Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83740.t1 | XP_024634179.1 | 47.5 | 648 | 132 | 8 | 3 | 451 | 1147 | 1785 | 4.30E-108 | 401.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83740.t1 | A0A072UY19 | 44.6 | 598 | 180 | 9 | 1 | 451 | 1275 | 1868 | 8.8e-103 | 383.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051544 | MS.gene83740 | 0.804669 | 1.93E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene83740.t1 | MTR_3g062980 | 48.080 | 547 | 159 | 13 | 1 | 451 | 181 | 698 | 2.45e-132 | 397 |
MS.gene83740.t1 | MTR_3g062980 | 51.701 | 147 | 43 | 4 | 1 | 129 | 69 | 205 | 1.67e-32 | 130 |
MS.gene83740.t1 | MTR_3g062130 | 52.135 | 445 | 111 | 8 | 89 | 451 | 1 | 425 | 5.42e-128 | 377 |
MS.gene83740.t1 | MTR_3g063010 | 48.746 | 558 | 150 | 16 | 1 | 451 | 1274 | 1802 | 1.80e-127 | 406 |
MS.gene83740.t1 | MTR_2g023000 | 50.905 | 442 | 121 | 11 | 24 | 401 | 1 | 410 | 1.84e-115 | 345 |
MS.gene83740.t1 | MTR_3g027360 | 73.391 | 233 | 34 | 1 | 190 | 394 | 46 | 278 | 9.70e-112 | 330 |
MS.gene83740.t1 | MTR_3g464840 | 44.015 | 543 | 189 | 12 | 1 | 438 | 1183 | 1715 | 1.48e-109 | 355 |
MS.gene83740.t1 | MTR_3g062340 | 65.436 | 298 | 57 | 3 | 197 | 451 | 1655 | 1949 | 1.06e-106 | 347 |
MS.gene83740.t1 | MTR_3g062340 | 69.231 | 182 | 56 | 0 | 1 | 182 | 1183 | 1364 | 6.60e-71 | 244 |
MS.gene83740.t1 | MTR_3g062180 | 49.724 | 362 | 117 | 9 | 2 | 316 | 93 | 436 | 3.93e-89 | 284 |
MS.gene83740.t1 | MTR_3g062180 | 43.295 | 261 | 96 | 6 | 196 | 421 | 385 | 628 | 8.33e-46 | 168 |
MS.gene83740.t1 | MTR_3g062140 | 49.724 | 362 | 117 | 9 | 2 | 316 | 1211 | 1554 | 6.75e-84 | 282 |
MS.gene83740.t1 | MTR_3g062140 | 43.295 | 261 | 96 | 6 | 196 | 421 | 1503 | 1746 | 9.23e-45 | 168 |
MS.gene83740.t1 | MTR_3g451150 | 52.599 | 327 | 82 | 6 | 183 | 451 | 1568 | 1879 | 1.26e-82 | 278 |
MS.gene83740.t1 | MTR_3g451150 | 71.823 | 181 | 50 | 1 | 2 | 182 | 1254 | 1433 | 6.99e-74 | 253 |
MS.gene83740.t1 | MTR_3g452250 | 52.599 | 327 | 82 | 6 | 183 | 451 | 1568 | 1879 | 1.26e-82 | 278 |
MS.gene83740.t1 | MTR_3g452250 | 71.823 | 181 | 50 | 1 | 2 | 182 | 1254 | 1433 | 6.99e-74 | 253 |
MS.gene83740.t1 | MTR_3g466750 | 50.000 | 328 | 91 | 6 | 195 | 451 | 1543 | 1868 | 1.27e-78 | 266 |
MS.gene83740.t1 | MTR_3g466750 | 69.231 | 182 | 52 | 3 | 1 | 182 | 1275 | 1452 | 2.76e-69 | 239 |
MS.gene83740.t1 | MTR_3g062230 | 70.652 | 184 | 50 | 4 | 1 | 182 | 226 | 407 | 1.99e-75 | 249 |
MS.gene83740.t1 | MTR_0257s0040 | 71.856 | 167 | 39 | 1 | 2 | 168 | 24 | 182 | 7.20e-75 | 233 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 984 | 1162 | 8.91e-74 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 45.299 | 351 | 86 | 6 | 183 | 442 | 1281 | 1616 | 8.03e-70 | 241 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 1199 | 1377 | 9.17e-74 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 44.915 | 354 | 86 | 6 | 183 | 442 | 1496 | 1834 | 2.36e-69 | 239 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 1199 | 1377 | 9.25e-74 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 45.299 | 351 | 86 | 6 | 183 | 442 | 1496 | 1831 | 9.51e-70 | 241 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 982 | 1160 | 9.62e-74 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 45.299 | 351 | 86 | 6 | 183 | 442 | 1279 | 1614 | 8.42e-70 | 241 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 982 | 1160 | 1.18e-73 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 52.000 | 100 | 32 | 2 | 181 | 264 | 1277 | 1376 | 9.07e-18 | 87.0 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 984 | 1162 | 1.22e-73 | 252 |
MS.gene83740.t1 | MTR_3g435040 | 43.082 | 318 | 91 | 4 | 200 | 442 | 1253 | 1555 | 1.71e-61 | 217 |
MS.gene83740.t1 | MTR_3g435040 | 71.111 | 180 | 51 | 1 | 3 | 182 | 984 | 1162 | 1.92e-73 | 251 |
MS.gene83740.t1 | MTR_3g062320 | 75.294 | 170 | 41 | 1 | 1 | 169 | 1083 | 1252 | 1.22e-72 | 249 |
MS.gene83740.t1 | MTR_3g062320 | 48.097 | 289 | 95 | 7 | 197 | 451 | 1339 | 1606 | 1.49e-61 | 217 |
MS.gene83740.t1 | MTR_3g467660 | 71.605 | 162 | 45 | 1 | 2 | 163 | 142 | 302 | 1.71e-72 | 231 |
MS.gene83740.t1 | MTR_2g451270 | 55.251 | 219 | 86 | 3 | 245 | 451 | 33 | 251 | 4.68e-68 | 218 |
MS.gene83740.t1 | MTR_3g062050 | 70.414 | 169 | 50 | 0 | 1 | 169 | 207 | 375 | 8.58e-68 | 221 |
MS.gene83740.t1 | MTR_3g062420 | 60.000 | 215 | 81 | 1 | 3 | 217 | 1283 | 1492 | 1.12e-66 | 232 |
MS.gene83740.t1 | MTR_3g062420 | 47.368 | 247 | 71 | 6 | 237 | 449 | 1718 | 1939 | 8.89e-51 | 186 |
MS.gene83740.t1 | MTR_3g062420 | 41.558 | 154 | 63 | 4 | 190 | 316 | 1575 | 1728 | 2.83e-19 | 91.7 |
MS.gene83740.t1 | MTR_0922s0020 | 53.540 | 226 | 64 | 3 | 253 | 451 | 1 | 212 | 5.97e-65 | 208 |
MS.gene83740.t1 | MTR_0043s0080 | 41.477 | 352 | 115 | 7 | 15 | 288 | 2 | 340 | 6.70e-64 | 215 |
MS.gene83740.t1 | MTR_3g062090 | 65.405 | 185 | 53 | 2 | 1 | 182 | 1262 | 1438 | 7.70e-64 | 224 |
MS.gene83740.t1 | MTR_3g062090 | 65.405 | 185 | 53 | 2 | 1 | 182 | 1262 | 1438 | 1.30e-63 | 223 |
MS.gene83740.t1 | MTR_0043s0080 | 40.331 | 362 | 115 | 7 | 15 | 288 | 2 | 350 | 2.70e-62 | 211 |
MS.gene83740.t1 | MTR_3g436180 | 53.125 | 224 | 87 | 3 | 3 | 211 | 89 | 309 | 3.10e-62 | 205 |
MS.gene83740.t1 | MTR_3g062010 | 35.236 | 508 | 178 | 15 | 3 | 451 | 829 | 1244 | 3.06e-60 | 213 |
MS.gene83740.t1 | MTR_3g464810 | 43.072 | 332 | 117 | 11 | 1 | 267 | 1149 | 1473 | 5.18e-60 | 213 |
MS.gene83740.t1 | MTR_3g464810 | 45.221 | 272 | 93 | 6 | 193 | 412 | 1590 | 1857 | 2.85e-52 | 190 |
MS.gene83740.t1 | MTR_3g464810 | 34.109 | 129 | 73 | 3 | 1 | 125 | 817 | 937 | 3.63e-11 | 66.2 |
MS.gene83740.t1 | MTR_2g049960 | 48.583 | 247 | 87 | 4 | 245 | 451 | 77 | 323 | 7.82e-60 | 199 |
MS.gene83740.t1 | MTR_3g062400 | 43.894 | 303 | 91 | 6 | 214 | 451 | 4 | 292 | 7.97e-60 | 197 |
MS.gene83740.t1 | MTR_7g026240 | 56.684 | 187 | 72 | 3 | 2 | 181 | 39 | 223 | 7.88e-59 | 196 |
MS.gene83740.t1 | MTR_7g026240 | 53.383 | 133 | 51 | 3 | 319 | 451 | 211 | 332 | 7.11e-32 | 124 |
MS.gene83740.t1 | MTR_3g466530 | 44.186 | 301 | 131 | 8 | 3 | 289 | 204 | 481 | 8.98e-59 | 206 |
MS.gene83740.t1 | MTR_3g464950 | 45.000 | 320 | 102 | 9 | 193 | 451 | 1482 | 1788 | 3.51e-57 | 204 |
MS.gene83740.t1 | MTR_3g464950 | 43.913 | 230 | 101 | 10 | 1 | 212 | 1078 | 1297 | 4.49e-37 | 145 |
MS.gene83740.t1 | MTR_3g464950 | 35.115 | 131 | 67 | 3 | 2 | 125 | 818 | 937 | 1.14e-11 | 67.8 |
MS.gene83740.t1 | MTR_3g464870 | 44.728 | 313 | 106 | 8 | 195 | 451 | 1576 | 1877 | 7.41e-56 | 200 |
MS.gene83740.t1 | MTR_3g464870 | 52.459 | 183 | 76 | 3 | 1 | 176 | 1189 | 1367 | 9.91e-47 | 174 |
MS.gene83740.t1 | MTR_3g048593 | 49.583 | 240 | 87 | 6 | 3 | 215 | 60 | 292 | 1.24e-55 | 187 |
MS.gene83740.t1 | MTR_3g464920 | 43.087 | 311 | 104 | 9 | 193 | 451 | 1452 | 1741 | 9.79e-53 | 191 |
MS.gene83740.t1 | MTR_3g464920 | 44.248 | 226 | 103 | 8 | 1 | 215 | 1091 | 1304 | 2.67e-37 | 145 |
MS.gene83740.t1 | MTR_3g466590 | 60.959 | 146 | 56 | 1 | 17 | 161 | 2 | 147 | 5.25e-50 | 180 |
MS.gene83740.t1 | MTR_3g464870 | 52.459 | 183 | 76 | 3 | 1 | 176 | 1189 | 1367 | 1.10e-46 | 173 |
MS.gene83740.t1 | MTR_3g464820 | 54.491 | 167 | 63 | 6 | 1 | 163 | 23 | 180 | 2.05e-46 | 159 |
MS.gene83740.t1 | MTR_3g435040 | 54.444 | 180 | 39 | 2 | 3 | 182 | 982 | 1118 | 5.77e-46 | 171 |
MS.gene83740.t1 | MTR_3g435040 | 52.000 | 100 | 32 | 2 | 181 | 264 | 1235 | 1334 | 8.99e-18 | 87.0 |
MS.gene83740.t1 | MTR_3g466610 | 62.411 | 141 | 44 | 3 | 17 | 157 | 2 | 133 | 7.93e-44 | 163 |
MS.gene83740.t1 | MTR_3g063320 | 71.739 | 92 | 26 | 0 | 360 | 451 | 48 | 139 | 7.31e-37 | 132 |
MS.gene83740.t1 | MTR_3g466550 | 65.217 | 92 | 32 | 0 | 360 | 451 | 21 | 112 | 6.36e-35 | 126 |
MS.gene83740.t1 | MTR_2g450490 | 65.217 | 92 | 32 | 0 | 360 | 451 | 179 | 270 | 1.68e-33 | 127 |
MS.gene83740.t1 | MTR_2g450490 | 29.825 | 171 | 99 | 4 | 137 | 290 | 8 | 174 | 8.29e-11 | 62.8 |
MS.gene83740.t1 | MTR_2g450480 | 71.951 | 82 | 23 | 0 | 24 | 105 | 1 | 82 | 2.45e-28 | 118 |
MS.gene83740.t1 | MTR_3g062390 | 49.612 | 129 | 60 | 2 | 89 | 217 | 1 | 124 | 1.46e-24 | 100 |
MS.gene83740.t1 | MTR_1g031830 | 36.126 | 191 | 113 | 5 | 3 | 185 | 1221 | 1410 | 7.49e-24 | 105 |
MS.gene83740.t1 | MTR_5g085400 | 35.294 | 204 | 121 | 6 | 3 | 199 | 1361 | 1560 | 3.47e-22 | 100 |
MS.gene83740.t1 | MTR_3g069220 | 51.754 | 114 | 25 | 2 | 291 | 376 | 26 | 137 | 3.62e-22 | 92.8 |
MS.gene83740.t1 | MTR_1147s0010 | 40.244 | 164 | 61 | 3 | 297 | 439 | 13 | 160 | 3.42e-21 | 90.5 |
MS.gene83740.t1 | MTR_3g048690 | 29.189 | 370 | 124 | 10 | 24 | 356 | 987 | 1255 | 6.86e-20 | 93.6 |
MS.gene83740.t1 | MTR_3g055230 | 36.986 | 146 | 74 | 4 | 3 | 137 | 1070 | 1208 | 1.01e-17 | 86.7 |
MS.gene83740.t1 | MTR_3g055230 | 36.986 | 146 | 74 | 4 | 3 | 137 | 1070 | 1208 | 1.21e-17 | 86.3 |
MS.gene83740.t1 | MTR_3g055230 | 36.986 | 146 | 74 | 4 | 3 | 137 | 1070 | 1208 | 1.27e-17 | 86.3 |
MS.gene83740.t1 | MTR_3g055210 | 37.063 | 143 | 80 | 4 | 1 | 137 | 1005 | 1143 | 4.36e-17 | 84.7 |
MS.gene83740.t1 | MTR_3g031750 | 46.094 | 128 | 46 | 4 | 56 | 182 | 1420 | 1525 | 4.74e-17 | 84.7 |
MS.gene83740.t1 | MTR_8g464870 | 34.211 | 152 | 77 | 3 | 3 | 152 | 1064 | 1194 | 6.39e-17 | 84.3 |
MS.gene83740.t1 | MTR_3g053200 | 33.333 | 141 | 84 | 4 | 3 | 137 | 1063 | 1199 | 7.64e-13 | 71.2 |
MS.gene83740.t1 | MTR_5g092190 | 28.571 | 175 | 109 | 4 | 3 | 164 | 1103 | 1274 | 1.48e-12 | 70.5 |
MS.gene83740.t1 | MTR_3g466580 | 33.858 | 127 | 71 | 3 | 3 | 123 | 828 | 947 | 3.41e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 57 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACAGTCTCTGAAGCTATTT+TGG | 0.152194 | 3.2:-18529734 | MS.gene83740:CDS |
TCATGACAGCATCATCATTT+AGG | 0.152235 | 3.2:+18530590 | None:intergenic |
TGAAGGTTTAAGCTCTTATT+TGG | 0.216071 | 3.2:-18530197 | MS.gene83740:CDS |
CTTCCTTGGTTACACGCTTC+TGG | 0.219273 | 3.2:+18529821 | None:intergenic |
TGTCTTGGCATTAGCTGATA+TGG | 0.224747 | 3.2:+18531251 | None:intergenic |
CATGACAGCATCATCATTTA+GGG | 0.279059 | 3.2:+18530591 | None:intergenic |
AAATGCATTGGAAAAGCTAT+TGG | 0.283561 | 3.2:-18529848 | MS.gene83740:CDS |
TTACAAGATGTGCGCAAATT+TGG | 0.284160 | 3.2:-18529937 | MS.gene83740:CDS |
ATCAGTAGCTAAATGATTCT+TGG | 0.290113 | 3.2:+18530144 | None:intergenic |
CTCAGGAAGCTCTTTACATT+TGG | 0.297107 | 3.2:+18532522 | None:intergenic |
GAAAGTAAGCTCAAATATTC+AGG | 0.321479 | 3.2:-18530569 | MS.gene83740:CDS |
AATACAAGAGAGTCTTGATT+TGG | 0.341688 | 3.2:+18530513 | None:intergenic |
AGCTCTTTACATTTGGAGAT+TGG | 0.370504 | 3.2:+18532529 | None:intergenic |
TTCCTTGGTTACACGCTTCT+GGG | 0.371059 | 3.2:+18529822 | None:intergenic |
ATACCTTCAGAAGGCTTTGA+AGG | 0.406731 | 3.2:+18530478 | None:intergenic |
TAAAGAGCTTCCTGAGCTAC+AGG | 0.419017 | 3.2:-18532515 | MS.gene83740:CDS |
GAATTCCCTGGGCATGACTA+AGG | 0.419275 | 3.2:+18532380 | None:intergenic |
GCGCATTTCTTCAACTTCCT+TGG | 0.423320 | 3.2:+18529807 | None:intergenic |
CAGCTTGAAATTGAATTCCC+TGG | 0.430620 | 3.2:+18532368 | None:intergenic |
TAGACACGTTATTGTAGAAC+TGG | 0.455975 | 3.2:+18532720 | None:intergenic |
GCGTTCGTTAAAAGAATTGA+AGG | 0.458671 | 3.2:+18530085 | None:intergenic |
ATCATTAGACCCTGTAGCTC+AGG | 0.458790 | 3.2:+18532505 | None:intergenic |
TTTGGTTCAAATATTGGCTA+TGG | 0.460834 | 3.2:-18532268 | MS.gene83740:intron |
ACTAATATTTCTTCATCCAT+AGG | 0.466091 | 3.2:+18530538 | None:intergenic |
AAGATGTTGATGTTAAAATC+TGG | 0.466817 | 3.2:-18530743 | MS.gene83740:CDS |
GAACTCGAGGAAATATTTGT+TGG | 0.470102 | 3.2:-18532469 | MS.gene83740:CDS |
AGCTTGAAATTGAATTCCCT+GGG | 0.476590 | 3.2:+18532369 | None:intergenic |
CTCTTATTTGGTTGTCACAA+GGG | 0.477215 | 3.2:-18530185 | MS.gene83740:CDS |
TATTCAGGATGAGTTTCCTA+TGG | 0.491575 | 3.2:-18530554 | MS.gene83740:CDS |
TATGCTACAATCTTCTAAGC+AGG | 0.494700 | 3.2:-18531301 | MS.gene83740:CDS |
ACCAAGCCTTAGTCATGCCC+AGG | 0.500756 | 3.2:-18532386 | MS.gene83740:CDS |
AAACCTTCATCTATTTGAGA+AGG | 0.500886 | 3.2:+18530211 | None:intergenic |
GCTGCTTTAAGTGCCCCTCT+TGG | 0.505217 | 3.2:-18529670 | MS.gene83740:CDS |
GACCCTTCTCAAATAGATGA+AGG | 0.517593 | 3.2:-18530214 | MS.gene83740:CDS |
CCCTGGGCATGACTAAGGCT+TGG | 0.524601 | 3.2:+18532385 | None:intergenic |
AACCTTCATCTATTTGAGAA+GGG | 0.530596 | 3.2:+18530212 | None:intergenic |
AGTAACACTAATATTGATCA+AGG | 0.544327 | 3.2:-18530711 | MS.gene83740:intron |
AGATAGTCTAATAGCCAAGA+GGG | 0.546488 | 3.2:+18529656 | None:intergenic |
CGAAGATGATCATCGGAAAG+TGG | 0.546909 | 3.2:-18532446 | MS.gene83740:CDS |
TGTTGATGTTAAAATCTGGC+AGG | 0.560410 | 3.2:-18530739 | MS.gene83740:CDS |
GCTCTTATTTGGTTGTCACA+AGG | 0.564126 | 3.2:-18530186 | MS.gene83740:CDS |
TTTAACATCAACATCTTGAG+TGG | 0.573990 | 3.2:+18530749 | None:intergenic |
GGCTTTGAAGGAGACTGAGA+TGG | 0.576692 | 3.2:+18530490 | None:intergenic |
ATCGAGATACGTGTTGAAGA+AGG | 0.578887 | 3.2:-18531276 | MS.gene83740:CDS |
TTGTTGGCGAAGATGATCAT+CGG | 0.600571 | 3.2:-18532453 | MS.gene83740:CDS |
ATGCTACAATCTTCTAAGCA+GGG | 0.607553 | 3.2:-18531300 | MS.gene83740:CDS |
TAACACTTTAAATCGACATG+TGG | 0.613234 | 3.2:-18529776 | MS.gene83740:CDS |
TTCCCAGAAGCGTGTAACCA+AGG | 0.623541 | 3.2:-18529824 | MS.gene83740:CDS |
TCTCCTTCAAAGCCTTCTGA+AGG | 0.626307 | 3.2:-18530481 | MS.gene83740:intron |
AAGCGAAGCAGATGAACTCG+AGG | 0.628276 | 3.2:-18532482 | MS.gene83740:CDS |
GAATTGAAGGATGCTTAACA+AGG | 0.637134 | 3.2:+18530098 | None:intergenic |
CCAAGCCTTAGTCATGCCCA+GGG | 0.641903 | 3.2:-18532385 | MS.gene83740:CDS |
AAAGAGCTTCCTGAGCTACA+GGG | 0.645018 | 3.2:-18532514 | MS.gene83740:CDS |
TATAGGTTATGAATTGCGCA+AGG | 0.652446 | 3.2:-18531848 | MS.gene83740:intron |
AAGATAGTCTAATAGCCAAG+AGG | 0.657497 | 3.2:+18529655 | None:intergenic |
GATAGTCTAATAGCCAAGAG+GGG | 0.686239 | 3.2:+18529657 | None:intergenic |
ATTCTCATATCACGCAACTG+TGG | 0.694926 | 3.2:+18532697 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTATAGAAAAAGAAAAT+TGG | + | chr3.2:18531508-18531527 | None:intergenic | 10.0% |
!! | TTATTTAAAAAAAACACAAA+TGG | - | chr3.2:18531263-18531282 | MS.gene83740:CDS | 10.0% |
!!! | AAGTTTTTTTTTTTTTTTGA+AGG | - | chr3.2:18531559-18531578 | MS.gene83740:intron | 10.0% |
!! | ATTAACATCATTATATAGTT+GGG | + | chr3.2:18530539-18530558 | None:intergenic | 15.0% |
!! | TATTAACATCATTATATAGT+TGG | + | chr3.2:18530540-18530559 | None:intergenic | 15.0% |
!! | TCATGAATTCTTAATATTAT+AGG | + | chr3.2:18531599-18531618 | None:intergenic | 15.0% |
!! | TGATATAAAGAGAATATAAT+TGG | - | chr3.2:18531439-18531458 | MS.gene83740:intron | 15.0% |
!!! | AAAAAACAAAATTTTGAGTT+TGG | - | chr3.2:18532042-18532061 | MS.gene83740:intron | 15.0% |
!!! | AAATTTGTTATTCAATGAAT+TGG | - | chr3.2:18530452-18530471 | MS.gene83740:intron | 15.0% |
!!! | TACTTTAGGAAAAAATATAT+AGG | - | chr3.2:18531536-18531555 | MS.gene83740:intron | 15.0% |
!!! | TTCTTTTAAATGAATTTTGT+AGG | - | chr3.2:18531627-18531646 | MS.gene83740:intron | 15.0% |
!!! | TTTTGAGAAAATTTTAAATG+AGG | + | chr3.2:18532549-18532568 | None:intergenic | 15.0% |
!!! | TTTTTGAAATTTTTCTATGT+AGG | - | chr3.2:18531077-18531096 | MS.gene83740:intron | 15.0% |
!!! | TTTTTTTTATCGTTAATAGA+TGG | - | chr3.2:18531967-18531986 | MS.gene83740:intron | 15.0% |
!! | AATAAAAAAATACCTTCAGA+AGG | + | chr3.2:18531948-18531967 | None:intergenic | 20.0% |
!! | ATTTCCCTTAAAATTTGTAT+AGG | + | chr3.2:18530376-18530395 | None:intergenic | 20.0% |
!! | CAATTGTCTATATAATCAAA+TGG | + | chr3.2:18530292-18530311 | None:intergenic | 20.0% |
!! | TAATAAAGTAAGCTTACTTT+AGG | - | chr3.2:18531522-18531541 | MS.gene83740:intron | 20.0% |
!! | TGTTATAGACATAAAAATTG+AGG | + | chr3.2:18529799-18529818 | None:intergenic | 20.0% |
!! | TTAAATAATTACATACCATG+CGG | - | chr3.2:18530190-18530209 | MS.gene83740:CDS | 20.0% |
!!! | AAAATTTTCTCAAAATGCAT+TGG | - | chr3.2:18532554-18532573 | MS.gene83740:CDS | 20.0% |
!!! | AACCAAAAATATCATTTTTG+AGG | + | chr3.2:18530133-18530152 | None:intergenic | 20.0% |
!!! | AATACTACAAGTTTTAGATT+TGG | + | chr3.2:18529999-18530018 | None:intergenic | 20.0% |
!!! | GATATTTTTGGTTCAAATAT+TGG | - | chr3.2:18530140-18530159 | MS.gene83740:CDS | 20.0% |
!!! | TATTTTTTCCTATACTTTCA+GGG | - | chr3.2:18532177-18532196 | MS.gene83740:intron | 20.0% |
!!! | TGATGTTAATATTTTGCTAT+AGG | - | chr3.2:18530549-18530568 | MS.gene83740:CDS | 20.0% |
!!! | TTATTAGAGATGAATTTTAG+AGG | + | chr3.2:18530263-18530282 | None:intergenic | 20.0% |
!!! | TTATTTTTTCCTATACTTTC+AGG | - | chr3.2:18532176-18532195 | MS.gene83740:intron | 20.0% |
!!! | TTTTTTTTTGAAGGATAGTA+AGG | - | chr3.2:18531568-18531587 | MS.gene83740:intron | 20.0% |
! | AAAAACATACCAAGGATTTA+AGG | - | chr3.2:18530229-18530248 | MS.gene83740:intron | 25.0% |
! | AAAAGAATACAAGCAAAATG+AGG | + | chr3.2:18531061-18531080 | None:intergenic | 25.0% |
! | AAAGAATACAAGCAAAATGA+GGG | + | chr3.2:18531060-18531079 | None:intergenic | 25.0% |
! | AAGAGAAAAATATCTACAAG+AGG | + | chr3.2:18532009-18532028 | None:intergenic | 25.0% |
! | AAGATGTTGATGTTAAAATC+TGG | - | chr3.2:18531671-18531690 | MS.gene83740:intron | 25.0% |
! | ACATCATAAAAAACATACCA+AGG | - | chr3.2:18530221-18530240 | MS.gene83740:intron | 25.0% |
! | ACTAATATTTCTTCATCCAT+AGG | + | chr3.2:18531879-18531898 | None:intergenic | 25.0% |
! | AGAGAAAAATATCTACAAGA+GGG | + | chr3.2:18532008-18532027 | None:intergenic | 25.0% |
! | AGTAACACTAATATTGATCA+AGG | - | chr3.2:18531703-18531722 | MS.gene83740:intron | 25.0% |
! | ATATGGTTGTTTAATTGTAG+TGG | + | chr3.2:18530959-18530978 | None:intergenic | 25.0% |
! | TCACTAAGTAATAGATACAA+GGG | - | chr3.2:18532353-18532372 | MS.gene83740:CDS | 25.0% |
! | TTCACTAAGTAATAGATACA+AGG | - | chr3.2:18532352-18532371 | MS.gene83740:CDS | 25.0% |
! | TTGTTTCAAATGAATTGCAT+TGG | + | chr3.2:18530704-18530723 | None:intergenic | 25.0% |
!! | AAATGAATTTTGTAGGAAGA+TGG | - | chr3.2:18531634-18531653 | MS.gene83740:intron | 25.0% |
!! | AGTGACCTATACAAATTTTA+AGG | - | chr3.2:18530368-18530387 | MS.gene83740:intron | 25.0% |
!! | GACCTCAAAAATGATATTTT+TGG | - | chr3.2:18530128-18530147 | MS.gene83740:CDS | 25.0% |
!! | GTGACCTATACAAATTTTAA+GGG | - | chr3.2:18530369-18530388 | MS.gene83740:intron | 25.0% |
!! | TTATCGTTAATAGATGGTTT+TGG | - | chr3.2:18531973-18531992 | MS.gene83740:intron | 25.0% |
!! | TTTTTACTAAACCAGAAGAA+AGG | + | chr3.2:18532137-18532156 | None:intergenic | 25.0% |
!!! | AAACAAAATTTTGAGTTTGG+TGG | - | chr3.2:18532045-18532064 | MS.gene83740:intron | 25.0% |
!!! | AACACAAGTTTTAGAAACTA+AGG | - | chr3.2:18532722-18532741 | MS.gene83740:CDS | 25.0% |
!!! | AATAAACTCACTTTTGAATG+AGG | + | chr3.2:18531201-18531220 | None:intergenic | 25.0% |
!!! | AATTTGGTTTTTATAAGGAC+TGG | - | chr3.2:18532493-18532512 | MS.gene83740:CDS | 25.0% |
!!! | ATTCTTTGTTGTTTCTGAAA+TGG | + | chr3.2:18530994-18531013 | None:intergenic | 25.0% |
!!! | ATTTTTTCCTATACTTTCAG+GGG | - | chr3.2:18532178-18532197 | MS.gene83740:intron | 25.0% |
AAAACGACAACAATACTTGA+AGG | + | chr3.2:18531237-18531256 | None:intergenic | 30.0% | |
AAACCTTCATCTATTTGAGA+AGG | + | chr3.2:18532206-18532225 | None:intergenic | 30.0% | |
AAATGCATTGGAAAAGCTAT+TGG | - | chr3.2:18532566-18532585 | MS.gene83740:CDS | 30.0% | |
AACCTTCATCTATTTGAGAA+GGG | + | chr3.2:18532205-18532224 | None:intergenic | 30.0% | |
AAGAATACAAGCAAAATGAG+GGG | + | chr3.2:18531059-18531078 | None:intergenic | 30.0% | |
AATACAAGAGAGTCTTGATT+TGG | + | chr3.2:18531904-18531923 | None:intergenic | 30.0% | |
AATTGAAGCTTCTATAGTAG+AGG | - | chr3.2:18530307-18530326 | MS.gene83740:intron | 30.0% | |
AGAAAAATATCTACAAGAGG+GGG | + | chr3.2:18532006-18532025 | None:intergenic | 30.0% | |
ATCAGTAGCTAAATGATTCT+TGG | + | chr3.2:18532273-18532292 | None:intergenic | 30.0% | |
ATGATGTAAATATTACCGCA+TGG | + | chr3.2:18530208-18530227 | None:intergenic | 30.0% | |
ATTAGCTGCTTCTAAACAAA+AGG | - | chr3.2:18531028-18531047 | MS.gene83740:intron | 30.0% | |
GAAAATCATCCTTAAATCCT+TGG | + | chr3.2:18530241-18530260 | None:intergenic | 30.0% | |
GAAAGTAAGCTCAAATATTC+AGG | - | chr3.2:18531845-18531864 | MS.gene83740:CDS | 30.0% | |
GAGAAAAATATCTACAAGAG+GGG | + | chr3.2:18532007-18532026 | None:intergenic | 30.0% | |
GGTTCAACTTCAAAATGAAA+AGG | + | chr3.2:18531775-18531794 | None:intergenic | 30.0% | |
TAACACTTTAAATCGACATG+TGG | - | chr3.2:18532638-18532657 | MS.gene83740:CDS | 30.0% | |
TCAAAATGAAAAGGCTAATG+AGG | + | chr3.2:18531766-18531785 | None:intergenic | 30.0% | |
TGAAGGTTTAAGCTCTTATT+TGG | - | chr3.2:18532217-18532236 | MS.gene83740:intron | 30.0% | |
TTTAACATCAACATCTTGAG+TGG | + | chr3.2:18531668-18531687 | None:intergenic | 30.0% | |
TTTCAAATGAATTGCATTGG+TGG | + | chr3.2:18530701-18530720 | None:intergenic | 30.0% | |
! | ACTTCAGTGATTTTTGAACT+TGG | + | chr3.2:18530802-18530821 | None:intergenic | 30.0% |
! | TTTGGTTCAAATATTGGCTA+TGG | - | chr3.2:18530146-18530165 | MS.gene83740:CDS | 30.0% |
!!! | GCGCAAATTTGGTTTTTATA+AGG | - | chr3.2:18532488-18532507 | MS.gene83740:CDS | 30.0% |
AAAAATATCTACAAGAGGGG+GGG | + | chr3.2:18532004-18532023 | None:intergenic | 35.0% | |
ACATCCAACATGTACACTAT+GGG | + | chr3.2:18532423-18532442 | None:intergenic | 35.0% | |
AGCTCTTTACATTTGGAGAT+TGG | + | chr3.2:18529888-18529907 | None:intergenic | 35.0% | |
AGCTTGAAATTGAATTCCCT+GGG | + | chr3.2:18530048-18530067 | None:intergenic | 35.0% | |
ATGCTACAATCTTCTAAGCA+GGG | - | chr3.2:18531114-18531133 | MS.gene83740:intron | 35.0% | |
ATTTAGGGAAGCTGAACAAA+GGG | + | chr3.2:18531811-18531830 | None:intergenic | 35.0% | |
CATGACAGCATCATCATTTA+GGG | + | chr3.2:18531826-18531845 | None:intergenic | 35.0% | |
GAAAAATATCTACAAGAGGG+GGG | + | chr3.2:18532005-18532024 | None:intergenic | 35.0% | |
GAACTCGAGGAAATATTTGT+TGG | - | chr3.2:18529945-18529964 | MS.gene83740:CDS | 35.0% | |
GAATTGAAGGATGCTTAACA+AGG | + | chr3.2:18532319-18532338 | None:intergenic | 35.0% | |
GAATTGTCAAAAACTCTCTC+TGG | - | chr3.2:18530088-18530107 | MS.gene83740:CDS | 35.0% | |
GCGTTCGTTAAAAGAATTGA+AGG | + | chr3.2:18532332-18532351 | None:intergenic | 35.0% | |
TACCAACCTAATTGAGATGT+CGG | - | chr3.2:18532091-18532110 | MS.gene83740:intron | 35.0% | |
TAGACACGTTATTGTAGAAC+TGG | + | chr3.2:18529697-18529716 | None:intergenic | 35.0% | |
TATAGGTTATGAATTGCGCA+AGG | - | chr3.2:18530566-18530585 | MS.gene83740:CDS | 35.0% | |
TATGCTACAATCTTCTAAGC+AGG | - | chr3.2:18531113-18531132 | MS.gene83740:intron | 35.0% | |
TATTCAGGATGAGTTTCCTA+TGG | - | chr3.2:18531860-18531879 | MS.gene83740:intron | 35.0% | |
TCATGACAGCATCATCATTT+AGG | + | chr3.2:18531827-18531846 | None:intergenic | 35.0% | |
TGTTGATGTTAAAATCTGGC+AGG | - | chr3.2:18531675-18531694 | MS.gene83740:intron | 35.0% | |
TTACAAGATGTGCGCAAATT+TGG | - | chr3.2:18532477-18532496 | MS.gene83740:CDS | 35.0% | |
TTAGAAGCAGCTAATTGTAG+AGG | + | chr3.2:18531023-18531042 | None:intergenic | 35.0% | |
TTGCAAAAGGGGATAAAGTT+AGG | - | chr3.2:18531355-18531374 | MS.gene83740:intron | 35.0% | |
! | ACTGAAGTTCAAGTTACATC+AGG | - | chr3.2:18530814-18530833 | MS.gene83740:intron | 35.0% |
! | AGGTGATGAAGTTTTTGTCT+TGG | + | chr3.2:18531181-18531200 | None:intergenic | 35.0% |
! | ATAGTAGAGGTATGTGTGAT+AGG | - | chr3.2:18530320-18530339 | MS.gene83740:intron | 35.0% |
! | CTCTTATTTGGTTGTCACAA+GGG | - | chr3.2:18532229-18532248 | MS.gene83740:intron | 35.0% |
! | TTTATCCCCTTTTGCAAAAG+TGG | + | chr3.2:18531352-18531371 | None:intergenic | 35.0% |
!! | AAATTCCTTAAAGAGTGTCC+TGG | + | chr3.2:18530413-18530432 | None:intergenic | 35.0% |
!! | AATGGTGGACAAAGTTGATA+TGG | + | chr3.2:18530976-18530995 | None:intergenic | 35.0% |
!! | AATTCCTTAAAGAGTGTCCT+GGG | + | chr3.2:18530412-18530431 | None:intergenic | 35.0% |
!! | CTTTGTTGTTTCTGAAATGG+TGG | + | chr3.2:18530991-18531010 | None:intergenic | 35.0% |
!! | GTTGACTTGGTTAGAATTGA+GGG | - | chr3.2:18531320-18531339 | MS.gene83740:intron | 35.0% |
!! | TGGTTTTTATAAGGACTGGT+TGG | - | chr3.2:18532497-18532516 | MS.gene83740:CDS | 35.0% |
!!! | ACATCGAGTGATTTTAGCTT+TGG | + | chr3.2:18529834-18529853 | None:intergenic | 35.0% |
ACTTGGTTAGAATTGAGGGT+TGG | - | chr3.2:18531324-18531343 | MS.gene83740:intron | 40.0% | |
AGAAGAAAGGACAGACATCA+AGG | + | chr3.2:18532124-18532143 | None:intergenic | 40.0% | |
ATCGAGATACGTGTTGAAGA+AGG | - | chr3.2:18531138-18531157 | MS.gene83740:intron | 40.0% | |
ATTCTCATATCACGCAACTG+TGG | + | chr3.2:18529720-18529739 | None:intergenic | 40.0% | |
CAAACCCATAGTGTACATGT+TGG | - | chr3.2:18532416-18532435 | MS.gene83740:CDS | 40.0% | |
CAACATGTACACTATGGGTT+TGG | + | chr3.2:18532418-18532437 | None:intergenic | 40.0% | |
CACATCCAACATGTACACTA+TGG | + | chr3.2:18532424-18532443 | None:intergenic | 40.0% | |
CAGCTTGAAATTGAATTCCC+TGG | + | chr3.2:18530049-18530068 | None:intergenic | 40.0% | |
CATTTAGGGAAGCTGAACAA+AGG | + | chr3.2:18531812-18531831 | None:intergenic | 40.0% | |
CTCAGGAAGCTCTTTACATT+TGG | + | chr3.2:18529895-18529914 | None:intergenic | 40.0% | |
GAAACACCGACATCTCAATT+AGG | + | chr3.2:18532100-18532119 | None:intergenic | 40.0% | |
GACCCTTCTCAAATAGATGA+AGG | - | chr3.2:18532200-18532219 | MS.gene83740:intron | 40.0% | |
GTGTACATGTTGGATGTGTT+AGG | - | chr3.2:18532426-18532445 | MS.gene83740:CDS | 40.0% | |
TAACCAAGTCAACGCATATG+TGG | + | chr3.2:18531313-18531332 | None:intergenic | 40.0% | |
TAGCTCAACTAGACAGTTGT+AGG | + | chr3.2:18532384-18532403 | None:intergenic | 40.0% | |
TGATCAAGGTGAAGACTCTT+TGG | - | chr3.2:18531717-18531736 | MS.gene83740:intron | 40.0% | |
TGTCTTGGCATTAGCTGATA+TGG | + | chr3.2:18531166-18531185 | None:intergenic | 40.0% | |
TTGATGTCTGTCCTTTCTTC+TGG | - | chr3.2:18532123-18532142 | MS.gene83740:intron | 40.0% | |
TTGTTGGCGAAGATGATCAT+CGG | - | chr3.2:18529961-18529980 | MS.gene83740:CDS | 40.0% | |
! | ATACCTTCAGAAGGCTTTGA+AGG | + | chr3.2:18531939-18531958 | None:intergenic | 40.0% |
! | GCTCTTATTTGGTTGTCACA+AGG | - | chr3.2:18532228-18532247 | MS.gene83740:intron | 40.0% |
! | TGAGTTTGGTGGCATAAGAT+GGG | - | chr3.2:18532056-18532075 | MS.gene83740:intron | 40.0% |
! | TTGAGTTTGGTGGCATAAGA+TGG | - | chr3.2:18532055-18532074 | MS.gene83740:intron | 40.0% |
! | TTGGTGGCTGTATTCATATG+TGG | + | chr3.2:18530685-18530704 | None:intergenic | 40.0% |
!! | ATTCCTTAAAGAGTGTCCTG+GGG | + | chr3.2:18530411-18530430 | None:intergenic | 40.0% |
!! | CGTTGACTTGGTTAGAATTG+AGG | - | chr3.2:18531319-18531338 | MS.gene83740:intron | 40.0% |
!!! | GACAGTCTCTGAAGCTATTT+TGG | - | chr3.2:18532680-18532699 | MS.gene83740:CDS | 40.0% |
!!! | TTGGTGCCACTTTTGCAAAA+GGG | - | chr3.2:18531343-18531362 | MS.gene83740:intron | 40.0% |
!!! | TTTTCTGAAGCTATTCGAGC+AGG | - | chr3.2:18530590-18530609 | MS.gene83740:CDS | 40.0% |
AAAGAGCTTCCTGAGCTACA+GGG | - | chr3.2:18529900-18529919 | MS.gene83740:CDS | 45.0% | |
AAATGCTAATGAGTGTCCCC+AGG | - | chr3.2:18530392-18530411 | MS.gene83740:intron | 45.0% | |
AACAAAGGGTGGGAAAGAAG+AGG | + | chr3.2:18531797-18531816 | None:intergenic | 45.0% | |
AACTCATGCTCTGTGTCTAG+TGG | + | chr3.2:18530762-18530781 | None:intergenic | 45.0% | |
ACAAAGGGTGGGAAAGAAGA+GGG | + | chr3.2:18531796-18531815 | None:intergenic | 45.0% | |
AGAAGTCAACTCGTGACCTT+TGG | + | chr3.2:18530628-18530647 | None:intergenic | 45.0% | |
ATCATTAGACCCTGTAGCTC+AGG | + | chr3.2:18529912-18529931 | None:intergenic | 45.0% | |
ATTCGAGCAGGTACATGATG+AGG | - | chr3.2:18530602-18530621 | MS.gene83740:intron | 45.0% | |
CACCGACATCTCAATTAGGT+TGG | + | chr3.2:18532096-18532115 | None:intergenic | 45.0% | |
CATAAGATGGGGGTTCATTG+GGG | - | chr3.2:18532068-18532087 | MS.gene83740:intron | 45.0% | |
CATGTACACTATGGGTTTGG+AGG | + | chr3.2:18532415-18532434 | None:intergenic | 45.0% | |
CGAAGATGATCATCGGAAAG+TGG | - | chr3.2:18529968-18529987 | MS.gene83740:CDS | 45.0% | |
GCATAAGATGGGGGTTCATT+GGG | - | chr3.2:18532067-18532086 | MS.gene83740:intron | 45.0% | |
GCGCATTTCTTCAACTTCCT+TGG | + | chr3.2:18532610-18532629 | None:intergenic | 45.0% | |
TAAAGAGCTTCCTGAGCTAC+AGG | - | chr3.2:18529899-18529918 | MS.gene83740:CDS | 45.0% | |
TCTCCTTCAAAGCCTTCTGA+AGG | - | chr3.2:18531933-18531952 | MS.gene83740:intron | 45.0% | |
TTCCTTGGTTACACGCTTCT+GGG | + | chr3.2:18532595-18532614 | None:intergenic | 45.0% | |
! | ACACGAGTTGACTTCTTCAC+AGG | - | chr3.2:18530837-18530856 | MS.gene83740:intron | 45.0% |
! | AGTTTGGTGGCATAAGATGG+GGG | - | chr3.2:18532058-18532077 | MS.gene83740:intron | 45.0% |
! | GAGTTTGGTGGCATAAGATG+GGG | - | chr3.2:18532057-18532076 | MS.gene83740:intron | 45.0% |
!! | TTGCCACATATGCGTTGACT+TGG | - | chr3.2:18531307-18531326 | MS.gene83740:CDS | 45.0% |
!!! | GTTGGTGCCACTTTTGCAAA+AGG | - | chr3.2:18531342-18531361 | MS.gene83740:intron | 45.0% |
!!! | TGGTGCCACTTTTGCAAAAG+GGG | - | chr3.2:18531344-18531363 | MS.gene83740:intron | 45.0% |
!! | ATGTAATTATTTAAAAATAT+TGG | + | chr3.2:18530184-18530203 | None:intergenic | 5.0% |
AAGCGAAGCAGATGAACTCG+AGG | - | chr3.2:18529932-18529951 | MS.gene83740:CDS | 50.0% | |
AGGGAAGCTGAACAAAGGGT+GGG | + | chr3.2:18531807-18531826 | None:intergenic | 50.0% | |
CAGGTACATGATGAGGCCAA+AGG | - | chr3.2:18530609-18530628 | MS.gene83740:intron | 50.0% | |
CTTCCTTGGTTACACGCTTC+TGG | + | chr3.2:18532596-18532615 | None:intergenic | 50.0% | |
GAATTCCCTGGGCATGACTA+AGG | + | chr3.2:18530037-18530056 | None:intergenic | 50.0% | |
GGCATAAGATGGGGGTTCAT+TGG | - | chr3.2:18532066-18532085 | MS.gene83740:intron | 50.0% | |
TAGGGAAGCTGAACAAAGGG+TGG | + | chr3.2:18531808-18531827 | None:intergenic | 50.0% | |
TGTCCCCAGGACACTCTTTA+AGG | - | chr3.2:18530405-18530424 | MS.gene83740:intron | 50.0% | |
! | GAAGGGTCCCCTGAAAGTAT+AGG | + | chr3.2:18532188-18532207 | None:intergenic | 50.0% |
! | TTCCCAGAAGCGTGTAACCA+AGG | - | chr3.2:18532590-18532609 | MS.gene83740:CDS | 50.0% |
!! | GGCTTTGAAGGAGACTGAGA+TGG | + | chr3.2:18531927-18531946 | None:intergenic | 50.0% |
ACCAAGCCTTAGTCATGCCC+AGG | - | chr3.2:18530028-18530047 | MS.gene83740:intron | 55.0% | |
CCAAGCCTTAGTCATGCCCA+GGG | - | chr3.2:18530029-18530048 | MS.gene83740:intron | 55.0% | |
! | GCTGCTTTAAGTGCCCCTCT+TGG | - | chr3.2:18532744-18532763 | MS.gene83740:CDS | 55.0% |
CCCTGGGCATGACTAAGGCT+TGG | + | chr3.2:18530032-18530051 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 18529663 | 18532773 | 18529663 | ID=MS.gene83740 |
chr3.2 | mRNA | 18529663 | 18532773 | 18529663 | ID=MS.gene83740.t1;Parent=MS.gene83740 |
chr3.2 | exon | 18532269 | 18532773 | 18532269 | ID=MS.gene83740.t1.exon1;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18532269 | 18532773 | 18532269 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18531825 | 18531865 | 18531825 | ID=MS.gene83740.t1.exon2;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18531825 | 18531865 | 18531825 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18531227 | 18531337 | 18531227 | ID=MS.gene83740.t1.exon3;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18531227 | 18531337 | 18531227 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18530712 | 18530787 | 18530712 | ID=MS.gene83740.t1.exon4;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18530712 | 18530787 | 18530712 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18530482 | 18530616 | 18530482 | ID=MS.gene83740.t1.exon5;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18530482 | 18530616 | 18530482 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18530077 | 18530238 | 18530077 | ID=MS.gene83740.t1.exon6;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18530077 | 18530238 | 18530077 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
chr3.2 | exon | 18529663 | 18529988 | 18529663 | ID=MS.gene83740.t1.exon7;Parent=MS.gene83740.t1 |
chr3.2 | CDS | 18529663 | 18529988 | 18529663 | ID=cds.MS.gene83740.t1;Parent=MS.gene83740.t1 |
Gene Sequence |
Protein sequence |