AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050252


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050252.t1 MTR_7g105080 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene050252.t1 MTR_3g092130 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene050252.t1 MTR_1g059690 100.000 128 0 0 1 128 1 128 1.29e-92 263
MS.gene050252.t1 MTR_3g092130 98.361 122 2 0 1 122 1 122 2.83e-87 250
MS.gene050252.t1 MTR_5g092700 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene050252.t1 MTR_5g092700 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene050252.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 9.38e-50 155
MS.gene050252.t1 MTR_4g073580 62.162 74 28 0 3 76 79 152 1.84e-26 96.7
MS.gene050252.t1 MTR_8g088060 100.000 76 0 0 1 76 1 76 1.45e-49 155
MS.gene050252.t1 MTR_5g033960 100.000 76 0 0 1 76 1 76 1.55e-49 155
MS.gene050252.t1 MTR_4g073580 100.000 76 0 0 1 76 1 76 3.56e-49 155
MS.gene050252.t1 MTR_4g073580 44.231 104 28 1 3 76 79 182 6.31e-20 80.9
MS.gene050252.t1 MTR_4g088485 98.701 77 1 0 1 77 1 77 4.21e-49 156
MS.gene050252.t1 MTR_4g088485 98.701 77 1 0 1 77 138 214 5.53e-49 155
MS.gene050252.t1 MTR_4g088485 79.221 77 1 1 1 77 77 138 3.49e-34 118
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 1 77 4.74e-49 156
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 77 153 4.74e-49 156
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 153 229 6.35e-49 156
MS.gene050252.t1 MTR_1g066390 98.701 77 1 0 1 77 1 77 5.54e-49 156
MS.gene050252.t1 MTR_1g066390 98.701 77 1 0 1 77 77 153 5.54e-49 156
MS.gene050252.t1 MTR_1g066390 100.000 76 0 0 1 76 153 228 8.47e-49 156
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.27e-48 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.27e-48 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.27e-48 157
MS.gene050252.t1 MTR_4g080920 97.403 77 2 0 1 77 77 153 1.39e-48 155
MS.gene050252.t1 MTR_4g080920 97.403 77 2 0 1 77 1 77 2.56e-48 154
MS.gene050252.t1 MTR_4g080920 69.737 76 23 0 1 76 153 228 5.76e-30 107
MS.gene050252.t1 MTR_6g061930 98.701 77 1 0 1 77 1 77 2.73e-48 156
MS.gene050252.t1 MTR_6g061930 98.701 77 1 0 1 77 77 153 2.73e-48 156
MS.gene050252.t1 MTR_6g061930 98.701 77 1 0 1 77 214 290 3.61e-48 156
MS.gene050252.t1 MTR_6g061930 76.623 77 3 1 1 77 153 214 1.26e-31 113
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 49 125 3.06e-48 156
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 125 201 3.06e-48 156
MS.gene050252.t1 MTR_7g116360 98.701 77 1 0 1 77 201 277 3.97e-48 155
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 3.19e-48 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 3.19e-48 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 3.19e-48 157
MS.gene050252.t1 MTR_4g081010 100.000 76 0 0 1 76 229 304 4.81e-48 156
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 4.89e-48 155
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 4.89e-48 155
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 4.89e-48 155
MS.gene050252.t1 MTR_8g081020 98.701 77 1 0 1 77 1 77 1.76e-47 157
MS.gene050252.t1 MTR_8g081020 98.701 77 1 0 1 77 77 153 1.76e-47 157
MS.gene050252.t1 MTR_8g081020 98.701 77 1 0 1 77 153 229 1.76e-47 157
MS.gene050252.t1 MTR_8g081020 98.701 77 1 0 1 77 229 305 1.76e-47 157
MS.gene050252.t1 MTR_8g081020 100.000 76 0 0 1 76 305 380 2.65e-47 156
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 1.78e-47 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 1.78e-47 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 1.78e-47 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 1.78e-47 157
MS.gene050252.t1 MTR_4g081010 100.000 76 0 0 1 76 305 380 2.68e-47 156
MS.gene050252.t1 MTR_4g080797 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene050252.t1 MTR_4g080797 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene050252.t1 MTR_4g080797 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene050252.t1 MTR_4g080797 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene050252.t1 MTR_4g080797 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene050252.t1 MTR_4g091580 97.403 77 2 0 1 77 229 305 5.42e-47 155
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 1.82e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 1.82e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 1.82e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 1.82e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.46e-47 156
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 7.63e-47 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 1.03e-46 156
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 1 77 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 77 153 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 153 229 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 229 305 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 305 381 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 98.701 77 1 0 1 77 381 457 2.44e-46 157
MS.gene050252.t1 MTR_4g081010 100.000 76 0 0 1 76 457 532 3.63e-46 156
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 1 77 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 77 153 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 153 229 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 229 305 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 305 381 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 381 457 2.52e-46 157
MS.gene050252.t1 MTR_8g018230 98.701 77 1 0 1 77 457 533 3.37e-46 156
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 1 77 2.65e-46 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 77 153 2.65e-46 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 153 229 2.65e-46 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 229 305 2.65e-46 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 381 457 2.65e-46 157
MS.gene050252.t1 MTR_4g091580 98.701 77 1 0 1 77 457 533 3.55e-46 156
MS.gene050252.t1 MTR_4g091580 96.104 77 3 0 1 77 305 381 1.00e-44 152
MS.gene050252.t1 MTR_8g479250 96.104 77 3 0 1 77 141 217 1.09e-45 150
MS.gene050252.t1 MTR_8g479250 76.389 72 6 1 1 72 217 277 6.83e-27 101
MS.gene050252.t1 MTR_8g479250 100.000 41 0 0 1 41 1 41 1.21e-20 85.1
MS.gene050252.t1 MTR_8g479250 91.429 35 3 0 43 77 107 141 1.11e-14 68.9
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 77 153 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 153 229 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 229 305 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 305 381 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 381 457 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 457 533 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 533 609 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 609 685 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 685 761 2.16e-45 157
MS.gene050252.t1 MTR_4g088495 98.701 77 1 0 1 77 761 837 2.88e-45 156
MS.gene050252.t1 MTR_4g088495 97.403 77 2 0 1 77 1 77 4.96e-44 153
MS.gene050252.t1 MTR_1g046640 71.053 76 22 0 1 76 240 315 3.01e-28 105
MS.gene050252.t1 MTR_5g076810 68.831 77 23 1 1 76 194 270 1.09e-27 103
MS.gene050252.t1 MTR_5g076660 69.863 73 22 0 1 73 266 338 8.62e-27 102
MS.gene050252.t1 MTR_5g067400 68.421 76 24 0 1 76 241 316 1.74e-25 98.2
MS.gene050252.t1 MTR_5g061310 60.000 75 30 0 1 75 2 76 4.97e-25 90.9
MS.gene050252.t1 MTR_5g076370 64.384 73 26 0 1 73 267 339 3.83e-23 92.4
MS.gene050252.t1 MTR_2g038430 61.333 75 29 0 1 75 268 342 5.57e-23 92.0
MS.gene050252.t1 MTR_5g076505 61.333 75 29 0 1 75 240 314 8.04e-23 90.9
MS.gene050252.t1 MTR_1g046650 57.895 76 32 0 1 76 171 246 3.44e-22 88.2
MS.gene050252.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 4.89e-22 89.0
MS.gene050252.t1 MTR_5g076720 65.333 75 26 0 1 75 315 389 6.25e-22 89.4
MS.gene050252.t1 MTR_1g046650 57.895 76 32 0 1 76 240 315 6.95e-22 88.6
MS.gene050252.t1 MTR_1g046650 57.895 76 32 0 1 76 271 346 9.51e-22 88.6
MS.gene050252.t1 MTR_5g076740 59.211 76 30 1 1 75 86 161 1.13e-21 84.7
MS.gene050252.t1 MTR_2g038420 60.000 75 30 0 1 75 260 334 1.35e-21 88.2
MS.gene050252.t1 MTR_7g094390 58.667 75 31 0 1 75 402 476 8.93e-21 86.7
MS.gene050252.t1 MTR_5g076520 57.333 75 31 1 1 74 244 318 3.43e-19 81.3
MS.gene050252.t1 MTR_7g024290 60.526 76 29 1 1 75 241 316 8.99e-19 80.1
MS.gene050252.t1 MTR_4g009980 55.224 67 30 0 9 75 4 70 5.06e-18 72.8
MS.gene050252.t1 MTR_5g061290 53.333 75 35 0 1 75 252 326 6.95e-18 77.8
MS.gene050252.t1 MTR_5g079360 70.213 47 14 0 50 96 9 55 4.53e-17 70.1
MS.gene050252.t1 MTR_5g076350 48.684 76 38 1 1 75 8 83 1.16e-15 67.4
MS.gene050252.t1 MTR_5g076760 59.649 57 23 0 11 67 5 61 4.47e-15 65.9
MS.gene050252.t1 MTR_5g076780 58.333 60 25 0 15 74 4 63 5.66e-15 65.1
MS.gene050252.t1 MTR_5g076340 50.649 77 36 2 1 75 9 85 1.24e-14 64.7
MS.gene050252.t1 MTR_4g080783 76.471 34 8 0 44 77 7 40 6.78e-12 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050252.t1 AT3G52590 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene050252.t1 AT2G36170 98.438 128 2 0 1 128 1 128 4.78e-91 259
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 5.57e-50 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.32e-50 156
MS.gene050252.t1 AT2G35635 100.000 76 0 0 1 76 1 76 9.81e-50 155
MS.gene050252.t1 AT2G35635 60.526 76 30 0 3 78 79 154 2.00e-26 96.7
MS.gene050252.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene050252.t1 AT2G47110 100.000 76 0 0 1 76 1 76 1.48e-49 155
MS.gene050252.t1 AT1G31340 100.000 76 0 0 1 76 1 76 1.51e-49 155
MS.gene050252.t1 AT1G31340 62.667 75 28 0 3 77 79 153 5.16e-27 98.6
MS.gene050252.t1 AT3G62250 100.000 76 0 0 1 76 1 76 1.70e-49 155
MS.gene050252.t1 AT1G23410 100.000 76 0 0 1 76 1 76 1.71e-49 155
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene050252.t1 AT4G05050 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 1 77 4.96e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 77 153 4.96e-49 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 153 229 6.65e-49 156
MS.gene050252.t1 AT1G55060 97.403 77 2 0 1 77 77 153 1.90e-48 155
MS.gene050252.t1 AT1G55060 97.368 76 2 0 1 76 153 228 2.46e-46 149
MS.gene050252.t1 AT1G55060 85.714 77 11 0 1 77 1 77 2.30e-42 139
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 1 77 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 77 153 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 153 229 3.34e-48 157
MS.gene050252.t1 AT4G02890 98.701 77 1 0 1 77 229 305 4.47e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene050252.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene050252.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene050252.t1 AT5G03240 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene050252.t1 AT5G03240 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 1 77 3.50e-48 156
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 77 153 3.50e-48 156
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 153 229 3.50e-48 156
MS.gene050252.t1 AT5G20620 100.000 76 0 0 1 76 229 304 5.28e-48 156
MS.gene050252.t1 AT1G65350 98.701 77 1 0 1 77 1 77 6.13e-48 156
MS.gene050252.t1 AT1G65350 97.403 77 2 0 1 77 152 228 9.26e-47 153
MS.gene050252.t1 AT1G65350 97.403 77 1 1 1 77 77 152 6.86e-45 148
MS.gene050252.t1 AT1G65350 80.000 90 4 1 1 76 228 317 6.05e-39 133
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 1.91e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 305 381 2.57e-47 156
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 1 77 1.97e-47 157
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 77 153 1.97e-47 157
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 153 229 1.97e-47 157
MS.gene050252.t1 AT5G20620 98.701 77 1 0 1 77 229 305 1.97e-47 157
MS.gene050252.t1 AT5G20620 100.000 76 0 0 1 76 305 380 2.96e-47 156
MS.gene050252.t1 AT5G37640 96.104 77 3 0 1 77 79 155 4.64e-47 154
MS.gene050252.t1 AT5G37640 92.208 77 6 0 1 77 155 231 6.93e-43 143
MS.gene050252.t1 AT5G37640 92.208 77 5 1 1 76 231 307 8.36e-41 138
MS.gene050252.t1 AT5G37640 77.922 77 17 0 1 77 3 79 5.00e-34 120
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 1 77 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 77 153 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 153 229 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 229 305 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 305 381 7.99e-47 157
MS.gene050252.t1 AT4G05320 98.701 77 1 0 1 77 381 457 1.07e-46 156
MS.gene050252.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene050252.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene050252.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene050252.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene050252.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene050252.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene050252.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene050252.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene050252.t1 AT3G09790 92.208 77 6 0 1 77 79 155 3.39e-40 141
MS.gene050252.t1 AT3G09790 84.416 77 12 0 1 77 3 79 9.13e-37 132
MS.gene050252.t1 AT3G09790 79.730 74 15 0 1 74 552 625 2.20e-31 117
MS.gene050252.t1 AT3G09790 70.130 77 23 0 1 77 393 469 1.33e-28 109
MS.gene050252.t1 AT3G09790 73.684 76 18 1 1 74 319 394 3.27e-27 105
MS.gene050252.t1 AT3G09790 69.512 82 20 1 1 77 238 319 7.28e-27 104
MS.gene050252.t1 AT3G09790 67.073 82 20 2 1 75 155 236 3.63e-26 102
MS.gene050252.t1 AT3G09790 65.476 84 22 1 1 77 469 552 2.57e-25 100
MS.gene050252.t1 AT1G53930 75.342 73 18 0 1 73 86 158 6.40e-33 113
MS.gene050252.t1 AT1G53950 61.972 71 27 0 1 71 69 139 2.72e-25 93.6
MS.gene050252.t1 AT1G11980 55.263 76 34 0 1 76 1 76 2.81e-24 89.0
MS.gene050252.t1 AT1G53945 46.269 67 36 0 1 67 46 112 7.40e-13 61.2
MS.gene050252.t1 AT4G12570 38.667 75 45 1 1 74 95 169 4.20e-12 62.4
MS.gene050252.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6
MS.gene050252.t1 AT5G42220 38.889 72 44 0 1 72 24 95 6.07e-12 61.6

Find 36 sgRNAs with CRISPR-Local

Find 40 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCAAAGTTGATTCTTTC+TGG 0.101498 7.1:-52812183 None:intergenic
TCCATCTTCCAACTGCTTTC+CGG 0.264402 7.1:-52812137 None:intergenic
CTTATCCTGGTTATACTTCC+TGG 0.288777 7.1:-52812257 None:intergenic
GTCTACTTGATCTTCTTCTT+TGG 0.291217 7.1:-52812367 None:intergenic
AAGATCAACCTCTGCTGGTC+CGG 0.328982 7.1:-52812112 None:intergenic
TCTTCTTCTTTGGCCTCAAC+TGG 0.335525 7.1:-52812357 None:intergenic
CTCAAGGGTGATAGTCTTGC+CGG 0.357525 7.1:-52812026 None:intergenic
AATCATTGAGCCTTCTTTGA+TGG 0.363914 7.1:+52812228 MS.gene050252:CDS
CAACGTCAAAGCTAAGATTC+AGG 0.397707 7.1:+52812072 MS.gene050252:CDS
AGATCAACCTCTGCTGGTCC+GGG 0.424083 7.1:-52812111 None:intergenic
CTTCTTTGATGGCGTTGGCC+AGG 0.452976 7.1:+52812239 MS.gene050252:CDS
CGGCGAAGATCAACCTCTGC+TGG 0.466798 7.1:-52812117 None:intergenic
TGAGCCTTCTTTGATGGCGT+TGG 0.490761 7.1:+52812234 MS.gene050252:CDS
CTGGCCAACGCCATCAAAGA+AGG 0.492085 7.1:-52812238 None:intergenic
TGCGGCAGATAGTCTTATCC+TGG 0.502333 7.1:-52812270 None:intergenic
GCCGGAAAGCAGTTGGAAGA+TGG 0.509801 7.1:+52812136 MS.gene050252:CDS
ATCCTCGTGCTGTCAACTGC+AGG 0.522753 7.1:+52812311 MS.gene050252:CDS
GCTAAGATTCAGGATAAAGA+AGG 0.531791 7.1:+52812082 MS.gene050252:CDS
GGTGATAGTCTTGCCGGTGA+GGG 0.538859 7.1:-52812020 None:intergenic
CAGCAGAGGTTGATCTTCGC+CGG 0.541092 7.1:+52812118 MS.gene050252:CDS
GATCTTCGCCGGAAAGCAGT+TGG 0.546373 7.1:+52812129 MS.gene050252:CDS
GGGTGATAGTCTTGCCGGTG+AGG 0.566343 7.1:-52812021 None:intergenic
CTGGATGTTGTAGTCAGCAA+GGG 0.569635 7.1:-52812164 None:intergenic
TGTCGCTTGACTCCACCTCA+AGG 0.574617 7.1:-52812042 None:intergenic
ATCAACCTCTGCTGGTCCGG+GGG 0.575505 7.1:-52812109 None:intergenic
ATCTTCGTGAAAACCCTCAC+CGG 0.581247 7.1:+52812007 MS.gene050252:CDS
TTCCTGCAGTTGACAGCACG+AGG 0.583320 7.1:-52812313 None:intergenic
TCTGGATGTTGTAGTCAGCA+AGG 0.585018 7.1:-52812165 None:intergenic
GTTGGCCAGGAAGTATAACC+AGG 0.589917 7.1:+52812252 MS.gene050252:CDS
GCGGACACAGCAACCAGTTG+AGG 0.594047 7.1:+52812344 MS.gene050252:CDS
GTAAACGTGCATAGCACTTG+CGG 0.599884 7.1:-52812288 None:intergenic
GATCAACCTCTGCTGGTCCG+GGG 0.600001 7.1:-52812110 None:intergenic
CAAGACTATCACCCTTGAGG+TGG 0.603784 7.1:+52812030 MS.gene050252:CDS
GTCGCTTGACTCCACCTCAA+GGG 0.609137 7.1:-52812041 None:intergenic
GGATAAAGAAGGAATTCCCC+CGG 0.626406 7.1:+52812093 MS.gene050252:CDS
CGGCAAGACTATCACCCTTG+AGG 0.665715 7.1:+52812027 MS.gene050252:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AATCATTGAGCCTTCTTTGA+TGG + chr7.1:52812228-52812247 MS.gene050252:CDS 35.0%
GCTAAGATTCAGGATAAAGA+AGG + chr7.1:52812082-52812101 MS.gene050252:CDS 35.0%
! GATGCAAAGTTGATTCTTTC+TGG - chr7.1:52812186-52812205 None:intergenic 35.0%
!!! CAACTTTGCATCTTGTTTTG+AGG + chr7.1:52812194-52812213 MS.gene050252:CDS 35.0%
AACTGCAGGAAAAAGAAGTG+CGG + chr7.1:52812325-52812344 MS.gene050252:CDS 40.0%
CAACGTCAAAGCTAAGATTC+AGG + chr7.1:52812072-52812091 MS.gene050252:CDS 40.0%
CTTATCCTGGTTATACTTCC+TGG - chr7.1:52812260-52812279 None:intergenic 40.0%
ATCTTCGTGAAAACCCTCAC+CGG + chr7.1:52812007-52812026 MS.gene050252:CDS 45.0%
CTGGATGTTGTAGTCAGCAA+GGG - chr7.1:52812167-52812186 None:intergenic 45.0%
GGATAAAGAAGGAATTCCCC+CGG + chr7.1:52812093-52812112 MS.gene050252:CDS 45.0%
GTAAACGTGCATAGCACTTG+CGG - chr7.1:52812291-52812310 None:intergenic 45.0%
TCCATCTTCCAACTGCTTTC+CGG - chr7.1:52812140-52812159 None:intergenic 45.0%
TCTGGATGTTGTAGTCAGCA+AGG - chr7.1:52812168-52812187 None:intergenic 45.0%
TCTTCTTCTTTGGCCTCAAC+TGG - chr7.1:52812360-52812379 None:intergenic 45.0%
!!! CATCTTGTTTTGAGGCTTCG+TGG + chr7.1:52812202-52812221 MS.gene050252:CDS 45.0%
AAGATCAACCTCTGCTGGTC+CGG - chr7.1:52812115-52812134 None:intergenic 50.0%
CAAGACTATCACCCTTGAGG+TGG + chr7.1:52812030-52812049 MS.gene050252:CDS 50.0%
! CTCAAGGGTGATAGTCTTGC+CGG - chr7.1:52812029-52812048 None:intergenic 50.0%
! GTTGGCCAGGAAGTATAACC+AGG + chr7.1:52812252-52812271 MS.gene050252:CDS 50.0%
!! TGAGCCTTCTTTGATGGCGT+TGG + chr7.1:52812234-52812253 MS.gene050252:CDS 50.0%
!! TGCGGCAGATAGTCTTATCC+TGG - chr7.1:52812273-52812292 None:intergenic 50.0%
!!! CTTGTTTTGAGGCTTCGTGG+TGG + chr7.1:52812205-52812224 MS.gene050252:CDS 50.0%
AGATCAACCTCTGCTGGTCC+GGG - chr7.1:52812114-52812133 None:intergenic 55.0%
ATCCTCGTGCTGTCAACTGC+AGG + chr7.1:52812311-52812330 MS.gene050252:CDS 55.0%
CGGCAAGACTATCACCCTTG+AGG + chr7.1:52812027-52812046 MS.gene050252:CDS 55.0%
CTGGCCAACGCCATCAAAGA+AGG - chr7.1:52812241-52812260 None:intergenic 55.0%
GATCTTCGCCGGAAAGCAGT+TGG + chr7.1:52812129-52812148 MS.gene050252:CDS 55.0%
GCCGGAAAGCAGTTGGAAGA+TGG + chr7.1:52812136-52812155 MS.gene050252:CDS 55.0%
GTCGCTTGACTCCACCTCAA+GGG - chr7.1:52812044-52812063 None:intergenic 55.0%
TTCCTGCAGTTGACAGCACG+AGG - chr7.1:52812316-52812335 None:intergenic 55.0%
! CAGCAGAGGTTGATCTTCGC+CGG + chr7.1:52812118-52812137 MS.gene050252:CDS 55.0%
! GGTGATAGTCTTGCCGGTGA+GGG - chr7.1:52812023-52812042 None:intergenic 55.0%
! TGTCGCTTGACTCCACCTCA+AGG - chr7.1:52812045-52812064 None:intergenic 55.0%
!! CTTCTTTGATGGCGTTGGCC+AGG + chr7.1:52812239-52812258 MS.gene050252:CDS 55.0%
ATCAACCTCTGCTGGTCCGG+GGG - chr7.1:52812112-52812131 None:intergenic 60.0%
CGGCGAAGATCAACCTCTGC+TGG - chr7.1:52812120-52812139 None:intergenic 60.0%
GATCAACCTCTGCTGGTCCG+GGG - chr7.1:52812113-52812132 None:intergenic 60.0%
GCGGACACAGCAACCAGTTG+AGG + chr7.1:52812344-52812363 MS.gene050252:CDS 60.0%
! GGGTGATAGTCTTGCCGGTG+AGG - chr7.1:52812024-52812043 None:intergenic 60.0%
GAATTCCCCCGGACCAGCAG+AGG + chr7.1:52812104-52812123 MS.gene050252:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 52812001 52812387 52812001 ID=MS.gene050252
chr7.1 mRNA 52812001 52812387 52812001 ID=MS.gene050252.t1;Parent=MS.gene050252
chr7.1 exon 52812001 52812387 52812001 ID=MS.gene050252.t1.exon1;Parent=MS.gene050252.t1
chr7.1 CDS 52812001 52812387 52812001 ID=cds.MS.gene050252.t1;Parent=MS.gene050252.t1
Gene Sequence

>MS.gene050252

ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCAAGCGACACTATCGACAACGTCAAAGCTAAGATTCAGGATAAAGAAGGAATTCCCCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACCCTTGCTGACTACAACATCCAGAAAGAATCAACTTTGCATCTTGTTTTGAGGCTTCGTGGTGGAATCATTGAGCCTTCTTTGATGGCGTTGGCCAGGAAGTATAACCAGGATAAGACTATCTGCCGCAAGTGCTATGCACGTTTACATCCTCGTGCTGTCAACTGCAGGAAAAAGAAGTGCGGACACAGCAACCAGTTGAGGCCAAAGAAGAAGATCAAGTAG

Protein sequence

>MS.gene050252.t1

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKTICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK