Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83712.t1 | XP_024642001.1 | 96.7 | 306 | 10 | 0 | 1 | 306 | 84 | 389 | 8.20E-167 | 596.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83712.t1 | P17094 | 84.9 | 304 | 46 | 0 | 1 | 304 | 84 | 387 | 3.2e-151 | 535.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83712.t1 | G7IBY1 | 96.7 | 306 | 10 | 0 | 1 | 306 | 84 | 389 | 5.9e-167 | 596.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051781 | MS.gene83712 | 0.803322 | 3.69E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83712.t1 | MTR_1g098540 | 96.732 | 306 | 10 | 0 | 1 | 306 | 84 | 389 | 0.0 | 608 |
MS.gene83712.t1 | MTR_4g094398 | 87.162 | 296 | 38 | 0 | 11 | 306 | 94 | 389 | 0.0 | 548 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 11 | 304 | 0.0 | 533 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G43170 | 84.694 | 294 | 45 | 0 | 11 | 304 | 94 | 387 | 0.0 | 531 |
MS.gene83712.t1 | AT1G61580 | 81.229 | 293 | 55 | 0 | 11 | 303 | 94 | 386 | 0.0 | 514 |
Find 89 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAACTTGAATCTCCATGATA+TGG | 0.252209 | 4.3:-62310825 | None:intergenic |
TGTCAATCATTTCATCCTTC+TGG | 0.271486 | 4.3:-62310924 | None:intergenic |
ATCGATACCTCTTCCAAGTT+TGG | 0.285033 | 4.3:+62311375 | MS.gene83712:CDS |
CACTCAGATCAGGAAAATAA+AGG | 0.314110 | 4.3:+62310783 | MS.gene83712:CDS |
TCAGAGAAGCAAAAGTTCTA+TGG | 0.364679 | 4.3:+62311420 | MS.gene83712:CDS |
ACTTCTTCAGTTTCTCAAGC+TGG | 0.375617 | 4.3:-62310732 | None:intergenic |
CAGAGTAATAACCCTCTTCT+TGG | 0.375680 | 4.3:-62311292 | None:intergenic |
TTTGCTTCTCTGATGTTGTC+TGG | 0.376238 | 4.3:-62311410 | None:intergenic |
CTTCTTCAGTTTCTCAAGCT+GGG | 0.407032 | 4.3:-62310731 | None:intergenic |
TTGAGGAAGGTTGCATGTAT+TGG | 0.407927 | 4.3:+62311033 | MS.gene83712:CDS |
TCTTTCACTGTTGCAAGAGC+TGG | 0.422143 | 4.3:+62311078 | MS.gene83712:CDS |
ATTTACAAGCTCGGCAAAGT+TGG | 0.433680 | 4.3:+62311141 | MS.gene83712:CDS |
AACTTGAATCTCCATGATAT+GGG | 0.434515 | 4.3:-62310824 | None:intergenic |
CGGTGGTACCATCGCACAAA+AGG | 0.436177 | 4.3:+62310849 | MS.gene83712:CDS |
ATGAAGGTGTTGTTACTCGT+TGG | 0.437276 | 4.3:+62310974 | MS.gene83712:CDS |
ATGGTTGTTGTCGGTGTTGT+GGG | 0.440477 | 4.3:+62310538 | MS.gene83712:CDS |
CATTGGAGTGACCAAGGGTA+AGG | 0.441876 | 4.3:+62310948 | MS.gene83712:CDS |
GAAACGACCATGTCCAAACT+TGG | 0.447320 | 4.3:-62311388 | None:intergenic |
TCCGAGCATTGAACACTGTC+TGG | 0.449897 | 4.3:+62310584 | MS.gene83712:CDS |
TGAAGGTGTTGTTACTCGTT+GGG | 0.451002 | 4.3:+62310975 | MS.gene83712:CDS |
ATACAGTTTCTTTGAGAAGC+AGG | 0.454598 | 4.3:+62310882 | MS.gene83712:CDS |
GTCTTCCTCGTAAGACTCAC+AGG | 0.464950 | 4.3:+62311007 | MS.gene83712:CDS |
TGAGAAAGACATTACACCTA+TGG | 0.467448 | 4.3:+62311203 | MS.gene83712:CDS |
GTAAGACTCACAGGGGTTTG+AGG | 0.468820 | 4.3:+62311016 | MS.gene83712:CDS |
ACTACCATAATTAAGCTTTG+AGG | 0.473296 | 4.3:-62311446 | None:intergenic |
GATGAAATGATTGACATCAT+TGG | 0.474891 | 4.3:+62310931 | MS.gene83712:CDS |
GACTTCTCGTCTTGCTCTTG+AGG | 0.480840 | 4.3:+62311335 | MS.gene83712:CDS |
ACTCAGATCAGGAAAATAAA+GGG | 0.481042 | 4.3:+62310784 | MS.gene83712:CDS |
TATGGTTGTTGTCGGTGTTG+TGG | 0.481177 | 4.3:+62310537 | None:intergenic |
TGTTGGCTCACACTCAGATC+AGG | 0.484616 | 4.3:+62310773 | MS.gene83712:CDS |
TGTTCAGCTCAGTTCTGTGA+TGG | 0.485951 | 4.3:-62311113 | None:intergenic |
AACAAGAAAATTTACAAGCT+CGG | 0.491496 | 4.3:+62311132 | MS.gene83712:CDS |
AGAGTAATAACCCTCTTCTT+GGG | 0.492275 | 4.3:-62311291 | None:intergenic |
ATCATGGAGATTCAAGTTAA+CGG | 0.493946 | 4.3:+62310829 | MS.gene83712:CDS |
GACGAGAAGTCTGCTTAAGA+AGG | 0.502167 | 4.3:-62311323 | None:intergenic |
ACCCCTCCTATGGTTGTTGT+CGG | 0.504742 | 4.3:+62310529 | None:intergenic |
TCCAGACAGTGTTCAATGCT+CGG | 0.511527 | 4.3:-62310585 | None:intergenic |
ACCTTCATAACCCTTACCCT+TGG | 0.517932 | 4.3:-62310959 | None:intergenic |
GTTCAATGCTCGGAGACCAC+GGG | 0.522397 | 4.3:-62310575 | None:intergenic |
ATGATCAAGGGAGGCTGTGT+TGG | 0.526401 | 4.3:+62311267 | MS.gene83712:CDS |
GCAGAAGAAAGCCCATATCA+TGG | 0.526839 | 4.3:+62310813 | MS.gene83712:CDS |
ACCAAGGGTAAGGGTTATGA+AGG | 0.530593 | 4.3:+62310958 | MS.gene83712:CDS |
CGAACTCAGTCTGAGCGCCA+TGG | 0.544176 | 4.3:-62311173 | None:intergenic |
AAGCAGTATAAAAGTGATGA+GGG | 0.545940 | 4.3:+62310691 | MS.gene83712:CDS |
TATACTGCTTTGAGTAATTG+CGG | 0.553884 | 4.3:-62310678 | None:intergenic |
TGCAACTGTTATTCGTGTGT+TGG | 0.555709 | 4.3:+62310756 | MS.gene83712:CDS |
TGTTCAATGCTCGGAGACCA+CGG | 0.555852 | 4.3:-62310576 | None:intergenic |
GACTCACAGGGGTTTGAGGA+AGG | 0.568790 | 4.3:+62311020 | MS.gene83712:CDS |
AAAGCAGTATAAAAGTGATG+AGG | 0.570008 | 4.3:+62310690 | MS.gene83712:CDS |
GAACTCAGTCTGAGCGCCAT+GGG | 0.574470 | 4.3:-62311172 | None:intergenic |
AAGTCTGCTTAAGAAGGGAC+TGG | 0.577488 | 4.3:-62311317 | None:intergenic |
ACCTCTTCCAAGTTTGGACA+TGG | 0.582976 | 4.3:+62311381 | MS.gene83712:CDS |
GCGCTCAGACTGAGTTCGAT+AGG | 0.584674 | 4.3:+62311178 | MS.gene83712:CDS |
TCTTCCTCGTAAGACTCACA+GGG | 0.584859 | 4.3:+62311008 | MS.gene83712:CDS |
ACAACACCGACAACAACCAT+AGG | 0.591726 | 4.3:-62310535 | None:intergenic |
ATTGGAGTGACCAAGGGTAA+GGG | 0.593223 | 4.3:+62310949 | MS.gene83712:CDS |
TGGTACCATCGCACAAAAGG+TGG | 0.595863 | 4.3:+62310852 | MS.gene83712:CDS |
GAGAAAGACATTACACCTAT+GGG | 0.596080 | 4.3:+62311204 | MS.gene83712:CDS |
TGACATCATTGGAGTGACCA+AGG | 0.598559 | 4.3:+62310942 | MS.gene83712:CDS |
AGGTTGCATGTATTGGTGCT+TGG | 0.600568 | 4.3:+62311040 | MS.gene83712:CDS |
ACCATGTCCAAACTTGGAAG+AGG | 0.600841 | 4.3:-62311382 | None:intergenic |
ACAGTGAAAGAAACTCTAGC+AGG | 0.607261 | 4.3:-62311066 | None:intergenic |
ATGGGTGGTTTCCCACACTA+CGG | 0.607609 | 4.3:+62311222 | MS.gene83712:CDS |
CTGTGTTGGTCCCAAGAAGA+GGG | 0.610053 | 4.3:+62311281 | MS.gene83712:CDS |
TATCGATGCTGTGTTCCAGA+AGG | 0.612569 | 4.3:+62310909 | MS.gene83712:CDS |
ACGAGAAGTCTGCTTAAGAA+GGG | 0.612938 | 4.3:-62311322 | None:intergenic |
GCTGTGTTGGTCCCAAGAAG+AGG | 0.613945 | 4.3:+62311280 | MS.gene83712:CDS |
CCTTGACAATACCGTAGTGT+GGG | 0.616873 | 4.3:-62311233 | None:intergenic |
GTTGCAAGAGCTGGTCAGAA+CGG | 0.617265 | 4.3:+62311087 | MS.gene83712:CDS |
CTGGTGCAAGTCCATGCAGA+AGG | 0.618228 | 4.3:+62310651 | MS.gene83712:CDS |
CAAGCTCGGCAAAGTTGGAG+AGG | 0.619055 | 4.3:+62311146 | MS.gene83712:CDS |
CCCACACTACGGTATTGTCA+AGG | 0.620478 | 4.3:+62311233 | MS.gene83712:CDS |
GAAGGTGTTGTTACTCGTTG+GGG | 0.623077 | 4.3:+62310976 | MS.gene83712:CDS |
TTCTGGAACACAGCATCGAT+AGG | 0.625976 | 4.3:-62310907 | None:intergenic |
TAGTGTGGGAAACCACCCAT+AGG | 0.626093 | 4.3:-62311219 | None:intergenic |
GACATCATTGGAGTGACCAA+GGG | 0.628824 | 4.3:+62310943 | MS.gene83712:CDS |
ATTGCGGAAAGCCTTCTGCA+TGG | 0.629972 | 4.3:-62310662 | None:intergenic |
AAAGTTGGAGAGGAGACCCA+TGG | 0.636220 | 4.3:+62311156 | MS.gene83712:CDS |
TCCTTGACAATACCGTAGTG+TGG | 0.648748 | 4.3:-62311234 | None:intergenic |
AAAGACATTACACCTATGGG+TGG | 0.665025 | 4.3:+62311207 | MS.gene83712:CDS |
CTGGACTCAGCATTTAAGCG+AGG | 0.671826 | 4.3:+62310603 | MS.gene83712:CDS |
AAACCCCTGTGAGTCTTACG+AGG | 0.675290 | 4.3:-62311012 | None:intergenic |
TAAGCGAGGAAATTAAGCGT+CGG | 0.681183 | 4.3:+62310617 | MS.gene83712:CDS |
GGCTATGTGAAAACTCCCCG+TGG | 0.687655 | 4.3:+62310559 | MS.gene83712:CDS |
AGCAGTATAAAAGTGATGAG+GGG | 0.688880 | 4.3:+62310692 | MS.gene83712:CDS |
TTCAATGCTCGGAGACCACG+GGG | 0.689564 | 4.3:-62310574 | None:intergenic |
ACACTACGGTATTGTCAAGG+AGG | 0.722752 | 4.3:+62311236 | MS.gene83712:CDS |
ATGGAGATTCAAGTTAACGG+TGG | 0.740732 | 4.3:+62310832 | MS.gene83712:CDS |
CTTCCTCGTAAGACTCACAG+GGG | 0.755519 | 4.3:+62311009 | MS.gene83712:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AACAAGAAAATTTACAAGCT+CGG | + | chr4.3:62311132-62311151 | MS.gene83712:CDS | 25.0% |
AAAGCAGTATAAAAGTGATG+AGG | + | chr4.3:62310690-62310709 | MS.gene83712:CDS | 30.0% | |
AACTTGAATCTCCATGATAT+GGG | - | chr4.3:62310827-62310846 | None:intergenic | 30.0% | |
AAGCAGTATAAAAGTGATGA+GGG | + | chr4.3:62310691-62310710 | MS.gene83712:CDS | 30.0% | |
ACTCAGATCAGGAAAATAAA+GGG | + | chr4.3:62310784-62310803 | MS.gene83712:CDS | 30.0% | |
GATGAAATGATTGACATCAT+TGG | + | chr4.3:62310931-62310950 | MS.gene83712:CDS | 30.0% | |
TAACTTGAATCTCCATGATA+TGG | - | chr4.3:62310828-62310847 | None:intergenic | 30.0% | |
! | ATCATGGAGATTCAAGTTAA+CGG | + | chr4.3:62310829-62310848 | MS.gene83712:CDS | 30.0% |
! | TATACTGCTTTGAGTAATTG+CGG | - | chr4.3:62310681-62310700 | None:intergenic | 30.0% |
AGAGTAATAACCCTCTTCTT+GGG | - | chr4.3:62311294-62311313 | None:intergenic | 35.0% | |
AGCAGTATAAAAGTGATGAG+GGG | + | chr4.3:62310692-62310711 | MS.gene83712:CDS | 35.0% | |
CACTCAGATCAGGAAAATAA+AGG | + | chr4.3:62310783-62310802 | MS.gene83712:CDS | 35.0% | |
GAGAAAGACATTACACCTAT+GGG | + | chr4.3:62311204-62311223 | MS.gene83712:CDS | 35.0% | |
TCAGAGAAGCAAAAGTTCTA+TGG | + | chr4.3:62311420-62311439 | MS.gene83712:CDS | 35.0% | |
TGAGAAAGACATTACACCTA+TGG | + | chr4.3:62311203-62311222 | MS.gene83712:CDS | 35.0% | |
TGTCAATCATTTCATCCTTC+TGG | - | chr4.3:62310927-62310946 | None:intergenic | 35.0% | |
! | ATACAGTTTCTTTGAGAAGC+AGG | + | chr4.3:62310882-62310901 | MS.gene83712:CDS | 35.0% |
! | GAGGATTTTCTGATGATCAA+GGG | + | chr4.3:62311255-62311274 | MS.gene83712:CDS | 35.0% |
!!! | AATTAAGCGTCGGTTTTACA+CGG | + | chr4.3:62310627-62310646 | MS.gene83712:CDS | 35.0% |
AAAGACATTACACCTATGGG+TGG | + | chr4.3:62311207-62311226 | MS.gene83712:CDS | 40.0% | |
ACAGTGAAAGAAACTCTAGC+AGG | - | chr4.3:62311069-62311088 | None:intergenic | 40.0% | |
ACGAGAAGTCTGCTTAAGAA+GGG | - | chr4.3:62311325-62311344 | None:intergenic | 40.0% | |
ACTTCTTCAGTTTCTCAAGC+TGG | - | chr4.3:62310735-62310754 | None:intergenic | 40.0% | |
ATCGATACCTCTTCCAAGTT+TGG | + | chr4.3:62311375-62311394 | MS.gene83712:CDS | 40.0% | |
ATTTACAAGCTCGGCAAAGT+TGG | + | chr4.3:62311141-62311160 | MS.gene83712:CDS | 40.0% | |
CAGAGTAATAACCCTCTTCT+TGG | - | chr4.3:62311295-62311314 | None:intergenic | 40.0% | |
CTTCTTCAGTTTCTCAAGCT+GGG | - | chr4.3:62310734-62310753 | None:intergenic | 40.0% | |
TAAGCGAGGAAATTAAGCGT+CGG | + | chr4.3:62310617-62310636 | MS.gene83712:CDS | 40.0% | |
TGCAACTGTTATTCGTGTGT+TGG | + | chr4.3:62310756-62310775 | MS.gene83712:CDS | 40.0% | |
TTGAGGAAGGTTGCATGTAT+TGG | + | chr4.3:62311033-62311052 | MS.gene83712:CDS | 40.0% | |
TTTGCTTCTCTGATGTTGTC+TGG | - | chr4.3:62311413-62311432 | None:intergenic | 40.0% | |
! | ATGGAGATTCAAGTTAACGG+TGG | + | chr4.3:62310832-62310851 | MS.gene83712:CDS | 40.0% |
! | GATTTTCTGATGATCAAGGG+AGG | + | chr4.3:62311258-62311277 | MS.gene83712:CDS | 40.0% |
! | GGAGGATTTTCTGATGATCA+AGG | + | chr4.3:62311254-62311273 | MS.gene83712:CDS | 40.0% |
!! | ATGAAGGTGTTGTTACTCGT+TGG | + | chr4.3:62310974-62310993 | MS.gene83712:CDS | 40.0% |
!! | TGAAGGTGTTGTTACTCGTT+GGG | + | chr4.3:62310975-62310994 | MS.gene83712:CDS | 40.0% |
AAGTCTGCTTAAGAAGGGAC+TGG | - | chr4.3:62311320-62311339 | None:intergenic | 45.0% | |
ACACTACGGTATTGTCAAGG+AGG | + | chr4.3:62311236-62311255 | MS.gene83712:CDS | 45.0% | |
ACCAAGGGTAAGGGTTATGA+AGG | + | chr4.3:62310958-62310977 | MS.gene83712:CDS | 45.0% | |
ACCATGTCCAAACTTGGAAG+AGG | - | chr4.3:62311385-62311404 | None:intergenic | 45.0% | |
ACCTCTTCCAAGTTTGGACA+TGG | + | chr4.3:62311381-62311400 | MS.gene83712:CDS | 45.0% | |
ACCTTCATAACCCTTACCCT+TGG | - | chr4.3:62310962-62310981 | None:intergenic | 45.0% | |
ATTGGAGTGACCAAGGGTAA+GGG | + | chr4.3:62310949-62310968 | MS.gene83712:CDS | 45.0% | |
CCTTGACAATACCGTAGTGT+GGG | - | chr4.3:62311236-62311255 | None:intergenic | 45.0% | |
GAAACGACCATGTCCAAACT+TGG | - | chr4.3:62311391-62311410 | None:intergenic | 45.0% | |
GACATCATTGGAGTGACCAA+GGG | + | chr4.3:62310943-62310962 | MS.gene83712:CDS | 45.0% | |
GACGAGAAGTCTGCTTAAGA+AGG | - | chr4.3:62311326-62311345 | None:intergenic | 45.0% | |
GCAGAAGAAAGCCCATATCA+TGG | + | chr4.3:62310813-62310832 | MS.gene83712:CDS | 45.0% | |
TATCGATGCTGTGTTCCAGA+AGG | + | chr4.3:62310909-62310928 | MS.gene83712:CDS | 45.0% | |
TCCAGACAGTGTTCAATGCT+CGG | - | chr4.3:62310588-62310607 | None:intergenic | 45.0% | |
TCCTTGACAATACCGTAGTG+TGG | - | chr4.3:62311237-62311256 | None:intergenic | 45.0% | |
TCTTCCTCGTAAGACTCACA+GGG | + | chr4.3:62311008-62311027 | MS.gene83712:CDS | 45.0% | |
TCTTTCACTGTTGCAAGAGC+TGG | + | chr4.3:62311078-62311097 | MS.gene83712:CDS | 45.0% | |
TGACATCATTGGAGTGACCA+AGG | + | chr4.3:62310942-62310961 | MS.gene83712:CDS | 45.0% | |
TGTTCAGCTCAGTTCTGTGA+TGG | - | chr4.3:62311116-62311135 | None:intergenic | 45.0% | |
! | AAAGTCCACCTTTTGTGCGA+TGG | - | chr4.3:62310860-62310879 | None:intergenic | 45.0% |
! | AGGTTGCATGTATTGGTGCT+TGG | + | chr4.3:62311040-62311059 | MS.gene83712:CDS | 45.0% |
!! | ATGGTTGTTGTCGGTGTTGT+GGG | + | chr4.3:62310538-62310557 | MS.gene83712:CDS | 45.0% |
!! | GAAGGTGTTGTTACTCGTTG+GGG | + | chr4.3:62310976-62310995 | MS.gene83712:CDS | 45.0% |
!! | TTCTGGAACACAGCATCGAT+AGG | - | chr4.3:62310910-62310929 | None:intergenic | 45.0% |
AAACCCCTGTGAGTCTTACG+AGG | - | chr4.3:62311015-62311034 | None:intergenic | 50.0% | |
AAAGTTGGAGAGGAGACCCA+TGG | + | chr4.3:62311156-62311175 | MS.gene83712:CDS | 50.0% | |
ATGATCAAGGGAGGCTGTGT+TGG | + | chr4.3:62311267-62311286 | MS.gene83712:CDS | 50.0% | |
ATGGGTGGTTTCCCACACTA+CGG | + | chr4.3:62311222-62311241 | MS.gene83712:CDS | 50.0% | |
ATTGCGGAAAGCCTTCTGCA+TGG | - | chr4.3:62310665-62310684 | None:intergenic | 50.0% | |
CATTGGAGTGACCAAGGGTA+AGG | + | chr4.3:62310948-62310967 | MS.gene83712:CDS | 50.0% | |
CCCACACTACGGTATTGTCA+AGG | + | chr4.3:62311233-62311252 | MS.gene83712:CDS | 50.0% | |
CTGGACTCAGCATTTAAGCG+AGG | + | chr4.3:62310603-62310622 | MS.gene83712:CDS | 50.0% | |
CTTCCTCGTAAGACTCACAG+GGG | + | chr4.3:62311009-62311028 | MS.gene83712:CDS | 50.0% | |
GACTTCTCGTCTTGCTCTTG+AGG | + | chr4.3:62311335-62311354 | MS.gene83712:CDS | 50.0% | |
GTAAGACTCACAGGGGTTTG+AGG | + | chr4.3:62311016-62311035 | MS.gene83712:CDS | 50.0% | |
GTCTTCCTCGTAAGACTCAC+AGG | + | chr4.3:62311007-62311026 | MS.gene83712:CDS | 50.0% | |
GTTGCAAGAGCTGGTCAGAA+CGG | + | chr4.3:62311087-62311106 | MS.gene83712:CDS | 50.0% | |
TAGTGTGGGAAACCACCCAT+AGG | - | chr4.3:62311222-62311241 | None:intergenic | 50.0% | |
TGGTACCATCGCACAAAAGG+TGG | + | chr4.3:62310852-62310871 | MS.gene83712:CDS | 50.0% | |
TGTTCAATGCTCGGAGACCA+CGG | - | chr4.3:62310579-62310598 | None:intergenic | 50.0% | |
! | CTGTGTTGGTCCCAAGAAGA+GGG | + | chr4.3:62311281-62311300 | MS.gene83712:CDS | 50.0% |
!! | TCCGAGCATTGAACACTGTC+TGG | + | chr4.3:62310584-62310603 | MS.gene83712:CDS | 50.0% |
!! | TGTTGGCTCACACTCAGATC+AGG | + | chr4.3:62310773-62310792 | MS.gene83712:CDS | 50.0% |
CAAGCTCGGCAAAGTTGGAG+AGG | + | chr4.3:62311146-62311165 | MS.gene83712:CDS | 55.0% | |
CGGTGGTACCATCGCACAAA+AGG | + | chr4.3:62310849-62310868 | MS.gene83712:CDS | 55.0% | |
CTGGTGCAAGTCCATGCAGA+AGG | + | chr4.3:62310651-62310670 | MS.gene83712:CDS | 55.0% | |
GAACTCAGTCTGAGCGCCAT+GGG | - | chr4.3:62311175-62311194 | None:intergenic | 55.0% | |
GACTCACAGGGGTTTGAGGA+AGG | + | chr4.3:62311020-62311039 | MS.gene83712:CDS | 55.0% | |
GCGCTCAGACTGAGTTCGAT+AGG | + | chr4.3:62311178-62311197 | MS.gene83712:CDS | 55.0% | |
GGCTATGTGAAAACTCCCCG+TGG | + | chr4.3:62310559-62310578 | MS.gene83712:CDS | 55.0% | |
GTTCAATGCTCGGAGACCAC+GGG | - | chr4.3:62310578-62310597 | None:intergenic | 55.0% | |
TTCAATGCTCGGAGACCACG+GGG | - | chr4.3:62310577-62310596 | None:intergenic | 55.0% | |
! | GCTGTGTTGGTCCCAAGAAG+AGG | + | chr4.3:62311280-62311299 | MS.gene83712:CDS | 55.0% |
!!! | AGCGTCGGTTTTACACGGAC+TGG | + | chr4.3:62310632-62310651 | MS.gene83712:CDS | 55.0% |
CGAACTCAGTCTGAGCGCCA+TGG | - | chr4.3:62311176-62311195 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 62310538 | 62311458 | 62310538 | ID=MS.gene83712 |
chr4.3 | mRNA | 62310538 | 62311458 | 62310538 | ID=MS.gene83712.t1;Parent=MS.gene83712 |
chr4.3 | exon | 62310538 | 62311458 | 62310538 | ID=MS.gene83712.t1.exon1;Parent=MS.gene83712.t1 |
chr4.3 | CDS | 62310538 | 62311458 | 62310538 | ID=cds.MS.gene83712.t1;Parent=MS.gene83712.t1 |
Gene Sequence |
Protein sequence |