AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84262

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84262.t1 MTR_8g028780 96.719 701 23 0 1 701 1 701 0.0 1382
MS.gene84262.t1 MTR_8g028780 92.486 732 24 1 1 701 1 732 0.0 1364
MS.gene84262.t1 MTR_8g028795 84.406 699 105 4 6 701 19 716 0.0 1094
MS.gene84262.t1 MTR_8g031070 79.487 702 60 8 1 701 1 619 0.0 1066
MS.gene84262.t1 MTR_1g100150 52.408 706 327 7 1 701 1 702 0.0 752
MS.gene84262.t1 MTR_1g100130 52.550 706 326 7 1 701 6 707 0.0 748
MS.gene84262.t1 MTR_1g100130 56.020 598 257 5 107 701 2 596 0.0 679
MS.gene84262.t1 MTR_2g028530 32.332 699 411 17 35 699 68 738 3.17e-112 355
MS.gene84262.t1 MTR_4g105080 33.286 700 429 15 7 686 8 689 9.60e-108 343
MS.gene84262.t1 MTR_4g105080 35.441 522 305 12 185 686 42 551 4.28e-93 300
MS.gene84262.t1 MTR_4g109530 29.412 255 130 8 227 445 428 668 3.31e-21 99.4
MS.gene84262.t1 MTR_4g109530 29.412 255 130 8 227 445 413 653 4.72e-21 99.0
MS.gene84262.t1 MTR_8g099030 31.250 208 111 6 268 446 559 763 1.28e-20 97.4
MS.gene84262.t1 MTR_8g028685 81.250 48 9 0 654 701 80 127 9.82e-19 83.2
MS.gene84262.t1 MTR_2g043900 28.708 209 116 6 268 446 548 753 1.95e-18 90.5
MS.gene84262.t1 MTR_2g043900 28.708 209 116 6 268 446 548 753 2.03e-18 90.5
MS.gene84262.t1 MTR_2g043900 28.708 209 116 6 268 446 548 753 2.49e-18 90.1
MS.gene84262.t1 MTR_8g095520 27.358 212 118 6 268 446 520 728 3.67e-18 89.7
MS.gene84262.t1 MTR_3g098380 28.169 213 115 8 268 446 541 749 5.96e-18 89.0
MS.gene84262.t1 MTR_1g083290 26.415 212 120 6 268 446 511 719 2.21e-17 87.0
MS.gene84262.t1 MTR_3g098350 27.442 215 115 6 268 446 534 743 2.85e-17 86.7
MS.gene84262.t1 MTR_7g113130 25.592 211 122 6 268 446 524 731 1.37e-16 84.7
MS.gene84262.t1 MTR_7g113130 25.592 211 122 6 268 446 524 731 1.67e-16 84.3
MS.gene84262.t1 MTR_3g098320 26.941 219 115 7 268 446 513 726 2.48e-15 80.5
MS.gene84262.t1 MTR_3g098320 26.941 219 115 7 268 446 522 735 2.54e-15 80.5
MS.gene84262.t1 MTR_8g099030 30.968 155 89 5 268 407 559 710 3.00e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84262.t1 AT1G01580 59.040 708 272 9 6 701 24 725 0.0 827
MS.gene84262.t1 AT1G01580 59.040 708 272 9 6 701 102 803 0.0 827
MS.gene84262.t1 AT1G01590 52.941 714 308 13 1 701 6 704 0.0 749
MS.gene84262.t1 AT1G23020 52.714 700 310 9 6 701 35 717 0.0 723
MS.gene84262.t1 AT1G23020 52.714 700 310 9 6 701 12 694 0.0 723
MS.gene84262.t1 AT1G23020 52.782 701 307 11 6 701 35 716 0.0 721
MS.gene84262.t1 AT1G23020 52.782 701 307 11 6 701 35 716 0.0 721
MS.gene84262.t1 AT1G23020 52.782 701 307 11 6 701 12 693 0.0 719
MS.gene84262.t1 AT1G23020 52.782 701 307 11 6 701 12 693 0.0 719
MS.gene84262.t1 AT1G23020 52.790 699 307 10 6 701 12 690 0.0 718
MS.gene84262.t1 AT5G23990 49.787 705 335 8 6 701 5 699 0.0 706
MS.gene84262.t1 AT5G23980 49.787 705 335 8 6 701 5 699 0.0 702
MS.gene84262.t1 AT5G23990 45.557 709 317 11 6 701 5 657 0.0 617
MS.gene84262.t1 AT5G23990 52.698 556 252 5 155 701 14 567 0.0 602
MS.gene84262.t1 AT5G50160 30.707 736 430 18 18 700 19 727 4.10e-109 347
MS.gene84262.t1 AT5G49730 31.924 733 435 21 8 699 27 736 1.78e-103 333
MS.gene84262.t1 AT5G49740 30.245 734 448 19 8 699 34 745 3.75e-101 327
MS.gene84262.t1 AT5G49740 30.072 695 432 17 8 670 34 706 6.42e-98 317
MS.gene84262.t1 AT5G49730 34.961 512 308 10 8 502 27 530 8.83e-97 309
MS.gene84262.t1 AT5G49740 33.721 516 311 11 8 502 34 539 2.65e-94 303
MS.gene84262.t1 AT5G50160 31.183 558 311 14 196 700 11 548 4.72e-86 281
MS.gene84262.t1 AT1G19230 30.556 252 139 6 261 481 536 782 2.20e-24 109
MS.gene84262.t1 AT1G19230 30.556 252 139 6 261 481 562 808 2.88e-24 109
MS.gene84262.t1 AT1G64060 31.731 208 110 6 268 446 565 769 9.50e-22 101
MS.gene84262.t1 AT4G25090 30.144 209 118 6 268 451 484 689 1.24e-21 100
MS.gene84262.t1 AT4G25090 30.144 209 118 6 268 451 472 677 1.37e-21 100
MS.gene84262.t1 AT5G47910 28.708 209 116 6 268 446 554 759 1.32e-19 94.4
MS.gene84262.t1 AT1G09090 30.045 223 119 8 258 446 465 684 1.34e-19 94.4
MS.gene84262.t1 AT5G07390 28.774 212 115 6 268 446 490 698 4.14e-18 89.4
MS.gene84262.t1 AT5G07390 28.774 212 115 6 268 446 522 730 4.21e-18 89.7
MS.gene84262.t1 AT5G51060 26.540 211 120 6 268 446 531 738 2.06e-17 87.4
MS.gene84262.t1 AT4G11230 29.756 205 103 6 303 489 597 778 3.57e-17 86.7
MS.gene84262.t1 AT1G09090 29.677 155 92 5 258 398 465 616 1.05e-11 68.6

Find 150 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGTGGTGCTGTTGTTTC+TGG 0.048121 8.1:-72745331 MS.gene84262:CDS
CAATATTCTCGGATCCTTTA+AGG 0.086839 8.1:-72741735 MS.gene84262:CDS
GATTTGATCCTACCAATTTC+TGG 0.166442 8.1:-72742018 MS.gene84262:CDS
CCCTAGTTTCTACCTCTTCT+TGG 0.174450 8.1:-72742838 MS.gene84262:CDS
CAAATACTTTCAACGTAAAA+TGG 0.193678 8.1:-72745278 MS.gene84262:CDS
AGTGTGGGAGTTCTTGTTTC+AGG 0.196177 8.1:-72741325 MS.gene84262:CDS
TGTTACTTCTAATAGTAAAT+TGG 0.207270 8.1:-72742463 MS.gene84262:CDS
GTTGCATCAAGTATCATATT+TGG 0.222234 8.1:-72743804 MS.gene84262:CDS
AAGGCTGATCCTACCTATTT+TGG 0.222309 8.1:-72745237 MS.gene84262:CDS
TGGGGATGAATTGGAGTATC+TGG 0.239412 8.1:+72741928 None:intergenic
TCATCTGTGCTACCAATATT+TGG 0.246300 8.1:-72743841 MS.gene84262:CDS
CTATTAGAAGTAACAGTAAA+TGG 0.254634 8.1:+72742471 None:intergenic
TGTTCTTGAATGAAGAAATT+AGG 0.262375 8.1:+72742061 None:intergenic
AATTCCATGAGTTGTGAAAA+TGG 0.267670 8.1:+72743762 None:intergenic
TCATTAAATGTGGAGGAAAT+TGG 0.269799 8.1:-72742419 MS.gene84262:CDS
CAAAGTTGGAGTATCAAATT+TGG 0.274753 8.1:-72743024 MS.gene84262:CDS
TTTCAAGTGTAGCTGTCTTA+TGG 0.275222 8.1:-72741669 MS.gene84262:CDS
TATACCTTGTGCACCAAAAT+AGG 0.277983 8.1:+72745224 None:intergenic
TTGCAACCATTCCAAGAATT+AGG 0.290013 8.1:-72742962 MS.gene84262:CDS
AATCATTGCAGATGTTGATA+TGG 0.292631 8.1:-72743049 MS.gene84262:intron
ATCATCTTCCTTATTATAAT+CGG 0.298289 8.1:-72741805 MS.gene84262:CDS
TTGGCTTAAGCCATAGAGTT+TGG 0.301650 8.1:+72741908 None:intergenic
TGTTCATTGCACTTCTTGTT+TGG 0.302432 8.1:-72744758 MS.gene84262:CDS
TGTAGAACTCAACTTCTCTA+AGG 0.307385 8.1:-72742739 MS.gene84262:CDS
ACTTCCTGCCTCATTTGTTT+AGG 0.308433 8.1:+72741301 None:intergenic
GGAGAGATATCTTTGCTTGC+TGG 0.309354 8.1:-72742999 MS.gene84262:CDS
TCAATCTATAATAAGGTTAT+TGG 0.310440 8.1:-72745349 MS.gene84262:CDS
ATGTTAAGGAATGCCCTTAA+AGG 0.312185 8.1:+72741721 None:intergenic
AACCGTCCAATGCTTGTAAA+AGG 0.316685 8.1:-72744825 MS.gene84262:CDS
ATGTAGAGACCTTAAGTAAT+TGG 0.323349 8.1:+72742308 None:intergenic
ATGTCACATGTGCCAGAAAT+TGG 0.325741 8.1:+72742006 None:intergenic
TGGCTTAAGCCATAGAGTTT+GGG 0.327218 8.1:+72741909 None:intergenic
GTTGCATCCATTTGTTCATC+TGG 0.328145 8.1:-72741280 MS.gene84262:CDS
TCCTAAGGTTCTTACAATCT+AGG 0.337184 8.1:-72742806 MS.gene84262:CDS
GTGAGGCTCAATCTATAATA+AGG 0.341776 8.1:-72745356 MS.gene84262:CDS
AGTCTTGTTAATAGCTACTT+TGG 0.343222 8.1:-72745035 MS.gene84262:CDS
CAAATTTGATACTCCAACTT+TGG 0.350831 8.1:+72743025 None:intergenic
ATATCTGTTGAAGGTCCTTA+TGG 0.351254 8.1:-72742342 MS.gene84262:CDS
AGTTGTATAGTGTGGGAATA+TGG 0.354213 8.1:-72743921 MS.gene84262:CDS
TCTCTAATGATAGAGATAAA+TGG 0.357799 8.1:+72742132 None:intergenic
CAATTCATCCCCAAACTCTA+TGG 0.364176 8.1:-72741918 MS.gene84262:CDS
ATTGGTTCATCAGATGGATT+TGG 0.365425 8.1:+72741889 None:intergenic
TAATGACTCCGATTATAATA+AGG 0.373252 8.1:+72741797 None:intergenic
ATCTAGGCGCGGCGTTCGTT+TGG 0.375381 8.1:-72742790 MS.gene84262:CDS
TTGGTGGTGCTGTTGTTTCT+GGG 0.377746 8.1:-72745330 MS.gene84262:CDS
TTGTGATGTATGCCTCAATT+TGG 0.378153 8.1:+72741968 None:intergenic
GTCTTGTTAATAGCTACTTT+GGG 0.378957 8.1:-72745034 MS.gene84262:CDS
AATATTCTCGGATCCTTTAA+GGG 0.380215 8.1:-72741734 MS.gene84262:CDS
TTTACGTTGAAAGTATTTGT+AGG 0.383540 8.1:+72745282 None:intergenic
GGAATATGGTTAGGTCTTGT+TGG 0.389598 8.1:-72743907 MS.gene84262:CDS
GAAGAAATTAGGACAATGTT+TGG 0.390489 8.1:+72742072 None:intergenic
GAAGCTACCAATGTGCATTA+TGG 0.392459 8.1:-72741517 MS.gene84262:CDS
CTGCTTCAACCAATTACTTA+AGG 0.392561 8.1:-72742317 MS.gene84262:intron
CATAGAGTTTGGGGATGAAT+TGG 0.401457 8.1:+72741919 None:intergenic
CTCAACTTCTCTAAGGGAAA+TGG 0.415714 8.1:-72742732 MS.gene84262:intron
TTTGCACAATCAGTCGTAAT+GGG 0.416566 8.1:-72744872 MS.gene84262:intron
TCTTGTTGGGAACATATGTT+TGG 0.419914 8.1:-72743893 MS.gene84262:CDS
GGACCTAACATCGCATGTAT+TGG 0.422012 8.1:+72741871 None:intergenic
GAACCAATACATGCGATGTT+AGG 0.425818 8.1:-72741874 MS.gene84262:CDS
TTTATGAACATTACACTTGT+GGG 0.427345 8.1:+72742525 None:intergenic
CCAAACAGTTGGCTTTGGCT+TGG 0.428804 8.1:-72741850 MS.gene84262:CDS
TCAGAAGTGAGGCCAAATAT+TGG 0.428860 8.1:+72743829 None:intergenic
GAATTTGTTACATCATCCAT+TGG 0.432515 8.1:-72743744 MS.gene84262:CDS
TAGGTCCAAACAGTTGGCTT+TGG 0.432863 8.1:-72741855 MS.gene84262:CDS
GCGAAGGATTTGAAAGCAAC+TGG 0.436859 8.1:+72742382 None:intergenic
GCTTCAACAAGGGACTGATA+TGG 0.438045 8.1:+72741535 None:intergenic
CTTTCAAATCCTTCGCATAT+CGG 0.439665 8.1:-72742375 MS.gene84262:CDS
TAACACAAATGCAATATTCT+CGG 0.439914 8.1:-72741746 MS.gene84262:CDS
ATCAAGTATCATATTTGGCT+TGG 0.445757 8.1:-72743799 MS.gene84262:CDS
AACTAAACCAGATGAACAAA+TGG 0.451085 8.1:+72741273 None:intergenic
TGCTTGCTGGTTTGTTCCTG+TGG 0.451945 8.1:-72742986 MS.gene84262:CDS
TAATATTCAACTCCAAATTG+AGG 0.460431 8.1:-72741980 MS.gene84262:CDS
CCAAGCCAAAGCCAACTGTT+TGG 0.461540 8.1:+72741850 None:intergenic
CACATATTACTAGCATGTTA+AGG 0.465146 8.1:+72741707 None:intergenic
AAGCATTGGACGGTTCCATA+TGG 0.468549 8.1:+72744833 None:intergenic
AAAGTAGCTATTAACAAGAC+TGG 0.468699 8.1:+72745037 None:intergenic
GAATATGGTTAGGTCTTGTT+GGG 0.469125 8.1:-72743906 MS.gene84262:CDS
GCAAGAGAAGTTGTATAGTG+TGG 0.469438 8.1:-72743929 MS.gene84262:CDS
CGCCTTGGAATATCTGTTGA+AGG 0.470730 8.1:-72742351 MS.gene84262:CDS
GGACTTCTATTTGAAATCAA+AGG 0.474812 8.1:-72741352 MS.gene84262:CDS
AGACTGGAAAAGTGTACATA+AGG 0.479175 8.1:+72745053 None:intergenic
GCATTTGTGTTATGATCGAT+AGG 0.482465 8.1:+72741757 None:intergenic
AATTTGTTACATCATCCATT+GGG 0.484395 8.1:-72743743 MS.gene84262:CDS
GACTTCTATTTGAAATCAAA+GGG 0.485832 8.1:-72741351 MS.gene84262:CDS
CTTAAGTAATTGGTTGAAGC+AGG 0.487443 8.1:+72742318 None:intergenic
GCCTAGATTGTAAGAACCTT+AGG 0.488391 8.1:+72742805 None:intergenic
TATAGTGTGGGAATATGGTT+AGG 0.492943 8.1:-72743916 MS.gene84262:CDS
TTGGTTGAAGCAGGTCCATA+AGG 0.493515 8.1:+72742327 None:intergenic
CATTGCAACTTTGATATGCT+TGG 0.494130 8.1:+72742498 None:intergenic
AGCAAAACAGATTCAACACT+TGG 0.497862 8.1:-72741626 MS.gene84262:CDS
ACCAAGAAGAGGTAGAAACT+AGG 0.499474 8.1:+72742837 None:intergenic
GCATGTATTGGTTCATCAGA+TGG 0.501968 8.1:+72741883 None:intergenic
GTTGGAGTATCAAATTTGGC+TGG 0.503021 8.1:-72743020 MS.gene84262:CDS
CCAAGAAGAGGTAGAAACTA+GGG 0.503705 8.1:+72742838 None:intergenic
CCTTCGCATATCGGTCGCCT+TGG 0.504522 8.1:-72742366 MS.gene84262:CDS
GCATTGTAAATCATTGAACT+TGG 0.506002 8.1:+72741580 None:intergenic
TCTTGGTTGATCGTTTCCTA+AGG 0.507895 8.1:-72742821 MS.gene84262:CDS
ATCTATAATAAGGTTATTGG+TGG 0.512827 8.1:-72745346 MS.gene84262:CDS
AGAAACATGGGACAACCATA+TGG 0.513216 8.1:-72744848 MS.gene84262:CDS
ATTTATGAACATTACACTTG+TGG 0.514646 8.1:+72742524 None:intergenic
ATATTTGGCCTCACTTCTGA+AGG 0.519844 8.1:-72743826 MS.gene84262:CDS
CAAGAGAAGTTGTATAGTGT+GGG 0.522227 8.1:-72743928 MS.gene84262:CDS
TTGGAATGGTTGCAATCCAC+AGG 0.526279 8.1:+72742970 None:intergenic
AGGGAGCATAGTGAAGGAAA+AGG 0.527997 8.1:+72742857 None:intergenic
CGATGTTAGGTCCAAACAGT+TGG 0.535035 8.1:-72741861 MS.gene84262:CDS
CTAAGTGTTGTCATTAAATG+TGG 0.546157 8.1:-72742429 MS.gene84262:CDS
TTTCAGGACCTAAACAAATG+AGG 0.546452 8.1:-72741309 MS.gene84262:CDS
GGCTTAAGCCATAGAGTTTG+GGG 0.548872 8.1:+72741910 None:intergenic
ATGTTGATATGGACCAAAGT+TGG 0.550286 8.1:-72743038 MS.gene84262:CDS
ACAGATGATCCACGTGTCAC+CGG 0.553412 8.1:+72743856 None:intergenic
CACATTGGTAGCTTCAACAA+GGG 0.557405 8.1:+72741525 None:intergenic
AGTCGTAATGGGAAGAAACA+TGG 0.559139 8.1:-72744861 MS.gene84262:CDS
GTAGAACTCAACTTCTCTAA+GGG 0.563199 8.1:-72742738 MS.gene84262:CDS
AATAAGGAAGATGATGAATG+AGG 0.564704 8.1:+72741813 None:intergenic
AGGACCTAAACAAATGAGGC+AGG 0.570464 8.1:-72741305 MS.gene84262:CDS
AAACAGATTCAACACTTGGA+AGG 0.578499 8.1:-72741622 MS.gene84262:CDS
CATTTGTGTTATGATCGATA+GGG 0.579836 8.1:+72741758 None:intergenic
TTGGCTTGGACACATGCTCA+TGG 0.581558 8.1:-72743785 MS.gene84262:CDS
GTGATGGTGAGTGGAGGAAG+TGG 0.581992 8.1:-72742162 MS.gene84262:CDS
CAAGCATATCAAAGTTGCAA+TGG 0.585060 8.1:-72742497 MS.gene84262:CDS
ATGCTTGTAAAAGGACCACT+TGG 0.586115 8.1:-72744816 MS.gene84262:CDS
TTTGATTAGTAGATGCCCAA+TGG 0.593677 8.1:+72743728 None:intergenic
GAAATCAAAGGGTCAAGTGT+GGG 0.598910 8.1:-72741340 MS.gene84262:CDS
GACCTTCAACAGATATTCCA+AGG 0.601000 8.1:+72742349 None:intergenic
AACAGATTCAACACTTGGAA+GGG 0.602475 8.1:-72741621 MS.gene84262:CDS
TTTACAACTTATTTGCACAT+CGG 0.603937 8.1:-72744732 MS.gene84262:CDS
TGAAATCAAAGGGTCAAGTG+TGG 0.607204 8.1:-72741341 MS.gene84262:CDS
ATTGAACTTGGTGACACTGT+TGG 0.609255 8.1:+72741592 None:intergenic
GACACACTTGTGATGGTGAG+TGG 0.610694 8.1:-72742171 MS.gene84262:CDS
CCTTGTGCACCAAAATAGGT+AGG 0.611441 8.1:+72745228 None:intergenic
AGGTAGGATCAGCCTTGCCA+CGG 0.616622 8.1:+72745244 None:intergenic
CCAAGGCGACCGATATGCGA+AGG 0.618005 8.1:+72742366 None:intergenic
AGTGTTGTCATTAAATGTGG+AGG 0.622671 8.1:-72742426 MS.gene84262:CDS
AGATGATGAAGATTACGTAG+AGG 0.625059 8.1:+72742904 None:intergenic
GTTGCCTAAAATCCGTGGCA+AGG 0.630628 8.1:-72745256 MS.gene84262:CDS
CACATGTGCCAGAAATTGGT+AGG 0.631801 8.1:+72742010 None:intergenic
GCACATTGGTAGCTTCAACA+AGG 0.633934 8.1:+72741524 None:intergenic
GGAAACGATCAACCAAGAAG+AGG 0.638587 8.1:+72742826 None:intergenic
GTCGTAATGGGAAGAAACAT+GGG 0.641838 8.1:-72744860 MS.gene84262:CDS
AAATGGTTGCCTAAAATCCG+TGG 0.642273 8.1:-72745261 MS.gene84262:CDS
ATCTACTAATCAAATGTCAG+AGG 0.642524 8.1:-72743719 MS.gene84262:intron
GAAACTAGGGAGCATAGTGA+AGG 0.643522 8.1:+72742851 None:intergenic
TCTTTGACCATAATGCACAT+TGG 0.644003 8.1:+72741510 None:intergenic
CAACAAGGGACTGATATGGA+AGG 0.647239 8.1:+72741539 None:intergenic
GTGATAGAAACAATTCCAAG+TGG 0.660807 8.1:+72744801 None:intergenic
TGATGCAACCTTCAGAAGTG+AGG 0.667104 8.1:+72743818 None:intergenic
CAGGCATGACACACTTGTGA+TGG 0.673949 8.1:-72742178 MS.gene84262:CDS
TTGAGTTCTACACCTTCACA+AGG 0.680447 8.1:+72742750 None:intergenic
AGGTTCTTACAATCTAGGCG+CGG 0.727506 8.1:-72742801 MS.gene84262:CDS
ACACTTGTGATGGTGAGTGG+AGG 0.758886 8.1:-72742168 MS.gene84262:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATACAATATTTTTAGTAAT+TGG + chr8.1:72742425-72742444 None:intergenic 10.0%
!!! TCTGTTTTTATTTTTTATTA+AGG + chr8.1:72742196-72742215 None:intergenic 10.0%
!! TCAAATAAATTAATTCGAAT+AGG + chr8.1:72743924-72743943 None:intergenic 15.0%
!!! ATATTAATTGTTCTTATTTC+AGG - chr8.1:72741512-72741531 MS.gene84262:CDS 15.0%
!! AAAAGTCAATATTCAATCTA+AGG + chr8.1:72743192-72743211 None:intergenic 20.0%
!! AAATAATCTTGTTCACAAAA+AGG - chr8.1:72742030-72742049 MS.gene84262:CDS 20.0%
!! AAGACAAAAATAACTTGAAA+AGG + chr8.1:72743493-72743512 None:intergenic 20.0%
!! AAGATTAATTATGAAGTTGA+CGG + chr8.1:72742226-72742245 None:intergenic 20.0%
!! AATATTATCAGTTTGATTCT+TGG - chr8.1:72742145-72742164 MS.gene84262:CDS 20.0%
!! ATCATCTTCCTTATTATAAT+CGG - chr8.1:72744792-72744811 MS.gene84262:CDS 20.0%
!! CAACTTCATAATTAATCTTA+TGG - chr8.1:72742227-72742246 MS.gene84262:intron 20.0%
!! CTTATATCTATACTTCAAAT+TGG + chr8.1:72744330-72744349 None:intergenic 20.0%
!! TAACTCTTAAATTAAATCAC+AGG + chr8.1:72742953-72742972 None:intergenic 20.0%
!! TCAATCTATAATAAGGTTAT+TGG - chr8.1:72741248-72741267 MS.gene84262:CDS 20.0%
!! TCTTATCATACCTATTAATT+AGG - chr8.1:72742066-72742085 MS.gene84262:CDS 20.0%
!! TGATTCAAAACCTAATTAAT+AGG + chr8.1:72742079-72742098 None:intergenic 20.0%
!! TTAATCTTAATCTTACTCTT+GGG + chr8.1:72742977-72742996 None:intergenic 20.0%
!! TTATCTTAAAGTAAACTCAT+AGG - chr8.1:72743897-72743916 MS.gene84262:CDS 20.0%
!! TTTAATCTTAATCTTACTCT+TGG + chr8.1:72742978-72742997 None:intergenic 20.0%
!! TTTCAATTCATAGAGATAAA+TGG + chr8.1:72745207-72745226 None:intergenic 20.0%
!!! AGGAAAATTTTTATGTGAAT+TGG + chr8.1:72743426-72743445 None:intergenic 20.0%
!!! GGAAAATTTTTATGTGAATT+GGG + chr8.1:72743425-72743444 None:intergenic 20.0%
!!! TGTTACTTCTAATAGTAAAT+TGG - chr8.1:72744134-72744153 MS.gene84262:intron 20.0%
! AAATAGGGATAACTAGATTA+AGG + chr8.1:72741660-72741679 None:intergenic 25.0%
! AAATTAAATCACAGGTAAGT+AGG + chr8.1:72742945-72742964 None:intergenic 25.0%
! AAGGTTAAACATCCTAATTA+CGG - chr8.1:72742302-72742321 MS.gene84262:intron 25.0%
! AATTAAATCACAGGTAAGTA+GGG + chr8.1:72742944-72742963 None:intergenic 25.0%
! AATTAGAGTATAGCACAAAT+AGG + chr8.1:72741676-72741695 None:intergenic 25.0%
! AATTCAACAAACGTTAATAG+AGG + chr8.1:72743369-72743388 None:intergenic 25.0%
! AGTTATTCATCTTAATGTCT+TGG - chr8.1:72743051-72743070 MS.gene84262:intron 25.0%
! ATCTATAATAAGGTTATTGG+TGG - chr8.1:72741251-72741270 MS.gene84262:CDS 25.0%
! ATTAGAGTATAGCACAAATA+GGG + chr8.1:72741675-72741694 None:intergenic 25.0%
! ATTTATGAACATTACACTTG+TGG + chr8.1:72744076-72744095 None:intergenic 25.0%
! CAAATACTTTCAACGTAAAA+TGG - chr8.1:72741319-72741338 MS.gene84262:CDS 25.0%
! CTATTAGAAGTAACAGTAAA+TGG + chr8.1:72744129-72744148 None:intergenic 25.0%
! GAGCTTAAAGAAATTACTTA+TGG - chr8.1:72743972-72743991 MS.gene84262:intron 25.0%
! GTTATTCATCTTAATGTCTT+GGG - chr8.1:72743052-72743071 MS.gene84262:intron 25.0%
! TAAAACAGTCTCAAAAATAG+CGG - chr8.1:72741891-72741910 MS.gene84262:CDS 25.0%
! TAAACCTTAAAAATACCATG+TGG - chr8.1:72742264-72742283 MS.gene84262:intron 25.0%
! TAACACAAATGCAATATTCT+CGG - chr8.1:72744851-72744870 MS.gene84262:CDS 25.0%
! TAATATTCAACTCCAAATTG+AGG - chr8.1:72744617-72744636 MS.gene84262:intron 25.0%
! TAATGACTCCGATTATAATA+AGG + chr8.1:72744803-72744822 None:intergenic 25.0%
! TAGGATGTTTAACCTTTAAT+AGG + chr8.1:72742298-72742317 None:intergenic 25.0%
! TCTCTAATGATAGAGATAAA+TGG + chr8.1:72744468-72744487 None:intergenic 25.0%
! TGTTCTTGAATGAAGAAATT+AGG + chr8.1:72744539-72744558 None:intergenic 25.0%
! TTTACAACTTATTTGCACAT+CGG - chr8.1:72741865-72741884 MS.gene84262:CDS 25.0%
! TTTATGAACATTACACTTGT+GGG + chr8.1:72744075-72744094 None:intergenic 25.0%
!! AAGAATTTTCTCCTAATTCT+TGG + chr8.1:72743649-72743668 None:intergenic 25.0%
!! ATAAATATTGACTGCATTTG+TGG - chr8.1:72742339-72742358 MS.gene84262:CDS 25.0%
!! CATAGCTTTTCACAATATTT+TGG + chr8.1:72742390-72742409 None:intergenic 25.0%
!! GACTTCTATTTGAAATCAAA+GGG - chr8.1:72745246-72745265 MS.gene84262:CDS 25.0%
!! TTAGTATTGTATTTAGCTCA+CGG - chr8.1:72743512-72743531 MS.gene84262:intron 25.0%
!! TTGAATCAATCAGTTTTACT+TGG - chr8.1:72745360-72745379 MS.gene84262:CDS 25.0%
!!! AATGACTTACTTTTAAGATC+AGG + chr8.1:72745113-72745132 None:intergenic 25.0%
!!! AATGTGATATGTTTTTTTGC+AGG - chr8.1:72744036-72744055 MS.gene84262:intron 25.0%
!!! AATTTGTTACATCATCCATT+GGG - chr8.1:72742854-72742873 MS.gene84262:CDS 25.0%
!!! ACATGGTATTTTTAAGGTTT+AGG + chr8.1:72742265-72742284 None:intergenic 25.0%
!!! ATGTGATATGTTTTTTTGCA+GGG - chr8.1:72744037-72744056 MS.gene84262:intron 25.0%
!!! ATTTTTAAGGTTTAGGTCTT+TGG + chr8.1:72742258-72742277 None:intergenic 25.0%
!!! TTCTGGGTTTTATTATGATT+TGG - chr8.1:72741283-72741302 MS.gene84262:CDS 25.0%
!!! TTTACGTTGAAAGTATTTGT+AGG + chr8.1:72741318-72741337 None:intergenic 25.0%
!!! TTTTTAAGGTTTAGGTCTTT+GGG + chr8.1:72742257-72742276 None:intergenic 25.0%
AAAGTAGCTATTAACAAGAC+TGG + chr8.1:72741563-72741582 None:intergenic 30.0%
AACTAAACCAGATGAACAAA+TGG + chr8.1:72745327-72745346 None:intergenic 30.0%
AATAAGGAAGATGATGAATG+AGG + chr8.1:72744787-72744806 None:intergenic 30.0%
AATATTCTCGGATCCTTTAA+GGG - chr8.1:72744863-72744882 MS.gene84262:intron 30.0%
AATCATTGCAGATGTTGATA+TGG - chr8.1:72743548-72743567 MS.gene84262:intron 30.0%
AATTCCATGAGTTGTGAAAA+TGG + chr8.1:72742838-72742857 None:intergenic 30.0%
AGTCAAAGCAAAGATCTATA+TGG + chr8.1:72743112-72743131 None:intergenic 30.0%
ATAGTTGAAGAAACAACGTA+TGG - chr8.1:72742449-72742468 MS.gene84262:CDS 30.0%
ATCAAGTATCATATTTGGCT+TGG - chr8.1:72742798-72742817 MS.gene84262:CDS 30.0%
ATCTACTAATCAAATGTCAG+AGG - chr8.1:72742878-72742897 MS.gene84262:CDS 30.0%
ATGTAGAGACCTTAAGTAAT+TGG + chr8.1:72744292-72744311 None:intergenic 30.0%
CAAATTTGATACTCCAACTT+TGG + chr8.1:72743575-72743594 None:intergenic 30.0%
CACATATTACTAGCATGTTA+AGG + chr8.1:72744893-72744912 None:intergenic 30.0%
CATTTGTGTTATGATCGATA+GGG + chr8.1:72744842-72744861 None:intergenic 30.0%
CTTATGTTTGTTCTTCTATC+AGG - chr8.1:72744400-72744419 MS.gene84262:intron 30.0%
GAAGAAATTAGGACAATGTT+TGG + chr8.1:72744528-72744547 None:intergenic 30.0%
GCATTGTAAATCATTGAACT+TGG + chr8.1:72745020-72745039 None:intergenic 30.0%
GTTGCATCAAGTATCATATT+TGG - chr8.1:72742793-72742812 MS.gene84262:CDS 30.0%
TAAACATCCTAATTACGGTT+GGG - chr8.1:72742307-72742326 MS.gene84262:intron 30.0%
TCATTAAATGTGGAGGAAAT+TGG - chr8.1:72744178-72744197 MS.gene84262:intron 30.0%
TTAAAAATACCATGTGGTTG+TGG - chr8.1:72742270-72742289 MS.gene84262:intron 30.0%
TTAAACATCCTAATTACGGT+TGG - chr8.1:72742306-72742325 MS.gene84262:intron 30.0%
! CAAAGTTGGAGTATCAAATT+TGG - chr8.1:72743573-72743592 MS.gene84262:intron 30.0%
! CTAAGTGTTGTCATTAAATG+TGG - chr8.1:72744168-72744187 MS.gene84262:intron 30.0%
! GGACTTCTATTTGAAATCAA+AGG - chr8.1:72745245-72745264 MS.gene84262:CDS 30.0%
! GTCTTGTTAATAGCTACTTT+GGG - chr8.1:72741563-72741582 MS.gene84262:CDS 30.0%
! TAGTATTGTATTTAGCTCAC+GGG - chr8.1:72743513-72743532 MS.gene84262:intron 30.0%
! TTTTATGTGAATTGGGCTTT+AGG + chr8.1:72743418-72743437 None:intergenic 30.0%
! TTTTCTCCTAATTCTTGGAA+TGG + chr8.1:72743644-72743663 None:intergenic 30.0%
!! ACAACCACATGGTATTTTTA+AGG + chr8.1:72742271-72742290 None:intergenic 30.0%
!! AGTCTTGTTAATAGCTACTT+TGG - chr8.1:72741562-72741581 MS.gene84262:CDS 30.0%
!! GAATTTGTTACATCATCCAT+TGG - chr8.1:72742853-72742872 MS.gene84262:CDS 30.0%
!!! GCTCTCATTTGATGATTTTT+TGG + chr8.1:72741609-72741628 None:intergenic 30.0%
!!! TGTGATATGTTTTTTTGCAG+GGG - chr8.1:72744038-72744057 MS.gene84262:intron 30.0%
!!! TTTGGCATTCTTGTTTTTTC+CGG - chr8.1:72742722-72742741 MS.gene84262:intron 30.0%
AAACAGATTCAACACTTGGA+AGG - chr8.1:72744975-72744994 MS.gene84262:intron 35.0%
AACAGATTCAACACTTGGAA+GGG - chr8.1:72744976-72744995 MS.gene84262:intron 35.0%
AGATGATGAAGATTACGTAG+AGG + chr8.1:72743696-72743715 None:intergenic 35.0%
AGCAAAACAGATTCAACACT+TGG - chr8.1:72744971-72744990 MS.gene84262:intron 35.0%
AGTGTTGTCATTAAATGTGG+AGG - chr8.1:72744171-72744190 MS.gene84262:intron 35.0%
AGTTGTATAGTGTGGGAATA+TGG - chr8.1:72742676-72742695 MS.gene84262:intron 35.0%
ATATCGTTGCTAAGTGTTTG+AGG + chr8.1:72741951-72741970 None:intergenic 35.0%
ATATCTGTTGAAGGTCCTTA+TGG - chr8.1:72744255-72744274 MS.gene84262:intron 35.0%
ATGAACGCAAGCATACAAAA+AGG + chr8.1:72741434-72741453 None:intergenic 35.0%
ATGTTAAGGAATGCCCTTAA+AGG + chr8.1:72744879-72744898 None:intergenic 35.0%
ATGTTGATATGGACCAAAGT+TGG - chr8.1:72743559-72743578 MS.gene84262:intron 35.0%
CAAGAGAAGTTGTATAGTGT+GGG - chr8.1:72742669-72742688 MS.gene84262:intron 35.0%
CAAGCATATCAAAGTTGCAA+TGG - chr8.1:72744100-72744119 MS.gene84262:intron 35.0%
CAATATTCTCGGATCCTTTA+AGG - chr8.1:72744862-72744881 MS.gene84262:CDS 35.0%
CATTGCAACTTTGATATGCT+TGG + chr8.1:72744102-72744121 None:intergenic 35.0%
CTGCTTCAACCAATTACTTA+AGG - chr8.1:72744280-72744299 MS.gene84262:intron 35.0%
CTTAAGTAATTGGTTGAAGC+AGG + chr8.1:72744282-72744301 None:intergenic 35.0%
CTTTCAAATCCTTCGCATAT+CGG - chr8.1:72744222-72744241 MS.gene84262:intron 35.0%
GATTTGATCCTACCAATTTC+TGG - chr8.1:72744579-72744598 MS.gene84262:intron 35.0%
GCATTTGTGTTATGATCGAT+AGG + chr8.1:72744843-72744862 None:intergenic 35.0%
GTAGAACTCAACTTCTCTAA+GGG - chr8.1:72743859-72743878 MS.gene84262:CDS 35.0%
GTGAGGCTCAATCTATAATA+AGG - chr8.1:72741241-72741260 MS.gene84262:CDS 35.0%
GTGATAGAAACAATTCCAAG+TGG + chr8.1:72741799-72741818 None:intergenic 35.0%
TATACCTTGTGCACCAAAAT+AGG + chr8.1:72741376-72741395 None:intergenic 35.0%
TATAGTGTGGGAATATGGTT+AGG - chr8.1:72742681-72742700 MS.gene84262:intron 35.0%
TATCGTTGCTAAGTGTTTGA+GGG + chr8.1:72741950-72741969 None:intergenic 35.0%
TATTAACGCTCGATGAACAA+CGG - chr8.1:72743312-72743331 MS.gene84262:intron 35.0%
TCATCTGTGCTACCAATATT+TGG - chr8.1:72742756-72742775 MS.gene84262:CDS 35.0%
TCCTAAGGTTCTTACAATCT+AGG - chr8.1:72743791-72743810 MS.gene84262:CDS 35.0%
TCTTGTTGGGAACATATGTT+TGG - chr8.1:72742704-72742723 MS.gene84262:intron 35.0%
TCTTTGACCATAATGCACAT+TGG + chr8.1:72745090-72745109 None:intergenic 35.0%
TGCTTACATATCACTCACTA+AGG + chr8.1:72743288-72743307 None:intergenic 35.0%
TGTAGAACTCAACTTCTCTA+AGG - chr8.1:72743858-72743877 MS.gene84262:CDS 35.0%
TGTGCTGTAGTGTTATATTG+TGG - chr8.1:72742628-72742647 MS.gene84262:intron 35.0%
TGTTCATTGCACTTCTTGTT+TGG - chr8.1:72741839-72741858 MS.gene84262:CDS 35.0%
TTACATATCACTCACTAAGG+AGG + chr8.1:72743285-72743304 None:intergenic 35.0%
TTGCAACCATTCCAAGAATT+AGG - chr8.1:72743635-72743654 MS.gene84262:intron 35.0%
TTGTGATGTATGCCTCAATT+TGG + chr8.1:72744632-72744651 None:intergenic 35.0%
TTTCAGGACCTAAACAAATG+AGG - chr8.1:72745288-72745307 MS.gene84262:CDS 35.0%
TTTGATTAGTAGATGCCCAA+TGG + chr8.1:72742872-72742891 None:intergenic 35.0%
TTTGCACAATCAGTCGTAAT+GGG - chr8.1:72741725-72741744 MS.gene84262:CDS 35.0%
! AGACTGGAAAAGTGTACATA+AGG + chr8.1:72741547-72741566 None:intergenic 35.0%
! ATTGGTTCATCAGATGGATT+TGG + chr8.1:72744711-72744730 None:intergenic 35.0%
! TCTGCAATGATTTAAAGCCA+TGG + chr8.1:72743540-72743559 None:intergenic 35.0%
! TTTCAAGTGTAGCTGTCTTA+TGG - chr8.1:72744928-72744947 MS.gene84262:intron 35.0%
! TTTTGCACAATCAGTCGTAA+TGG - chr8.1:72741724-72741743 MS.gene84262:CDS 35.0%
!! ATGACAACACTTAGCTTTTC+TGG + chr8.1:72744162-72744181 None:intergenic 35.0%
!! GAATATGGTTAGGTCTTGTT+GGG - chr8.1:72742691-72742710 MS.gene84262:intron 35.0%
AAATGGTTGCCTAAAATCCG+TGG - chr8.1:72741336-72741355 MS.gene84262:CDS 40.0%
AACCGTCCAATGCTTGTAAA+AGG - chr8.1:72741772-72741791 MS.gene84262:CDS 40.0%
ACCAAGAAGAGGTAGAAACT+AGG + chr8.1:72743763-72743782 None:intergenic 40.0%
ACTTCCTGCCTCATTTGTTT+AGG + chr8.1:72745299-72745318 None:intergenic 40.0%
AGAAACATGGGACAACCATA+TGG - chr8.1:72741749-72741768 MS.gene84262:CDS 40.0%
ATATTTGGCCTCACTTCTGA+AGG - chr8.1:72742771-72742790 MS.gene84262:CDS 40.0%
ATGCTTGTAAAAGGACCACT+TGG - chr8.1:72741781-72741800 MS.gene84262:CDS 40.0%
ATGTCACATGTGCCAGAAAT+TGG + chr8.1:72744594-72744613 None:intergenic 40.0%
CAATTCATCCCCAAACTCTA+TGG - chr8.1:72744679-72744698 MS.gene84262:intron 40.0%
CATAGAGTTTGGGGATGAAT+TGG + chr8.1:72744681-72744700 None:intergenic 40.0%
CCAAGAAGAGGTAGAAACTA+GGG + chr8.1:72743762-72743781 None:intergenic 40.0%
GAAATCAAAGGGTCAAGTGT+GGG - chr8.1:72745257-72745276 MS.gene84262:CDS 40.0%
GAACCAATACATGCGATGTT+AGG - chr8.1:72744723-72744742 MS.gene84262:CDS 40.0%
GAAGCTACCAATGTGCATTA+TGG - chr8.1:72745080-72745099 MS.gene84262:intron 40.0%
GACCTTCAACAGATATTCCA+AGG + chr8.1:72744251-72744270 None:intergenic 40.0%
GCAAGAGAAGTTGTATAGTG+TGG - chr8.1:72742668-72742687 MS.gene84262:intron 40.0%
GCCTAGATTGTAAGAACCTT+AGG + chr8.1:72743795-72743814 None:intergenic 40.0%
GTGGTTGTGGTACCTATTAA+AGG - chr8.1:72742283-72742302 MS.gene84262:intron 40.0%
GTTGCATCCATTTGTTCATC+TGG - chr8.1:72745317-72745336 MS.gene84262:CDS 40.0%
TAATAGGTACCACAACCACA+TGG + chr8.1:72742282-72742301 None:intergenic 40.0%
TCAAAAATAGCGGCAGAGTA+CGG - chr8.1:72741901-72741920 MS.gene84262:CDS 40.0%
TCAGAAGTGAGGCCAAATAT+TGG + chr8.1:72742771-72742790 None:intergenic 40.0%
TCTTGGTTGATCGTTTCCTA+AGG - chr8.1:72743776-72743795 MS.gene84262:CDS 40.0%
TGAAATCAAAGGGTCAAGTG+TGG - chr8.1:72745256-72745275 MS.gene84262:CDS 40.0%
TGGCTTAAGCCATAGAGTTT+GGG + chr8.1:72744691-72744710 None:intergenic 40.0%
TGTTCATCGAGCGTTAATAG+AGG + chr8.1:72743311-72743330 None:intergenic 40.0%
TTAAATGAGTCCCCCGTAAA+TGG - chr8.1:72743132-72743151 MS.gene84262:intron 40.0%
TTGAGTTCTACACCTTCACA+AGG + chr8.1:72743850-72743869 None:intergenic 40.0%
TTGCAAACCCAACCGTAATT+AGG + chr8.1:72742317-72742336 None:intergenic 40.0%
TTGGCTTAAGCCATAGAGTT+TGG + chr8.1:72744692-72744711 None:intergenic 40.0%
! AAGGCTGATCCTACCTATTT+TGG - chr8.1:72741360-72741379 MS.gene84262:intron 40.0%
! AGTCGTAATGGGAAGAAACA+TGG - chr8.1:72741736-72741755 MS.gene84262:CDS 40.0%
! AGTGGTCCTTTTACAAGCAT+TGG + chr8.1:72741781-72741800 None:intergenic 40.0%
! ATTGAACTTGGTGACACTGT+TGG + chr8.1:72745008-72745027 None:intergenic 40.0%
! CACATTGGTAGCTTCAACAA+GGG + chr8.1:72745075-72745094 None:intergenic 40.0%
! CGATTCCAGAATGTCTGTTT+TGG - chr8.1:72743077-72743096 MS.gene84262:intron 40.0%
! CTCAACTTCTCTAAGGGAAA+TGG - chr8.1:72743865-72743884 MS.gene84262:CDS 40.0%
! GATTGGTCACTCGAATAAGT+CGG - chr8.1:72743162-72743181 MS.gene84262:intron 40.0%
! GGAATATGGTTAGGTCTTGT+TGG - chr8.1:72742690-72742709 MS.gene84262:intron 40.0%
! GTCGTAATGGGAAGAAACAT+GGG - chr8.1:72741737-72741756 MS.gene84262:CDS 40.0%
! GTTGGAGTATCAAATTTGGC+TGG - chr8.1:72743577-72743596 MS.gene84262:intron 40.0%
! TCTCGTATTTTGCCTTGTGA+AGG - chr8.1:72743835-72743854 MS.gene84262:CDS 40.0%
!! ATGGCCATTTTCACAACTCA+TGG - chr8.1:72742831-72742850 MS.gene84262:CDS 40.0%
!! ATTGGGCTTTAGGCTAACTA+AGG + chr8.1:72743408-72743427 None:intergenic 40.0%
!! GCATGTATTGGTTCATCAGA+TGG + chr8.1:72744717-72744736 None:intergenic 40.0%
!! TTCCAGAATGTCTGTTTTGG+TGG - chr8.1:72743080-72743099 MS.gene84262:intron 40.0%
!!! GTCCTTTTACAAGCATTGGA+CGG + chr8.1:72741777-72741796 None:intergenic 40.0%
!!! TCCAGAATGTCTGTTTTGGT+GGG - chr8.1:72743081-72743100 MS.gene84262:intron 40.0%
AATCTCACCGACCATTTACG+GGG + chr8.1:72743146-72743165 None:intergenic 45.0%
AGGACCTAAACAAATGAGGC+AGG - chr8.1:72745292-72745311 MS.gene84262:CDS 45.0%
AGGTTCTTACAATCTAGGCG+CGG - chr8.1:72743796-72743815 MS.gene84262:CDS 45.0%
CAACAAGGGACTGATATGGA+AGG + chr8.1:72745061-72745080 None:intergenic 45.0%
CAACTTATGCTGCTAGCAGA+AGG - chr8.1:72743258-72743277 MS.gene84262:intron 45.0%
CAATCTCACCGACCATTTAC+GGG + chr8.1:72743147-72743166 None:intergenic 45.0%
CACATGTGCCAGAAATTGGT+AGG + chr8.1:72744590-72744609 None:intergenic 45.0%
CCAATCTCACCGACCATTTA+CGG + chr8.1:72743148-72743167 None:intergenic 45.0%
CCCTAGTTTCTACCTCTTCT+TGG - chr8.1:72743759-72743778 MS.gene84262:CDS 45.0%
CCTTGTGCACCAAAATAGGT+AGG + chr8.1:72741372-72741391 None:intergenic 45.0%
CGATGTTAGGTCCAAACAGT+TGG - chr8.1:72744736-72744755 MS.gene84262:CDS 45.0%
CGCCTTGGAATATCTGTTGA+AGG - chr8.1:72744246-72744265 MS.gene84262:intron 45.0%
GCGAAGGATTTGAAAGCAAC+TGG + chr8.1:72744218-72744237 None:intergenic 45.0%
GCTTCAACAAGGGACTGATA+TGG + chr8.1:72745065-72745084 None:intergenic 45.0%
GGAAACGATCAACCAAGAAG+AGG + chr8.1:72743774-72743793 None:intergenic 45.0%
GGAAGGACTTCTTTAGTGAG+TGG - chr8.1:72743333-72743352 MS.gene84262:intron 45.0%
GGACCTAACATCGCATGTAT+TGG + chr8.1:72744729-72744748 None:intergenic 45.0%
GGAGAGATATCTTTGCTTGC+TGG - chr8.1:72743598-72743617 MS.gene84262:intron 45.0%
GGCTTAAGCCATAGAGTTTG+GGG + chr8.1:72744690-72744709 None:intergenic 45.0%
GTAAGTAGGGATCATCGTCT+TGG + chr8.1:72742931-72742950 None:intergenic 45.0%
TGATGCAACCTTCAGAAGTG+AGG + chr8.1:72742782-72742801 None:intergenic 45.0%
TTGGAATGGTTGCAATCCAC+AGG + chr8.1:72743630-72743649 None:intergenic 45.0%
TTGGTTGAAGCAGGTCCATA+AGG + chr8.1:72744273-72744292 None:intergenic 45.0%
! AGGGAGCATAGTGAAGGAAA+AGG + chr8.1:72743743-72743762 None:intergenic 45.0%
! AGTGTGGGAGTTCTTGTTTC+AGG - chr8.1:72745272-72745291 MS.gene84262:CDS 45.0%
! AGTTGAACCGACTTACTTGC+AGG + chr8.1:72743243-72743262 None:intergenic 45.0%
! GAAACTAGGGAGCATAGTGA+AGG + chr8.1:72743749-72743768 None:intergenic 45.0%
! GCACATTGGTAGCTTCAACA+AGG + chr8.1:72745076-72745095 None:intergenic 45.0%
! GTTGAACCGACTTACTTGCA+GGG + chr8.1:72743242-72743261 None:intergenic 45.0%
! TAGGTCCAAACAGTTGGCTT+TGG - chr8.1:72744742-72744761 MS.gene84262:CDS 45.0%
! TGGGGATGAATTGGAGTATC+TGG + chr8.1:72744672-72744691 None:intergenic 45.0%
!! AAGCATTGGACGGTTCCATA+TGG + chr8.1:72741767-72741786 None:intergenic 45.0%
!! ATTGGTGGTGCTGTTGTTTC+TGG - chr8.1:72741266-72741285 MS.gene84262:CDS 45.0%
!! TTGGTGGTGCTGTTGTTTCT+GGG - chr8.1:72741267-72741286 MS.gene84262:CDS 45.0%
!!! CCTACCTATTTTGGTGCACA+AGG - chr8.1:72741369-72741388 MS.gene84262:intron 45.0%
!!! TTGTTTTTTCCGGTGACACG+TGG - chr8.1:72742732-72742751 MS.gene84262:intron 45.0%
!!! TCTTTTTTTTTTTTTTAATA+AGG + chr8.1:72743446-72743465 None:intergenic 5.0%
AACGCTCGATGAACAACGGA+AGG - chr8.1:72743316-72743335 MS.gene84262:intron 50.0%
ACAGATGATCCACGTGTCAC+CGG + chr8.1:72742744-72742763 None:intergenic 50.0%
ATCTCACCGACCATTTACGG+GGG + chr8.1:72743145-72743164 None:intergenic 50.0%
ATGAGTCCCCCGTAAATGGT+CGG - chr8.1:72743136-72743155 MS.gene84262:intron 50.0%
CAGGCATGACACACTTGTGA+TGG - chr8.1:72744419-72744438 MS.gene84262:intron 50.0%
CCAAGCCAAAGCCAACTGTT+TGG + chr8.1:72744750-72744769 None:intergenic 50.0%
CCCATACCCTGCAAGTAAGT+CGG - chr8.1:72743233-72743252 MS.gene84262:intron 50.0%
CCGACTTACTTGCAGGGTAT+GGG + chr8.1:72743236-72743255 None:intergenic 50.0%
CCGTAAATGGTCGGTGAGAT+TGG - chr8.1:72743145-72743164 MS.gene84262:intron 50.0%
GCCCACCAAAACAGACATTC+TGG + chr8.1:72743085-72743104 None:intergenic 50.0%
GTTGCCTAAAATCCGTGGCA+AGG - chr8.1:72741341-72741360 MS.gene84262:CDS 50.0%
! ACACTTGTGATGGTGAGTGG+AGG - chr8.1:72744429-72744448 MS.gene84262:intron 50.0%
! ACCGACTTACTTGCAGGGTA+TGG + chr8.1:72743237-72743256 None:intergenic 50.0%
! GACACACTTGTGATGGTGAG+TGG - chr8.1:72744426-72744445 MS.gene84262:intron 50.0%
! GTATTTAGCTCACGGGACCA+TGG - chr8.1:72743520-72743539 MS.gene84262:intron 50.0%
! TCAGCCTTGCCACGGATTTT+AGG + chr8.1:72741348-72741367 None:intergenic 50.0%
!! CCAAACAGTTGGCTTTGGCT+TGG - chr8.1:72744747-72744766 MS.gene84262:CDS 50.0%
!! TGCTTGCTGGTTTGTTCCTG+TGG - chr8.1:72743611-72743630 MS.gene84262:intron 50.0%
!! TTGGCTTGGACACATGCTCA+TGG - chr8.1:72742812-72742831 MS.gene84262:CDS 50.0%
AGGTAGGATCAGCCTTGCCA+CGG + chr8.1:72741356-72741375 None:intergenic 55.0%
! GTGATGGTGAGTGGAGGAAG+TGG - chr8.1:72744435-72744454 MS.gene84262:intron 55.0%
ATCTAGGCGCGGCGTTCGTT+TGG - chr8.1:72743807-72743826 MS.gene84262:CDS 60.0%
CCAAGGCGACCGATATGCGA+AGG + chr8.1:72744234-72744253 None:intergenic 60.0%
CCTTCGCATATCGGTCGCCT+TGG - chr8.1:72744231-72744250 MS.gene84262:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 72741234 72745385 72741234 ID=MS.gene84262
chr8.1 mRNA 72741234 72745385 72741234 ID=MS.gene84262.t1;Parent=MS.gene84262
chr8.1 exon 72745229 72745385 72745229 ID=MS.gene84262.t1.exon1;Parent=MS.gene84262.t1
chr8.1 CDS 72745229 72745385 72745229 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72744980 72745085 72744980 ID=MS.gene84262.t1.exon2;Parent=MS.gene84262.t1
chr8.1 CDS 72744980 72745085 72744980 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72744687 72744881 72744687 ID=MS.gene84262.t1.exon3;Parent=MS.gene84262.t1
chr8.1 CDS 72744687 72744881 72744687 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72743720 72743954 72743720 ID=MS.gene84262.t1.exon4;Parent=MS.gene84262.t1
chr8.1 CDS 72743720 72743954 72743720 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72742733 72743060 72742733 ID=MS.gene84262.t1.exon5;Parent=MS.gene84262.t1
chr8.1 CDS 72742733 72743060 72742733 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72742318 72742561 72742318 ID=MS.gene84262.t1.exon6;Parent=MS.gene84262.t1
chr8.1 CDS 72742318 72742561 72742318 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72741497 72742197 72741497 ID=MS.gene84262.t1.exon7;Parent=MS.gene84262.t1
chr8.1 CDS 72741497 72742197 72741497 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
chr8.1 exon 72741234 72741373 72741234 ID=MS.gene84262.t1.exon8;Parent=MS.gene84262.t1
chr8.1 CDS 72741234 72741373 72741234 ID=cds.MS.gene84262.t1;Parent=MS.gene84262.t1
Gene Sequence

>MS.gene84262

ATGGCTCGTGAGGCTCAATCTATAATAAGGTTATTGGTGGTGCTGTTGTTTCTGGGTTTTATTATGATTTGGATAATGATGCCTACAAATACTTTCAACGTAAAATGGTTGCCTAAAATCCGTGGCAAGGCTGATCCTACCTATTTTGGTGCACAAGGTATATATTTTTATTTTTTATTCAAATATTATGCATTTCACCTTTTTGTATGCTTGCGTTCATTAACTACTTTATGCTGATTAATAAACATAATAATATTCATATCATATCATATAATATAATATTAATTGTTCTTATTTCAGGTGAAACGATCCTTATGTACACTTTTCCAGTCTTGTTAATAGCTACTTTGGGATGTGTCTATCTACACATAGCCAAAAAATCATCAAATGAGAGCAACATAGAAATGTAATAATTTTTTTTAACCTTAATCTAGTTATCCCTATTTGTGCTATACTCTAATTTGCATCTATTAATATATGTATTTTTTTTTTTTGCACAATCAGTCGTAATGGGAAGAAACATGGGACAACCATATGGAACCGTCCAATGCTTGTAAAAGGACCACTTGGAATTGTTTCTATCACAGAGATAGCATTCTTGCTCATGTTCATTGCACTTCTTGTTTGGTCTTTTACAACTTATTTGCACATCGGTTTTAAAACAGTCTCAAAAATAGCGGCAGAGTACGGCAATACAGTGTAATTATTTCTTTCCCTCAAACACTTAGCAACGATATTAATAGCTTATAAGAATGTTTTTGTAATTTATAAATAATTTCTTAAAATGTGTGAAGTAAAATAATCTTGTTCACAAAAAGGACAAGATAGAGTATCTTATCATACCTATTAATTAGGTTTTGAATCACACAATGCAATGTTGAAAAGTTGAGAACATGTCTCTTCTTCAAGAAAATATTATCAGTTTGATTCTTGGAGATGTCTATATAAAAGTAGCTCAACCTTAATAAAAAATAAAAACAGATATTCAACCGTCAACTTCATAATTAATCTTATGGTAGACCCAAAGACCTAAACCTTAAAAATACCATGTGGTTGTGGTACCTATTAAAGGTTAAACATCCTAATTACGGTTGGGTTTGCAAAAATAAATATTGACTGCATTTGTGGTAACAATCACAATATGTGTTTTGAACCAAAATATTGTGAAAAGCTATGATCAGCTTTTTTCCAATTACTAAAAATATTGTATTGATAATAGTTGAAGAAACAACGTATGGAACGCTACTTCAATTTCAGTCGTAGATAGATAAGTTTGTTATTATATTGAATTGTACTATCAACACATTTTTGAACACTTAAATAAGTTTTAACTAACAAATAAAAATATAATTTTAAAGTGTGCGTTAGAAAGTATATGTTATCAACATTATTTATGTGCTGTAGTGTTATATTGTGGTGTTTTTTTTACAGTGAGCAAGAGAAGTTGTATAGTGTGGGAATATGGTTAGGTCTTGTTGGGAACATATGTTTGGCATTCTTGTTTTTTCCGGTGACACGTGGATCATCTGTGCTACCAATATTTGGCCTCACTTCTGAAGGTTGCATCAAGTATCATATTTGGCTTGGACACATGCTCATGGCCATTTTCACAACTCATGGAATTTGTTACATCATCCATTGGGCATCTACTAATCAAATGTCAGAGGTTAGTTAGTCATCAATTATAATCAAGACCAAGACGATGATCCCTACTTACCTGTGATTTAATTTAAGAGTTAACCCAAGAGTAAGATTAAGATTAAATTAATACATTTTTTGAAAATTATCTTTTTATTGCTAAAGAAAATGTATACAACAGTTATTCATCTTAATGTCTTGGGTTCGATTCCAGAATGTCTGTTTTGGTGGGCTGATCCATATAGATCTTTGCTTTGACTTTAAATGAGTCCCCCGTAAATGGTCGGTGAGATTGGTCACTCGAATAAGTCGGTAATCCTTAGATTGAATATTGACTTTTCAAAAAAAAAAAAAAAAAATACCCATACCCTGCAAGTAAGTCGGTTCAACTTATGCTGCTAGCAGAAGGACCTCCTTAGTGAGTGATATGTAAGCACCTCTATTAACGCTCGATGAACAACGGAAGGACTTCTTTAGTGAGTGGTTTGTAAACACCTCTATTAACGTTTGTTGAATTTTGATGTATGTCTTCACCTTAGTTAGCCTAAAGCCCAATTCACATAAAAATTTTCCTTATTAAAAAAAAAAAAAAGAAAATGTATACAAGTATCATTAATGCCTTTTCAAGTTATTTTTGTCTTTAGTATTGTATTTAGCTCACGGGACCATGGCTTTAAATCATTGCAGATGTTGATATGGACCAAAGTTGGAGTATCAAATTTGGCTGGAGAGATATCTTTGCTTGCTGGTTTGTTCCTGTGGATTGCAACCATTCCAAGAATTAGGAGAAAATTCTTTGAGCTCTTTTTTTACACACATCACCTCTACGTAATCTTCATCATCTTCTACATATTTCATGTTGACATTTCCTTTTCCTTCACTATGCTCCCTAGTTTCTACCTCTTCTTGGTTGATCGTTTCCTAAGGTTCTTACAATCTAGGCGCGGCGTTCGTTTGGTTTCATCTCGTATTTTGCCTTGTGAAGGTGTAGAACTCAACTTCTCTAAGGGAAATGGTAATTAATATTATCTTAAAGTAAACTCATAGGTCCTATTCGAATTAATTTATTTGAACTTATCTACTAACACAACTGTTTGAGAGAGCTTAAAGAAATTACTTATGGCATATTCTTAAGTTATTTTCAGCTTATAATTTTTAAGAACTAATGTGATATGTTTTTTTGCAGGGGTGACTTATAATCCCACAAGTGTAATGTTCATAAATGTACCAAGCATATCAAAGTTGCAATGGCATCCATTTACTGTTACTTCTAATAGTAAATTGGAACCAGAAAAGCTAAGTGTTGTCATTAAATGTGGAGGAAATTGGACACAGAAGCTCTACCAGTTGCTTTCAAATCCTTCGCATATCGGTCGCCTTGGAATATCTGTTGAAGGTCCTTATGGACCTGCTTCAACCAATTACTTAAGGTCTCTACATCTTAAAAAATTAAAACCAATTTGAAGTATAGATATAAGATTGTCTTTTGCTTTGTTAGAAATAATTTCATTAATTTTTCACATAGTAACTTATGTTTGTTCTTCTATCAGGCATGACACACTTGTGATGGTGAGTGGAGGAAGTGGTATCACACCATTTATCTCTATCATTAGAGAGCTAATATATCTTAGCACTACATTCAAATGCAAAACACCAAACATTGTCCTAATTTCTTCATTCAAGAACACTTCATGTCTATCAATGCTAGATTTGATCCTACCAATTTCTGGCACATGTGACATTTCTAATATTCAACTCCAAATTGAGGCATACATCACAAGAGACAAAGAGTTTAAACCAGATACTCCAATTCATCCCCAAACTCTATGGCTTAAGCCAAATCCATCTGATGAACCAATACATGCGATGTTAGGTCCAAACAGTTGGCTTTGGCTTGGTGCGATAATCTCATCCTCATTCATCATCTTCCTTATTATAATCGGAGTCATTACTCGTTACTACATTTTCCCTATCGATCATAACACAAATGCAATATTCTCGGATCCTTTAAGGGCATTCCTTAACATGCTAGTAATATGTGTGTCGATAGCTGTTGTTTCAAGTGTAGCTGTCTTATGGAACAAACAAAATGCTAAAGAAGCAAAACAGATTCAACACTTGGAAGGGTCATCACCAACAGTGTCACCAAGTTCAATGATTTACAATGCTGATAGAGAATTAGAATGCCTTCCATATCAGTCCCTTGTTGAAGCTACCAATGTGCATTATGGTCAAAGACCTGATCTTAAAAGTAAGTCATTTAATTTATCTCTAGAGAAAATATTTTTGATATATTTTAAAGTTGTAAAATATAAGTTATTTACAACAATCTCCATTTATCTCTATGAATTGAAATCACTCTTTTTTGTTACAGGACTTCTATTTGAAATCAAAGGGTCAAGTGTGGGAGTTCTTGTTTCAGGACCTAAACAAATGAGGCAGGAAGTTGCATCCATTTGTTCATCTGGTTTAGTTGAAAATTTGCATTTTGAATCAATCAGTTTTACTTGGTAA
Protein sequence

>MS.gene84262.t1

MAREAQSIIRLLVVLLFLGFIMIWIMMPTNTFNVKWLPKIRGKADPTYFGAQGETILMYTFPVLLIATLGCVYLHIAKKSSNESNIEIRNGKKHGTTIWNRPMLVKGPLGIVSITEIAFLLMFIALLVWSFTTYLHIGFKTVSKIAAEYGNTVEQEKLYSVGIWLGLVGNICLAFLFFPVTRGSSVLPIFGLTSEGCIKYHIWLGHMLMAIFTTHGICYIIHWASTNQMSEMLIWTKVGVSNLAGEISLLAGLFLWIATIPRIRRKFFELFFYTHHLYVIFIIFYIFHVDISFSFTMLPSFYLFLVDRFLRFLQSRRGVRLVSSRILPCEGVELNFSKGNGVTYNPTSVMFINVPSISKLQWHPFTVTSNSKLEPEKLSVVIKCGGNWTQKLYQLLSNPSHIGRLGISVEGPYGPASTNYLRHDTLVMVSGGSGITPFISIIRELIYLSTTFKCKTPNIVLISSFKNTSCLSMLDLILPISGTCDISNIQLQIEAYITRDKEFKPDTPIHPQTLWLKPNPSDEPIHAMLGPNSWLWLGAIISSSFIIFLIIIGVITRYYIFPIDHNTNAIFSDPLRAFLNMLVICVSIAVVSSVAVLWNKQNAKEAKQIQHLEGSSPTVSPSSMIYNADRELECLPYQSLVEATNVHYGQRPDLKRLLFEIKGSSVGVLVSGPKQMRQEVASICSSGLVENLHFESISFTW