Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83765.t1 | RHN72162.1 | 91.7 | 605 | 45 | 2 | 1 | 602 | 1 | 603 | 0.00E+00 | 1086.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83765.t1 | P26413 | 67.7 | 613 | 173 | 6 | 1 | 596 | 1 | 605 | 2.5e-232 | 806.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83765.t1 | A0A396J4A8 | 91.7 | 605 | 45 | 2 | 1 | 602 | 1 | 603 | 0.0e+00 | 1086.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055357 | MS.gene83765 | 0.801234 | 9.91E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83765.t1 | MTR_2g017730 | 91.570 | 605 | 46 | 2 | 1 | 602 | 1 | 603 | 0.0 | 1134 |
| MS.gene83765.t1 | MTR_4g130540 | 68.026 | 613 | 171 | 6 | 1 | 596 | 1 | 605 | 0.0 | 853 |
| MS.gene83765.t1 | MTR_4g063710 | 66.832 | 606 | 176 | 6 | 8 | 596 | 9 | 606 | 0.0 | 817 |
| MS.gene83765.t1 | MTR_4g063720 | 66.502 | 606 | 178 | 6 | 8 | 596 | 9 | 606 | 0.0 | 813 |
| MS.gene83765.t1 | MTR_7g024390 | 66.063 | 607 | 181 | 6 | 8 | 597 | 9 | 607 | 0.0 | 808 |
| MS.gene83765.t1 | MTR_7g099680 | 65.677 | 606 | 183 | 6 | 8 | 596 | 9 | 606 | 0.0 | 805 |
| MS.gene83765.t1 | MTR_7g024580 | 65.842 | 606 | 182 | 6 | 8 | 596 | 9 | 606 | 0.0 | 802 |
| MS.gene83765.t1 | MTR_6g033850 | 54.833 | 600 | 245 | 6 | 8 | 590 | 9 | 599 | 0.0 | 662 |
| MS.gene83765.t1 | MTR_6g033760 | 55.500 | 600 | 241 | 6 | 8 | 590 | 9 | 599 | 0.0 | 649 |
| MS.gene83765.t1 | MTR_8g099795 | 55.259 | 599 | 237 | 8 | 2 | 581 | 32 | 618 | 0.0 | 648 |
| MS.gene83765.t1 | MTR_7g025820 | 58.185 | 562 | 220 | 7 | 5 | 561 | 6 | 557 | 0.0 | 647 |
| MS.gene83765.t1 | MTR_8g099945 | 54.515 | 598 | 241 | 8 | 3 | 581 | 33 | 618 | 0.0 | 644 |
| MS.gene83765.t1 | MTR_5g066800 | 53.920 | 625 | 248 | 9 | 8 | 602 | 9 | 623 | 0.0 | 644 |
| MS.gene83765.t1 | MTR_7g026030 | 57.066 | 559 | 224 | 9 | 8 | 561 | 9 | 556 | 0.0 | 639 |
| MS.gene83765.t1 | MTR_7g025760 | 56.584 | 562 | 229 | 7 | 5 | 561 | 6 | 557 | 0.0 | 635 |
| MS.gene83765.t1 | MTR_7g021440 | 54.516 | 609 | 248 | 9 | 8 | 597 | 9 | 607 | 0.0 | 634 |
| MS.gene83765.t1 | MTR_2g038260 | 54.045 | 618 | 254 | 10 | 5 | 602 | 6 | 613 | 0.0 | 632 |
| MS.gene83765.t1 | MTR_7g451380 | 57.194 | 563 | 227 | 6 | 8 | 565 | 9 | 562 | 0.0 | 623 |
| MS.gene83765.t1 | MTR_7g025790 | 56.406 | 562 | 229 | 8 | 5 | 561 | 6 | 556 | 0.0 | 623 |
| MS.gene83765.t1 | MTR_7g025720 | 56.172 | 559 | 229 | 8 | 8 | 561 | 9 | 556 | 0.0 | 623 |
| MS.gene83765.t1 | MTR_2g032550 | 53.234 | 603 | 253 | 9 | 7 | 589 | 9 | 602 | 0.0 | 623 |
| MS.gene83765.t1 | MTR_8g032650 | 56.887 | 559 | 225 | 8 | 8 | 561 | 9 | 556 | 0.0 | 622 |
| MS.gene83765.t1 | MTR_7g025770 | 52.846 | 615 | 260 | 10 | 8 | 602 | 9 | 613 | 0.0 | 616 |
| MS.gene83765.t1 | MTR_6g033955 | 51.901 | 605 | 264 | 7 | 5 | 589 | 6 | 603 | 0.0 | 615 |
| MS.gene83765.t1 | MTR_7g025740 | 53.084 | 616 | 254 | 9 | 8 | 597 | 9 | 615 | 0.0 | 615 |
| MS.gene83765.t1 | MTR_7g026110 | 52.053 | 609 | 261 | 10 | 8 | 597 | 9 | 605 | 0.0 | 613 |
| MS.gene83765.t1 | MTR_6g033870 | 52.483 | 604 | 263 | 7 | 5 | 589 | 7 | 605 | 0.0 | 613 |
| MS.gene83765.t1 | MTR_7g026090 | 55.300 | 566 | 236 | 8 | 8 | 568 | 9 | 562 | 0.0 | 612 |
| MS.gene83765.t1 | MTR_6g033820 | 52.138 | 608 | 267 | 7 | 1 | 589 | 1 | 603 | 0.0 | 610 |
| MS.gene83765.t1 | MTR_7g029415 | 53.215 | 622 | 260 | 11 | 1 | 602 | 9 | 619 | 0.0 | 610 |
| MS.gene83765.t1 | MTR_7g025620 | 55.098 | 559 | 235 | 8 | 8 | 561 | 9 | 556 | 0.0 | 610 |
| MS.gene83765.t1 | MTR_7g024030 | 54.804 | 562 | 238 | 8 | 5 | 561 | 6 | 556 | 0.0 | 610 |
| MS.gene83765.t1 | MTR_7g078190 | 55.672 | 573 | 229 | 11 | 8 | 573 | 9 | 563 | 0.0 | 607 |
| MS.gene83765.t1 | MTR_2g022050 | 52.195 | 615 | 265 | 9 | 8 | 602 | 9 | 614 | 0.0 | 603 |
| MS.gene83765.t1 | MTR_7g026170 | 52.504 | 619 | 262 | 11 | 5 | 602 | 6 | 613 | 0.0 | 602 |
| MS.gene83765.t1 | MTR_7g011590 | 52.080 | 601 | 246 | 10 | 8 | 589 | 9 | 586 | 0.0 | 598 |
| MS.gene83765.t1 | MTR_4g079590 | 51.545 | 615 | 268 | 10 | 8 | 602 | 9 | 613 | 0.0 | 598 |
| MS.gene83765.t1 | MTR_8g103930 | 51.129 | 620 | 247 | 11 | 8 | 597 | 11 | 604 | 0.0 | 590 |
| MS.gene83765.t1 | MTR_7g025630 | 54.025 | 559 | 227 | 10 | 8 | 561 | 9 | 542 | 0.0 | 586 |
| MS.gene83765.t1 | MTR_7g078210 | 55.536 | 560 | 228 | 9 | 8 | 559 | 9 | 555 | 0.0 | 585 |
| MS.gene83765.t1 | MTR_2g437440 | 50.404 | 619 | 260 | 9 | 4 | 602 | 5 | 596 | 0.0 | 583 |
| MS.gene83765.t1 | MTR_7g074460 | 51.724 | 609 | 247 | 10 | 8 | 597 | 9 | 589 | 0.0 | 577 |
| MS.gene83765.t1 | MTR_7g026140 | 53.534 | 566 | 232 | 8 | 5 | 565 | 6 | 545 | 0.0 | 573 |
| MS.gene83765.t1 | MTR_2g038270 | 50.160 | 624 | 270 | 13 | 9 | 602 | 10 | 622 | 0.0 | 573 |
| MS.gene83765.t1 | MTR_7g026130 | 50.965 | 622 | 270 | 10 | 5 | 602 | 6 | 616 | 0.0 | 571 |
| MS.gene83765.t1 | MTR_2g032580 | 50.502 | 598 | 252 | 9 | 8 | 599 | 9 | 568 | 0.0 | 561 |
| MS.gene83765.t1 | MTR_4g027145 | 49.445 | 631 | 275 | 13 | 5 | 602 | 6 | 625 | 0.0 | 557 |
| MS.gene83765.t1 | MTR_1g017130 | 47.480 | 615 | 255 | 10 | 7 | 602 | 8 | 573 | 0.0 | 549 |
| MS.gene83765.t1 | MTR_7g025260 | 52.820 | 532 | 236 | 7 | 38 | 564 | 11 | 532 | 0.0 | 544 |
| MS.gene83765.t1 | MTR_7g451360 | 51.423 | 562 | 206 | 7 | 8 | 567 | 9 | 505 | 0.0 | 534 |
| MS.gene83765.t1 | MTR_7g007000 | 50.973 | 565 | 217 | 8 | 7 | 565 | 8 | 518 | 0.0 | 530 |
| MS.gene83765.t1 | MTR_6g033800 | 52.216 | 519 | 220 | 7 | 89 | 590 | 1 | 508 | 0.0 | 523 |
| MS.gene83765.t1 | MTR_2g040220 | 54.144 | 543 | 175 | 8 | 8 | 541 | 1018 | 1495 | 6.82e-178 | 545 |
| MS.gene83765.t1 | MTR_7g035155 | 46.764 | 618 | 245 | 13 | 5 | 602 | 6 | 559 | 3.45e-172 | 501 |
| MS.gene83765.t1 | MTR_2g040370 | 66.324 | 389 | 121 | 4 | 8 | 396 | 1029 | 1407 | 8.34e-168 | 522 |
| MS.gene83765.t1 | MTR_2g040370 | 65.206 | 388 | 124 | 6 | 8 | 394 | 1413 | 1790 | 5.52e-153 | 482 |
| MS.gene83765.t1 | MTR_2g040370 | 66.324 | 389 | 121 | 4 | 8 | 396 | 1029 | 1407 | 1.33e-167 | 522 |
| MS.gene83765.t1 | MTR_2g040370 | 65.206 | 388 | 124 | 6 | 8 | 394 | 1413 | 1790 | 8.17e-153 | 482 |
| MS.gene83765.t1 | MTR_1g041565 | 46.569 | 612 | 223 | 15 | 8 | 597 | 5 | 534 | 4.79e-167 | 487 |
| MS.gene83765.t1 | MTR_2g040260 | 62.250 | 400 | 141 | 5 | 8 | 407 | 1038 | 1427 | 8.03e-164 | 506 |
| MS.gene83765.t1 | MTR_2g032160 | 61.600 | 375 | 134 | 4 | 8 | 380 | 9 | 375 | 8.80e-162 | 471 |
| MS.gene83765.t1 | MTR_2g010020 | 46.037 | 593 | 275 | 16 | 9 | 583 | 58 | 623 | 1.70e-161 | 478 |
| MS.gene83765.t1 | MTR_2g010020 | 46.037 | 593 | 275 | 16 | 9 | 583 | 57 | 622 | 1.98e-161 | 477 |
| MS.gene83765.t1 | MTR_4g092920 | 44.610 | 603 | 294 | 14 | 6 | 591 | 51 | 630 | 1.72e-157 | 467 |
| MS.gene83765.t1 | MTR_2g040160 | 62.000 | 400 | 142 | 5 | 8 | 407 | 1109 | 1498 | 8.16e-157 | 488 |
| MS.gene83765.t1 | MTR_2g040350 | 58.911 | 404 | 152 | 6 | 8 | 407 | 820 | 1213 | 6.14e-149 | 461 |
| MS.gene83765.t1 | MTR_2g040350 | 58.911 | 404 | 152 | 6 | 8 | 407 | 1038 | 1431 | 4.18e-147 | 461 |
| MS.gene83765.t1 | MTR_2g005690 | 45.095 | 581 | 285 | 14 | 7 | 575 | 70 | 628 | 3.31e-146 | 439 |
| MS.gene83765.t1 | MTR_4g092920 | 44.316 | 519 | 250 | 13 | 89 | 591 | 1 | 496 | 5.76e-130 | 392 |
| MS.gene83765.t1 | MTR_6g034005 | 45.382 | 498 | 239 | 11 | 79 | 563 | 2 | 479 | 1.03e-128 | 394 |
| MS.gene83765.t1 | MTR_4g063720 | 60.000 | 320 | 107 | 4 | 294 | 596 | 220 | 535 | 3.79e-124 | 378 |
| MS.gene83765.t1 | MTR_4g063720 | 65.185 | 270 | 70 | 4 | 8 | 266 | 9 | 265 | 1.71e-112 | 348 |
| MS.gene83765.t1 | MTR_1g077230 | 62.633 | 281 | 99 | 3 | 5 | 283 | 6 | 282 | 1.58e-120 | 358 |
| MS.gene83765.t1 | MTR_7g026080 | 65.272 | 239 | 79 | 2 | 8 | 244 | 9 | 245 | 2.17e-107 | 324 |
| MS.gene83765.t1 | MTR_4g088515 | 43.936 | 437 | 149 | 9 | 7 | 441 | 275 | 617 | 3.21e-100 | 317 |
| MS.gene83765.t1 | MTR_2g031670 | 56.522 | 253 | 106 | 2 | 14 | 264 | 37 | 287 | 7.74e-94 | 292 |
| MS.gene83765.t1 | MTR_2g031670 | 55.128 | 78 | 29 | 4 | 338 | 415 | 269 | 340 | 3.19e-14 | 74.7 |
| MS.gene83765.t1 | MTR_6g033810 | 47.059 | 340 | 123 | 5 | 83 | 422 | 9 | 291 | 6.30e-93 | 288 |
| MS.gene83765.t1 | MTR_7g026050 | 40.642 | 374 | 176 | 6 | 244 | 602 | 1 | 343 | 8.58e-83 | 264 |
| MS.gene83765.t1 | MTR_6g033855 | 42.487 | 386 | 124 | 9 | 83 | 465 | 9 | 299 | 1.20e-82 | 262 |
| MS.gene83765.t1 | MTR_4g012050 | 33.857 | 446 | 271 | 6 | 9 | 441 | 4 | 438 | 3.30e-74 | 254 |
| MS.gene83765.t1 | MTR_2g102180 | 31.866 | 477 | 299 | 8 | 9 | 470 | 4 | 469 | 4.33e-73 | 251 |
| MS.gene83765.t1 | MTR_6g478100 | 52.381 | 231 | 93 | 4 | 35 | 265 | 10 | 223 | 7.53e-68 | 223 |
| MS.gene83765.t1 | MTR_2g017710 | 51.145 | 262 | 44 | 3 | 224 | 485 | 17 | 194 | 9.25e-68 | 221 |
| MS.gene83765.t1 | MTR_1207s0010 | 60.000 | 180 | 67 | 3 | 105 | 284 | 1 | 175 | 1.76e-67 | 217 |
| MS.gene83765.t1 | MTR_5g006180 | 30.966 | 507 | 306 | 13 | 8 | 498 | 29 | 507 | 2.43e-66 | 226 |
| MS.gene83765.t1 | MTR_5g097190 | 47.431 | 253 | 82 | 5 | 5 | 255 | 155 | 358 | 5.69e-66 | 220 |
| MS.gene83765.t1 | MTR_3g051300 | 29.563 | 504 | 333 | 8 | 9 | 502 | 4 | 495 | 9.02e-66 | 229 |
| MS.gene83765.t1 | MTR_5g092570 | 31.333 | 450 | 289 | 7 | 9 | 452 | 4 | 439 | 2.24e-64 | 226 |
| MS.gene83765.t1 | MTR_4g107920 | 30.315 | 508 | 316 | 12 | 9 | 500 | 21 | 506 | 5.09e-58 | 204 |
| MS.gene83765.t1 | MTR_4g115780 | 31.879 | 527 | 326 | 13 | 8 | 512 | 140 | 655 | 3.31e-57 | 204 |
| MS.gene83765.t1 | MTR_1g077240 | 46.939 | 245 | 121 | 5 | 323 | 564 | 1 | 239 | 1.29e-54 | 187 |
| MS.gene83765.t1 | MTR_5g090110 | 30.273 | 512 | 271 | 16 | 8 | 486 | 28 | 486 | 7.36e-54 | 192 |
| MS.gene83765.t1 | MTR_3g081170 | 26.365 | 531 | 347 | 11 | 6 | 502 | 24 | 544 | 1.56e-50 | 188 |
| MS.gene83765.t1 | MTR_7g026180 | 65.854 | 123 | 40 | 1 | 75 | 197 | 23 | 143 | 3.38e-46 | 166 |
| MS.gene83765.t1 | MTR_5g005890 | 40.693 | 231 | 82 | 5 | 71 | 300 | 5 | 181 | 5.14e-45 | 158 |
| MS.gene83765.t1 | MTR_2g040355 | 32.439 | 410 | 128 | 9 | 188 | 597 | 2 | 262 | 5.27e-45 | 162 |
| MS.gene83765.t1 | MTR_6g033910 | 41.256 | 223 | 76 | 5 | 61 | 281 | 9 | 178 | 1.72e-42 | 151 |
| MS.gene83765.t1 | MTR_5g005870 | 35.556 | 270 | 160 | 6 | 299 | 563 | 68 | 328 | 1.57e-41 | 155 |
| MS.gene83765.t1 | MTR_6g033805 | 70.423 | 71 | 20 | 1 | 1 | 70 | 1 | 71 | 3.52e-28 | 107 |
| MS.gene83765.t1 | MTR_7g074540 | 34.896 | 192 | 107 | 3 | 423 | 597 | 1 | 191 | 2.21e-27 | 110 |
| MS.gene83765.t1 | MTR_4g027235 | 65.714 | 70 | 22 | 1 | 5 | 72 | 6 | 75 | 1.70e-25 | 100 |
| MS.gene83765.t1 | MTR_4g027085 | 65.714 | 70 | 22 | 1 | 5 | 72 | 6 | 75 | 1.70e-25 | 100 |
| MS.gene83765.t1 | MTR_1g116250 | 31.852 | 270 | 120 | 9 | 349 | 600 | 60 | 283 | 2.23e-25 | 106 |
| MS.gene83765.t1 | MTR_7g451390 | 36.416 | 173 | 94 | 3 | 445 | 602 | 15 | 186 | 1.65e-23 | 98.6 |
| MS.gene83765.t1 | MTR_1g068900 | 38.411 | 151 | 82 | 4 | 420 | 565 | 14 | 158 | 2.83e-23 | 97.4 |
| MS.gene83765.t1 | MTR_7g026190 | 44.898 | 98 | 41 | 2 | 289 | 386 | 9 | 93 | 1.72e-19 | 87.8 |
| MS.gene83765.t1 | MTR_4g115860 | 38.462 | 91 | 53 | 1 | 404 | 491 | 30 | 120 | 1.64e-14 | 70.9 |
| MS.gene83765.t1 | MTR_7g026095 | 42.222 | 90 | 34 | 2 | 85 | 174 | 189 | 260 | 4.46e-14 | 74.3 |
| MS.gene83765.t1 | MTR_7g026095 | 34.646 | 127 | 73 | 4 | 448 | 564 | 208 | 334 | 1.82e-12 | 69.3 |
| MS.gene83765.t1 | MTR_2g017700 | 59.375 | 64 | 23 | 2 | 455 | 517 | 3 | 64 | 6.16e-13 | 64.3 |
| MS.gene83765.t1 | MTR_7g021430 | 29.412 | 187 | 114 | 4 | 214 | 389 | 1 | 180 | 1.76e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83765.t1 | AT1G16030 | 66.721 | 613 | 179 | 6 | 1 | 596 | 1 | 605 | 0.0 | 829 |
| MS.gene83765.t1 | AT3G12580 | 66.722 | 607 | 177 | 6 | 8 | 597 | 9 | 607 | 0.0 | 811 |
| MS.gene83765.t1 | AT5G02500 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 805 |
| MS.gene83765.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 798 |
| MS.gene83765.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 798 |
| MS.gene83765.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 798 |
| MS.gene83765.t1 | AT3G09440 | 65.898 | 607 | 182 | 6 | 8 | 597 | 9 | 607 | 0.0 | 798 |
| MS.gene83765.t1 | AT5G02490 | 65.074 | 607 | 187 | 6 | 8 | 597 | 9 | 607 | 0.0 | 791 |
| MS.gene83765.t1 | AT1G56410 | 64.793 | 605 | 190 | 7 | 8 | 597 | 9 | 605 | 0.0 | 783 |
| MS.gene83765.t1 | AT5G42020 | 55.375 | 614 | 243 | 8 | 2 | 596 | 31 | 632 | 0.0 | 668 |
| MS.gene83765.t1 | AT5G42020 | 55.375 | 614 | 243 | 8 | 2 | 596 | 36 | 637 | 0.0 | 667 |
| MS.gene83765.t1 | AT5G28540 | 55.212 | 614 | 244 | 8 | 2 | 596 | 31 | 632 | 0.0 | 664 |
| MS.gene83765.t1 | AT1G09080 | 55.446 | 606 | 240 | 7 | 9 | 596 | 43 | 636 | 0.0 | 647 |
| MS.gene83765.t1 | AT1G09080 | 55.446 | 606 | 240 | 7 | 9 | 596 | 53 | 646 | 0.0 | 646 |
| MS.gene83765.t1 | AT5G42020 | 51.500 | 600 | 233 | 11 | 2 | 596 | 31 | 577 | 0.0 | 579 |
| MS.gene83765.t1 | AT5G02500 | 70.051 | 394 | 110 | 4 | 8 | 401 | 9 | 394 | 0.0 | 567 |
| MS.gene83765.t1 | AT5G02500 | 45.652 | 92 | 36 | 1 | 520 | 597 | 386 | 477 | 8.77e-16 | 80.9 |
| MS.gene83765.t1 | AT5G09590 | 46.167 | 587 | 273 | 16 | 9 | 577 | 60 | 621 | 1.95e-156 | 465 |
| MS.gene83765.t1 | AT4G37910 | 46.316 | 570 | 268 | 13 | 9 | 563 | 55 | 601 | 2.44e-151 | 452 |
| MS.gene83765.t1 | AT4G37910 | 46.316 | 570 | 268 | 13 | 9 | 563 | 55 | 601 | 2.44e-151 | 452 |
| MS.gene83765.t1 | AT5G49910 | 44.234 | 581 | 290 | 14 | 7 | 575 | 79 | 637 | 7.59e-145 | 436 |
| MS.gene83765.t1 | AT4G24280 | 44.234 | 581 | 290 | 14 | 7 | 575 | 79 | 637 | 2.65e-144 | 435 |
| MS.gene83765.t1 | AT1G79930 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 5.22e-78 | 263 |
| MS.gene83765.t1 | AT1G79930 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 1.07e-77 | 263 |
| MS.gene83765.t1 | AT1G79920 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 2.57e-77 | 260 |
| MS.gene83765.t1 | AT1G79920 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 5.80e-77 | 259 |
| MS.gene83765.t1 | AT1G79920 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 5.80e-77 | 259 |
| MS.gene83765.t1 | AT1G79920 | 34.081 | 446 | 270 | 6 | 9 | 441 | 4 | 438 | 5.80e-77 | 259 |
| MS.gene83765.t1 | AT1G11660 | 28.111 | 651 | 393 | 16 | 9 | 602 | 4 | 636 | 3.72e-71 | 244 |
| MS.gene83765.t1 | AT1G11660 | 28.111 | 651 | 393 | 16 | 9 | 602 | 4 | 636 | 3.72e-71 | 244 |
| MS.gene83765.t1 | AT1G11660 | 28.111 | 651 | 393 | 16 | 9 | 602 | 4 | 636 | 3.72e-71 | 244 |
| MS.gene83765.t1 | AT2G32120 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 1.66e-65 | 224 |
| MS.gene83765.t1 | AT2G32120 | 30.077 | 522 | 322 | 13 | 8 | 512 | 30 | 525 | 1.66e-65 | 224 |
| MS.gene83765.t1 | AT1G11660 | 27.922 | 616 | 369 | 16 | 44 | 602 | 2 | 599 | 3.14e-62 | 219 |
| MS.gene83765.t1 | AT4G16660 | 26.154 | 455 | 303 | 8 | 5 | 436 | 23 | 467 | 1.11e-47 | 179 |
| MS.gene83765.t1 | AT4G16660 | 26.154 | 455 | 303 | 8 | 5 | 436 | 47 | 491 | 1.13e-47 | 179 |
Find 120 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAATTGCTGAAACTTATT+TGG | 0.082085 | 3.2:-17626820 | MS.gene83765:CDS |
| CATGGTGTTGTCTAAATTAA+AGG | 0.157364 | 3.2:-17626841 | MS.gene83765:CDS |
| TCAAAACAAATATTGATATT+TGG | 0.181030 | 3.2:+17625769 | None:intergenic |
| TTGATATTTGGAACCTTTCT+AGG | 0.182799 | 3.2:+17625781 | None:intergenic |
| ACTGCAGCTGCTATTGCTTA+TGG | 0.208608 | 3.2:-17626669 | MS.gene83765:CDS |
| TGGTTTGGAACAACCTTAAA+AGG | 0.212043 | 3.2:+17626936 | None:intergenic |
| TGTTGATGTTAATGGAATTT+TGG | 0.222928 | 3.2:-17625746 | MS.gene83765:CDS |
| GTTTCAACACCAAGACTAAA+AGG | 0.273894 | 3.2:+17625982 | None:intergenic |
| CAATCATGGGTTTGTCTTTG+TGG | 0.290878 | 3.2:+17626916 | None:intergenic |
| CCTGATGAAGCTGTGGCTTA+TGG | 0.330474 | 3.2:-17626081 | MS.gene83765:CDS |
| AATGTTCTTGTCTTTGATCT+TGG | 0.331932 | 3.2:-17626612 | MS.gene83765:CDS |
| AGTGAGAATTCCAAAGCTTT+GGG | 0.332188 | 3.2:-17626426 | MS.gene83765:CDS |
| GAAATTGCTGAAACTTATTT+GGG | 0.342870 | 3.2:-17626819 | MS.gene83765:CDS |
| ACACGGTTCCCTTGGTCGTT+TGG | 0.354947 | 3.2:+17627119 | None:intergenic |
| CGAAGGAATGTTCCAGGTTA+AGG | 0.357597 | 3.2:-17626553 | MS.gene83765:CDS |
| GAGGGATGCCGAGCGGTATA+AGG | 0.359508 | 3.2:-17625626 | MS.gene83765:CDS |
| TTCAGTAGTTGTTGAATCTT+CGG | 0.360449 | 3.2:+17626156 | None:intergenic |
| ACTTTGGGAGATACTCATTT+GGG | 0.360641 | 3.2:-17626528 | MS.gene83765:CDS |
| TTCCAGGTTAAGGCCACTTT+GGG | 0.364020 | 3.2:-17626543 | MS.gene83765:CDS |
| TTATGTCTTGTTGGACTGAT+TGG | 0.374106 | 3.2:+17626967 | None:intergenic |
| AGCTGCTATTGCTTATGGTT+TGG | 0.376546 | 3.2:-17626664 | MS.gene83765:CDS |
| CACTTTGGGAGATACTCATT+TGG | 0.379211 | 3.2:-17626529 | MS.gene83765:CDS |
| GAGTGAGAATTCCAAAGCTT+TGG | 0.379223 | 3.2:-17626427 | MS.gene83765:CDS |
| ATGGGTTTGTCTTTGTGGTT+TGG | 0.379293 | 3.2:+17626921 | None:intergenic |
| ACTCATCAATTTCTGCCAAT+TGG | 0.383486 | 3.2:+17625473 | None:intergenic |
| TCCAACAAGACATAAGGTTT+TGG | 0.384795 | 3.2:-17626959 | MS.gene83765:CDS |
| ACCGACACTGAAAGATTAAT+AGG | 0.390230 | 3.2:-17627074 | MS.gene83765:CDS |
| AGGCAGAGGATGAGGAGGTT+AGG | 0.400721 | 3.2:-17625606 | MS.gene83765:CDS |
| TCTTAACCTCCCCAAAGCTT+TGG | 0.400779 | 3.2:+17626416 | None:intergenic |
| ACTCAACCTTCCCTCCTTGT+TGG | 0.402188 | 3.2:+17625672 | None:intergenic |
| CTTGTCTTTGATCTTGGTGG+TGG | 0.402810 | 3.2:-17626606 | MS.gene83765:CDS |
| GCCAAAACCTTATGTCTTGT+TGG | 0.404961 | 3.2:+17626958 | None:intergenic |
| GTTCATGAATTTGTTATTGT+CGG | 0.409000 | 3.2:-17626195 | MS.gene83765:CDS |
| TTTGATGCCAAACGTTTGAT+TGG | 0.412646 | 3.2:-17627005 | MS.gene83765:CDS |
| GTTCTTGTCTTTGATCTTGG+TGG | 0.414303 | 3.2:-17626609 | MS.gene83765:CDS |
| TTTGATCAAAACTTTACCTT+GGG | 0.431046 | 3.2:+17625882 | None:intergenic |
| AGAATTATGTTTATGAAATG+AGG | 0.432257 | 3.2:-17625555 | MS.gene83765:CDS |
| GTAGGGATCCTAGTATTCTT+CGG | 0.433514 | 3.2:+17625931 | None:intergenic |
| ATGAAATGAGGGAGAGAGTG+AGG | 0.434187 | 3.2:-17625543 | MS.gene83765:CDS |
| TTTGTAATTGACAACAATCA+TGG | 0.440479 | 3.2:+17626902 | None:intergenic |
| CTCCCAAAGTGGCCTTAACC+TGG | 0.442345 | 3.2:+17626541 | None:intergenic |
| TGTTGACGAAGGAATGTTCC+AGG | 0.444778 | 3.2:-17626559 | MS.gene83765:CDS |
| GTTCCAGGTTAAGGCCACTT+TGG | 0.448544 | 3.2:-17626544 | MS.gene83765:CDS |
| TCGGTGAAGGCAACGTAAGA+AGG | 0.448873 | 3.2:+17627092 | None:intergenic |
| GGATGAGGAGGTTAGGAAGA+AGG | 0.449706 | 3.2:-17625599 | MS.gene83765:CDS |
| GATTGAAGGCTTATTGCTGT+TGG | 0.451601 | 3.2:-17626013 | MS.gene83765:CDS |
| ATGCTCTTTAGTACCTAGAA+AGG | 0.452071 | 3.2:-17625794 | MS.gene83765:CDS |
| CCATAAGCCACAGCTTCATC+AGG | 0.453102 | 3.2:+17626081 | None:intergenic |
| ATCATTCTTCTCATCTCTTG+AGG | 0.461303 | 3.2:+17625649 | None:intergenic |
| AGTCTTGGTGTTGAAACTAA+AGG | 0.463181 | 3.2:-17625976 | MS.gene83765:CDS |
| TATGAAATAATTCAACAAGA+TGG | 0.465475 | 3.2:+17626475 | None:intergenic |
| ACTGCTGAAGATAAGACAAA+AGG | 0.472237 | 3.2:-17625718 | MS.gene83765:CDS |
| GCGGTATAAGGCAGAGGATG+AGG | 0.474792 | 3.2:-17625614 | MS.gene83765:CDS |
| CTTTGATCAAAACTTTACCT+TGG | 0.475667 | 3.2:+17625881 | None:intergenic |
| TGTGATTTGTTGAAGTAAGC+AGG | 0.482100 | 3.2:+17626759 | None:intergenic |
| GCGATGACCAATCAAACGTT+TGG | 0.484985 | 3.2:+17626998 | None:intergenic |
| AGGAGAACATGCTAAGACTA+AGG | 0.487241 | 3.2:-17625851 | MS.gene83765:CDS |
| GAGGAAGCTTGAAAAGGTAG+TGG | 0.489230 | 3.2:-17625524 | MS.gene83765:CDS |
| GAAGGAGACAAGAAGATTGA+AGG | 0.489825 | 3.2:-17626027 | MS.gene83765:CDS |
| TGAGTTTGAATTCAAGAAGC+AGG | 0.491801 | 3.2:-17625455 | MS.gene83765:CDS |
| TGAATTCAAGAAGCAGGAGT+TGG | 0.497584 | 3.2:-17625449 | MS.gene83765:CDS |
| GATCCTCATCACATTAAAAC+CGG | 0.502743 | 3.2:+17626704 | None:intergenic |
| GAGAGTGAGGAAGCTTGAAA+AGG | 0.502774 | 3.2:-17625530 | MS.gene83765:CDS |
| GAATTATGTTTATGAAATGA+GGG | 0.504803 | 3.2:-17625554 | MS.gene83765:CDS |
| ATGGCTTGACAGAAACCAAT+TGG | 0.505887 | 3.2:-17625488 | MS.gene83765:CDS |
| CTGCTGAAGATAAGACAAAA+GGG | 0.507869 | 3.2:-17625717 | MS.gene83765:CDS |
| AATCAGTCCAACAAGACATA+AGG | 0.516258 | 3.2:-17626965 | MS.gene83765:CDS |
| AAGGGGTGACACGGTTCCCT+TGG | 0.517703 | 3.2:+17627111 | None:intergenic |
| TGTACCAAGGTCAATGCCTA+TGG | 0.520221 | 3.2:+17627190 | None:intergenic |
| ACCTATTAATCTTTCAGTGT+CGG | 0.522436 | 3.2:+17627073 | None:intergenic |
| CATGAATTTGTTATTGTCGG+AGG | 0.522698 | 3.2:-17626192 | MS.gene83765:CDS |
| TTGTAATTGACAACAATCAT+GGG | 0.527199 | 3.2:+17626903 | None:intergenic |
| AGCTTGATTCACTATGTGAA+GGG | 0.532350 | 3.2:-17626338 | MS.gene83765:CDS |
| CAAAACTTTACCTTGGGCTG+TGG | 0.533300 | 3.2:+17625888 | None:intergenic |
| CGGTGAAGGCAACGTAAGAA+GGG | 0.538770 | 3.2:+17627093 | None:intergenic |
| TAGTGGAGGAAAGTATAGAA+TGG | 0.539580 | 3.2:-17625507 | MS.gene83765:CDS |
| TCCTTCGTCAACAGTCACTA+AGG | 0.546693 | 3.2:+17626569 | None:intergenic |
| TGCCGAGCGGTATAAGGCAG+AGG | 0.550389 | 3.2:-17625620 | MS.gene83765:CDS |
| ACCTCAAGAGATATCTTCCA+TGG | 0.553297 | 3.2:-17626859 | MS.gene83765:CDS |
| ATGAATTTGTTATTGTCGGA+GGG | 0.553906 | 3.2:-17626191 | MS.gene83765:CDS |
| ATTTCATAGAAAGTACAAGA+AGG | 0.557642 | 3.2:-17626460 | MS.gene83765:CDS |
| ATCCTCTGCCTTATACCGCT+CGG | 0.563812 | 3.2:+17625618 | None:intergenic |
| TAATCTTTCAGTGTCGGTGA+AGG | 0.565703 | 3.2:+17627079 | None:intergenic |
| GCAGCAATATTGAATACTGA+AGG | 0.571285 | 3.2:-17626045 | MS.gene83765:CDS |
| TTGGGAGATACTCATTTGGG+TGG | 0.571754 | 3.2:-17626525 | MS.gene83765:CDS |
| GAAGATTCAACAACTACTGA+AGG | 0.574421 | 3.2:-17626154 | MS.gene83765:CDS |
| GACAAGAAAATGTGGAGAGA+AGG | 0.578701 | 3.2:-17626642 | MS.gene83765:CDS |
| ATGATTGTTGTCAATTACAA+AGG | 0.584826 | 3.2:-17626900 | MS.gene83765:CDS |
| AGACAAGCTACAAAAGATGC+AGG | 0.588448 | 3.2:-17626735 | MS.gene83765:CDS |
| ATCATTATCACCAACAAGGA+GGG | 0.590966 | 3.2:-17625682 | MS.gene83765:CDS |
| AGAGATGAGAAGAATGATGA+GGG | 0.595789 | 3.2:-17625644 | MS.gene83765:CDS |
| GAAGCTTGAAAAGGTAGTGG+AGG | 0.595927 | 3.2:-17625521 | MS.gene83765:CDS |
| AAGGAAATGTTTAGTGTCAA+CGG | 0.596200 | 3.2:-17626135 | MS.gene83765:CDS |
| TGTGGAGAAGTGTTTGATTG+AGG | 0.604035 | 3.2:-17626238 | MS.gene83765:CDS |
| TACAGCTGTAGCTTGTACCA+AGG | 0.607846 | 3.2:+17627177 | None:intergenic |
| AGAATTCCAAAGCTTTGGGG+AGG | 0.611200 | 3.2:-17626422 | MS.gene83765:CDS |
| CATTAATCCTGATGAAGCTG+TGG | 0.613030 | 3.2:-17626088 | MS.gene83765:CDS |
| TAAGCAATAGCAGCTGCAGT+AGG | 0.618882 | 3.2:+17626672 | None:intergenic |
| AAGAGATGAGAAGAATGATG+AGG | 0.628540 | 3.2:-17625645 | MS.gene83765:CDS |
| CAACGTAAGAAGGGGTGACA+CGG | 0.629570 | 3.2:+17627102 | None:intergenic |
| AGATCATTCCAAACGACCAA+GGG | 0.630317 | 3.2:-17627127 | MS.gene83765:CDS |
| GAGATCATTCCAAACGACCA+AGG | 0.630381 | 3.2:-17627128 | MS.gene83765:CDS |
| ATGGTTTGGACAAGAAAATG+TGG | 0.630603 | 3.2:-17626650 | MS.gene83765:CDS |
| GTGAGAATTCCAAAGCTTTG+GGG | 0.633277 | 3.2:-17626425 | MS.gene83765:CDS |
| TTATCACCAACAAGGAGGGA+AGG | 0.634341 | 3.2:-17625678 | MS.gene83765:CDS |
| GAGCTTGATTCACTATGTGA+AGG | 0.634799 | 3.2:-17626339 | MS.gene83765:CDS |
| CAAATGAGTATCTCCCAAAG+TGG | 0.637746 | 3.2:+17626530 | None:intergenic |
| AAAGCCATAGGCATTGACCT+TGG | 0.638972 | 3.2:-17627194 | MS.gene83765:CDS |
| TCCTTAGTGACTGTTGACGA+AGG | 0.640013 | 3.2:-17626570 | MS.gene83765:CDS |
| ACCATGGAAGATATCTCTTG+AGG | 0.641800 | 3.2:+17626858 | None:intergenic |
| GTATAAGGCAGAGGATGAGG+AGG | 0.650304 | 3.2:-17625611 | MS.gene83765:CDS |
| CAGCATGCGAGAAAGCAAAG+AGG | 0.658762 | 3.2:-17626392 | MS.gene83765:CDS |
| GGTGAAGGCAACGTAAGAAG+GGG | 0.669245 | 3.2:+17627094 | None:intergenic |
| GATCATTATCACCAACAAGG+AGG | 0.670278 | 3.2:-17625683 | MS.gene83765:CDS |
| CTTTAATTTAGACAACACCA+TGG | 0.682894 | 3.2:+17626842 | None:intergenic |
| CAGAAAGTGCATGAAGACTG+TGG | 0.701540 | 3.2:-17626256 | MS.gene83765:CDS |
| CTTGGTGTTGAAACTAAAGG+TGG | 0.707841 | 3.2:-17625973 | MS.gene83765:CDS |
| GAATGATGAGGGATGCCGAG+CGG | 0.719182 | 3.2:-17625633 | MS.gene83765:CDS |
| GAAGATCATTATCACCAACA+AGG | 0.723817 | 3.2:-17625686 | MS.gene83765:CDS |
| GCTACAGCTGTATTGCAGTG+TGG | 0.732257 | 3.2:-17627166 | MS.gene83765:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAACAAATATTGATATT+TGG | + | chr3.2:17626872-17626891 | None:intergenic | 15.0% |
| !! | AGAATTATGTTTATGAAATG+AGG | - | chr3.2:17627083-17627102 | MS.gene83765:CDS | 20.0% |
| !! | GAATTATGTTTATGAAATGA+GGG | - | chr3.2:17627084-17627103 | MS.gene83765:CDS | 20.0% |
| !! | TATGAAATAATTCAACAAGA+TGG | + | chr3.2:17626166-17626185 | None:intergenic | 20.0% |
| !!! | TGTTGATTTTGATAACAATT+TGG | - | chr3.2:17626136-17626155 | MS.gene83765:CDS | 20.0% |
| !!! | TTTTTTTGAGGAAATAAACA+AGG | - | chr3.2:17626352-17626371 | MS.gene83765:CDS | 20.0% |
| ! | ATGATTGTTGTCAATTACAA+AGG | - | chr3.2:17625738-17625757 | MS.gene83765:CDS | 25.0% |
| ! | GAAATTGCTGAAACTTATTT+GGG | - | chr3.2:17625819-17625838 | MS.gene83765:CDS | 25.0% |
| ! | TTGTAATTGACAACAATCAT+GGG | + | chr3.2:17625738-17625757 | None:intergenic | 25.0% |
| ! | TTTGATCAAAACTTTACCTT+GGG | + | chr3.2:17626759-17626778 | None:intergenic | 25.0% |
| ! | TTTGTAATTGACAACAATCA+TGG | + | chr3.2:17625739-17625758 | None:intergenic | 25.0% |
| !! | ATTTCATAGAAAGTACAAGA+AGG | - | chr3.2:17626178-17626197 | MS.gene83765:CDS | 25.0% |
| !! | TGTTGATGTTAATGGAATTT+TGG | - | chr3.2:17626892-17626911 | MS.gene83765:CDS | 25.0% |
| !!! | AAAACATTCTCCTTTTTTGT+AGG | + | chr3.2:17626728-17626747 | None:intergenic | 25.0% |
| !!! | AAACATTCTCCTTTTTTGTA+GGG | + | chr3.2:17626727-17626746 | None:intergenic | 25.0% |
| !!! | GTTCATGAATTTGTTATTGT+CGG | - | chr3.2:17626443-17626462 | MS.gene83765:CDS | 25.0% |
| !!! | TGTTTTGATGTTGATGTTAA+TGG | - | chr3.2:17626884-17626903 | MS.gene83765:CDS | 25.0% |
| AAGGAAATGTTTAGTGTCAA+CGG | - | chr3.2:17626503-17626522 | MS.gene83765:CDS | 30.0% | |
| AATGTTCTTGTCTTTGATCT+TGG | - | chr3.2:17626026-17626045 | MS.gene83765:CDS | 30.0% | |
| ACCTATTAATCTTTCAGTGT+CGG | + | chr3.2:17625568-17625587 | None:intergenic | 30.0% | |
| CTTTGATCAAAACTTTACCT+TGG | + | chr3.2:17626760-17626779 | None:intergenic | 30.0% | |
| GGAAATTGCTGAAACTTATT+TGG | - | chr3.2:17625818-17625837 | MS.gene83765:CDS | 30.0% | |
| TTCAGTAGTTGTTGAATCTT+CGG | + | chr3.2:17626485-17626504 | None:intergenic | 30.0% | |
| ! | CTTTAATTTAGACAACACCA+TGG | + | chr3.2:17625799-17625818 | None:intergenic | 30.0% |
| ! | GAGGTGAAAAATGTTTTTCT+TGG | + | chr3.2:17625764-17625783 | None:intergenic | 30.0% |
| ! | TGATGTTAATGGAATTTTGG+AGG | - | chr3.2:17626895-17626914 | MS.gene83765:CDS | 30.0% |
| ! | TTGATATTTGGAACCTTTCT+AGG | + | chr3.2:17626860-17626879 | None:intergenic | 30.0% |
| !! | ATGAATTTGTTATTGTCGGA+GGG | - | chr3.2:17626447-17626466 | MS.gene83765:CDS | 30.0% |
| !! | CATGGTGTTGTCTAAATTAA+AGG | - | chr3.2:17625797-17625816 | MS.gene83765:CDS | 30.0% |
| !! | GTTTTGATCAAAGTCTATGA+AGG | - | chr3.2:17626767-17626786 | MS.gene83765:CDS | 30.0% |
| !! | TTTTGATTCCGAAGAATACT+AGG | - | chr3.2:17626699-17626718 | MS.gene83765:CDS | 30.0% |
| !!! | ATTTTTGGCTGATTGGTTTA+TGG | + | chr3.2:17625598-17625617 | None:intergenic | 30.0% |
| !!! | TGTTACTAGAGCTTTTTTTG+AGG | - | chr3.2:17626340-17626359 | MS.gene83765:CDS | 30.0% |
| AAAGATGCAGGAAAAATTGC+CGG | - | chr3.2:17625915-17625934 | MS.gene83765:CDS | 35.0% | |
| AAGAGATGAGAAGAATGATG+AGG | - | chr3.2:17626993-17627012 | MS.gene83765:CDS | 35.0% | |
| AATCAGTCCAACAAGACATA+AGG | - | chr3.2:17625673-17625692 | MS.gene83765:CDS | 35.0% | |
| ACAAGAAAAAGCAAAGCCAT+AGG | - | chr3.2:17625432-17625451 | MS.gene83765:CDS | 35.0% | |
| ACCGACACTGAAAGATTAAT+AGG | - | chr3.2:17625564-17625583 | MS.gene83765:CDS | 35.0% | |
| ACTCATCAATTTCTGCCAAT+TGG | + | chr3.2:17627168-17627187 | None:intergenic | 35.0% | |
| ACTGCTGAAGATAAGACAAA+AGG | - | chr3.2:17626920-17626939 | MS.gene83765:CDS | 35.0% | |
| AGAGATGAGAAGAATGATGA+GGG | - | chr3.2:17626994-17627013 | MS.gene83765:CDS | 35.0% | |
| AGCTTGATTCACTATGTGAA+GGG | - | chr3.2:17626300-17626319 | MS.gene83765:CDS | 35.0% | |
| AGTGAGAATTCCAAAGCTTT+GGG | - | chr3.2:17626212-17626231 | MS.gene83765:CDS | 35.0% | |
| ATCATTATCACCAACAAGGA+GGG | - | chr3.2:17626956-17626975 | MS.gene83765:CDS | 35.0% | |
| ATCATTCTTCTCATCTCTTG+AGG | + | chr3.2:17626992-17627011 | None:intergenic | 35.0% | |
| ATGCTCTTTAGTACCTAGAA+AGG | - | chr3.2:17626844-17626863 | MS.gene83765:CDS | 35.0% | |
| CAAACGTTTGGCATCAAAAA+CGG | + | chr3.2:17625631-17625650 | None:intergenic | 35.0% | |
| CTGCTGAAGATAAGACAAAA+GGG | - | chr3.2:17626921-17626940 | MS.gene83765:CDS | 35.0% | |
| GAAGATCATTATCACCAACA+AGG | - | chr3.2:17626952-17626971 | MS.gene83765:CDS | 35.0% | |
| GAAGATTCAACAACTACTGA+AGG | - | chr3.2:17626484-17626503 | MS.gene83765:CDS | 35.0% | |
| GATCCTCATCACATTAAAAC+CGG | + | chr3.2:17625937-17625956 | None:intergenic | 35.0% | |
| GCAGCAATATTGAATACTGA+AGG | - | chr3.2:17626593-17626612 | MS.gene83765:CDS | 35.0% | |
| GTTTCAACACCAAGACTAAA+AGG | + | chr3.2:17626659-17626678 | None:intergenic | 35.0% | |
| TACTAGGATCCCTACAAAAA+AGG | - | chr3.2:17626715-17626734 | MS.gene83765:CDS | 35.0% | |
| TGAGTTTGAATTCAAGAAGC+AGG | - | chr3.2:17627183-17627202 | MS.gene83765:CDS | 35.0% | |
| TTTGATGCCAAACGTTTGAT+TGG | - | chr3.2:17625633-17625652 | MS.gene83765:CDS | 35.0% | |
| ! | ACTAAGGACAACTTTTTGCT+TGG | - | chr3.2:17626803-17626822 | MS.gene83765:CDS | 35.0% |
| ! | ACTTTGGGAGATACTCATTT+GGG | - | chr3.2:17626110-17626129 | MS.gene83765:CDS | 35.0% |
| ! | ATGGTTTGGACAAGAAAATG+TGG | - | chr3.2:17625988-17626007 | MS.gene83765:CDS | 35.0% |
| ! | GATGTTATGCCTTTTAGTCT+TGG | - | chr3.2:17626647-17626666 | MS.gene83765:CDS | 35.0% |
| ! | TAGTGGAGGAAAGTATAGAA+TGG | - | chr3.2:17627131-17627150 | MS.gene83765:CDS | 35.0% |
| ! | TCAGGATTAATGCTTTTGCA+AGG | + | chr3.2:17626542-17626561 | None:intergenic | 35.0% |
| ! | TCCAACAAGACATAAGGTTT+TGG | - | chr3.2:17625679-17625698 | MS.gene83765:CDS | 35.0% |
| ! | TGGTTTGGAACAACCTTAAA+AGG | + | chr3.2:17625705-17625724 | None:intergenic | 35.0% |
| ! | TTATGTCTTGTTGGACTGAT+TGG | + | chr3.2:17625674-17625693 | None:intergenic | 35.0% |
| !! | AGTCTTGGTGTTGAAACTAA+AGG | - | chr3.2:17626662-17626681 | MS.gene83765:CDS | 35.0% |
| !! | CATAAGGTTTTGGCCTTTTA+AGG | - | chr3.2:17625689-17625708 | MS.gene83765:CDS | 35.0% |
| !! | CATGAATTTGTTATTGTCGG+AGG | - | chr3.2:17626446-17626465 | MS.gene83765:CDS | 35.0% |
| !! | TGTGATTTGTTGAAGTAAGC+AGG | + | chr3.2:17625882-17625901 | None:intergenic | 35.0% |
| ACCATGGAAGATATCTCTTG+AGG | + | chr3.2:17625783-17625802 | None:intergenic | 40.0% | |
| ACCTCAAGAGATATCTTCCA+TGG | - | chr3.2:17625779-17625798 | MS.gene83765:CDS | 40.0% | |
| AGACAAGCTACAAAAGATGC+AGG | - | chr3.2:17625903-17625922 | MS.gene83765:CDS | 40.0% | |
| AGATCATTCCAAACGACCAA+GGG | - | chr3.2:17625511-17625530 | MS.gene83765:CDS | 40.0% | |
| AGCTGCTATTGCTTATGGTT+TGG | - | chr3.2:17625974-17625993 | MS.gene83765:CDS | 40.0% | |
| AGGAGAACATGCTAAGACTA+AGG | - | chr3.2:17626787-17626806 | MS.gene83765:CDS | 40.0% | |
| ATGGCTTGACAGAAACCAAT+TGG | - | chr3.2:17627150-17627169 | MS.gene83765:CDS | 40.0% | |
| ATGGGTTTGTCTTTGTGGTT+TGG | + | chr3.2:17625720-17625739 | None:intergenic | 40.0% | |
| CAAATGAGTATCTCCCAAAG+TGG | + | chr3.2:17626111-17626130 | None:intergenic | 40.0% | |
| CAATCATGGGTTTGTCTTTG+TGG | + | chr3.2:17625725-17625744 | None:intergenic | 40.0% | |
| CATTAATCCTGATGAAGCTG+TGG | - | chr3.2:17626550-17626569 | MS.gene83765:CDS | 40.0% | |
| GAAGGAGACAAGAAGATTGA+AGG | - | chr3.2:17626611-17626630 | MS.gene83765:CDS | 40.0% | |
| GACAAGAAAATGTGGAGAGA+AGG | - | chr3.2:17625996-17626015 | MS.gene83765:CDS | 40.0% | |
| GAGCTTGATTCACTATGTGA+AGG | - | chr3.2:17626299-17626318 | MS.gene83765:CDS | 40.0% | |
| GAGTGAGAATTCCAAAGCTT+TGG | - | chr3.2:17626211-17626230 | MS.gene83765:CDS | 40.0% | |
| GATCATTATCACCAACAAGG+AGG | - | chr3.2:17626955-17626974 | MS.gene83765:CDS | 40.0% | |
| GATTGAAGGCTTATTGCTGT+TGG | - | chr3.2:17626625-17626644 | MS.gene83765:CDS | 40.0% | |
| GCCAAAACCTTATGTCTTGT+TGG | + | chr3.2:17625683-17625702 | None:intergenic | 40.0% | |
| GTAGGGATCCTAGTATTCTT+CGG | + | chr3.2:17626710-17626729 | None:intergenic | 40.0% | |
| GTGAGAATTCCAAAGCTTTG+GGG | - | chr3.2:17626213-17626232 | MS.gene83765:CDS | 40.0% | |
| GTTCTTGTCTTTGATCTTGG+TGG | - | chr3.2:17626029-17626048 | MS.gene83765:CDS | 40.0% | |
| TGAATTCAAGAAGCAGGAGT+TGG | - | chr3.2:17627189-17627208 | MS.gene83765:CDS | 40.0% | |
| ! | CACTTTGGGAGATACTCATT+TGG | - | chr3.2:17626109-17626128 | MS.gene83765:CDS | 40.0% |
| !! | CTTGGTGTTGAAACTAAAGG+TGG | - | chr3.2:17626665-17626684 | MS.gene83765:CDS | 40.0% |
| !! | TAATCTTTCAGTGTCGGTGA+AGG | + | chr3.2:17625562-17625581 | None:intergenic | 40.0% |
| !! | TGTGGAGAAGTGTTTGATTG+AGG | - | chr3.2:17626400-17626419 | MS.gene83765:CDS | 40.0% |
| !!! | AACGGTGTTGTGTGGATTTT+TGG | + | chr3.2:17625613-17625632 | None:intergenic | 40.0% |
| !!! | TGTGTGGATTTTTGGCTGAT+TGG | + | chr3.2:17625605-17625624 | None:intergenic | 40.0% |
| !!! | TTGCCGGTTTTAATGTGATG+AGG | - | chr3.2:17625931-17625950 | MS.gene83765:CDS | 40.0% |
| ACTGCAGCTGCTATTGCTTA+TGG | - | chr3.2:17625969-17625988 | MS.gene83765:CDS | 45.0% | |
| ATGAAATGAGGGAGAGAGTG+AGG | - | chr3.2:17627095-17627114 | MS.gene83765:CDS | 45.0% | |
| CAAAACTTTACCTTGGGCTG+TGG | + | chr3.2:17626753-17626772 | None:intergenic | 45.0% | |
| CGAAGGAATGTTCCAGGTTA+AGG | - | chr3.2:17626085-17626104 | MS.gene83765:CDS | 45.0% | |
| CTTGTCTTTGATCTTGGTGG+TGG | - | chr3.2:17626032-17626051 | MS.gene83765:CDS | 45.0% | |
| GAGAGTGAGGAAGCTTGAAA+AGG | - | chr3.2:17627108-17627127 | MS.gene83765:CDS | 45.0% | |
| GAGATCATTCCAAACGACCA+AGG | - | chr3.2:17625510-17625529 | MS.gene83765:CDS | 45.0% | |
| GAGGAAGCTTGAAAAGGTAG+TGG | - | chr3.2:17627114-17627133 | MS.gene83765:CDS | 45.0% | |
| GCGATGACCAATCAAACGTT+TGG | + | chr3.2:17625643-17625662 | None:intergenic | 45.0% | |
| TAAGCAATAGCAGCTGCAGT+AGG | + | chr3.2:17625969-17625988 | None:intergenic | 45.0% | |
| TCCTTAGTGACTGTTGACGA+AGG | - | chr3.2:17626068-17626087 | MS.gene83765:CDS | 45.0% | |
| TCCTTCGTCAACAGTCACTA+AGG | + | chr3.2:17626072-17626091 | None:intergenic | 45.0% | |
| TCTTAACCTCCCCAAAGCTT+TGG | + | chr3.2:17626225-17626244 | None:intergenic | 45.0% | |
| TGTACCAAGGTCAATGCCTA+TGG | + | chr3.2:17625451-17625470 | None:intergenic | 45.0% | |
| TGTTGACGAAGGAATGTTCC+AGG | - | chr3.2:17626079-17626098 | MS.gene83765:CDS | 45.0% | |
| TTATCACCAACAAGGAGGGA+AGG | - | chr3.2:17626960-17626979 | MS.gene83765:CDS | 45.0% | |
| TTGGGAGATACTCATTTGGG+TGG | - | chr3.2:17626113-17626132 | MS.gene83765:CDS | 45.0% | |
| ! | AATGTTTTCTCCACAGCCCA+AGG | - | chr3.2:17626740-17626759 | MS.gene83765:CDS | 45.0% |
| ! | CAGAAAGTGCATGAAGACTG+TGG | - | chr3.2:17626382-17626401 | MS.gene83765:CDS | 45.0% |
| ! | GAAGCTTGAAAAGGTAGTGG+AGG | - | chr3.2:17627117-17627136 | MS.gene83765:CDS | 45.0% |
| ! | TACAGCTGTAGCTTGTACCA+AGG | + | chr3.2:17625464-17625483 | None:intergenic | 45.0% |
| ! | TTCCAGGTTAAGGCCACTTT+GGG | - | chr3.2:17626095-17626114 | MS.gene83765:CDS | 45.0% |
| !! | AAAGCCATAGGCATTGACCT+TGG | - | chr3.2:17625444-17625463 | MS.gene83765:CDS | 45.0% |
| !! | AGAATTCCAAAGCTTTGGGG+AGG | - | chr3.2:17626216-17626235 | MS.gene83765:CDS | 45.0% |
| !! | GCATCAAAAACGGTGTTGTG+TGG | + | chr3.2:17625621-17625640 | None:intergenic | 45.0% |
| ACTCAACCTTCCCTCCTTGT+TGG | + | chr3.2:17626969-17626988 | None:intergenic | 50.0% | |
| ATCCTCTGCCTTATACCGCT+CGG | + | chr3.2:17627023-17627042 | None:intergenic | 50.0% | |
| CAACGTAAGAAGGGGTGACA+CGG | + | chr3.2:17625539-17625558 | None:intergenic | 50.0% | |
| CAGCATGCGAGAAAGCAAAG+AGG | - | chr3.2:17626246-17626265 | MS.gene83765:CDS | 50.0% | |
| CCATAAGCCACAGCTTCATC+AGG | + | chr3.2:17626560-17626579 | None:intergenic | 50.0% | |
| CCTGATGAAGCTGTGGCTTA+TGG | - | chr3.2:17626557-17626576 | MS.gene83765:CDS | 50.0% | |
| CGGTGAAGGCAACGTAAGAA+GGG | + | chr3.2:17625548-17625567 | None:intergenic | 50.0% | |
| GCTACAGCTGTATTGCAGTG+TGG | - | chr3.2:17625472-17625491 | MS.gene83765:CDS | 50.0% | |
| GGATGAGGAGGTTAGGAAGA+AGG | - | chr3.2:17627039-17627058 | MS.gene83765:CDS | 50.0% | |
| GGTGAAGGCAACGTAAGAAG+GGG | + | chr3.2:17625547-17625566 | None:intergenic | 50.0% | |
| GTATAAGGCAGAGGATGAGG+AGG | - | chr3.2:17627027-17627046 | MS.gene83765:CDS | 50.0% | |
| GTTCCAGGTTAAGGCCACTT+TGG | - | chr3.2:17626094-17626113 | MS.gene83765:CDS | 50.0% | |
| TCGGTGAAGGCAACGTAAGA+AGG | + | chr3.2:17625549-17625568 | None:intergenic | 50.0% | |
| ACACGGTTCCCTTGGTCGTT+TGG | + | chr3.2:17625522-17625541 | None:intergenic | 55.0% | |
| AGGCAGAGGATGAGGAGGTT+AGG | - | chr3.2:17627032-17627051 | MS.gene83765:CDS | 55.0% | |
| GAATGATGAGGGATGCCGAG+CGG | - | chr3.2:17627005-17627024 | MS.gene83765:CDS | 55.0% | |
| GCGGTATAAGGCAGAGGATG+AGG | - | chr3.2:17627024-17627043 | MS.gene83765:CDS | 55.0% | |
| ! | CTCCCAAAGTGGCCTTAACC+TGG | + | chr3.2:17626100-17626119 | None:intergenic | 55.0% |
| AAGGGGTGACACGGTTCCCT+TGG | + | chr3.2:17625530-17625549 | None:intergenic | 60.0% | |
| GAGGGATGCCGAGCGGTATA+AGG | - | chr3.2:17627012-17627031 | MS.gene83765:CDS | 60.0% | |
| TGCCGAGCGGTATAAGGCAG+AGG | - | chr3.2:17627018-17627037 | MS.gene83765:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 17625426 | 17627234 | 17625426 | ID=MS.gene83765 |
| chr3.2 | mRNA | 17625426 | 17627234 | 17625426 | ID=MS.gene83765.t1;Parent=MS.gene83765 |
| chr3.2 | exon | 17625426 | 17627234 | 17625426 | ID=MS.gene83765.t1.exon1;Parent=MS.gene83765.t1 |
| chr3.2 | CDS | 17625426 | 17627234 | 17625426 | ID=cds.MS.gene83765.t1;Parent=MS.gene83765.t1 |
| Gene Sequence |
| Protein sequence |
