205 | 14 | 14 | 335 | 21 | 358 | 1.58e-11 | 65.9 |
| MS.gene83655.t1 | MTR_4g081030 | 26.776 | 366 | 228 | 14 | 6 | 355 | 11 | 352 | 3.00e-11 | 64.7 |
| MS.gene83655.t1 | MTR_3g052930 | 31.383 | 188 | 113 | 7 | 125 | 302 | 147 | 328 | 3.51e-11 | 63.9 |
| MS.gene83655.t1 | MTR_7g023310 | 27.143 | 210 | 128 | 7 | 3 | 203 | 17 | 210 | 5.52e-11 | 63.9 |
| MS.gene83655.t1 | MTR_3g048290 | 26.695 | 236 | 151 | 7 | 3 | 228 | 14 | 237 | 5.78e-11 | 63.9 |
| MS.gene83655.t1 | MTR_3g082890 | 30.588 | 170 | 106 | 4 | 14 | 180 | 99 | 259 | 6.63e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83655.t1 | AT1G55660 | 33.163 | 196 | 111 | 9 | 14 | 200 | 55 | 239 | 5.99e-17 | 81.6 |
| MS.gene83655.t1 | AT4G00315 | 32.308 | 195 | 112 | 9 | 15 | 200 | 5 | 188 | 1.20e-16 | 81.3 |
| MS.gene83655.t1 | AT1G55660 | 33.163 | 196 | 111 | 9 | 14 | 200 | 55 | 239 | 1.32e-16 | 81.3 |
| MS.gene83655.t1 | AT1G78750 | 26.891 | 357 | 210 | 17 | 3 | 326 | 6 | 344 | 5.84e-15 | 76.3 |
| MS.gene83655.t1 | AT1G78750 | 26.891 | 357 | 210 | 17 | 3 | 326 | 6 | 344 | 5.84e-15 | 76.3 |
| MS.gene83655.t1 | AT1G78760 | 28.571 | 203 | 132 | 7 | 2 | 201 | 6 | 198 | 2.22e-14 | 74.3 |
| MS.gene83655.t1 | AT4G14103 | 27.457 | 346 | 202 | 15 | 11 | 328 | 7 | 331 | 1.87e-13 | 71.2 |
| MS.gene83655.t1 | AT4G14103 | 27.457 | 346 | 202 | 15 | 11 | 328 | 7 | 331 | 1.87e-13 | 71.2 |
| MS.gene83655.t1 | AT4G14103 | 27.457 | 346 | 202 | 15 | 11 | 328 | 7 | 331 | 2.01e-13 | 71.6 |
| MS.gene83655.t1 | AT1G66300 | 27.760 | 317 | 179 | 13 | 14 | 302 | 31 | 325 | 4.88e-13 | 70.5 |
| MS.gene83655.t1 | AT5G60610 | 26.568 | 271 | 159 | 11 | 14 | 268 | 4 | 250 | 3.21e-12 | 67.8 |
| MS.gene83655.t1 | AT5G60610 | 26.568 | 271 | 159 | 11 | 14 | 268 | 4 | 250 | 3.21e-12 | 67.8 |
| MS.gene83655.t1 | AT5G56420 | 26.977 | 215 | 147 | 5 | 11 | 224 | 5 | 210 | 3.50e-12 | 67.8 |
| MS.gene83655.t1 | AT5G56420 | 26.977 | 215 | 147 | 5 | 11 | 224 | 5 | 210 | 3.50e-12 | 67.8 |
| MS.gene83655.t1 | AT5G56420 | 26.977 | 215 | 147 | 5 | 11 | 224 | 5 | 210 | 3.50e-12 | 67.8 |
| MS.gene83655.t1 | AT4G15060 | 27.203 | 261 | 170 | 9 | 9 | 262 | 23 | 270 | 1.23e-11 | 65.9 |
| MS.gene83655.t1 | AT4G14096 | 25.816 | 337 | 212 | 15 | 11 | 328 | 7 | 324 | 1.41e-11 | 65.9 |
| MS.gene83655.t1 | AT4G14096 | 25.816 | 337 | 212 | 15 | 11 | 328 | 7 | 324 | 1.41e-11 | 65.9 |
| MS.gene83655.t1 | AT1G66310 | 30.882 | 204 | 120 | 9 | 3 | 200 | 10 | 198 | 2.08e-11 | 65.5 |
| MS.gene83655.t1 | AT4G15060 | 27.344 | 256 | 166 | 9 | 14 | 262 | 174 | 416 | 3.32e-11 | 65.1 |
Find 59 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTCAAACTTAATTAAT+TGG | 0.167096 | 6.3:-52053329 | MS.gene83655:CDS |
| ACTGGAGATAATGAAGTTTA+TGG | 0.176700 | 6.3:-52054084 | MS.gene83655:CDS |
| ATTTACCTGATATTGATTTA+AGG | 0.177498 | 6.3:-52053899 | MS.gene83655:CDS |
| AACATTGATGTTCAAGATAT+TGG | 0.225719 | 6.3:-52053357 | MS.gene83655:CDS |
| TGCAAAAGAGCTTACCTTTA+GGG | 0.261293 | 6.3:+52053257 | None:intergenic |
| TGCTGATTATGTTAAGATAT+TGG | 0.262018 | 6.3:-52053295 | MS.gene83655:CDS |
| AGAAATTTGTTGCAAGACTA+TGG | 0.282013 | 6.3:+52053997 | None:intergenic |
| AACATGTGACAATTCGAAAA+TGG | 0.304113 | 6.3:+52053588 | None:intergenic |
| GGCTAAATTGAGGAAGGTTC+TGG | 0.319782 | 6.3:+52053964 | None:intergenic |
| ATAACCCTGTCTAAGAGTTT+AGG | 0.327584 | 6.3:+52053858 | None:intergenic |
| TTGACCATAGGCACAATTCT+AGG | 0.338559 | 6.3:-52053486 | MS.gene83655:CDS |
| AAAATCTTCACTTGCCGAAC+AGG | 0.343156 | 6.3:-52052970 | MS.gene83655:CDS |
| GTTTACAAATTATGAAATAT+AGG | 0.359136 | 6.3:-52052943 | None:intergenic |
| CTACTAGATGGAAGGACCTT+TGG | 0.389580 | 6.3:-52054028 | MS.gene83655:CDS |
| GCGTGCCTTAAATCAATATC+AGG | 0.392751 | 6.3:+52053894 | None:intergenic |
| CGGAGTAGAAAGCACAACTT+TGG | 0.400227 | 6.3:+52053458 | None:intergenic |
| ATGTTGACCACTTTGGTCCT+TGG | 0.406240 | 6.3:-52053570 | MS.gene83655:CDS |
| AACTTAATTAATTGGTTACA+TGG | 0.417128 | 6.3:-52053321 | MS.gene83655:CDS |
| TGACCACTTTGGTCCTTGGC+TGG | 0.426117 | 6.3:-52053566 | MS.gene83655:CDS |
| GCCATAAAATGTAGGGAACT+TGG | 0.438678 | 6.3:+52053672 | None:intergenic |
| GCTAAATTGAGGAAGGTTCT+GGG | 0.440854 | 6.3:+52053965 | None:intergenic |
| GTCAAATACATCATATGAAA+AGG | 0.444347 | 6.3:-52053027 | MS.gene83655:CDS |
| TTCAACCTAAACTCTTAGAC+AGG | 0.446743 | 6.3:-52053863 | MS.gene83655:CDS |
| ATTTGTAAACACTCCCTGTT+CGG | 0.460331 | 6.3:+52052956 | None:intergenic |
| ATGAAAAGGAGAAATTTAGA+AGG | 0.462514 | 6.3:-52053013 | MS.gene83655:CDS |
| ATAGAACTGAAGACACAAAC+TGG | 0.467639 | 6.3:+52053943 | None:intergenic |
| AGTTCTCTTACTCTCTTTCG+TGG | 0.470922 | 6.3:-52053429 | MS.gene83655:CDS |
| TAAACTCTTAGACAGGGTTA+TGG | 0.479027 | 6.3:-52053856 | MS.gene83655:CDS |
| CTTGTATATTGTCTACTAGA+TGG | 0.481761 | 6.3:-52054040 | MS.gene83655:CDS |
| TTTCAATGCCATAAAATGTA+GGG | 0.486658 | 6.3:+52053665 | None:intergenic |
| ATCTCCAGTAAAATAGAGTC+AGG | 0.489141 | 6.3:+52054098 | None:intergenic |
| AGAGTAAGAGAACTAAGGTT+CGG | 0.498244 | 6.3:+52053438 | None:intergenic |
| GGAGTAGAAAGCACAACTTT+GGG | 0.499858 | 6.3:+52053459 | None:intergenic |
| AGCTCCTAGAATTGTGCCTA+TGG | 0.504571 | 6.3:+52053482 | None:intergenic |
| GAAAGAGAGTAAGAGAACTA+AGG | 0.519916 | 6.3:+52053433 | None:intergenic |
| TCTCTCTTCAACTACCCTAA+AGG | 0.529440 | 6.3:-52053271 | MS.gene83655:intron |
| TTGTCACATGTTGACCACTT+TGG | 0.538827 | 6.3:-52053577 | MS.gene83655:CDS |
| ACTTAATTAATTGGTTACAT+GGG | 0.548434 | 6.3:-52053320 | MS.gene83655:CDS |
| GACACAAACTGGCTAAATTG+AGG | 0.551814 | 6.3:+52053954 | None:intergenic |
| AAGCTTTCTAGTTTGACCAT+AGG | 0.559242 | 6.3:-52053498 | MS.gene83655:CDS |
| AAAGATTGCACGTAGAGACT+TGG | 0.565139 | 6.3:+52053397 | None:intergenic |
| AAATCTTCACTTGCCGAACA+GGG | 0.576465 | 6.3:-52052969 | MS.gene83655:CDS |
| GATGGGCATGAAAATATGCA+AGG | 0.579651 | 6.3:+52053747 | None:intergenic |
| CAATGAATTCAATCTAGCAA+AGG | 0.585836 | 6.3:+52053067 | None:intergenic |
| TATATTGTCTACTAGATGGA+AGG | 0.586945 | 6.3:-52054036 | MS.gene83655:CDS |
| GACTATGGAGACATCGCCAA+AGG | 0.609341 | 6.3:+52054012 | None:intergenic |
| GAAATAGAAAAGAAGAACGG+AGG | 0.611384 | 6.3:-52054136 | MS.gene83655:CDS |
| CAAACTGGCTAAATTGAGGA+AGG | 0.614922 | 6.3:+52053958 | None:intergenic |
| GAATTCAATCTAGCAAAGGA+AGG | 0.627879 | 6.3:+52053071 | None:intergenic |
| AAAGAAATAGAAAAGAAGAA+CGG | 0.629886 | 6.3:-52054139 | MS.gene83655:CDS |
| CTTGGAAGTTCTATCATCCG+AGG | 0.638340 | 6.3:+52053690 | None:intergenic |
| GATATTGATTTAAGGCACGC+TGG | 0.647701 | 6.3:-52053891 | MS.gene83655:CDS |
| ATGGGCATGAAAATATGCAA+GGG | 0.650694 | 6.3:+52053748 | None:intergenic |
| GCTTAGAATTAGATATGCAG+AGG | 0.652992 | 6.3:+52053517 | None:intergenic |
| ATTGATTTAAGGCACGCTGG+TGG | 0.670223 | 6.3:-52053888 | MS.gene83655:CDS |
| GGGTTAGTATACACCAGCCA+AGG | 0.672919 | 6.3:+52053553 | None:intergenic |
| ACACCAGCCAAGGACCAAAG+TGG | 0.674411 | 6.3:+52053563 | None:intergenic |
| TTGGAAGTTCTATCATCCGA+GGG | 0.676959 | 6.3:+52053691 | None:intergenic |
| TCAACCTAAACTCTTAGACA+GGG | 0.680560 | 6.3:-52053862 | MS.gene83655:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTATTCAAACTTAATTAAT+TGG | - | chr6.3:52053764-52053783 | MS.gene83655:CDS | 15.0% |
| !!! | ATTTTAAGATATGTTAATGA+TGG | + | chr6.3:52053367-52053386 | None:intergenic | 15.0% |
| !!! | TTTTAAGATATGTTAATGAT+GGG | + | chr6.3:52053366-52053385 | None:intergenic | 15.0% |
| !! | AAAGAAAAGAAAAAAAAGAG+AGG | + | chr6.3:52053865-52053884 | None:intergenic | 20.0% |
| !! | AAAGAAATAGAAAAGAAGAA+CGG | - | chr6.3:52052954-52052973 | MS.gene83655:CDS | 20.0% |
| !! | AACTTAATTAATTGGTTACA+TGG | - | chr6.3:52053772-52053791 | MS.gene83655:CDS | 20.0% |
| !! | ACTTAATTAATTGGTTACAT+GGG | - | chr6.3:52053773-52053792 | MS.gene83655:CDS | 20.0% |
| !!! | ATTTACCTGATATTGATTTA+AGG | - | chr6.3:52053194-52053213 | MS.gene83655:intron | 20.0% |
| ! | AACATTGATGTTCAAGATAT+TGG | - | chr6.3:52053736-52053755 | MS.gene83655:CDS | 25.0% |
| ! | ATGAAAAGGAGAAATTTAGA+AGG | - | chr6.3:52054080-52054099 | MS.gene83655:CDS | 25.0% |
| ! | GTCAAATACATCATATGAAA+AGG | - | chr6.3:52054066-52054085 | MS.gene83655:CDS | 25.0% |
| ! | TGAACAAATAGATTTAGCAT+TGG | + | chr6.3:52053920-52053939 | None:intergenic | 25.0% |
| ! | TTTCAATGCCATAAAATGTA+GGG | + | chr6.3:52053431-52053450 | None:intergenic | 25.0% |
| !! | TGCTGATTATGTTAAGATAT+TGG | - | chr6.3:52053798-52053817 | MS.gene83655:CDS | 25.0% |
| !! | TTTTCAATGCCATAAAATGT+AGG | + | chr6.3:52053432-52053451 | None:intergenic | 25.0% |
| AACATGTGACAATTCGAAAA+TGG | + | chr6.3:52053508-52053527 | None:intergenic | 30.0% | |
| AACCTGCACAAACATTATAT+TGG | + | chr6.3:52053963-52053982 | None:intergenic | 30.0% | |
| ACTGGAGATAATGAAGTTTA+TGG | - | chr6.3:52053009-52053028 | MS.gene83655:CDS | 30.0% | |
| CAATGAATTCAATCTAGCAA+AGG | + | chr6.3:52054029-52054048 | None:intergenic | 30.0% | |
| CTTGTATATTGTCTACTAGA+TGG | - | chr6.3:52053053-52053072 | MS.gene83655:CDS | 30.0% | |
| TATATTGTCTACTAGATGGA+AGG | - | chr6.3:52053057-52053076 | MS.gene83655:CDS | 30.0% | |
| ! | ACTTTTGTTGCAAATGAAGA+CGG | - | chr6.3:52053472-52053491 | MS.gene83655:CDS | 30.0% |
| ! | TTTTCCTGACTCTATTTTAC+TGG | - | chr6.3:52052991-52053010 | MS.gene83655:CDS | 30.0% |
| !! | AGAAATTTGTTGCAAGACTA+TGG | + | chr6.3:52053099-52053118 | None:intergenic | 30.0% |
| AGAGTAAGAGAACTAAGGTT+CGG | + | chr6.3:52053658-52053677 | None:intergenic | 35.0% | |
| ATAACCCTGTCTAAGAGTTT+AGG | + | chr6.3:52053238-52053257 | None:intergenic | 35.0% | |
| ATAGAACTGAAGACACAAAC+TGG | + | chr6.3:52053153-52053172 | None:intergenic | 35.0% | |
| ATCTCCAGTAAAATAGAGTC+AGG | + | chr6.3:52052998-52053017 | None:intergenic | 35.0% | |
| ATGCAAAAGAGCTTACCTTT+AGG | + | chr6.3:52053840-52053859 | None:intergenic | 35.0% | |
| ATGGGCATGAAAATATGCAA+GGG | + | chr6.3:52053348-52053367 | None:intergenic | 35.0% | |
| ATTTGTAAACACTCCCTGTT+CGG | + | chr6.3:52054140-52054159 | None:intergenic | 35.0% | |
| GAAAGAGAGTAAGAGAACTA+AGG | + | chr6.3:52053663-52053682 | None:intergenic | 35.0% | |
| GAAATAGAAAAGAAGAACGG+AGG | - | chr6.3:52052957-52052976 | MS.gene83655:CDS | 35.0% | |
| GAATTCAATCTAGCAAAGGA+AGG | + | chr6.3:52054025-52054044 | None:intergenic | 35.0% | |
| GCTTAGAATTAGATATGCAG+AGG | + | chr6.3:52053579-52053598 | None:intergenic | 35.0% | |
| GTCCAATATAATGTTTGTGC+AGG | - | chr6.3:52053958-52053977 | MS.gene83655:CDS | 35.0% | |
| TAAACTCTTAGACAGGGTTA+TGG | - | chr6.3:52053237-52053256 | MS.gene83655:intron | 35.0% | |
| TCAACCTAAACTCTTAGACA+GGG | - | chr6.3:52053231-52053250 | MS.gene83655:intron | 35.0% | |
| TGCAAAAGAGCTTACCTTTA+GGG | + | chr6.3:52053839-52053858 | None:intergenic | 35.0% | |
| TTCAACCTAAACTCTTAGAC+AGG | - | chr6.3:52053230-52053249 | MS.gene83655:intron | 35.0% | |
| ! | GCAGAGGAATTTTGTATTGT+GGG | + | chr6.3:52053563-52053582 | None:intergenic | 35.0% |
| ! | TCCAAGTTCCCTACATTTTA+TGG | - | chr6.3:52053420-52053439 | MS.gene83655:CDS | 35.0% |
| ! | TGCAGAGGAATTTTGTATTG+TGG | + | chr6.3:52053564-52053583 | None:intergenic | 35.0% |
| !! | AAGCTTTCTAGTTTGACCAT+AGG | - | chr6.3:52053595-52053614 | MS.gene83655:CDS | 35.0% |
| AAAATCTTCACTTGCCGAAC+AGG | - | chr6.3:52054123-52054142 | MS.gene83655:CDS | 40.0% | |
| AAAGATTGCACGTAGAGACT+TGG | + | chr6.3:52053699-52053718 | None:intergenic | 40.0% | |
| AAATCTTCACTTGCCGAACA+GGG | - | chr6.3:52054124-52054143 | MS.gene83655:CDS | 40.0% | |
| AGTTCTCTTACTCTCTTTCG+TGG | - | chr6.3:52053664-52053683 | MS.gene83655:CDS | 40.0% | |
| CAAACTGGCTAAATTGAGGA+AGG | + | chr6.3:52053138-52053157 | None:intergenic | 40.0% | |
| GACACAAACTGGCTAAATTG+AGG | + | chr6.3:52053142-52053161 | None:intergenic | 40.0% | |
| GATGGGCATGAAAATATGCA+AGG | + | chr6.3:52053349-52053368 | None:intergenic | 40.0% | |
| GCCATAAAATGTAGGGAACT+TGG | + | chr6.3:52053424-52053443 | None:intergenic | 40.0% | |
| GCGTGCCTTAAATCAATATC+AGG | + | chr6.3:52053202-52053221 | None:intergenic | 40.0% | |
| GCTAAATTGAGGAAGGTTCT+GGG | + | chr6.3:52053131-52053150 | None:intergenic | 40.0% | |
| TCTCTCTTCAACTACCCTAA+AGG | - | chr6.3:52053822-52053841 | MS.gene83655:CDS | 40.0% | |
| TTGACCATAGGCACAATTCT+AGG | - | chr6.3:52053607-52053626 | MS.gene83655:CDS | 40.0% | |
| TTGGAAGTTCTATCATCCGA+GGG | + | chr6.3:52053405-52053424 | None:intergenic | 40.0% | |
| TTGTCACATGTTGACCACTT+TGG | - | chr6.3:52053516-52053535 | MS.gene83655:CDS | 40.0% | |
| ! | GGAGTAGAAAGCACAACTTT+GGG | + | chr6.3:52053637-52053656 | None:intergenic | 40.0% |
| ! | TTTGCATTTTGTCTGTCCCT+CGG | - | chr6.3:52053386-52053405 | MS.gene83655:CDS | 40.0% |
| !! | GATATTGATTTAAGGCACGC+TGG | - | chr6.3:52053202-52053221 | MS.gene83655:intron | 40.0% |
| AGCTCCTAGAATTGTGCCTA+TGG | + | chr6.3:52053614-52053633 | None:intergenic | 45.0% | |
| ATGTTGACCACTTTGGTCCT+TGG | - | chr6.3:52053523-52053542 | MS.gene83655:CDS | 45.0% | |
| CTACTAGATGGAAGGACCTT+TGG | - | chr6.3:52053065-52053084 | MS.gene83655:CDS | 45.0% | |
| CTTGGAAGTTCTATCATCCG+AGG | + | chr6.3:52053406-52053425 | None:intergenic | 45.0% | |
| GGCTAAATTGAGGAAGGTTC+TGG | + | chr6.3:52053132-52053151 | None:intergenic | 45.0% | |
| ! | ATTGATTTAAGGCACGCTGG+TGG | - | chr6.3:52053205-52053224 | MS.gene83655:intron | 45.0% |
| ! | CGGAGTAGAAAGCACAACTT+TGG | + | chr6.3:52053638-52053657 | None:intergenic | 45.0% |
| GACTATGGAGACATCGCCAA+AGG | + | chr6.3:52053084-52053103 | None:intergenic | 50.0% | |
| ! | GGGTTAGTATACACCAGCCA+AGG | + | chr6.3:52053543-52053562 | None:intergenic | 50.0% |
| ACACCAGCCAAGGACCAAAG+TGG | + | chr6.3:52053533-52053552 | None:intergenic | 55.0% | |
| TGACCACTTTGGTCCTTGGC+TGG | - | chr6.3:52053527-52053546 | MS.gene83655:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 52052944 | 52054171 | 52052944 | ID=MS.gene83655 |
| chr6.3 | mRNA | 52052944 | 52054171 | 52052944 | ID=MS.gene83655.t1;Parent=MS.gene83655 |
| chr6.3 | exon | 52053272 | 52054171 | 52053272 | ID=MS.gene83655.t1.exon1;Parent=MS.gene83655.t1 |
| chr6.3 | CDS | 52053272 | 52054171 | 52053272 | ID=cds.MS.gene83655.t1;Parent=MS.gene83655.t1 |
| chr6.3 | exon | 52052944 | 52053135 | 52052944 | ID=MS.gene83655.t1.exon2;Parent=MS.gene83655.t1 |
| chr6.3 | CDS | 52052944 | 52053135 | 52052944 | ID=cds.MS.gene83655.t1;Parent=MS.gene83655.t1 |
| Gene Sequence |
| Protein sequence |
