Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84158.t1 | ABN05850.1 | 96.7 | 610 | 20 | 0 | 1 | 610 | 1 | 610 | 0.00E+00 | 1119.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84158.t1 | Q9ZPI1 | 77.2 | 526 | 119 | 1 | 67 | 592 | 85 | 609 | 1.3e-244 | 847.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84158.t1 | A2Q1N3 | 96.7 | 610 | 20 | 0 | 1 | 610 | 1 | 610 | 0.0e+00 | 1119.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050252 | MS.gene84158 | 0.841303 | 5.16E-58 | -1.69E-46 |
MS.gene054624 | MS.gene84158 | 0.81905 | 1.42E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047341 | MS.gene84158 | PPI |
MS.gene64893 | MS.gene84158 | PPI |
MS.gene86542 | MS.gene84158 | PPI |
MS.gene01051 | MS.gene84158 | PPI |
MS.gene84158 | MS.gene002488 | PPI |
MS.gene01460 | MS.gene84158 | PPI |
MS.gene65334 | MS.gene84158 | PPI |
MS.gene72661 | MS.gene84158 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84158.t1 | MTR_2g036600 | 96.689 | 604 | 20 | 0 | 1 | 604 | 1 | 604 | 0.0 | 1229 |
MS.gene84158.t1 | MTR_2g036600 | 96.288 | 458 | 17 | 0 | 147 | 604 | 6 | 463 | 0.0 | 928 |
MS.gene84158.t1 | MTR_4g127770 | 79.354 | 557 | 103 | 3 | 47 | 597 | 534 | 1084 | 0.0 | 920 |
MS.gene84158.t1 | MTR_4g127770 | 75.688 | 436 | 101 | 2 | 101 | 534 | 102 | 534 | 0.0 | 671 |
MS.gene84158.t1 | MTR_4g127770 | 67.059 | 85 | 24 | 2 | 453 | 534 | 4 | 87 | 1.43e-24 | 109 |
MS.gene84158.t1 | MTR_4g127790 | 80.759 | 395 | 70 | 1 | 209 | 597 | 1 | 395 | 0.0 | 670 |
MS.gene84158.t1 | MTR_8g007295 | 36.563 | 547 | 282 | 10 | 76 | 593 | 67 | 577 | 1.58e-110 | 343 |
MS.gene84158.t1 | MTR_8g007295 | 33.488 | 430 | 239 | 8 | 76 | 494 | 67 | 460 | 5.65e-72 | 239 |
MS.gene84158.t1 | MTR_2g061670 | 57.303 | 89 | 28 | 2 | 494 | 582 | 33 | 111 | 9.55e-22 | 92.0 |
MS.gene84158.t1 | MTR_1g014140 | 23.469 | 490 | 326 | 15 | 109 | 588 | 83 | 533 | 1.65e-21 | 99.0 |
MS.gene84158.t1 | MTR_2g021780 | 38.583 | 127 | 69 | 2 | 53 | 179 | 27 | 144 | 2.17e-18 | 82.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84158.t1 | AT3G11710 | 76.091 | 573 | 136 | 1 | 20 | 592 | 38 | 609 | 0.0 | 890 |
MS.gene84158.t1 | AT3G13490 | 37.794 | 553 | 270 | 13 | 76 | 593 | 88 | 601 | 5.00e-109 | 340 |
MS.gene84158.t1 | AT4G26870 | 24.800 | 500 | 320 | 16 | 107 | 588 | 63 | 524 | 3.95e-25 | 110 |
MS.gene84158.t1 | AT3G30805 | 67.606 | 71 | 19 | 2 | 535 | 601 | 71 | 141 | 2.73e-24 | 100 |
MS.gene84158.t1 | AT4G31180 | 22.968 | 566 | 367 | 20 | 37 | 588 | 40 | 550 | 2.95e-18 | 89.0 |
MS.gene84158.t1 | AT4G31180 | 22.968 | 566 | 367 | 20 | 37 | 588 | 40 | 550 | 2.95e-18 | 89.0 |
MS.gene84158.t1 | AT4G33760 | 27.273 | 165 | 111 | 3 | 227 | 383 | 42 | 205 | 3.28e-12 | 69.7 |
MS.gene84158.t1 | AT4G33760 | 27.273 | 165 | 111 | 3 | 227 | 383 | 178 | 341 | 4.25e-12 | 69.7 |
Find 164 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAACCTGTAAATGATTTAAT+TGG | 0.136876 | 2.3:+52083910 | None:intergenic |
ATGAAATTGGAAAACAATTT+AGG | 0.158648 | 2.3:-52086107 | MS.gene84158:CDS |
TGAAACAACTGCGCGTTTAT+TGG | 0.169597 | 2.3:-52085554 | MS.gene84158:CDS |
CTGAACCGTGTTTATGAAAT+TGG | 0.191056 | 2.3:-52086120 | MS.gene84158:CDS |
GGATAAGAGAATTACCTTTC+TGG | 0.195126 | 2.3:+52089886 | None:intergenic |
CCAACTGCTGGTTGGGGTTT+GGG | 0.197534 | 2.3:-52084111 | MS.gene84158:CDS |
AGCTGCAGGTTTGTTCTCTT+TGG | 0.220809 | 2.3:+52089173 | None:intergenic |
ACCAACTGCTGGTTGGGGTT+TGG | 0.235019 | 2.3:-52084112 | MS.gene84158:CDS |
TCTGGAAAAGCTTGATTTCT+TGG | 0.255435 | 2.3:-52086368 | MS.gene84158:CDS |
GTCCCAATTAAATCATTTAC+AGG | 0.260995 | 2.3:-52083913 | MS.gene84158:CDS |
TTCAGCGCTCGTCAAGTCTT+TGG | 0.273924 | 2.3:+52085633 | None:intergenic |
AGACAGCACCACAAAAGTTT+TGG | 0.284056 | 2.3:+52087490 | None:intergenic |
CTAAAATCATTTCTTATGTT+AGG | 0.308337 | 2.3:-52086396 | MS.gene84158:CDS |
GCAGAGAATTTGTGTGGATA+TGG | 0.310269 | 2.3:+52088966 | None:intergenic |
TCGGGATTCCTGGTCTTTCC+TGG | 0.312552 | 2.3:+52087401 | None:intergenic |
TGATGATGGTTTCAAGGTTC+AGG | 0.319939 | 2.3:-52088705 | MS.gene84158:CDS |
AGTGTATGCTTCGGGATTCC+TGG | 0.320278 | 2.3:+52087391 | None:intergenic |
AATAAACGCGCAGTTGTTTC+AGG | 0.321676 | 2.3:+52085556 | None:intergenic |
TTTGCCACCAACTGCTGGTT+GGG | 0.328326 | 2.3:-52084118 | MS.gene84158:CDS |
CCCGCGGCGGGAGCGGTGAC+CGG | 0.332532 | 2.3:+52090106 | None:intergenic |
CACGACATCTTGAGGTTTCA+TGG | 0.333865 | 2.3:+52083935 | None:intergenic |
TGGTTTCAAGGTTCAGGTTA+TGG | 0.336276 | 2.3:-52088699 | MS.gene84158:CDS |
TAGATACCGGTTACGCCATT+TGG | 0.338665 | 2.3:-52086464 | MS.gene84158:CDS |
GAAGCGTGAACAAAAGAAAA+AGG | 0.344883 | 2.3:-52089948 | MS.gene84158:CDS |
GTTGGCATCACAGGGTTTCC+AGG | 0.345455 | 2.3:-52088000 | MS.gene84158:intron |
TCGACTTTACTCCACCATTC+AGG | 0.346664 | 2.3:-52085792 | MS.gene84158:intron |
GCCAAAGGACTCATTATCTC+TGG | 0.349903 | 2.3:+52084544 | None:intergenic |
CAGAGGTTCGAGAAATATTC+AGG | 0.351833 | 2.3:-52086426 | MS.gene84158:CDS |
GGAGTAAAGTCGATTTCAAT+AGG | 0.352799 | 2.3:+52085802 | None:intergenic |
TCAGCGCTCGTCAAGTCTTT+GGG | 0.360897 | 2.3:+52085634 | None:intergenic |
CCTTCATGATGATGGTTTCA+AGG | 0.372840 | 2.3:-52088711 | MS.gene84158:CDS |
TCTTTCAGAGTGTATGCTTC+GGG | 0.379888 | 2.3:+52087383 | None:intergenic |
GTCTTTCAGAGTGTATGCTT+CGG | 0.386185 | 2.3:+52087382 | None:intergenic |
TGTTTAACTGCAGCAATACT+TGG | 0.390068 | 2.3:-52089036 | MS.gene84158:intron |
CTTATGGTTTCGCCCGCGGC+GGG | 0.395285 | 2.3:+52090094 | None:intergenic |
TCAAATCCAAATGGCGTAAC+CGG | 0.406882 | 2.3:+52086458 | None:intergenic |
AACCTGTAAATGATTTAATT+GGG | 0.410484 | 2.3:+52083911 | None:intergenic |
TGCAGCAATACTTGGAGAAC+AGG | 0.411482 | 2.3:-52089028 | MS.gene84158:intron |
AACTCACAGGTAGTAAATTC+AGG | 0.416154 | 2.3:+52086057 | None:intergenic |
AACTGCGCGTTTATTGGATA+AGG | 0.421321 | 2.3:-52085548 | MS.gene84158:intron |
CTGCTGCTGCTGATAATGCA+TGG | 0.425784 | 2.3:-52087427 | MS.gene84158:CDS |
CCGGTCACCGCTCCCGCCGC+GGG | 0.426816 | 2.3:-52090106 | MS.gene84158:CDS |
GGTTTCGCCCGCGGCGGGAG+CGG | 0.431701 | 2.3:+52090099 | None:intergenic |
AGAACTCTTTCTCAAGAAGT+TGG | 0.434467 | 2.3:-52086154 | MS.gene84158:CDS |
TCCGGTCACCGCTCCCGCCG+CGG | 0.435107 | 2.3:-52090107 | MS.gene84158:CDS |
AGCTGCTGATGAGGAAGATA+TGG | 0.435435 | 2.3:-52089154 | MS.gene84158:CDS |
GGTGATATTGTTGGCATCAC+AGG | 0.435627 | 2.3:-52088009 | MS.gene84158:CDS |
GACTGATTCACAAAATATCA+AGG | 0.437902 | 2.3:-52084064 | MS.gene84158:intron |
CTTGTTATATTGCAGCTTGT+GGG | 0.438111 | 2.3:-52084616 | MS.gene84158:intron |
GCATCTCAGGATCGGCAATC+AGG | 0.444447 | 2.3:-52084195 | MS.gene84158:intron |
CAGAGAATTTGTGTGGATAT+GGG | 0.448925 | 2.3:+52088967 | None:intergenic |
AAATCAGACTTAAATGAGGC+TGG | 0.449207 | 2.3:-52088063 | MS.gene84158:CDS |
CCAGCAATCATGTTCATCAT+AGG | 0.449515 | 2.3:+52086249 | None:intergenic |
TTTCTCAAGAAGTTGGTTGT+CGG | 0.457983 | 2.3:-52086147 | MS.gene84158:CDS |
AACTTCTTGAGAAAGAGTTC+TGG | 0.463364 | 2.3:+52086156 | None:intergenic |
TGGAAAACAATTTAGGAATG+AGG | 0.465055 | 2.3:-52086100 | MS.gene84158:CDS |
TAAGTATCTTGCAACTGAAA+AGG | 0.466073 | 2.3:-52089003 | MS.gene84158:CDS |
AGGACAGAGAAGAAGAAAAG+AGG | 0.469524 | 2.3:-52089928 | MS.gene84158:CDS |
TGCTGCTGCTGATAATGCAT+GGG | 0.470300 | 2.3:-52087426 | MS.gene84158:CDS |
AATCTTTGCCGTTGTACCAC+AGG | 0.473425 | 2.3:+52084341 | None:intergenic |
TCATTAAGTCATTGTAGTCC+TGG | 0.476452 | 2.3:+52086022 | None:intergenic |
ATCATGCACAAACGTTCCTC+TGG | 0.476919 | 2.3:-52088755 | MS.gene84158:CDS |
CCTATGATGAACATGATTGC+TGG | 0.480055 | 2.3:-52086249 | MS.gene84158:CDS |
GGAAAAGCTTGATTTCTTGG+AGG | 0.481870 | 2.3:-52086365 | MS.gene84158:intron |
TGAGTTCTACATGGCTTACC+AGG | 0.482987 | 2.3:-52086040 | MS.gene84158:CDS |
TCTTCCTCATCAGCAGCTGC+AGG | 0.483241 | 2.3:+52089159 | None:intergenic |
CGCGCAGTTGTTTCAGGAGG+GGG | 0.483338 | 2.3:+52085562 | None:intergenic |
TCGGAAGGAGGTTGTTCCAT+TGG | 0.483881 | 2.3:+52090133 | None:intergenic |
ACAACCTCCTTCCGATCCTC+CGG | 0.483944 | 2.3:-52090125 | MS.gene84158:CDS |
CCCAGAGATAATGAGTCCTT+TGG | 0.485249 | 2.3:-52084545 | MS.gene84158:CDS |
ACATCTTGAGGTTTCATGGC+AGG | 0.488702 | 2.3:+52083939 | None:intergenic |
CTTGCAACTGAAAAGGAAGA+AGG | 0.491377 | 2.3:-52088996 | MS.gene84158:CDS |
AGAAAAGAGGAGAAAGGACG+AGG | 0.495374 | 2.3:-52089915 | MS.gene84158:CDS |
CTCAAGAAGTTGGTTGTCGG+TGG | 0.497652 | 2.3:-52086144 | MS.gene84158:CDS |
TGAAGCTAATCAATATCTAA+AGG | 0.499766 | 2.3:-52085614 | MS.gene84158:CDS |
TACTACCTGTGAGTTCTACA+TGG | 0.502707 | 2.3:-52086049 | MS.gene84158:CDS |
ACAATTCAAAACGTTCAGTC+AGG | 0.503303 | 2.3:+52084497 | None:intergenic |
ATATTGTCTAATAGTAATAG+TGG | 0.503546 | 2.3:+52088944 | None:intergenic |
AGAAGGATTGACATGATTGA+AGG | 0.506536 | 2.3:-52085685 | MS.gene84158:CDS |
GGAAAACAATTTAGGAATGA+GGG | 0.509278 | 2.3:-52086099 | MS.gene84158:CDS |
AGAAGAAGAAAAGAGGAGAA+AGG | 0.512295 | 2.3:-52089921 | MS.gene84158:CDS |
CAAACCTGCAGCTGCTGATG+AGG | 0.516125 | 2.3:-52089163 | MS.gene84158:CDS |
TTGTTATATTGCAGCTTGTG+GGG | 0.518871 | 2.3:-52084615 | MS.gene84158:intron |
TATGGTTTGCCACCAACTGC+TGG | 0.519190 | 2.3:-52084123 | MS.gene84158:CDS |
GCTGATAATGCATGGGTACC+AGG | 0.520196 | 2.3:-52087419 | MS.gene84158:CDS |
GATGTCTCTGTATCTTTGAC+TGG | 0.523700 | 2.3:-52088879 | MS.gene84158:intron |
TATTAAGCATCAAATCCAAA+TGG | 0.524059 | 2.3:+52086449 | None:intergenic |
CCAAAGGACTCATTATCTCT+GGG | 0.525728 | 2.3:+52084545 | None:intergenic |
GTGATATTGTTGGCATCACA+GGG | 0.528568 | 2.3:-52088008 | MS.gene84158:CDS |
GGGTGGTTTATGATGAATGT+AGG | 0.530400 | 2.3:+52084565 | None:intergenic |
TCAAAACGTTCAGTCAGGCC+TGG | 0.531441 | 2.3:+52084502 | None:intergenic |
TCATTATGATGAGTTACAAA+TGG | 0.532542 | 2.3:+52086210 | None:intergenic |
TCTTATAGGAAACTAGATAC+CGG | 0.534162 | 2.3:-52086477 | MS.gene84158:intron |
GGGAGCGGTGACCGGAGGAT+CGG | 0.535162 | 2.3:+52090114 | None:intergenic |
TTGCCACCAACTGCTGGTTG+GGG | 0.535671 | 2.3:-52084117 | MS.gene84158:CDS |
TTTGATTTCGTACTTCAAGC+AGG | 0.536453 | 2.3:+52085588 | None:intergenic |
AATATGAAGGTTTAAGTGAC+GGG | 0.538203 | 2.3:-52088914 | MS.gene84158:CDS |
GTTGGGGTTTGGGTATTGAT+CGG | 0.540838 | 2.3:-52084101 | MS.gene84158:CDS |
GTTTGCCACCAACTGCTGGT+TGG | 0.542444 | 2.3:-52084119 | MS.gene84158:CDS |
TTTGCTTATGGTTTCGCCCG+CGG | 0.542525 | 2.3:+52090090 | None:intergenic |
GCGGTGACCGGAGGATCGGA+AGG | 0.543144 | 2.3:+52090118 | None:intergenic |
TGACGACGAAGCAATGGCCT+TGG | 0.543500 | 2.3:-52084172 | MS.gene84158:CDS |
TTGCAACTGAAAAGGAAGAA+GGG | 0.547876 | 2.3:-52088995 | MS.gene84158:CDS |
CACCACGCTTCACATTAGAA+TGG | 0.550558 | 2.3:+52088028 | None:intergenic |
TTAATTGCCCAGGCAAAAGC+AGG | 0.551126 | 2.3:-52087535 | MS.gene84158:intron |
CATCTTGAGGTTTCATGGCA+GGG | 0.551240 | 2.3:+52083940 | None:intergenic |
TTCGAGAAATATTCAGGACT+AGG | 0.551672 | 2.3:-52086420 | MS.gene84158:CDS |
GATCTGTGCCACTTTGCCAA+AGG | 0.552477 | 2.3:+52084529 | None:intergenic |
ATTGTCTGCATATGATGCCT+AGG | 0.553922 | 2.3:-52087466 | MS.gene84158:CDS |
TACTATTAGACAATATATCA+AGG | 0.555912 | 2.3:-52088937 | MS.gene84158:CDS |
CAATATATCAAGGAATATGA+AGG | 0.556142 | 2.3:-52088927 | MS.gene84158:CDS |
GTGAAGCGTGGTGATATTGT+TGG | 0.556325 | 2.3:-52088018 | MS.gene84158:CDS |
AATCAGACTTAAATGAGGCT+GGG | 0.556471 | 2.3:-52088062 | MS.gene84158:CDS |
TATGGTGTATGAACTTACAA+AGG | 0.559124 | 2.3:-52085869 | MS.gene84158:CDS |
AAACCCCAACCAGCAGTTGG+TGG | 0.560727 | 2.3:+52084114 | None:intergenic |
TTGCTGGTGGAGCTGCTGCT+CGG | 0.561208 | 2.3:-52086233 | MS.gene84158:CDS |
TGCCCAGGCAAAAGCAGGAA+GGG | 0.562692 | 2.3:-52087530 | MS.gene84158:intron |
AAAATCAAGTATCATGCAGA+TGG | 0.563651 | 2.3:-52085838 | MS.gene84158:CDS |
GAGTAAAGTCGATTTCAATA+GGG | 0.569876 | 2.3:+52085803 | None:intergenic |
TGTGCAAAATGTTTCGTCCA+AGG | 0.570692 | 2.3:+52084155 | None:intergenic |
AATTGGGACACGACATCTTG+AGG | 0.573397 | 2.3:+52083927 | None:intergenic |
ATCTTTGCCGTTGTACCACA+GGG | 0.576007 | 2.3:+52084342 | None:intergenic |
ATCAGGTGACGACGAAGCAA+TGG | 0.576297 | 2.3:-52084178 | MS.gene84158:CDS |
ATGGTGTATGAACTTACAAA+GGG | 0.577118 | 2.3:-52085868 | MS.gene84158:CDS |
GATTGAAGGACTAGAGGAGA+TGG | 0.578488 | 2.3:-52085671 | MS.gene84158:CDS |
TAATGAGTCCTTTGGCAAAG+TGG | 0.580424 | 2.3:-52084537 | MS.gene84158:CDS |
AACGCGCAGTTGTTTCAGGA+GGG | 0.584330 | 2.3:+52085560 | None:intergenic |
GCCCAGGCAAAAGCAGGAAG+GGG | 0.585020 | 2.3:-52087529 | MS.gene84158:intron |
CCCAGGCAAAAGCAGGAAGG+GGG | 0.588849 | 2.3:-52087528 | MS.gene84158:intron |
GGATTTGATGCTTAATACAG+AGG | 0.589305 | 2.3:-52086443 | MS.gene84158:CDS |
CCCAAACCCCAACCAGCAGT+TGG | 0.589937 | 2.3:+52084111 | None:intergenic |
GCTTATGGTTTCGCCCGCGG+CGG | 0.594753 | 2.3:+52090093 | None:intergenic |
GAATATGAAGGTTTAAGTGA+CGG | 0.594956 | 2.3:-52088915 | MS.gene84158:CDS |
CATGGGTACCAGGAAAGACC+AGG | 0.595012 | 2.3:-52087409 | MS.gene84158:CDS |
ATGCACACAACACACCTGAA+TGG | 0.598541 | 2.3:+52085778 | None:intergenic |
ATTGTTTATCAACAAACATG+AGG | 0.601110 | 2.3:-52084479 | MS.gene84158:intron |
TTGCCCAGGCAAAAGCAGGA+AGG | 0.601542 | 2.3:-52087531 | MS.gene84158:intron |
CAACAATGGGTACCTCGCAT+CGG | 0.602104 | 2.3:+52088676 | None:intergenic |
CACACAACACACCTGAATGG+TGG | 0.605501 | 2.3:+52085781 | None:intergenic |
GCGGCGGGAGCGGTGACCGG+AGG | 0.606172 | 2.3:+52090109 | None:intergenic |
CCTTGAAACCATCATCATGA+AGG | 0.608043 | 2.3:+52088711 | None:intergenic |
AAGATTTGCTGATCAACTCA+AGG | 0.608986 | 2.3:-52084324 | MS.gene84158:intron |
AAACGCGCAGTTGTTTCAGG+AGG | 0.609118 | 2.3:+52085559 | None:intergenic |
TGAATGACCCTGTGGTACAA+CGG | 0.609536 | 2.3:-52084349 | MS.gene84158:CDS |
AAAGACGAGCTTTGCACCAG+AGG | 0.612017 | 2.3:+52088739 | None:intergenic |
GTAAGCCATGTAGAACTCAC+AGG | 0.615426 | 2.3:+52086044 | None:intergenic |
TGACATGATTGAAGGACTAG+AGG | 0.616183 | 2.3:-52085677 | MS.gene84158:CDS |
GAAGGACTAGAGGAGATGGC+AGG | 0.616562 | 2.3:-52085667 | MS.gene84158:CDS |
CAGTAAATCAGACTTAAATG+AGG | 0.619051 | 2.3:-52088067 | MS.gene84158:CDS |
TTCAGGTTATGGCCGATGCG+AGG | 0.639844 | 2.3:-52088688 | MS.gene84158:intron |
TGAGGAAGATATGGATCCAA+CGG | 0.647707 | 2.3:-52089145 | MS.gene84158:intron |
ACGCGCAGTTGTTTCAGGAG+GGG | 0.649827 | 2.3:+52085561 | None:intergenic |
GTCCATTCTAATGTGAAGCG+TGG | 0.650854 | 2.3:-52088030 | MS.gene84158:CDS |
GTGACCGGAGGATCGGAAGG+AGG | 0.658624 | 2.3:+52090121 | None:intergenic |
ATAGTGGCAGAGAATTTGTG+TGG | 0.661712 | 2.3:+52088960 | None:intergenic |
ATGATGAACATGATTGCTGG+TGG | 0.667461 | 2.3:-52086246 | MS.gene84158:CDS |
AAGTGGCACAGATCAAAACC+AGG | 0.673243 | 2.3:-52084520 | MS.gene84158:CDS |
AGCATACACTCTGAAAGACC+AGG | 0.674383 | 2.3:-52087378 | MS.gene84158:intron |
TCATGCAGATGGTCTTGACA+AGG | 0.674921 | 2.3:-52085827 | MS.gene84158:CDS |
AAGGACTCATTATCTCTGGG+TGG | 0.680107 | 2.3:+52084548 | None:intergenic |
TCAAGTCTTTGGGAATACTG+AGG | 0.686954 | 2.3:+52085644 | None:intergenic |
ATAACAGAGGACATGTTGAG+CGG | 0.694394 | 2.3:-52085997 | MS.gene84158:intron |
TGACTTAATGAAGATAACAG+AGG | 0.700515 | 2.3:-52086010 | MS.gene84158:CDS |
CACTGAATTGAATGACCCTG+TGG | 0.748793 | 2.3:-52084357 | MS.gene84158:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATGAAAAATTATTACAT+AGG | - | chr2.3:52087115-52087134 | MS.gene84158:intron | 10.0% |
!! | ATTTATGATTTAAAAATTAG+AGG | - | chr2.3:52089206-52089225 | MS.gene84158:intron | 10.0% |
!! | CTTAATATGTAAAAAAAAAT+TGG | + | chr2.3:52085575-52085594 | None:intergenic | 10.0% |
!! | TAATATGTAAAAAAAAATTG+GGG | + | chr2.3:52085573-52085592 | None:intergenic | 10.0% |
!! | TTATTATTTCATAGAAAATA+TGG | + | chr2.3:52089778-52089797 | None:intergenic | 10.0% |
!!! | AAAGTTTAAAACAAAAAAAA+AGG | + | chr2.3:52084026-52084045 | None:intergenic | 10.0% |
!!! | AAGTTTAAAACAAAAAAAAA+GGG | + | chr2.3:52084025-52084044 | None:intergenic | 10.0% |
!!! | CAATTTTTTTTTACATATTA+AGG | - | chr2.3:52085573-52085592 | MS.gene84158:CDS | 10.0% |
!!! | GAATTATAATATCATTTTAA+AGG | - | chr2.3:52086452-52086471 | MS.gene84158:CDS | 10.0% |
!!! | GATGAAAATATATTTTATAA+GGG | + | chr2.3:52085653-52085672 | None:intergenic | 10.0% |
!!! | TATGTAATAATTTTTCATTT+TGG | + | chr2.3:52087116-52087135 | None:intergenic | 10.0% |
!!! | TGATGAAAATATATTTTATA+AGG | + | chr2.3:52085654-52085673 | None:intergenic | 10.0% |
!!! | TTTTTTTCTTTTTTTACAAT+AGG | - | chr2.3:52084646-52084665 | MS.gene84158:intron | 10.0% |
!! | AAAAAAATCAATCATATCAA+AGG | + | chr2.3:52089127-52089146 | None:intergenic | 15.0% |
!! | AAAAATTTCTATGAGAATAA+AGG | - | chr2.3:52088877-52088896 | MS.gene84158:intron | 15.0% |
!! | AAAATTTCTATGAGAATAAA+GGG | - | chr2.3:52088878-52088897 | MS.gene84158:intron | 15.0% |
!! | AACATTAAAAACTAAAGTTA+TGG | + | chr2.3:52089161-52089180 | None:intergenic | 15.0% |
!! | ACATTAAAAACTAAAGTTAT+GGG | + | chr2.3:52089160-52089179 | None:intergenic | 15.0% |
!! | TACATCAAATAGAAAAATAT+TGG | + | chr2.3:52086396-52086415 | None:intergenic | 15.0% |
!! | TTATTTAAATCCTACTAATT+GGG | - | chr2.3:52086370-52086389 | MS.gene84158:CDS | 15.0% |
!! | TTTATTTAAATCCTACTAAT+TGG | - | chr2.3:52086369-52086388 | MS.gene84158:CDS | 15.0% |
!!! | AAAAATGTACATTTCATTTT+AGG | - | chr2.3:52087453-52087472 | MS.gene84158:CDS | 15.0% |
!!! | ATAATCAAGTTTTACATAAA+AGG | + | chr2.3:52088559-52088578 | None:intergenic | 15.0% |
!!! | ATCATTTTGAAATATTGATT+TGG | - | chr2.3:52088297-52088316 | MS.gene84158:intron | 15.0% |
!!! | TAAAATTTTAAGAGTAGATT+TGG | - | chr2.3:52089238-52089257 | MS.gene84158:intron | 15.0% |
!!! | TAATCAAGTTTTACATAAAA+GGG | + | chr2.3:52088558-52088577 | None:intergenic | 15.0% |
!!! | TCTACTCTTAAAATTTTATT+TGG | + | chr2.3:52089236-52089255 | None:intergenic | 15.0% |
!!! | TGTATAAAACATAAATTTTC+AGG | + | chr2.3:52084788-52084807 | None:intergenic | 15.0% |
!!! | TTCTTTTTCAAATTTATAGT+TGG | - | chr2.3:52086878-52086897 | MS.gene84158:intron | 15.0% |
!! | AAACCTGTAAATGATTTAAT+TGG | + | chr2.3:52090113-52090132 | None:intergenic | 20.0% |
!! | AAAGATTTGTAAATCTAGTA+AGG | - | chr2.3:52084466-52084485 | MS.gene84158:intron | 20.0% |
!! | AACCTGTAAATGATTTAATT+GGG | + | chr2.3:52090112-52090131 | None:intergenic | 20.0% |
!! | AACTAATATATTTAAACTCG+AGG | - | chr2.3:52087188-52087207 | MS.gene84158:intron | 20.0% |
!! | ATATAGAAGAAATAACATGT+TGG | + | chr2.3:52084931-52084950 | None:intergenic | 20.0% |
!! | ATATTGTCTAATAGTAATAG+TGG | + | chr2.3:52085079-52085098 | None:intergenic | 20.0% |
!! | ATGAAATTGGAAAACAATTT+AGG | - | chr2.3:52087913-52087932 | MS.gene84158:intron | 20.0% |
!! | ATGTAATGTAAACAATTGTT+AGG | - | chr2.3:52084431-52084450 | MS.gene84158:intron | 20.0% |
!! | CATTCAAGAAAAAACTAAAA+TGG | + | chr2.3:52085835-52085854 | None:intergenic | 20.0% |
!! | CTAAAATCATTTCTTATGTT+AGG | - | chr2.3:52087624-52087643 | MS.gene84158:intron | 20.0% |
!! | CTTTGACATAACAATAAATA+AGG | - | chr2.3:52086119-52086138 | MS.gene84158:CDS | 20.0% |
!! | GATACTATCTTATTAAATGT+TGG | - | chr2.3:52086749-52086768 | MS.gene84158:intron | 20.0% |
!! | TACACATAAAATTCATTAAC+AGG | + | chr2.3:52088961-52088980 | None:intergenic | 20.0% |
!! | TACTATTAGACAATATATCA+AGG | - | chr2.3:52085083-52085102 | MS.gene84158:intron | 20.0% |
!! | TGATGTAAACAATTGATTAA+TGG | - | chr2.3:52084687-52084706 | MS.gene84158:intron | 20.0% |
!! | TTAAATATATAACAAAAGCC+AGG | + | chr2.3:52086961-52086980 | None:intergenic | 20.0% |
!! | TTAGAAATGTATTAACTCTT+TGG | - | chr2.3:52086161-52086180 | MS.gene84158:CDS | 20.0% |
!! | TTTACAAAGACAAATGTTTA+CGG | + | chr2.3:52088777-52088796 | None:intergenic | 20.0% |
!!! | AACAAGTTCTTATTTTAAGA+TGG | - | chr2.3:52085690-52085709 | MS.gene84158:intron | 20.0% |
!!! | ACAAGTTCTTATTTTAAGAT+GGG | - | chr2.3:52085691-52085710 | MS.gene84158:intron | 20.0% |
!!! | ACCTTTTTAAGCTTAAATTT+TGG | + | chr2.3:52085472-52085491 | None:intergenic | 20.0% |
!!! | ACTCAATTATCTTTTCTTAT+AGG | - | chr2.3:52087529-52087548 | MS.gene84158:intron | 20.0% |
!!! | CATGAATGATATCTTTTTTT+CGG | + | chr2.3:52089305-52089324 | None:intergenic | 20.0% |
!!! | CCTTTTTAAGCTTAAATTTT+GGG | + | chr2.3:52085471-52085490 | None:intergenic | 20.0% |
!!! | GTTTTTGTTTTTGAATTTAG+TGG | - | chr2.3:52085187-52085206 | MS.gene84158:intron | 20.0% |
!!! | TAATATGTTTTCTGTATTTC+AGG | - | chr2.3:52085238-52085257 | MS.gene84158:intron | 20.0% |
!!! | TACAATAGCACAATTTTTTT+GGG | - | chr2.3:52088595-52088614 | MS.gene84158:intron | 20.0% |
!!! | TAGATTTACAAATCTTTTCT+AGG | + | chr2.3:52084463-52084482 | None:intergenic | 20.0% |
!!! | TATTCATATTCTAGAGTTTT+AGG | - | chr2.3:52088644-52088663 | MS.gene84158:intron | 20.0% |
!!! | TGATTTTATTCTTTGCATTT+TGG | - | chr2.3:52084221-52084240 | MS.gene84158:intron | 20.0% |
!!! | TGTTACTTAGTTTCAAAATT+TGG | - | chr2.3:52086323-52086342 | MS.gene84158:intron | 20.0% |
!!! | TTACAATAGCACAATTTTTT+TGG | - | chr2.3:52088594-52088613 | MS.gene84158:intron | 20.0% |
!!! | TTTTCTATTTGATGTATACT+TGG | - | chr2.3:52086400-52086419 | MS.gene84158:CDS | 20.0% |
!!! | TTTTCTCTTATAGTTTTTCT+AGG | + | chr2.3:52084537-52084556 | None:intergenic | 20.0% |
!!! | TTTTTGTGTATTGAAAGATA+AGG | - | chr2.3:52087315-52087334 | MS.gene84158:intron | 20.0% |
! | AAAATTGAAGGAAACAACAA+TGG | + | chr2.3:52085361-52085380 | None:intergenic | 25.0% |
! | AAACAAAATAATAAGAGTCC+TGG | + | chr2.3:52086065-52086084 | None:intergenic | 25.0% |
! | AAAGAATTACAGACTTCATA+TGG | + | chr2.3:52086103-52086122 | None:intergenic | 25.0% |
! | AAATAACAAAAACAGTGATC+AGG | + | chr2.3:52089624-52089643 | None:intergenic | 25.0% |
! | AAATTGAAGGAAACAACAAT+GGG | + | chr2.3:52085360-52085379 | None:intergenic | 25.0% |
! | AAGGTAAATAAATGCACATA+AGG | + | chr2.3:52086914-52086933 | None:intergenic | 25.0% |
! | ACTTAGTTTCAAAATTTGGA+GGG | - | chr2.3:52086327-52086346 | MS.gene84158:intron | 25.0% |
! | ATATCAAATGACTTTAGCAT+GGG | - | chr2.3:52087247-52087266 | MS.gene84158:intron | 25.0% |
! | ATATGATATCTGAATCTGAT+TGG | - | chr2.3:52084583-52084602 | MS.gene84158:CDS | 25.0% |
! | ATTGTTTATCAACAAACATG+AGG | - | chr2.3:52089541-52089560 | MS.gene84158:intron | 25.0% |
! | CAATATATCAAGGAATATGA+AGG | - | chr2.3:52085093-52085112 | MS.gene84158:intron | 25.0% |
! | CCCAAAATTTAAGCTTAAAA+AGG | - | chr2.3:52085468-52085487 | MS.gene84158:intron | 25.0% |
! | CGAAAAAAAGATATCATTCA+TGG | - | chr2.3:52089303-52089322 | MS.gene84158:intron | 25.0% |
! | CTCTACATATGTAAAATTGA+AGG | + | chr2.3:52085373-52085392 | None:intergenic | 25.0% |
! | GAATTACCACTTATATTTAG+TGG | + | chr2.3:52088999-52089018 | None:intergenic | 25.0% |
! | GATAATTAACATATTAGACC+AGG | - | chr2.3:52088678-52088697 | MS.gene84158:intron | 25.0% |
! | GGATTGTTTATTATTACAGA+AGG | - | chr2.3:52088318-52088337 | MS.gene84158:intron | 25.0% |
! | TACTTAGTTTCAAAATTTGG+AGG | - | chr2.3:52086326-52086345 | MS.gene84158:intron | 25.0% |
! | TATTAAGCATCAAATCCAAA+TGG | + | chr2.3:52087574-52087593 | None:intergenic | 25.0% |
! | TCATTATGATGAGTTACAAA+TGG | + | chr2.3:52087813-52087832 | None:intergenic | 25.0% |
! | TCTTTCATGTATAATTTAGC+AGG | - | chr2.3:52085903-52085922 | MS.gene84158:intron | 25.0% |
! | TGAAGCTAATCAATATCTAA+AGG | - | chr2.3:52088406-52088425 | MS.gene84158:intron | 25.0% |
! | TTATGTGCATTTATTTACCT+TGG | - | chr2.3:52086913-52086932 | MS.gene84158:intron | 25.0% |
! | TTCAGGAATTGAAATCAATA+CGG | + | chr2.3:52084771-52084790 | None:intergenic | 25.0% |
!! | AAAAAGGTGATTTTATGATG+TGG | - | chr2.3:52085484-52085503 | MS.gene84158:intron | 25.0% |
!! | AAAATTGTGCTATTGTAACA+AGG | + | chr2.3:52088592-52088611 | None:intergenic | 25.0% |
!! | CTTATAATTTTCTGTCCTTT+TGG | - | chr2.3:52090037-52090056 | MS.gene84158:intron | 25.0% |
!! | GTTTTCCAATTTCATAAACA+CGG | + | chr2.3:52087908-52087927 | None:intergenic | 25.0% |
!! | TGTATTAACTCTTTGGAAAT+AGG | - | chr2.3:52086168-52086187 | MS.gene84158:CDS | 25.0% |
!!! | ATAATGTAACCTTTGATTTG+CGG | - | chr2.3:52084292-52084311 | MS.gene84158:intron | 25.0% |
!!! | ATCTGCATGTTCATTTTTTT+TGG | - | chr2.3:52090008-52090027 | MS.gene84158:intron | 25.0% |
!!! | ATGAACTGTTTTTTGTTACT+TGG | - | chr2.3:52084959-52084978 | MS.gene84158:intron | 25.0% |
!!! | ATTCTAGAGTTTTAGGTATA+TGG | - | chr2.3:52088651-52088670 | MS.gene84158:intron | 25.0% |
!!! | CATAACGTCAATACTTTTTT+AGG | - | chr2.3:52084806-52084825 | MS.gene84158:intron | 25.0% |
!!! | TGAACTGTTTTTTGTTACTT+GGG | - | chr2.3:52084960-52084979 | MS.gene84158:intron | 25.0% |
!!! | TGCTATAGTTTTGTGAATTT+AGG | - | chr2.3:52087001-52087020 | MS.gene84158:intron | 25.0% |
!!! | TTACAAATCTTTTCTAGGAT+AGG | + | chr2.3:52084458-52084477 | None:intergenic | 25.0% |
!!! | TTAGTTTTCTGTGTTATGTT+TGG | - | chr2.3:52088715-52088734 | MS.gene84158:CDS | 25.0% |
!!! | TTCTTTTTTTACAATAGGCT+TGG | - | chr2.3:52084651-52084670 | MS.gene84158:intron | 25.0% |
AAAAAACTTATCCAGCTAAG+TGG | + | chr2.3:52084630-52084649 | None:intergenic | 30.0% | |
AAAAACTTATCCAGCTAAGT+GGG | + | chr2.3:52084629-52084648 | None:intergenic | 30.0% | |
AAAATATTGGCCCAATTAGT+AGG | + | chr2.3:52086383-52086402 | None:intergenic | 30.0% | |
AAACTATTCTATCTTCAGAC+TGG | - | chr2.3:52086234-52086253 | MS.gene84158:CDS | 30.0% | |
AAAGCCAAACAAATACTTCT+AGG | + | chr2.3:52085789-52085808 | None:intergenic | 30.0% | |
AAATGTAGAGATTAACGAGT+TGG | - | chr2.3:52084554-52084573 | MS.gene84158:CDS | 30.0% | |
AAATTAAGTGAAGTCCTATC+AGG | - | chr2.3:52086194-52086213 | MS.gene84158:CDS | 30.0% | |
AACTATTCTATCTTCAGACT+GGG | - | chr2.3:52086235-52086254 | MS.gene84158:CDS | 30.0% | |
AATATGAAGGTTTAAGTGAC+GGG | - | chr2.3:52085106-52085125 | MS.gene84158:intron | 30.0% | |
AATGTAGAGATTAACGAGTT+GGG | - | chr2.3:52084555-52084574 | MS.gene84158:CDS | 30.0% | |
ACAAACATGAGGTAATATCA+TGG | - | chr2.3:52089552-52089571 | MS.gene84158:intron | 30.0% | |
ATAACATGTTGGAAACATTG+CGG | + | chr2.3:52084920-52084939 | None:intergenic | 30.0% | |
ATGAAATAGTTATCGATGAG+AGG | - | chr2.3:52088742-52088761 | MS.gene84158:CDS | 30.0% | |
ATGGTGTATGAACTTACAAA+GGG | - | chr2.3:52088152-52088171 | MS.gene84158:intron | 30.0% | |
ATTATACCCAAAAAAAAGCC+AGG | + | chr2.3:52088515-52088534 | None:intergenic | 30.0% | |
CAGTAAATCAGACTTAAATG+AGG | - | chr2.3:52085953-52085972 | MS.gene84158:intron | 30.0% | |
CCATCTTTAGATATCATTCA+TGG | - | chr2.3:52089272-52089291 | MS.gene84158:intron | 30.0% | |
CCATGAATGATATCTAAAGA+TGG | + | chr2.3:52089275-52089294 | None:intergenic | 30.0% | |
GAATATGAAGGTTTAAGTGA+CGG | - | chr2.3:52085105-52085124 | MS.gene84158:intron | 30.0% | |
GATATCAAATGACTTTAGCA+TGG | - | chr2.3:52087246-52087265 | MS.gene84158:intron | 30.0% | |
GGAAAACAATTTAGGAATGA+GGG | - | chr2.3:52087921-52087940 | MS.gene84158:intron | 30.0% | |
GGCAAAACATCTTGAAAATT+TGG | + | chr2.3:52085814-52085833 | None:intergenic | 30.0% | |
GTAATTTAACATATCGAAGC+AGG | + | chr2.3:52089737-52089756 | None:intergenic | 30.0% | |
GTCCCAATTAAATCATTTAC+AGG | - | chr2.3:52090107-52090126 | MS.gene84158:CDS | 30.0% | |
TAAATTTAAGCACGAATCGA+AGG | + | chr2.3:52084171-52084190 | None:intergenic | 30.0% | |
TAAGTATCTTGCAACTGAAA+AGG | - | chr2.3:52085017-52085036 | MS.gene84158:intron | 30.0% | |
TATACATAGCAGAATAATGC+TGG | + | chr2.3:52087352-52087371 | None:intergenic | 30.0% | |
TATCTTAGAGGGTTATAATG+AGG | - | chr2.3:52086724-52086743 | MS.gene84158:intron | 30.0% | |
TATGGTGTATGAACTTACAA+AGG | - | chr2.3:52088151-52088170 | MS.gene84158:intron | 30.0% | |
TCTTACAGATAGATACATGA+AGG | + | chr2.3:52089074-52089093 | None:intergenic | 30.0% | |
TCTTATAGGAAACTAGATAC+CGG | - | chr2.3:52087543-52087562 | MS.gene84158:intron | 30.0% | |
TGACTTAATGAAGATAACAG+AGG | - | chr2.3:52088010-52088029 | MS.gene84158:CDS | 30.0% | |
TGGAAAACAATTTAGGAATG+AGG | - | chr2.3:52087920-52087939 | MS.gene84158:intron | 30.0% | |
TTGAAACCATTGAATAGGTA+TGG | - | chr2.3:52088133-52088152 | MS.gene84158:intron | 30.0% | |
TTGTGTATTGAAAGATAAGG+TGG | - | chr2.3:52087318-52087337 | MS.gene84158:intron | 30.0% | |
! | CTTTTGCCACTAAATATAAG+TGG | - | chr2.3:52088990-52089009 | MS.gene84158:CDS | 30.0% |
! | GACTGATTCACAAAATATCA+AGG | - | chr2.3:52089956-52089975 | MS.gene84158:CDS | 30.0% |
! | GAGTAAAGTCGATTTCAATA+GGG | + | chr2.3:52088220-52088239 | None:intergenic | 30.0% |
! | GTATCATTTTCATTTTCTCC+TGG | - | chr2.3:52088494-52088513 | MS.gene84158:intron | 30.0% |
! | TATTTTCCCCAAAACTTTTG+TGG | - | chr2.3:52086522-52086541 | MS.gene84158:intron | 30.0% |
! | TTCTTATGTTAGGAGTTTTC+TGG | - | chr2.3:52087634-52087653 | MS.gene84158:intron | 30.0% |
! | TTTTATGACCTTCATGATGA+TGG | - | chr2.3:52085301-52085320 | MS.gene84158:intron | 30.0% |
! | TTTTGATAAACCTTTCTCTG+TGG | - | chr2.3:52087381-52087400 | MS.gene84158:CDS | 30.0% |
!! | ATTTTCTCCTGGCTTTTTTT+TGG | - | chr2.3:52088505-52088524 | MS.gene84158:intron | 30.0% |
!! | CTAACCTAGAAGTATTTGTT+TGG | - | chr2.3:52085782-52085801 | MS.gene84158:intron | 30.0% |
!! | TAACCCTCTAAGATAGTATA+TGG | + | chr2.3:52086719-52086738 | None:intergenic | 30.0% |
!! | TAATGTAACCTTTGATTTGC+GGG | - | chr2.3:52084293-52084312 | MS.gene84158:intron | 30.0% |
!! | TTTTCTCCTGGCTTTTTTTT+GGG | - | chr2.3:52088506-52088525 | MS.gene84158:intron | 30.0% |
!!! | TTTTGTTTGTTTTGCATCTC+AGG | - | chr2.3:52089812-52089831 | MS.gene84158:intron | 30.0% |
!!! | TTTTTTTACAATAGGCTTGG+TGG | - | chr2.3:52084654-52084673 | MS.gene84158:intron | 30.0% |
AAAAGGGAGAAATTCAACGA+TGG | + | chr2.3:52084009-52084028 | None:intergenic | 35.0% | |
AAACATTGCGGTGAAAAAAG+GGG | + | chr2.3:52084908-52084927 | None:intergenic | 35.0% | |
AAAGTAGGTGAATGAATGGA+AGG | + | chr2.3:52087730-52087749 | None:intergenic | 35.0% | |
AAATAGTTATCGATGAGAGG+AGG | - | chr2.3:52088745-52088764 | MS.gene84158:CDS | 35.0% | |
AAATCAGACTTAAATGAGGC+TGG | - | chr2.3:52085957-52085976 | MS.gene84158:intron | 35.0% | |
AACATGCAGATTGATAGAGA+CGG | + | chr2.3:52089999-52090018 | None:intergenic | 35.0% | |
AACTCACAGGTAGTAAATTC+AGG | + | chr2.3:52087966-52087985 | None:intergenic | 35.0% | |
AACTTCTTGAGAAAGAGTTC+TGG | + | chr2.3:52087867-52087886 | None:intergenic | 35.0% | |
AAGCTTCAGAATTGCAATAC+AGG | + | chr2.3:52087273-52087292 | None:intergenic | 35.0% | |
AATCAGACTTAAATGAGGCT+GGG | - | chr2.3:52085958-52085977 | MS.gene84158:intron | 35.0% | |
AATGGAAGGAAAGAAATCAC+AGG | + | chr2.3:52087716-52087735 | None:intergenic | 35.0% | |
ACAATTCAAAACGTTCAGTC+AGG | + | chr2.3:52089526-52089545 | None:intergenic | 35.0% | |
ACTATGCAAACTATCCTGAT+AGG | + | chr2.3:52086211-52086230 | None:intergenic | 35.0% | |
AGAACTCTTTCTCAAGAAGT+TGG | - | chr2.3:52087866-52087885 | MS.gene84158:intron | 35.0% | |
AGAAGAAGAAAAGAGGAGAA+AGG | - | chr2.3:52084099-52084118 | MS.gene84158:CDS | 35.0% | |
AGAAGGATTGACATGATTGA+AGG | - | chr2.3:52088335-52088354 | MS.gene84158:intron | 35.0% | |
ATCCAACATAAGGATTCTCA+AGG | + | chr2.3:52087692-52087711 | None:intergenic | 35.0% | |
ATCTAAATGCTATCCACCAT+AGG | + | chr2.3:52086793-52086812 | None:intergenic | 35.0% | |
ATGGAAGGAAAGAAATCACA+GGG | + | chr2.3:52087715-52087734 | None:intergenic | 35.0% | |
CAGAGAATTTGTGTGGATAT+GGG | + | chr2.3:52085056-52085075 | None:intergenic | 35.0% | |
CATACACCATACCTATTCAA+TGG | + | chr2.3:52088142-52088161 | None:intergenic | 35.0% | |
CTGAACCGTGTTTATGAAAT+TGG | - | chr2.3:52087900-52087919 | MS.gene84158:intron | 35.0% | |
CTGCCATATACTATCTTAGA+GGG | - | chr2.3:52086713-52086732 | MS.gene84158:intron | 35.0% | |
GAAACATTGCGGTGAAAAAA+GGG | + | chr2.3:52084909-52084928 | None:intergenic | 35.0% | |
GAAGCGTGAACAAAAGAAAA+AGG | - | chr2.3:52084072-52084091 | MS.gene84158:CDS | 35.0% | |
GAATCGAAGGTTTCGATAAA+TGG | + | chr2.3:52084158-52084177 | None:intergenic | 35.0% | |
GCAATTCATGCTATAATACC+TGG | + | chr2.3:52086663-52086682 | None:intergenic | 35.0% | |
GGATAAGAGAATTACCTTTC+TGG | + | chr2.3:52084137-52084156 | None:intergenic | 35.0% | |
GGATTTGATGCTTAATACAG+AGG | - | chr2.3:52087577-52087596 | MS.gene84158:intron | 35.0% | |
GGTGGATAGCATTTAGATTA+GGG | - | chr2.3:52086795-52086814 | MS.gene84158:intron | 35.0% | |
GTTTGCAATTGTCTCATGAA+TGG | + | chr2.3:52086275-52086294 | None:intergenic | 35.0% | |
TAAATTTCCCCGCAAATCAA+AGG | + | chr2.3:52084304-52084323 | None:intergenic | 35.0% | |
TACCTTGAGAATCCTTATGT+TGG | - | chr2.3:52087687-52087706 | MS.gene84158:intron | 35.0% | |
TCATTAAGTCATTGTAGTCC+TGG | + | chr2.3:52088001-52088020 | None:intergenic | 35.0% | |
TCGTGTTGAAACCATTGAAT+AGG | - | chr2.3:52088128-52088147 | MS.gene84158:intron | 35.0% | |
TCTAAATGCTATCCACCATA+GGG | + | chr2.3:52086792-52086811 | None:intergenic | 35.0% | |
TCTGCCATATACTATCTTAG+AGG | - | chr2.3:52086712-52086731 | MS.gene84158:intron | 35.0% | |
TCTGGAAAAGCTTGATTTCT+TGG | - | chr2.3:52087652-52087671 | MS.gene84158:intron | 35.0% | |
TGGAAAAGTAGGTGAATGAA+TGG | + | chr2.3:52087734-52087753 | None:intergenic | 35.0% | |
TGTACTTCTTTCCTGTATCT+GGG | - | chr2.3:52089046-52089065 | MS.gene84158:intron | 35.0% | |
TGTTTAACTGCAGCAATACT+TGG | - | chr2.3:52084984-52085003 | MS.gene84158:intron | 35.0% | |
TTAGCGATGAGAAAGAGATT+CGG | + | chr2.3:52083967-52083986 | None:intergenic | 35.0% | |
TTCGAGAAATATTCAGGACT+AGG | - | chr2.3:52087600-52087619 | MS.gene84158:intron | 35.0% | |
TTGCAACTGAAAAGGAAGAA+GGG | - | chr2.3:52085025-52085044 | MS.gene84158:intron | 35.0% | |
TTGCTTAAGCTTGACTAAAC+CGG | + | chr2.3:52088907-52088926 | None:intergenic | 35.0% | |
TTGTTATATTGCAGCTTGTG+GGG | - | chr2.3:52089405-52089424 | MS.gene84158:intron | 35.0% | |
! | CACTGACTATAAAGAATCCA+AGG | + | chr2.3:52086933-52086952 | None:intergenic | 35.0% |
! | CTTGTTATATTGCAGCTTGT+GGG | - | chr2.3:52089404-52089423 | MS.gene84158:intron | 35.0% |
! | GGAGTAAAGTCGATTTCAAT+AGG | + | chr2.3:52088221-52088240 | None:intergenic | 35.0% |
! | TCTTGTTATATTGCAGCTTG+TGG | - | chr2.3:52089403-52089422 | MS.gene84158:intron | 35.0% |
! | TGGTGGATAGCATTTAGATT+AGG | - | chr2.3:52086794-52086813 | MS.gene84158:intron | 35.0% |
! | TTTCTCAAGAAGTTGGTTGT+CGG | - | chr2.3:52087873-52087892 | MS.gene84158:intron | 35.0% |
! | TTTGATTTCGTACTTCAAGC+AGG | + | chr2.3:52088435-52088454 | None:intergenic | 35.0% |
!! | AAGATTTGCTGATCAACTCA+AGG | - | chr2.3:52089696-52089715 | MS.gene84158:intron | 35.0% |
!! | AATGTAACCTTTGATTTGCG+GGG | - | chr2.3:52084294-52084313 | MS.gene84158:intron | 35.0% |
!! | TTTTCCTTGTTTAATTGCCC+AGG | - | chr2.3:52086475-52086494 | MS.gene84158:intron | 35.0% |
!! | TTTTCTGTCCTTTTGGTTAC+AGG | - | chr2.3:52090044-52090063 | MS.gene84158:intron | 35.0% |
!!! | TTTGTTTTGCATCTCAGGAT+CGG | - | chr2.3:52089817-52089836 | MS.gene84158:intron | 35.0% |
AAAATATGGCCAACAGCTTG+AGG | + | chr2.3:52089764-52089783 | None:intergenic | 40.0% | |
AACTGCGCGTTTATTGGATA+AGG | - | chr2.3:52088472-52088491 | MS.gene84158:intron | 40.0% | |
AAGAACCTCCTGTAACCAAA+AGG | + | chr2.3:52090055-52090074 | None:intergenic | 40.0% | |
AAGCAAACACATAGCAACGA+AGG | + | chr2.3:52085438-52085457 | None:intergenic | 40.0% | |
AATCACAGGGATCCAACATA+AGG | + | chr2.3:52087702-52087721 | None:intergenic | 40.0% | |
ACTTGTCAGGTACTTAGTGA+AGG | - | chr2.3:52087032-52087051 | MS.gene84158:intron | 40.0% | |
AGATTTGACTCCTGTTACCT+TGG | - | chr2.3:52085752-52085771 | MS.gene84158:intron | 40.0% | |
AGGACAGAGAAGAAGAAAAG+AGG | - | chr2.3:52084092-52084111 | MS.gene84158:CDS | 40.0% | |
AGTAAGGAGAGTAGATCAGA+TGG | - | chr2.3:52084482-52084501 | MS.gene84158:CDS | 40.0% | |
AGTATATAGCACCACAAACC+TGG | + | chr2.3:52086041-52086060 | None:intergenic | 40.0% | |
ATAACAGAGGACATGTTGAG+CGG | - | chr2.3:52088023-52088042 | MS.gene84158:CDS | 40.0% | |
ATAGTGGCAGAGAATTTGTG+TGG | + | chr2.3:52085063-52085082 | None:intergenic | 40.0% | |
ATGATGAACATGATTGCTGG+TGG | - | chr2.3:52087774-52087793 | MS.gene84158:intron | 40.0% | |
ATGGGGTAGTGAATTACTAG+AGG | - | chr2.3:52084501-52084520 | MS.gene84158:CDS | 40.0% | |
ATTACCTATCCTCAAGCTGT+TGG | - | chr2.3:52089752-52089771 | MS.gene84158:intron | 40.0% | |
ATTGTCTGCATATGATGCCT+AGG | - | chr2.3:52086554-52086573 | MS.gene84158:intron | 40.0% | |
CAGAGGTTCGAGAAATATTC+AGG | - | chr2.3:52087594-52087613 | MS.gene84158:intron | 40.0% | |
CCAAAGGACTCATTATCTCT+GGG | + | chr2.3:52089478-52089497 | None:intergenic | 40.0% | |
CCAGCAATCATGTTCATCAT+AGG | + | chr2.3:52087774-52087793 | None:intergenic | 40.0% | |
CCTATGATGAACATGATTGC+TGG | - | chr2.3:52087771-52087790 | MS.gene84158:intron | 40.0% | |
CCTTGAAACCATCATCATGA+AGG | + | chr2.3:52085312-52085331 | None:intergenic | 40.0% | |
CTAAATGCTATCCACCATAG+GGG | + | chr2.3:52086791-52086810 | None:intergenic | 40.0% | |
CTGAATCTGATTGGACGTTA+TGG | - | chr2.3:52084592-52084611 | MS.gene84158:CDS | 40.0% | |
CTGTACTTCTTTCCTGTATC+TGG | - | chr2.3:52089045-52089064 | MS.gene84158:intron | 40.0% | |
CTTGCAACTGAAAAGGAAGA+AGG | - | chr2.3:52085024-52085043 | MS.gene84158:intron | 40.0% | |
GATGTCTCTGTATCTTTGAC+TGG | - | chr2.3:52085141-52085160 | MS.gene84158:intron | 40.0% | |
GCAGAGAATTTGTGTGGATA+TGG | + | chr2.3:52085057-52085076 | None:intergenic | 40.0% | |
GGAAAAGCTTGATTTCTTGG+AGG | - | chr2.3:52087655-52087674 | MS.gene84158:intron | 40.0% | |
GGAAACATTGCGGTGAAAAA+AGG | + | chr2.3:52084910-52084929 | None:intergenic | 40.0% | |
GGGTGGTTTATGATGAATGT+AGG | + | chr2.3:52089458-52089477 | None:intergenic | 40.0% | |
GTAAGGAGAGTAGATCAGAT+GGG | - | chr2.3:52084483-52084502 | MS.gene84158:CDS | 40.0% | |
GTCTTTCAGAGTGTATGCTT+CGG | + | chr2.3:52086641-52086660 | None:intergenic | 40.0% | |
GTGATATTGTTGGCATCACA+GGG | - | chr2.3:52086012-52086031 | MS.gene84158:CDS | 40.0% | |
TAAATGCTATCCACCATAGG+GGG | + | chr2.3:52086790-52086809 | None:intergenic | 40.0% | |
TAAGGAGAGTAGATCAGATG+GGG | - | chr2.3:52084484-52084503 | MS.gene84158:CDS | 40.0% | |
TAATGAGTCCTTTGGCAAAG+TGG | - | chr2.3:52089483-52089502 | MS.gene84158:intron | 40.0% | |
TACTACCTGTGAGTTCTACA+TGG | - | chr2.3:52087971-52087990 | MS.gene84158:intron | 40.0% | |
TAGCGATGAGAAAGAGATTC+GGG | + | chr2.3:52083966-52083985 | None:intergenic | 40.0% | |
TAGTCAAACACCAAGGTAAC+AGG | + | chr2.3:52085765-52085784 | None:intergenic | 40.0% | |
TAGTGAATTACTAGAGGCAG+AGG | - | chr2.3:52084507-52084526 | MS.gene84158:CDS | 40.0% | |
TCAAATCCAAATGGCGTAAC+CGG | + | chr2.3:52087565-52087584 | None:intergenic | 40.0% | |
TCTTTCAGAGTGTATGCTTC+GGG | + | chr2.3:52086640-52086659 | None:intergenic | 40.0% | |
TGAAACAACTGCGCGTTTAT+TGG | - | chr2.3:52088466-52088485 | MS.gene84158:intron | 40.0% | |
TGACATGATTGAAGGACTAG+AGG | - | chr2.3:52088343-52088362 | MS.gene84158:intron | 40.0% | |
TGAGGAAGATATGGATCCAA+CGG | - | chr2.3:52084875-52084894 | MS.gene84158:intron | 40.0% | |
TGTGCAAAATGTTTCGTCCA+AGG | + | chr2.3:52089868-52089887 | None:intergenic | 40.0% | |
TGTGCATCATTTGTCACTGA+TGG | - | chr2.3:52088258-52088277 | MS.gene84158:intron | 40.0% | |
TTTGCCTGGGCAATTAAACA+AGG | + | chr2.3:52086482-52086501 | None:intergenic | 40.0% | |
! | AAATTCAACGATGGTGGTGA+TGG | + | chr2.3:52084000-52084019 | None:intergenic | 40.0% |
! | AATAAACGCGCAGTTGTTTC+AGG | + | chr2.3:52088467-52088486 | None:intergenic | 40.0% |
! | ACAGCACCACAAAAGTTTTG+GGG | + | chr2.3:52086531-52086550 | None:intergenic | 40.0% |
! | AGACAGCACCACAAAAGTTT+TGG | + | chr2.3:52086533-52086552 | None:intergenic | 40.0% |
! | AGAGTAGATTTGGAGCTGAA+TGG | - | chr2.3:52089248-52089267 | MS.gene84158:intron | 40.0% |
! | CGAAACATTTTGCACAGCTT+TGG | - | chr2.3:52089872-52089891 | MS.gene84158:intron | 40.0% |
! | GACAGCACCACAAAAGTTTT+GGG | + | chr2.3:52086532-52086551 | None:intergenic | 40.0% |
! | TCAAGTCTTTGGGAATACTG+AGG | + | chr2.3:52088379-52088398 | None:intergenic | 40.0% |
! | TCTAGGTTAGTCAAACACCA+AGG | + | chr2.3:52085772-52085791 | None:intergenic | 40.0% |
! | TGGTTTCAAGGTTCAGGTTA+TGG | - | chr2.3:52085321-52085340 | MS.gene84158:intron | 40.0% |
! | TTGTCTCATGAATGGTAACG+AGG | + | chr2.3:52086267-52086286 | None:intergenic | 40.0% |
!! | CCTTCATGATGATGGTTTCA+AGG | - | chr2.3:52085309-52085328 | MS.gene84158:intron | 40.0% |
!! | TGATGATGGTTTCAAGGTTC+AGG | - | chr2.3:52085315-52085334 | MS.gene84158:intron | 40.0% |
!! | TTGTGGTGCTATATACTTCC+AGG | - | chr2.3:52086044-52086063 | MS.gene84158:CDS | 40.0% |
!! | TTTACAATAGGCTTGGTGGT+TGG | - | chr2.3:52084658-52084677 | MS.gene84158:intron | 40.0% |
!!! | GGGGAGTTACTTTTTGCTTA+TGG | + | chr2.3:52083945-52083964 | None:intergenic | 40.0% |
!!! | TTTTGCACAGCTTTGGAGTA+TGG | - | chr2.3:52089879-52089898 | MS.gene84158:intron | 40.0% |
AAGGACTCATTATCTCTGGG+TGG | + | chr2.3:52089475-52089494 | None:intergenic | 45.0% | |
AAGTGGCACAGATCAAAACC+AGG | - | chr2.3:52089500-52089519 | MS.gene84158:intron | 45.0% | |
AATCTTTGCCGTTGTACCAC+AGG | + | chr2.3:52089682-52089701 | None:intergenic | 45.0% | |
AATTGGGACACGACATCTTG+AGG | + | chr2.3:52090096-52090115 | None:intergenic | 45.0% | |
AATTTACCTTCCCCCTATGG+TGG | - | chr2.3:52086777-52086796 | MS.gene84158:intron | 45.0% | |
ACATCTTGAGGTTTCATGGC+AGG | + | chr2.3:52090084-52090103 | None:intergenic | 45.0% | |
ACATGAAGGAACCCAGATAC+AGG | + | chr2.3:52089060-52089079 | None:intergenic | 45.0% | |
AGAAAAGAGGAGAAAGGACG+AGG | - | chr2.3:52084105-52084124 | MS.gene84158:CDS | 45.0% | |
AGCGATGAGAAAGAGATTCG+GGG | + | chr2.3:52083965-52083984 | None:intergenic | 45.0% | |
AGCTGCTGATGAGGAAGATA+TGG | - | chr2.3:52084866-52084885 | MS.gene84158:intron | 45.0% | |
AGGGAGAAATTCAACGATGG+TGG | + | chr2.3:52084006-52084025 | None:intergenic | 45.0% | |
ATCATGCACAAACGTTCCTC+TGG | - | chr2.3:52085265-52085284 | MS.gene84158:intron | 45.0% | |
ATCTTTGCCGTTGTACCACA+GGG | + | chr2.3:52089681-52089700 | None:intergenic | 45.0% | |
ATGCACACAACACACCTGAA+TGG | + | chr2.3:52088245-52088264 | None:intergenic | 45.0% | |
CACCACGCTTCACATTAGAA+TGG | + | chr2.3:52085995-52086014 | None:intergenic | 45.0% | |
CACGACATCTTGAGGTTTCA+TGG | + | chr2.3:52090088-52090107 | None:intergenic | 45.0% | |
CACTGAATTGAATGACCCTG+TGG | - | chr2.3:52089663-52089682 | MS.gene84158:intron | 45.0% | |
CATAGGTGTTTCAACCTGAG+TGG | + | chr2.3:52087757-52087776 | None:intergenic | 45.0% | |
CATCTTGAGGTTTCATGGCA+GGG | + | chr2.3:52090083-52090102 | None:intergenic | 45.0% | |
CCCAGAGATAATGAGTCCTT+TGG | - | chr2.3:52089475-52089494 | MS.gene84158:intron | 45.0% | |
CTAACGCTGAAATCTTCTCC+TGG | + | chr2.3:52088699-52088718 | None:intergenic | 45.0% | |
CTATGAGAATAAAGGGCAGC+CGG | - | chr2.3:52088885-52088904 | MS.gene84158:CDS | 45.0% | |
GATTGAAGGACTAGAGGAGA+TGG | - | chr2.3:52088349-52088368 | MS.gene84158:intron | 45.0% | |
GCCAAAGGACTCATTATCTC+TGG | + | chr2.3:52089479-52089498 | None:intergenic | 45.0% | |
GGTGATATTGTTGGCATCAC+AGG | - | chr2.3:52086011-52086030 | MS.gene84158:CDS | 45.0% | |
GTAAGCCATGTAGAACTCAC+AGG | + | chr2.3:52087979-52087998 | None:intergenic | 45.0% | |
GTATCAGCAGAGCTCTTAAC+TGG | + | chr2.3:52088835-52088854 | None:intergenic | 45.0% | |
GTCCATTCTAATGTGAAGCG+TGG | - | chr2.3:52085990-52086009 | MS.gene84158:intron | 45.0% | |
GTGAAGCGTGGTGATATTGT+TGG | - | chr2.3:52086002-52086021 | MS.gene84158:CDS | 45.0% | |
TCGACTTTACTCCACCATTC+AGG | - | chr2.3:52088228-52088247 | MS.gene84158:intron | 45.0% | |
TGAATGACCCTGTGGTACAA+CGG | - | chr2.3:52089671-52089690 | MS.gene84158:intron | 45.0% | |
TGAGTTCTACATGGCTTACC+AGG | - | chr2.3:52087980-52087999 | MS.gene84158:intron | 45.0% | |
TGCAATTTACCTTCCCCCTA+TGG | - | chr2.3:52086774-52086793 | MS.gene84158:intron | 45.0% | |
TGCAGCAATACTTGGAGAAC+AGG | - | chr2.3:52084992-52085011 | MS.gene84158:intron | 45.0% | |
TGTTCAGCATCCACAGAGAA+AGG | + | chr2.3:52087394-52087413 | None:intergenic | 45.0% | |
TTAATTGCCCAGGCAAAAGC+AGG | - | chr2.3:52086485-52086504 | MS.gene84158:intron | 45.0% | |
TTAGGAAGCTGCAACTTGTC+AGG | - | chr2.3:52087019-52087038 | MS.gene84158:intron | 45.0% | |
TTTATAGTCAGTGCGCTACC+TGG | - | chr2.3:52086940-52086959 | MS.gene84158:intron | 45.0% | |
! | AACCTGAGTGGTGGAAAAGT+AGG | + | chr2.3:52087745-52087764 | None:intergenic | 45.0% |
! | AGCATACACTCTGAAAGACC+AGG | - | chr2.3:52086642-52086661 | MS.gene84158:intron | 45.0% |
! | AGCTGCAGGTTTGTTCTCTT+TGG | + | chr2.3:52084850-52084869 | None:intergenic | 45.0% |
! | TAGATACCGGTTACGCCATT+TGG | - | chr2.3:52087556-52087575 | MS.gene84158:intron | 45.0% |
! | TCATGCAGATGGTCTTGACA+AGG | - | chr2.3:52088193-52088212 | MS.gene84158:intron | 45.0% |
! | TGCATTTTCTCCACGCTACA+CGG | + | chr2.3:52089371-52089390 | None:intergenic | 45.0% |
! | TGCTGCTGCTGATAATGCAT+GGG | - | chr2.3:52086594-52086613 | MS.gene84158:intron | 45.0% |
! | TTGAGCGGTGAGCATTTTCT+AGG | - | chr2.3:52088038-52088057 | MS.gene84158:CDS | 45.0% |
!! | GTTGGGGTTTGGGTATTGAT+CGG | - | chr2.3:52089919-52089938 | MS.gene84158:CDS | 45.0% |
!! | TCTGTCCTTTTGGTTACAGG+AGG | - | chr2.3:52090047-52090066 | MS.gene84158:intron | 45.0% |
!! | TTGGACGTTATGGTGTCGTT+TGG | - | chr2.3:52084602-52084621 | MS.gene84158:CDS | 45.0% |
!! | TTAATATGTAAAAAAAAATT+GGG | + | chr2.3:52085574-52085593 | None:intergenic | 5.0% |
!!! | GTATTTAATTTTTTAAATTT+CGG | - | chr2.3:52084325-52084344 | MS.gene84158:CDS | 5.0% |
!!! | TAATGAAAATATATTTTATA+AGG | + | chr2.3:52085616-52085635 | None:intergenic | 5.0% |
AAAAAGGGGAGTCACACCGT+TGG | + | chr2.3:52084894-52084913 | None:intergenic | 50.0% | |
AAAGACGAGCTTTGCACCAG+AGG | + | chr2.3:52085284-52085303 | None:intergenic | 50.0% | |
AGGTGTTTCAACCTGAGTGG+TGG | + | chr2.3:52087754-52087773 | None:intergenic | 50.0% | |
AGTGTATGCTTCGGGATTCC+TGG | + | chr2.3:52086632-52086651 | None:intergenic | 50.0% | |
ATCAGGTGACGACGAAGCAA+TGG | - | chr2.3:52089842-52089861 | MS.gene84158:intron | 50.0% | |
ATGGCCAACAGCTTGAGGAT+AGG | + | chr2.3:52089759-52089778 | None:intergenic | 50.0% | |
CAACAATGGGTACCTCGCAT+CGG | + | chr2.3:52085347-52085366 | None:intergenic | 50.0% | |
CACACAACACACCTGAATGG+TGG | + | chr2.3:52088242-52088261 | None:intergenic | 50.0% | |
GCGATGAGAAAGAGATTCGG+GGG | + | chr2.3:52083964-52083983 | None:intergenic | 50.0% | |
GGACGAGGAAAAAGCCAGAA+AGG | - | chr2.3:52084120-52084139 | MS.gene84158:CDS | 50.0% | |
TCAAAACGTTCAGTCAGGCC+TGG | + | chr2.3:52089521-52089540 | None:intergenic | 50.0% | |
TCACAGGGTTTCCAGGTTTG+TGG | - | chr2.3:52086027-52086046 | MS.gene84158:CDS | 50.0% | |
TCAGCGCTCGTCAAGTCTTT+GGG | + | chr2.3:52088389-52088408 | None:intergenic | 50.0% | |
TTCAGCGCTCGTCAAGTCTT+TGG | + | chr2.3:52088390-52088409 | None:intergenic | 50.0% | |
TTTGCTTATGGTTTCGCCCG+CGG | + | chr2.3:52083933-52083952 | None:intergenic | 50.0% | |
! | AAACGCGCAGTTGTTTCAGG+AGG | + | chr2.3:52088464-52088483 | None:intergenic | 50.0% |
! | AACGCGCAGTTGTTTCAGGA+GGG | + | chr2.3:52088463-52088482 | None:intergenic | 50.0% |
! | CATTTTCTCCACGCTACACG+GGG | + | chr2.3:52089369-52089388 | None:intergenic | 50.0% |
! | CTCAAGAAGTTGGTTGTCGG+TGG | - | chr2.3:52087876-52087895 | MS.gene84158:intron | 50.0% |
! | CTGCTGCTGCTGATAATGCA+TGG | - | chr2.3:52086593-52086612 | MS.gene84158:intron | 50.0% |
! | GCAGCAGCAGATTTTTGCCT+AGG | + | chr2.3:52086574-52086593 | None:intergenic | 50.0% |
! | GCATTTTCTCCACGCTACAC+GGG | + | chr2.3:52089370-52089389 | None:intergenic | 50.0% |
! | GCTGATAATGCATGGGTACC+AGG | - | chr2.3:52086601-52086620 | MS.gene84158:intron | 50.0% |
! | TATGGTTTGCCACCAACTGC+TGG | - | chr2.3:52089897-52089916 | MS.gene84158:intron | 50.0% |
! | TTTGCCACCAACTGCTGGTT+GGG | - | chr2.3:52089902-52089921 | MS.gene84158:CDS | 50.0% |
!! | CACCTACTTTTCCACCACTC+AGG | - | chr2.3:52087740-52087759 | MS.gene84158:intron | 50.0% |
!! | GATCTGTGCCACTTTGCCAA+AGG | + | chr2.3:52089494-52089513 | None:intergenic | 50.0% |
AAACCCCAACCAGCAGTTGG+TGG | + | chr2.3:52089909-52089928 | None:intergenic | 55.0% | |
ACAACCTCCTTCCGATCCTC+CGG | - | chr2.3:52083895-52083914 | MS.gene84158:CDS | 55.0% | |
CAAACCTGCAGCTGCTGATG+AGG | - | chr2.3:52084857-52084876 | MS.gene84158:intron | 55.0% | |
CATGGGTACCAGGAAAGACC+AGG | - | chr2.3:52086611-52086630 | MS.gene84158:intron | 55.0% | |
GAAGGACTAGAGGAGATGGC+AGG | - | chr2.3:52088353-52088372 | MS.gene84158:intron | 55.0% | |
GCATCTCAGGATCGGCAATC+AGG | - | chr2.3:52089825-52089844 | MS.gene84158:intron | 55.0% | |
GTCGTTTGGTCCCACTTAGC+TGG | - | chr2.3:52084616-52084635 | MS.gene84158:intron | 55.0% | |
GTTGGCATCACAGGGTTTCC+AGG | - | chr2.3:52086020-52086039 | MS.gene84158:CDS | 55.0% | |
GTTTGCCACCAACTGCTGGT+TGG | - | chr2.3:52089901-52089920 | MS.gene84158:CDS | 55.0% | |
TCTTCCTCATCAGCAGCTGC+AGG | + | chr2.3:52084864-52084883 | None:intergenic | 55.0% | |
TGACGACGAAGCAATGGCCT+TGG | - | chr2.3:52089848-52089867 | MS.gene84158:intron | 55.0% | |
TGCCCAGGCAAAAGCAGGAA+GGG | - | chr2.3:52086490-52086509 | MS.gene84158:intron | 55.0% | |
TGCTATCCACCATAGGGGGA+AGG | + | chr2.3:52086786-52086805 | None:intergenic | 55.0% | |
TTGCCCAGGCAAAAGCAGGA+AGG | - | chr2.3:52086489-52086508 | MS.gene84158:intron | 55.0% | |
! | ACCAACTGCTGGTTGGGGTT+TGG | - | chr2.3:52089908-52089927 | MS.gene84158:CDS | 55.0% |
! | ACGCGCAGTTGTTTCAGGAG+GGG | + | chr2.3:52088462-52088481 | None:intergenic | 55.0% |
! | CCAACTGCTGGTTGGGGTTT+GGG | - | chr2.3:52089909-52089928 | MS.gene84158:CDS | 55.0% |
! | TCGGGATTCCTGGTCTTTCC+TGG | + | chr2.3:52086622-52086641 | None:intergenic | 55.0% |
! | TTCAGGTTATGGCCGATGCG+AGG | - | chr2.3:52085332-52085351 | MS.gene84158:intron | 55.0% |
! | TTGCCACCAACTGCTGGTTG+GGG | - | chr2.3:52089903-52089922 | MS.gene84158:CDS | 55.0% |
!! | GCAGCTTGTGGGGCACTTTT+TGG | - | chr2.3:52089415-52089434 | MS.gene84158:intron | 55.0% |
!! | GCTTGTGGGGCACTTTTTGG+AGG | - | chr2.3:52089418-52089437 | MS.gene84158:intron | 55.0% |
CCCAAACCCCAACCAGCAGT+TGG | + | chr2.3:52089912-52089931 | None:intergenic | 60.0% | |
CCCAGGCAAAAGCAGGAAGG+GGG | - | chr2.3:52086492-52086511 | MS.gene84158:intron | 60.0% | |
GCCCAGGCAAAAGCAGGAAG+GGG | - | chr2.3:52086491-52086510 | MS.gene84158:intron | 60.0% | |
GTAGCAAACCCCGTGTAGCG+TGG | - | chr2.3:52089358-52089377 | MS.gene84158:intron | 60.0% | |
TTGCTGGTGGAGCTGCTGCT+CGG | - | chr2.3:52087787-52087806 | MS.gene84158:intron | 60.0% | |
! | CGCGCAGTTGTTTCAGGAGG+GGG | + | chr2.3:52088461-52088480 | None:intergenic | 60.0% |
!! | CCCCCTTCCTGCTTTTGCCT+GGG | + | chr2.3:52086495-52086514 | None:intergenic | 60.0% |
!! | TCCCCCTTCCTGCTTTTGCC+TGG | + | chr2.3:52086496-52086515 | None:intergenic | 60.0% |
CTTATGGTTTCGCCCGCGGC+GGG | + | chr2.3:52083929-52083948 | None:intergenic | 65.0% | |
GCTTATGGTTTCGCCCGCGG+CGG | + | chr2.3:52083930-52083949 | None:intergenic | 65.0% | |
GTGACCGGAGGATCGGAAGG+AGG | + | chr2.3:52083902-52083921 | None:intergenic | 65.0% | |
GCGGTGACCGGAGGATCGGA+AGG | + | chr2.3:52083905-52083924 | None:intergenic | 70.0% | |
GGGAGCGGTGACCGGAGGAT+CGG | + | chr2.3:52083909-52083928 | None:intergenic | 70.0% | |
! | GGTTTCGCCCGCGGCGGGAG+CGG | + | chr2.3:52083924-52083943 | None:intergenic | 80.0% |
! | TCCGGTCACCGCTCCCGCCG+CGG | - | chr2.3:52083913-52083932 | MS.gene84158:CDS | 80.0% |
! | CCCGCGGCGGGAGCGGTGAC+CGG | + | chr2.3:52083917-52083936 | None:intergenic | 85.0% |
! | CCGGTCACCGCTCCCGCCGC+GGG | - | chr2.3:52083914-52083933 | MS.gene84158:CDS | 85.0% |
! | GCGGCGGGAGCGGTGACCGG+AGG | + | chr2.3:52083914-52083933 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 52083890 | 52090152 | 52083890 | ID=MS.gene84158 |
chr2.3 | mRNA | 52083890 | 52090152 | 52083890 | ID=MS.gene84158.t1;Parent=MS.gene84158 |
chr2.3 | exon | 52090088 | 52090152 | 52090088 | ID=MS.gene84158.t1.exon1;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52090088 | 52090152 | 52090088 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52089901 | 52089976 | 52089901 | ID=MS.gene84158.t1.exon2;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52089901 | 52089976 | 52089901 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52089146 | 52089214 | 52089146 | ID=MS.gene84158.t1.exon3;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52089146 | 52089214 | 52089146 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52088880 | 52089045 | 52088880 | ID=MS.gene84158.t1.exon4;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52088880 | 52089045 | 52088880 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52088689 | 52088782 | 52088689 | ID=MS.gene84158.t1.exon5;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52088689 | 52088782 | 52088689 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52088001 | 52088086 | 52088001 | ID=MS.gene84158.t1.exon6;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52088001 | 52088086 | 52088001 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52087379 | 52087545 | 52087379 | ID=MS.gene84158.t1.exon7;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52087379 | 52087545 | 52087379 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52086366 | 52086491 | 52086366 | ID=MS.gene84158.t1.exon8;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52086366 | 52086491 | 52086366 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52085998 | 52086280 | 52085998 | ID=MS.gene84158.t1.exon9;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52085998 | 52086280 | 52085998 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52085793 | 52085892 | 52085793 | ID=MS.gene84158.t1.exon10;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52085793 | 52085892 | 52085793 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52085549 | 52085705 | 52085549 | ID=MS.gene84158.t1.exon11;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52085549 | 52085705 | 52085549 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52084480 | 52084623 | 52084480 | ID=MS.gene84158.t1.exon12;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52084480 | 52084623 | 52084480 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52084325 | 52084393 | 52084325 | ID=MS.gene84158.t1.exon13;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52084325 | 52084393 | 52084325 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52084065 | 52084208 | 52084065 | ID=MS.gene84158.t1.exon14;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52084065 | 52084208 | 52084065 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
chr2.3 | exon | 52083890 | 52083976 | 52083890 | ID=MS.gene84158.t1.exon15;Parent=MS.gene84158.t1 |
chr2.3 | CDS | 52083890 | 52083976 | 52083890 | ID=cds.MS.gene84158.t1;Parent=MS.gene84158.t1 |
Gene Sequence |
Protein sequence |