AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84414

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84414.t1 MTR_2g460780 97.674 172 4 0 1 172 49 220 5.00e-123 346
MS.gene84414.t1 MTR_2g460780 94.186 172 4 1 1 172 49 214 8.64e-116 327
MS.gene84414.t1 MTR_2g460780 89.535 172 4 1 1 172 49 206 1.75e-108 308
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84414.t1 AT5G57950 58.046 174 70 2 1 172 48 220 6.30e-65 199
MS.gene84414.t1 AT5G57950 57.803 173 72 1 1 172 77 249 1.73e-64 198

Find 42 sgRNAs with CRISPR-Local

Find 176 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCAAGGCAGAGGTTTAC+TGG 0.266830 2.4:+37358888 MS.gene84414:CDS
TTGTTTGACCCATGCTCGAC+TGG 0.343385 2.4:-37358807 None:intergenic
AACTAGTGGAACGTCGATAT+CGG 0.367013 2.4:-37357076 None:intergenic
ACATCCACATCCATCGAGTT+GGG 0.410980 2.4:-37358637 None:intergenic
ACCCATGCTCGACTGGGCCT+CGG 0.418523 2.4:-37358800 None:intergenic
TTCCGAGGCCCAGTCGAGCA+TGG 0.452146 2.4:+37358798 MS.gene84414:CDS
TGAAAATTTGCTCCATAGGT+TGG 0.465291 2.4:+37358774 MS.gene84414:CDS
AAATTTGGCAACGTCGAAGC+AGG 0.480789 2.4:+37358751 MS.gene84414:CDS
AGATGCATCACCAGCGGTAG+AGG 0.486723 2.4:+37358699 MS.gene84414:CDS
ATCTCGTCAACCACTGCAAA+GGG 0.491382 2.4:-37358673 None:intergenic
CCTCTGCCTTGCCAAGTCCT+AGG 0.496210 2.4:-37358880 None:intergenic
TTCCGCTAAGACAATGATGA+TGG 0.500406 2.4:+37358538 MS.gene84414:intron
GTAGAGGATGGTTTACAGCT+TGG 0.500978 2.4:+37358715 MS.gene84414:CDS
GGGCCTCGGAAGCCAACCTA+TGG 0.501119 2.4:-37358786 None:intergenic
CAGGTGAAAATTTGCTCCAT+AGG 0.501246 2.4:+37358770 MS.gene84414:CDS
TGGCAAGGCAGAGGTTTACT+GGG 0.504955 2.4:+37358889 MS.gene84414:CDS
CTCGATGGATGTGGATGTCT+TGG 0.513868 2.4:+37358642 MS.gene84414:CDS
CGTCGTTCAGCTCGAACTAG+TGG 0.519791 2.4:-37357090 None:intergenic
ATTAATCTTATCAGTTATGT+CGG 0.522206 2.4:-37357142 None:intergenic
TCCGAGGCCCAGTCGAGCAT+GGG 0.530910 2.4:+37358799 MS.gene84414:CDS
GACATCCACATCCATCGAGT+TGG 0.533268 2.4:-37358638 None:intergenic
CCTTGCCTCATGATGACAAC+AGG 0.536038 2.4:-37358832 None:intergenic
GCTCCATAGGTTGGCTTCCG+AGG 0.537445 2.4:+37358783 MS.gene84414:CDS
TTTATGATTTCCAAGTCTTG+AGG 0.549764 2.4:-37357187 None:intergenic
TGTTTGACCCATGCTCGACT+GGG 0.552241 2.4:-37358806 None:intergenic
CCTAGGACTTGGCAAGGCAG+AGG 0.560284 2.4:+37358880 MS.gene84414:CDS
TGTAAACCATCCTCTACCGC+TGG 0.574232 2.4:-37358709 None:intergenic
TATCTCGTCAACCACTGCAA+AGG 0.575740 2.4:-37358674 None:intergenic
TAACTGTTACACCTAGGACT+TGG 0.577662 2.4:+37358869 MS.gene84414:CDS
CATCCACATCCATCGAGTTG+GGG 0.579168 2.4:-37358636 None:intergenic
AACAGTTTCTGCAGTAGATG+AGG 0.592840 2.4:-37358575 None:intergenic
GGTTAGTAGACCCTTTGCAG+TGG 0.593357 2.4:+37358663 MS.gene84414:CDS
GCATCACCAGCGGTAGAGGA+TGG 0.605132 2.4:+37358703 MS.gene84414:CDS
CAATACCTGTTGTCATCATG+AGG 0.605657 2.4:+37358827 MS.gene84414:CDS
CCTGTTGTCATCATGAGGCA+AGG 0.626933 2.4:+37358832 MS.gene84414:CDS
GTTACACCTAGGACTTGGCA+AGG 0.647181 2.4:+37358874 MS.gene84414:CDS
CTCACAAGGACATTCTGTGA+TGG 0.663425 2.4:-37358607 None:intergenic
ATCCACATCCATCGAGTTGG+GGG 0.663720 2.4:-37358635 None:intergenic
TCAACTTAACTGTTACACCT+AGG 0.680007 2.4:+37358863 MS.gene84414:CDS
GGCAAGGCAGAGGTTTACTG+GGG 0.698130 2.4:+37358890 MS.gene84414:CDS
GATAGCAGATGCATCACCAG+CGG 0.721340 2.4:+37358693 MS.gene84414:CDS
GGAACGTCGATATCGGAACG+AGG 0.742960 2.4:-37357069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATTTTCTTAAATTATTAT+TGG - chr2.4:37357277-37357296 None:intergenic 10.0%
!! AACTTCAAAAATATCAATAA+TGG - chr2.4:37357679-37357698 None:intergenic 15.0%
!! ATTCATAATATGAAACAAAA+GGG - chr2.4:37358074-37358093 None:intergenic 15.0%
!! TATTCATAATATGAAACAAA+AGG - chr2.4:37358075-37358094 None:intergenic 15.0%
!! TCTAGTATTAAATTTATTAG+TGG + chr2.4:37358156-37358175 MS.gene84414:intron 15.0%
!! TTATATATGAAAAGCTTAAT+AGG - chr2.4:37357648-37357667 None:intergenic 15.0%
!!! GTTATTGTTTTACTATTTAT+AGG - chr2.4:37357430-37357449 None:intergenic 15.0%
!! ATTAATCTTATCAGTTATGT+CGG - chr2.4:37357145-37357164 None:intergenic 20.0%
!! TAAAGCCTATTTAATTAAAC+AGG + chr2.4:37357577-37357596 MS.gene84414:intron 20.0%
!! TAAATAATGAATTCTTACGA+AGG - chr2.4:37357767-37357786 None:intergenic 20.0%
!! TTATTTAGTAGCTGATATAT+TGG + chr2.4:37357731-37357750 MS.gene84414:intron 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr2.4:37357870-37357889 MS.gene84414:intron 20.0%
!!! CATAAATATTGTTTTCTGAA+TGG + chr2.4:37358441-37358460 MS.gene84414:intron 20.0%
!!! GAAATTTTGAGTAATACTTA+AGG + chr2.4:37358101-37358120 MS.gene84414:intron 20.0%
!!! GTATTTCTTTTTGAATAGTA+TGG + chr2.4:37358131-37358150 MS.gene84414:intron 20.0%
! AAAACATATTTGTGTGCTTT+AGG + chr2.4:37357791-37357810 MS.gene84414:intron 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr2.4:37357817-37357836 None:intergenic 25.0%
! CTTGGAAATCATAAAAATTC+AGG + chr2.4:37357195-37357214 MS.gene84414:CDS 25.0%
! GAAATCATAAAAATTCAGGT+TGG + chr2.4:37357199-37357218 MS.gene84414:intron 25.0%
! GCTGTACTTATATTATTGAA+AGG - chr2.4:37358358-37358377 None:intergenic 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr2.4:37357867-37357886 None:intergenic 25.0%
!! TAATTTGGTATAAGCCATTT+TGG + chr2.4:37358038-37358057 MS.gene84414:intron 25.0%
!!! GGAGATCAAATTTTGAAATT+TGG + chr2.4:37358736-37358755 MS.gene84414:CDS 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr2.4:37357817-37357836 MS.gene84414:intron 25.0%
AACTTGTACTAGTTGTATGT+AGG + chr2.4:37357447-37357466 MS.gene84414:intron 30.0%
ACTTGTACTAGTTGTATGTA+GGG + chr2.4:37357448-37357467 MS.gene84414:intron 30.0%
ATATGAAAAGCTTAATAGGC+CGG - chr2.4:37357644-37357663 None:intergenic 30.0%
ATGGCTTATACCAAATTACA+TGG - chr2.4:37358036-37358055 None:intergenic 30.0%
ATGTAAACCTACTCCTAAAT+AGG - chr2.4:37357833-37357852 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG - chr2.4:37357970-37357989 None:intergenic 30.0%
TTTATGATTTCCAAGTCTTG+AGG - chr2.4:37357190-37357209 None:intergenic 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG + chr2.4:37357807-37357826 MS.gene84414:intron 30.0%
! GAAACTTCACAATCAGATTT+TGG - chr2.4:37358328-37358347 None:intergenic 30.0%
!! ATCAGATTTTGGCATCTTTT+CGG - chr2.4:37358317-37358336 None:intergenic 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG + chr2.4:37357964-37357983 MS.gene84414:intron 30.0%
AAAAATTATAGGCCTGAGTC+TGG - chr2.4:37357959-37357978 None:intergenic 35.0%
AACATCTCTGTTGTCAAAAG+CGG + chr2.4:37357311-37357330 MS.gene84414:intron 35.0%
AACGCAAGCATTCATATGAT+TGG + chr2.4:37357708-37357727 MS.gene84414:intron 35.0%
ACCTTGTTAATAAACGAGCT+GGG - chr2.4:37357540-37357559 None:intergenic 35.0%
AGGGATAGCAAAATCCAAAA+TGG - chr2.4:37358055-37358074 None:intergenic 35.0%
CCTATTTAATTAAACAGGCC+AGG + chr2.4:37357582-37357601 MS.gene84414:intron 35.0%
CCTGGCCTGTTTAATTAAAT+AGG - chr2.4:37357585-37357604 None:intergenic 35.0%
CTTGTACTAGTTGTATGTAG+GGG + chr2.4:37357449-37357468 MS.gene84414:intron 35.0%
GCTTATACCAAATTACATGG+TGG - chr2.4:37358033-37358052 None:intergenic 35.0%
TACTATTTATAGGTCCGCTT+TGG - chr2.4:37357420-37357439 None:intergenic 35.0%
TCAACTTAACTGTTACACCT+AGG + chr2.4:37358863-37358882 MS.gene84414:CDS 35.0%
TTGTACTAGTTGTATGTAGG+GGG + chr2.4:37357450-37357469 MS.gene84414:intron 35.0%
! ACCAAATTACATGGTGGAAA+TGG - chr2.4:37358027-37358046 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + chr2.4:37357878-37357897 MS.gene84414:intron 35.0%
! ATTTTGCATTCCTCAAGACT+TGG + chr2.4:37357177-37357196 MS.gene84414:CDS 35.0%
! CCAAATTACATGGTGGAAAT+GGG - chr2.4:37358026-37358045 None:intergenic 35.0%
! TGAAAATTTGCTCCATAGGT+TGG + chr2.4:37358774-37358793 MS.gene84414:CDS 35.0%
! TTTTCGCCTGGCATTTTTAA+AGG - chr2.4:37357914-37357933 None:intergenic 35.0%
! TTTTGGCATCTTTTCGGATT+AGG - chr2.4:37358311-37358330 None:intergenic 35.0%
AACAGTTTCTGCAGTAGATG+AGG - chr2.4:37358578-37358597 None:intergenic 40.0%
AACTAGTGGAACGTCGATAT+CGG - chr2.4:37357079-37357098 None:intergenic 40.0%
ACCCAGCTCGTTTATTAACA+AGG + chr2.4:37357536-37357555 MS.gene84414:intron 40.0%
AGCCATCATCATTGTCTTAG+CGG - chr2.4:37358543-37358562 None:intergenic 40.0%
CAATACCTGTTGTCATCATG+AGG + chr2.4:37358827-37358846 MS.gene84414:CDS 40.0%
CCCATTTCCACCATGTAATT+TGG + chr2.4:37358023-37358042 MS.gene84414:intron 40.0%
GACCTTGTTAATAAACGAGC+TGG - chr2.4:37357541-37357560 None:intergenic 40.0%
GTAAACATACGTGTCAGTGT+CGG + chr2.4:37358273-37358292 MS.gene84414:intron 40.0%
GTAGGTTTACATATGTTGCC+AGG + chr2.4:37357841-37357860 MS.gene84414:intron 40.0%
GTTTACCTCTGTTGTCAATG+CGG - chr2.4:37358259-37358278 None:intergenic 40.0%
TAAACATACGTGTCAGTGTC+GGG + chr2.4:37358274-37358293 MS.gene84414:intron 40.0%
TAACTGTTACACCTAGGACT+TGG + chr2.4:37358869-37358888 MS.gene84414:CDS 40.0%
TAATTAAACAGGCCAGGCTA+AGG + chr2.4:37357588-37357607 MS.gene84414:intron 40.0%
TATTTATAGGTCCGCTTTGG+CGG - chr2.4:37357417-37357436 None:intergenic 40.0%
TTCCGCTAAGACAATGATGA+TGG + chr2.4:37358538-37358557 MS.gene84414:intron 40.0%
! ATCAGGCCTTTAAAAATGCC+AGG + chr2.4:37357905-37357924 MS.gene84414:intron 40.0%
! CAGGTGAAAATTTGCTCCAT+AGG + chr2.4:37358770-37358789 MS.gene84414:CDS 40.0%
!! AGCTAGGCTTTAAATAGGCT+GGG - chr2.4:37357514-37357533 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG + chr2.4:37357823-37357842 MS.gene84414:intron 40.0%
!!! TTTTGAAGTAGGCCAGACTT+AGG + chr2.4:37357975-37357994 MS.gene84414:intron 40.0%
AAAATCAAGACCACCGCATC+AGG + chr2.4:37357366-37357385 MS.gene84414:intron 45.0%
AAATTTGGCAACGTCGAAGC+AGG + chr2.4:37358751-37358770 MS.gene84414:CDS 45.0%
ACATCCACATCCATCGAGTT+GGG - chr2.4:37358640-37358659 None:intergenic 45.0%
ACTAGTTGTATGTAGGGGGT+GGG + chr2.4:37357454-37357473 MS.gene84414:intron 45.0%
AGGCGAAAATGAGCCTATGA+CGG + chr2.4:37357925-37357944 MS.gene84414:intron 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr2.4:37357888-37357907 MS.gene84414:intron 45.0%
ATCTCGTCAACCACTGCAAA+GGG - chr2.4:37358676-37358695 None:intergenic 45.0%
CTCACAAGGACATTCTGTGA+TGG - chr2.4:37358610-37358629 None:intergenic 45.0%
CTGTTGTCAATGCGGAAATG+CGG - chr2.4:37358251-37358270 None:intergenic 45.0%
CTTCGTGTCTCGTGTTTCAT+AGG - chr2.4:37357238-37357257 None:intergenic 45.0%
GCCAGGCCTTAGCATAAAAT+AGG + chr2.4:37357858-37357877 MS.gene84414:intron 45.0%
GTAGAGGATGGTTTACAGCT+TGG + chr2.4:37358715-37358734 MS.gene84414:CDS 45.0%
TACTAGTTGTATGTAGGGGG+TGG + chr2.4:37357453-37357472 MS.gene84414:intron 45.0%
TATCTCGTCAACCACTGCAA+AGG - chr2.4:37358677-37358696 None:intergenic 45.0%
! CATTTCCGCATTGACAACAG+AGG + chr2.4:37358251-37358270 MS.gene84414:intron 45.0%
! GCCTATTTTATGCTAAGGCC+TGG - chr2.4:37357862-37357881 None:intergenic 45.0%
! TTACATGGTGGAAATGGGCT+AGG - chr2.4:37358021-37358040 None:intergenic 45.0%
!! ATGAGCCTATGACGGGTAAT+AGG + chr2.4:37357933-37357952 MS.gene84414:intron 45.0%
!! GAGCTAGGCTTTAAATAGGC+TGG - chr2.4:37357515-37357534 None:intergenic 45.0%
!! GGTCGAGCTAGGCTTTAAAT+AGG - chr2.4:37357519-37357538 None:intergenic 45.0%
!!! CTTTTTTGCAAGCCTTAGCC+TGG - chr2.4:37357603-37357622 None:intergenic 45.0%
AGCTTAATAGGCCGGTCTGA+TGG - chr2.4:37357636-37357655 None:intergenic 50.0%
AGTTGGGGGAAAGACTCACA+AGG - chr2.4:37358624-37358643 None:intergenic 50.0%
CCTGTTGTCATCATGAGGCA+AGG + chr2.4:37358832-37358851 MS.gene84414:CDS 50.0%
CCTTGCCTCATGATGACAAC+AGG - chr2.4:37358835-37358854 None:intergenic 50.0%
CTCGATGGATGTGGATGTCT+TGG + chr2.4:37358642-37358661 MS.gene84414:CDS 50.0%
GACATCCACATCCATCGAGT+TGG - chr2.4:37358641-37358660 None:intergenic 50.0%
GACTTAGGCCTTACAAAGCC+CGG + chr2.4:37357990-37358009 MS.gene84414:intron 50.0%
GATAGCAGATGCATCACCAG+CGG + chr2.4:37358693-37358712 MS.gene84414:CDS 50.0%
GCCTATTAAGCCCATCAGAC+CGG + chr2.4:37357622-37357641 MS.gene84414:intron 50.0%
GCTTAATAGGCCGGTCTGAT+GGG - chr2.4:37357635-37357654 None:intergenic 50.0%
GGCGAAAATGAGCCTATGAC+GGG + chr2.4:37357926-37357945 MS.gene84414:intron 50.0%
GGTTAGTAGACCCTTTGCAG+TGG + chr2.4:37358663-37358682 MS.gene84414:CDS 50.0%
GTTACACCTAGGACTTGGCA+AGG + chr2.4:37358874-37358893 MS.gene84414:CDS 50.0%
TCTGGCCTATTACCCGTCAT+AGG - chr2.4:37357941-37357960 None:intergenic 50.0%
TGGCAAGGCAGAGGTTTACT+GGG + chr2.4:37358889-37358908 MS.gene84414:CDS 50.0%
TGTAAACCATCCTCTACCGC+TGG - chr2.4:37358712-37358731 None:intergenic 50.0%
TGTTTGACCCATGCTCGACT+GGG - chr2.4:37358809-37358828 None:intergenic 50.0%
TTGGCAAGGCAGAGGTTTAC+TGG + chr2.4:37358888-37358907 MS.gene84414:CDS 50.0%
TTGTTTGACCCATGCTCGAC+TGG - chr2.4:37358810-37358829 None:intergenic 50.0%
! CATCCACATCCATCGAGTTG+GGG - chr2.4:37358639-37358658 None:intergenic 50.0%
! GGCTTTGTAAGGCCTAAGTC+TGG - chr2.4:37357990-37358009 None:intergenic 50.0%
! GTCATAGGCTCATTTTCGCC+TGG - chr2.4:37357926-37357945 None:intergenic 50.0%
!! ATCCACATCCATCGAGTTGG+GGG - chr2.4:37358638-37358657 None:intergenic 50.0%
ACGGGTAATAGGCCAGACTC+AGG + chr2.4:37357944-37357963 MS.gene84414:intron 55.0%
AGATGCATCACCAGCGGTAG+AGG + chr2.4:37358699-37358718 MS.gene84414:CDS 55.0%
CACCGCGCCAATTATTGGGT+TGG + chr2.4:37358220-37358239 MS.gene84414:intron 55.0%
CCTGCACCGCGCCAATTATT+GGG + chr2.4:37358216-37358235 MS.gene84414:intron 55.0%
CGTCGTTCAGCTCGAACTAG+TGG - chr2.4:37357093-37357112 None:intergenic 55.0%
GAAGTGGAAAGCCGCCAAAG+CGG + chr2.4:37357403-37357422 MS.gene84414:intron 55.0%
GAGTCTTTCCCCCAACTCGA+TGG + chr2.4:37358627-37358646 MS.gene84414:CDS 55.0%
GCAAGGCAGAGGTTTACTGG+GGG + chr2.4:37358891-37358910 MS.gene84414:CDS 55.0%
GGAACGTCGATATCGGAACG+AGG - chr2.4:37357072-37357091 None:intergenic 55.0%
GGCAAGGCAGAGGTTTACTG+GGG + chr2.4:37358890-37358909 MS.gene84414:CDS 55.0%
GGCCAACCCAATAATTGGCG+CGG - chr2.4:37358225-37358244 None:intergenic 55.0%
GTTGTCAAAAGCGGTTGCGC+CGG + chr2.4:37357320-37357339 MS.gene84414:intron 55.0%
TAAACGAGCTGGGTCGAGCT+AGG - chr2.4:37357530-37357549 None:intergenic 55.0%
TCCTGCACCGCGCCAATTAT+TGG + chr2.4:37358215-37358234 MS.gene84414:intron 55.0%
TGTATGTAGGGGGTGGGAAC+AGG + chr2.4:37357460-37357479 MS.gene84414:intron 55.0%
TTCCCCCAACTCGATGGATG+TGG + chr2.4:37358633-37358652 MS.gene84414:CDS 55.0%
! ATACGTGTCAGTGTCGGGCA+CGG + chr2.4:37358279-37358298 MS.gene84414:intron 55.0%
!! ATGGTGGAAATGGGCTAGGC+CGG - chr2.4:37358017-37358036 None:intergenic 55.0%
!! GCCGGTCTGATGGGCTTAAT+AGG - chr2.4:37357626-37357645 None:intergenic 55.0%
AATTGGCGCGGTGCAGGAGT+GGG - chr2.4:37358213-37358232 None:intergenic 60.0%
ATGTAGGGGGTGGGAACAGG+CGG + chr2.4:37357463-37357482 MS.gene84414:intron 60.0%
CCCAATAATTGGCGCGGTGC+AGG - chr2.4:37358219-37358238 None:intergenic 60.0%
CCTAGGACTTGGCAAGGCAG+AGG + chr2.4:37358880-37358899 MS.gene84414:CDS 60.0%
CCTCTGCCTTGCCAAGTCCT+AGG - chr2.4:37358883-37358902 None:intergenic 60.0%
GCATCACCAGCGGTAGAGGA+TGG + chr2.4:37358703-37358722 MS.gene84414:CDS 60.0%
GGCGCGGCCAACCCAATAAT+TGG - chr2.4:37358230-37358249 None:intergenic 60.0%
GTCAATGCGGAAATGCGGCG+CGG - chr2.4:37358246-37358265 None:intergenic 60.0%
TAATTGGCGCGGTGCAGGAG+TGG - chr2.4:37358214-37358233 None:intergenic 60.0%
TCCGCTCCGCTCCGATATAG+CGG - chr2.4:37357346-37357365 None:intergenic 60.0%
! TACGTGTCAGTGTCGGGCAC+GGG + chr2.4:37358280-37358299 MS.gene84414:intron 60.0%
!! GCTCCATAGGTTGGCTTCCG+AGG + chr2.4:37358783-37358802 MS.gene84414:CDS 60.0%
!! TGGTGGAAATGGGCTAGGCC+GGG - chr2.4:37358016-37358035 None:intergenic 60.0%
ACCCATGCTCGACTGGGCCT+CGG - chr2.4:37358803-37358822 None:intergenic 65.0%
AGGACGTCCGACAGGGGCTA+CGG + chr2.4:37357488-37357507 MS.gene84414:intron 65.0%
AGGCCTTACAAAGCCCGGCC+CGG + chr2.4:37357995-37358014 MS.gene84414:intron 65.0%
ATTGGCGCGGTGCAGGAGTG+GGG - chr2.4:37358212-37358231 None:intergenic 65.0%
CTCCGCTCCGATATAGCGGC+CGG - chr2.4:37357342-37357361 None:intergenic 65.0%
GACGTGCGCGTAGCCTGATG+CGG - chr2.4:37357382-37357401 None:intergenic 65.0%
GCCGCTATATCGGAGCGGAG+CGG + chr2.4:37357342-37357361 MS.gene84414:intron 65.0%
GGCTACGCGCACGTCAGAAG+TGG + chr2.4:37357387-37357406 MS.gene84414:intron 65.0%
GGGCCTCGGAAGCCAACCTA+TGG - chr2.4:37358789-37358808 None:intergenic 65.0%
TCCGAGGCCCAGTCGAGCAT+GGG + chr2.4:37358799-37358818 MS.gene84414:CDS 65.0%
TTCCGAGGCCCAGTCGAGCA+TGG + chr2.4:37358798-37358817 MS.gene84414:CDS 65.0%
! GGTTGCGCCGGCCGCTATAT+CGG + chr2.4:37357332-37357351 MS.gene84414:intron 65.0%
!! GCGCGTAGCGGGCGCTATTT+CGG - chr2.4:37358190-37358209 None:intergenic 65.0%
CGCCGGCCGCTATATCGGAG+CGG + chr2.4:37357337-37357356 MS.gene84414:intron 70.0%
GTAGCCCCTGTCGGACGTCC+TGG - chr2.4:37357489-37357508 None:intergenic 70.0%
GTGCGCGTAGCCTGATGCGG+TGG - chr2.4:37357379-37357398 None:intergenic 70.0%
TGCAGGAGTGGGGCGCGTAG+CGG - chr2.4:37358202-37358221 None:intergenic 70.0%
! AGGCCGGGCCGGGCTTTGTA+AGG - chr2.4:37358001-37358020 None:intergenic 70.0%
!! GAAATGGGCTAGGCCGGGCC+GGG - chr2.4:37358011-37358030 None:intergenic 70.0%
!! GGAAATGGGCTAGGCCGGGC+CGG - chr2.4:37358012-37358031 None:intergenic 70.0%
AGGCGGCCAGGACGTCCGAC+AGG + chr2.4:37357480-37357499 MS.gene84414:intron 75.0%
GCAGGAGTGGGGCGCGTAGC+GGG - chr2.4:37358201-37358220 None:intergenic 75.0%
GCGGCCAGGACGTCCGACAG+GGG + chr2.4:37357482-37357501 MS.gene84414:intron 75.0%
GGCGGCCAGGACGTCCGACA+GGG + chr2.4:37357481-37357500 MS.gene84414:intron 75.0%
GGCTGGGCCGTAGCCCCTGT+CGG - chr2.4:37357498-37357517 None:intergenic 75.0%
! GGGGGTGGGAACAGGCGGCC+AGG + chr2.4:37357468-37357487 MS.gene84414:intron 80.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 37357063 37358911 37357063 ID=MS.gene84414
chr2.4 mRNA 37357063 37358911 37357063 ID=MS.gene84414.t1;Parent=MS.gene84414
chr2.4 exon 37357063 37357216 37357063 ID=MS.gene84414.t1.exon1;Parent=MS.gene84414.t1
chr2.4 CDS 37357063 37357216 37357063 ID=cds.MS.gene84414.t1;Parent=MS.gene84414.t1
chr2.4 exon 37358548 37358911 37358548 ID=MS.gene84414.t1.exon2;Parent=MS.gene84414.t1
chr2.4 CDS 37358548 37358911 37358548 ID=cds.MS.gene84414.t1;Parent=MS.gene84414.t1
Gene Sequence

>MS.gene84414

GGTTTTCCTCGTTCCGATATCGACGTTCCACTAGTTCGAGCTGAACGACGTCGTCTTGCTGAGCTGCGTAATGACTACACCGACATAACTGATAAGATTAATCAAAATATACACATTTTGCATTCCTCAAGACTTGGAAATCATAAAAATTCAGGTTGGTTTACTTCTCAAACCTATGAAACACGAGACACGAAGCACATTCACGAACACACCAATAATAATTTAAGAAAATGACATAATTCAATGTAAACATCTCTGTTGTCAAAAGCGGTTGCGCCGGCCGCTATATCGGAGCGGAGCGGAAAAATCAAGACCACCGCATCAGGCTACGCGCACGTCAGAAGTGGAAAGCCGCCAAAGCGGACCTATAAATAGTAAAACAATAACTTGTACTAGTTGTATGTAGGGGGTGGGAACAGGCGGCCAGGACGTCCGACAGGGGCTACGGCCCAGCCTATTTAAAGCCTAGCTCGACCCAGCTCGTTTATTAACAAGGTCAGACTCAAGCTTTTTATAAAGCCTATTTAATTAAACAGGCCAGGCTAAGGCTTGCAAAAAAGCCTATTAAGCCCATCAGACCGGCCTATTAAGCTTTTCATATATAATATATCTTCCATTATTGATATTTTTGAAGTTTTTTTCATAAACGCAAGCATTCATATGATTGGTTATTTAGTAGCTGATATATTGGTGTGATTAGACCTTCGTAAGAATTCATTATTTAGTAGAAAACATATTTGTGTGCTTTAGGCCTTAATAAGTTTTGGCCTATTTAGGAGTAGGTTTACATATGTTGCCAGGCCTTAGCATAAAATAGGCTTTTAAATAGGCTTTCAGGCTTCATCAGGCCTTTAAAAATGCCAGGCGAAAATGAGCCTATGACGGGTAATAGGCCAGACTCAGGCCTATAATTTTTGAAGTAGGCCAGACTTAGGCCTTACAAAGCCCGGCCCGGCCTAGCCCATTTCCACCATGTAATTTGGTATAAGCCATTTTGGATTTTGCTATCCCTTTTGTTTCATATTATGAATACTTCATGAAATTTTGAGTAATACTTAAGGTATTTTAGTATTTCTTTTTGAATAGTATGGTATCTAGTATTAAATTTATTAGTGGCTGCATCACCGAAATAGCGCCCGCTACGCGCCCCACTCCTGCACCGCGCCAATTATTGGGTTGGCCGCGCCGCATTTCCGCATTGACAACAGAGGTAAACATACGTGTCAGTGTCGGGCACGGGACACACCTAATCCGAAAAGATGCCAAAATCTGATTGTGAAGTTTCTTTACTGCCTTTCAATAATATAAGTACAGCTTAACAAAAGATGATAATTCGCTGTTGCATTTTATTACTGAAGTAATCAAATTTCAGTTTTTGCATAAATATTGTTTTCTGAATGGTGAACTTCTGTATTAACTTTTAATGTTATTTAATATTAATATCATATTTGTTATGTCATGTTGAATGTTTGCTTTTCCGCTAAGACAATGATGATGGCTCAGACATGCAGACCTCATCTACTGCAGAAACTGTTGCATCAACACCATCACAGAATGTCCTTGTGAGTCTTTCCCCCAACTCGATGGATGTGGATGTCTTGGTTAGTAGACCCTTTGCAGTGGTTGACGAGATAGCAGATGCATCACCAGCGGTAGAGGATGGTTTACAGCTTGGAGATCAAATTTTGAAATTTGGCAACGTCGAAGCAGGTGAAAATTTGCTCCATAGGTTGGCTTCCGAGGCCCAGTCGAGCATGGGTCAAACAATACCTGTTGTCATCATGAGGCAAGGCACAGTGATCAACTTAACTGTTACACCTAGGACTTGGCAAGGCAGAGGTTTACTGGG
Protein sequence

>MS.gene84414.t1

GFPRSDIDVPLVRAERRRLAELRNDYTDITDKINQNIHILHSSRLGNHKNSDNDDGSDMQTSSTAETVASTPSQNVLVSLSPNSMDVDVLVSRPFAVVDEIADASPAVEDGLQLGDQILKFGNVEAGENLLHRLASEAQSSMGQTIPVVIMRQGTVINLTVTPRTWQGRGLL