Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005257.t1 | XP_003591146.1 | 100 | 423 | 0 | 0 | 1 | 423 | 1 | 423 | 7.40E-235 | 822.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005257.t1 | O23894 | 95.3 | 424 | 19 | 1 | 1 | 423 | 1 | 424 | 4.4e-228 | 791.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005257.t1 | G7I8P7 | 100.0 | 423 | 0 | 0 | 1 | 423 | 1 | 423 | 5.3e-235 | 822.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005257.t1 | MTR_1g083330 | 100.000 | 423 | 0 | 0 | 1 | 423 | 1 | 423 | 0.0 | 863 |
MS.gene005257.t1 | MTR_4g033235 | 98.815 | 422 | 5 | 0 | 2 | 423 | 3 | 424 | 0.0 | 852 |
MS.gene005257.t1 | MTR_1g069105 | 44.670 | 394 | 186 | 3 | 34 | 416 | 65 | 437 | 4.47e-113 | 339 |
MS.gene005257.t1 | MTR_7g099640 | 45.669 | 381 | 185 | 2 | 37 | 416 | 77 | 436 | 5.24e-112 | 336 |
MS.gene005257.t1 | MTR_7g099640 | 46.369 | 358 | 170 | 2 | 37 | 393 | 77 | 413 | 1.32e-107 | 324 |
MS.gene005257.t1 | MTR_4g094270 | 52.740 | 292 | 137 | 1 | 124 | 414 | 113 | 404 | 4.59e-106 | 320 |
MS.gene005257.t1 | MTR_3g062510 | 40.533 | 375 | 202 | 2 | 48 | 422 | 61 | 414 | 3.23e-102 | 310 |
MS.gene005257.t1 | MTR_3g117230 | 46.201 | 329 | 171 | 2 | 97 | 423 | 73 | 397 | 2.39e-98 | 300 |
MS.gene005257.t1 | MTR_1g095660 | 50.498 | 301 | 140 | 2 | 120 | 411 | 68 | 368 | 5.11e-98 | 298 |
MS.gene005257.t1 | MTR_3g112260 | 45.872 | 327 | 172 | 2 | 97 | 422 | 70 | 392 | 2.98e-97 | 296 |
MS.gene005257.t1 | MTR_1g069105 | 43.440 | 343 | 161 | 4 | 34 | 365 | 65 | 385 | 6.02e-91 | 280 |
MS.gene005257.t1 | MTR_8g023550 | 48.136 | 295 | 135 | 2 | 120 | 411 | 115 | 394 | 3.77e-90 | 279 |
MS.gene005257.t1 | MTR_3g062510 | 43.421 | 304 | 151 | 2 | 48 | 351 | 61 | 343 | 2.98e-88 | 273 |
MS.gene005257.t1 | MTR_3g115110 | 41.538 | 260 | 150 | 2 | 154 | 413 | 237 | 494 | 9.75e-61 | 209 |
MS.gene005257.t1 | MTR_4g094662 | 41.036 | 251 | 147 | 1 | 169 | 419 | 231 | 480 | 3.55e-60 | 207 |
MS.gene005257.t1 | MTR_2g438140 | 40.152 | 264 | 147 | 2 | 169 | 422 | 228 | 490 | 4.70e-60 | 207 |
MS.gene005257.t1 | MTR_2g438140 | 40.152 | 264 | 147 | 2 | 169 | 422 | 288 | 550 | 2.56e-59 | 205 |
MS.gene005257.t1 | MTR_1g063380 | 41.702 | 235 | 137 | 0 | 161 | 395 | 472 | 706 | 1.20e-58 | 205 |
MS.gene005257.t1 | MTR_1g063380 | 41.702 | 235 | 134 | 2 | 169 | 403 | 207 | 438 | 2.07e-57 | 202 |
MS.gene005257.t1 | MTR_7g101870 | 41.702 | 235 | 137 | 0 | 161 | 395 | 473 | 707 | 1.64e-58 | 205 |
MS.gene005257.t1 | MTR_7g101870 | 41.277 | 235 | 135 | 2 | 169 | 403 | 208 | 439 | 7.62e-57 | 200 |
MS.gene005257.t1 | MTR_2g095210 | 41.702 | 235 | 137 | 0 | 161 | 395 | 400 | 634 | 2.59e-58 | 203 |
MS.gene005257.t1 | MTR_2g095210 | 34.014 | 147 | 84 | 3 | 101 | 247 | 154 | 287 | 7.77e-20 | 92.4 |
MS.gene005257.t1 | MTR_7g010800 | 40.530 | 264 | 149 | 3 | 154 | 413 | 192 | 451 | 1.71e-57 | 200 |
MS.gene005257.t1 | MTR_2g101290 | 43.220 | 236 | 133 | 1 | 169 | 404 | 417 | 651 | 3.87e-55 | 194 |
MS.gene005257.t1 | MTR_7g089040 | 41.667 | 252 | 144 | 2 | 163 | 412 | 681 | 931 | 7.57e-55 | 196 |
MS.gene005257.t1 | MTR_7g089040 | 35.065 | 231 | 144 | 3 | 167 | 396 | 386 | 611 | 1.25e-34 | 137 |
MS.gene005257.t1 | MTR_2g095320 | 35.314 | 303 | 176 | 5 | 101 | 403 | 100 | 382 | 1.03e-54 | 193 |
MS.gene005257.t1 | MTR_2g095320 | 37.662 | 231 | 131 | 2 | 165 | 395 | 419 | 636 | 1.22e-46 | 171 |
MS.gene005257.t1 | MTR_2g101290 | 43.220 | 236 | 133 | 1 | 169 | 404 | 417 | 651 | 1.24e-54 | 194 |
MS.gene005257.t1 | MTR_7g088980 | 41.803 | 244 | 140 | 1 | 163 | 404 | 132 | 375 | 3.14e-54 | 186 |
MS.gene005257.t1 | MTR_7g088980 | 35.398 | 113 | 70 | 2 | 305 | 417 | 8 | 117 | 6.98e-12 | 67.0 |
MS.gene005257.t1 | MTR_5g069780 | 39.552 | 268 | 153 | 4 | 149 | 408 | 290 | 556 | 1.65e-53 | 191 |
MS.gene005257.t1 | MTR_7g088980 | 41.803 | 244 | 140 | 1 | 163 | 404 | 214 | 457 | 2.37e-53 | 185 |
MS.gene005257.t1 | MTR_7g088980 | 32.386 | 176 | 111 | 4 | 246 | 417 | 28 | 199 | 4.32e-17 | 83.6 |
MS.gene005257.t1 | MTR_6g016600 | 42.857 | 245 | 134 | 3 | 166 | 408 | 316 | 556 | 2.39e-53 | 187 |
MS.gene005257.t1 | MTR_4g064350 | 41.152 | 243 | 139 | 3 | 169 | 408 | 322 | 563 | 4.32e-53 | 190 |
MS.gene005257.t1 | MTR_7g088980 | 41.803 | 244 | 140 | 1 | 163 | 404 | 282 | 525 | 9.49e-53 | 185 |
MS.gene005257.t1 | MTR_7g088980 | 33.600 | 250 | 158 | 4 | 172 | 417 | 22 | 267 | 1.92e-33 | 132 |
MS.gene005257.t1 | MTR_7g088980 | 41.803 | 244 | 140 | 1 | 163 | 404 | 308 | 551 | 1.86e-52 | 185 |
MS.gene005257.t1 | MTR_7g088980 | 30.435 | 276 | 158 | 5 | 172 | 417 | 22 | 293 | 2.46e-28 | 117 |
MS.gene005257.t1 | MTR_7g088850 | 39.394 | 231 | 140 | 0 | 163 | 393 | 278 | 508 | 4.23e-52 | 183 |
MS.gene005257.t1 | MTR_7g088850 | 29.032 | 248 | 164 | 5 | 174 | 417 | 24 | 263 | 5.43e-22 | 98.6 |
MS.gene005257.t1 | MTR_7g078570 | 40.741 | 243 | 140 | 4 | 169 | 408 | 194 | 435 | 1.15e-51 | 184 |
MS.gene005257.t1 | MTR_0376s0020 | 38.776 | 245 | 147 | 2 | 169 | 411 | 3 | 246 | 1.32e-51 | 182 |
MS.gene005257.t1 | MTR_8g099605 | 38.281 | 256 | 149 | 3 | 161 | 408 | 157 | 411 | 1.87e-51 | 184 |
MS.gene005257.t1 | MTR_3g096000 | 40.613 | 261 | 148 | 4 | 154 | 408 | 283 | 542 | 2.76e-51 | 185 |
MS.gene005257.t1 | MTR_8g099605 | 38.281 | 256 | 149 | 3 | 161 | 408 | 398 | 652 | 4.43e-51 | 185 |
MS.gene005257.t1 | MTR_7g096060 | 38.889 | 252 | 146 | 4 | 162 | 408 | 235 | 483 | 5.16e-51 | 182 |
MS.gene005257.t1 | MTR_7g089290 | 38.247 | 251 | 150 | 5 | 158 | 405 | 630 | 878 | 7.32e-50 | 181 |
MS.gene005257.t1 | MTR_7g089290 | 38.247 | 251 | 150 | 5 | 158 | 405 | 658 | 906 | 7.64e-50 | 181 |
MS.gene005257.t1 | MTR_3g104470 | 42.797 | 236 | 131 | 2 | 169 | 404 | 226 | 457 | 1.86e-49 | 178 |
MS.gene005257.t1 | MTR_3g462930 | 41.152 | 243 | 137 | 4 | 166 | 404 | 303 | 543 | 2.50e-49 | 179 |
MS.gene005257.t1 | MTR_1g028390 | 43.578 | 218 | 118 | 2 | 163 | 380 | 325 | 537 | 3.77e-49 | 178 |
MS.gene005257.t1 | MTR_6g059690 | 38.525 | 244 | 144 | 4 | 169 | 408 | 199 | 440 | 4.27e-48 | 174 |
MS.gene005257.t1 | MTR_7g088830 | 37.597 | 258 | 158 | 2 | 163 | 418 | 654 | 910 | 4.98e-48 | 176 |
MS.gene005257.t1 | MTR_7g088830 | 36.486 | 222 | 115 | 7 | 206 | 411 | 432 | 643 | 2.58e-31 | 127 |
MS.gene005257.t1 | MTR_3g104480 | 42.553 | 235 | 131 | 2 | 170 | 404 | 225 | 455 | 5.56e-48 | 174 |
MS.gene005257.t1 | MTR_7g075520 | 34.915 | 295 | 165 | 7 | 130 | 421 | 184 | 454 | 1.19e-47 | 170 |
MS.gene005257.t1 | MTR_4g067100 | 38.583 | 254 | 145 | 5 | 156 | 403 | 371 | 619 | 2.08e-45 | 169 |
MS.gene005257.t1 | MTR_4g067100 | 38.583 | 254 | 145 | 5 | 156 | 403 | 371 | 619 | 2.16e-45 | 169 |
MS.gene005257.t1 | MTR_2g078630 | 37.872 | 235 | 137 | 4 | 167 | 395 | 66 | 297 | 2.74e-43 | 162 |
MS.gene005257.t1 | MTR_4g011810 | 39.344 | 244 | 131 | 6 | 161 | 394 | 236 | 472 | 4.74e-43 | 158 |
MS.gene005257.t1 | MTR_2g078630 | 37.872 | 235 | 137 | 4 | 167 | 395 | 594 | 825 | 5.12e-43 | 162 |
MS.gene005257.t1 | MTR_4g053350 | 39.130 | 230 | 128 | 8 | 161 | 386 | 121 | 342 | 6.68e-43 | 156 |
MS.gene005257.t1 | MTR_4g053350 | 39.130 | 230 | 128 | 8 | 161 | 386 | 121 | 342 | 9.73e-43 | 155 |
MS.gene005257.t1 | MTR_5g075340 | 38.039 | 255 | 151 | 3 | 169 | 420 | 231 | 481 | 2.26e-42 | 159 |
MS.gene005257.t1 | MTR_2g086160 | 37.719 | 228 | 132 | 7 | 161 | 385 | 126 | 346 | 1.01e-41 | 151 |
MS.gene005257.t1 | MTR_4g096870 | 37.037 | 243 | 140 | 7 | 165 | 402 | 117 | 351 | 1.77e-41 | 151 |
MS.gene005257.t1 | MTR_2g007010 | 38.494 | 239 | 137 | 4 | 169 | 402 | 240 | 473 | 4.28e-41 | 155 |
MS.gene005257.t1 | MTR_2g007010 | 34.348 | 230 | 146 | 2 | 165 | 392 | 526 | 752 | 4.31e-40 | 152 |
MS.gene005257.t1 | MTR_5g075360 | 36.709 | 237 | 143 | 2 | 168 | 404 | 20 | 249 | 5.42e-41 | 152 |
MS.gene005257.t1 | MTR_2g086160 | 37.555 | 229 | 133 | 7 | 161 | 386 | 126 | 347 | 1.05e-40 | 150 |
MS.gene005257.t1 | MTR_5g075360 | 36.709 | 237 | 143 | 2 | 168 | 404 | 70 | 299 | 1.51e-40 | 151 |
MS.gene005257.t1 | MTR_1g088730 | 37.991 | 229 | 133 | 5 | 169 | 393 | 934 | 1157 | 3.92e-40 | 153 |
MS.gene005257.t1 | MTR_5g075360 | 36.709 | 237 | 143 | 2 | 168 | 404 | 196 | 425 | 4.33e-40 | 152 |
MS.gene005257.t1 | MTR_5g075360 | 36.709 | 237 | 143 | 2 | 168 | 404 | 246 | 475 | 8.00e-40 | 151 |
MS.gene005257.t1 | MTR_1g099470 | 38.117 | 223 | 129 | 5 | 169 | 388 | 436 | 652 | 1.04e-39 | 151 |
MS.gene005257.t1 | MTR_3g092080 | 38.362 | 232 | 129 | 7 | 168 | 393 | 85 | 308 | 1.80e-39 | 145 |
MS.gene005257.t1 | MTR_3g092080 | 38.362 | 232 | 129 | 7 | 168 | 393 | 85 | 308 | 2.22e-39 | 145 |
MS.gene005257.t1 | MTR_3g092070 | 37.295 | 244 | 135 | 8 | 168 | 405 | 82 | 313 | 2.75e-39 | 144 |
MS.gene005257.t1 | MTR_3g092070 | 37.295 | 244 | 135 | 8 | 168 | 405 | 82 | 313 | 4.42e-39 | 144 |
MS.gene005257.t1 | MTR_5g009840 | 36.123 | 227 | 139 | 3 | 169 | 393 | 518 | 740 | 6.70e-39 | 149 |
MS.gene005257.t1 | MTR_8g099065 | 35.683 | 227 | 140 | 3 | 169 | 393 | 536 | 758 | 9.33e-39 | 149 |
MS.gene005257.t1 | MTR_1g088750 | 37.288 | 236 | 136 | 6 | 165 | 393 | 884 | 1114 | 3.03e-38 | 147 |
MS.gene005257.t1 | MTR_1g088750 | 37.288 | 236 | 136 | 6 | 165 | 393 | 933 | 1163 | 3.07e-38 | 147 |
MS.gene005257.t1 | MTR_3g104490 | 38.397 | 237 | 120 | 3 | 169 | 405 | 209 | 419 | 5.54e-38 | 146 |
MS.gene005257.t1 | MTR_3g089100 | 37.668 | 223 | 130 | 5 | 169 | 387 | 904 | 1121 | 3.42e-37 | 144 |
MS.gene005257.t1 | MTR_3g089100 | 37.668 | 223 | 130 | 5 | 169 | 387 | 899 | 1116 | 3.48e-37 | 144 |
MS.gene005257.t1 | MTR_3g089100 | 37.668 | 223 | 130 | 5 | 169 | 387 | 933 | 1150 | 3.58e-37 | 144 |
MS.gene005257.t1 | MTR_1g101870 | 37.719 | 228 | 134 | 5 | 169 | 393 | 507 | 729 | 4.22e-37 | 144 |
MS.gene005257.t1 | MTR_1g101870 | 37.719 | 228 | 134 | 5 | 169 | 393 | 559 | 781 | 4.29e-37 | 144 |
MS.gene005257.t1 | MTR_4g088885 | 41.905 | 210 | 108 | 4 | 198 | 394 | 254 | 462 | 7.09e-37 | 143 |
MS.gene005257.t1 | MTR_1g099480 | 37.555 | 229 | 133 | 6 | 169 | 393 | 470 | 692 | 2.83e-36 | 141 |
MS.gene005257.t1 | MTR_8g469460 | 37.131 | 237 | 115 | 3 | 169 | 405 | 209 | 411 | 8.64e-36 | 139 |
MS.gene005257.t1 | MTR_6g033740 | 34.802 | 227 | 141 | 4 | 169 | 393 | 502 | 723 | 9.24e-36 | 140 |
MS.gene005257.t1 | MTR_3g023900 | 37.603 | 242 | 142 | 4 | 169 | 402 | 236 | 476 | 1.19e-35 | 140 |
MS.gene005257.t1 | MTR_3g023900 | 30.488 | 246 | 150 | 3 | 165 | 392 | 529 | 771 | 6.18e-31 | 125 |
MS.gene005257.t1 | MTR_3g023890 | 32.258 | 248 | 145 | 3 | 165 | 392 | 383 | 627 | 1.49e-34 | 136 |
MS.gene005257.t1 | MTR_3g023890 | 33.600 | 250 | 146 | 7 | 169 | 406 | 94 | 335 | 1.54e-28 | 118 |
MS.gene005257.t1 | MTR_7g088980 | 33.600 | 250 | 158 | 4 | 172 | 417 | 22 | 267 | 1.03e-33 | 132 |
MS.gene005257.t1 | MTR_7g088980 | 34.836 | 244 | 114 | 2 | 163 | 404 | 282 | 482 | 3.30e-33 | 130 |
MS.gene005257.t1 | MTR_7g088980 | 34.836 | 244 | 114 | 2 | 163 | 404 | 308 | 508 | 3.94e-33 | 131 |
MS.gene005257.t1 | MTR_7g088980 | 30.435 | 276 | 158 | 5 | 172 | 417 | 22 | 293 | 1.54e-28 | 117 |
MS.gene005257.t1 | MTR_6g023875 | 33.193 | 238 | 147 | 7 | 161 | 393 | 376 | 606 | 6.38e-33 | 131 |
MS.gene005257.t1 | MTR_6g023855 | 32.946 | 258 | 158 | 7 | 163 | 410 | 242 | 494 | 9.78e-33 | 129 |
MS.gene005257.t1 | MTR_5g074850 | 35.776 | 232 | 136 | 4 | 199 | 420 | 536 | 764 | 1.10e-32 | 131 |
MS.gene005257.t1 | MTR_8g056860 | 32.911 | 237 | 145 | 4 | 179 | 406 | 481 | 712 | 1.21e-32 | 131 |
MS.gene005257.t1 | MTR_4g074920 | 33.482 | 224 | 122 | 6 | 169 | 388 | 671 | 871 | 3.56e-32 | 129 |
MS.gene005257.t1 | MTR_1g044600 | 41.143 | 175 | 100 | 3 | 237 | 408 | 197 | 371 | 6.40e-32 | 127 |
MS.gene005257.t1 | MTR_6g023865 | 31.818 | 286 | 159 | 9 | 152 | 410 | 143 | 419 | 2.26e-29 | 119 |
MS.gene005257.t1 | MTR_1g099480 | 39.766 | 171 | 94 | 5 | 169 | 335 | 470 | 635 | 4.53e-28 | 117 |
MS.gene005257.t1 | MTR_8g099065 | 36.095 | 169 | 102 | 3 | 169 | 335 | 536 | 700 | 9.56e-28 | 116 |
MS.gene005257.t1 | MTR_2g024440 | 33.624 | 229 | 133 | 7 | 169 | 387 | 216 | 435 | 1.04e-26 | 112 |
MS.gene005257.t1 | MTR_2g024440 | 33.624 | 229 | 133 | 7 | 169 | 387 | 299 | 518 | 1.60e-26 | 112 |
MS.gene005257.t1 | MTR_2g024440 | 33.624 | 229 | 133 | 7 | 169 | 387 | 298 | 517 | 1.60e-26 | 112 |
MS.gene005257.t1 | MTR_1g080430 | 32.338 | 201 | 128 | 3 | 151 | 350 | 667 | 860 | 1.85e-24 | 107 |
MS.gene005257.t1 | MTR_1g080430 | 32.338 | 201 | 128 | 3 | 151 | 350 | 667 | 860 | 1.92e-24 | 106 |
MS.gene005257.t1 | MTR_4g112600 | 51.282 | 78 | 37 | 1 | 171 | 247 | 4 | 81 | 4.97e-23 | 92.8 |
MS.gene005257.t1 | MTR_6g023845 | 28.352 | 261 | 142 | 9 | 161 | 410 | 110 | 336 | 1.95e-17 | 83.6 |
MS.gene005257.t1 | MTR_4g083460 | 32.418 | 182 | 94 | 6 | 169 | 328 | 839 | 1013 | 1.75e-15 | 79.3 |
MS.gene005257.t1 | MTR_5g020530 | 38.158 | 152 | 72 | 6 | 203 | 346 | 387 | 524 | 1.05e-14 | 76.6 |
MS.gene005257.t1 | MTR_6g005760 | 35.032 | 157 | 94 | 5 | 198 | 353 | 229 | 378 | 1.38e-14 | 75.9 |
MS.gene005257.t1 | MTR_6g005760 | 35.032 | 157 | 94 | 5 | 198 | 353 | 357 | 506 | 1.79e-14 | 75.9 |
MS.gene005257.t1 | MTR_4g077880 | 35.484 | 155 | 86 | 5 | 203 | 353 | 368 | 512 | 3.64e-14 | 74.7 |
MS.gene005257.t1 | MTR_6g042290 | 34.066 | 182 | 98 | 6 | 177 | 345 | 219 | 391 | 7.05e-14 | 73.6 |
MS.gene005257.t1 | MTR_6g009510 | 31.313 | 198 | 106 | 7 | 180 | 363 | 182 | 363 | 1.03e-13 | 73.2 |
MS.gene005257.t1 | MTR_5g020980 | 31.792 | 173 | 97 | 7 | 182 | 345 | 229 | 389 | 3.92e-13 | 71.2 |
MS.gene005257.t1 | MTR_2g076690 | 31.818 | 154 | 90 | 5 | 193 | 340 | 230 | 374 | 7.67e-13 | 70.5 |
MS.gene005257.t1 | MTR_6g009540 | 31.088 | 193 | 100 | 6 | 177 | 345 | 216 | 399 | 3.18e-12 | 68.6 |
MS.gene005257.t1 | MTR_6g009520 | 30.612 | 196 | 91 | 7 | 180 | 345 | 221 | 401 | 7.55e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene005257.t1 | AT3G05530 | 95.283 | 424 | 19 | 1 | 1 | 423 | 1 | 424 | 0.0 | 830 |
MS.gene005257.t1 | AT1G09100 | 95.272 | 423 | 20 | 0 | 1 | 423 | 1 | 423 | 0.0 | 822 |
MS.gene005257.t1 | AT4G29040 | 46.457 | 381 | 182 | 2 | 37 | 416 | 75 | 434 | 3.38e-114 | 342 |
MS.gene005257.t1 | AT2G20140 | 46.457 | 381 | 182 | 2 | 37 | 416 | 75 | 434 | 1.25e-113 | 340 |
MS.gene005257.t1 | AT5G19990 | 53.082 | 292 | 136 | 1 | 124 | 414 | 57 | 348 | 3.55e-107 | 321 |
MS.gene005257.t1 | AT5G20000 | 53.425 | 292 | 135 | 1 | 124 | 414 | 115 | 406 | 7.14e-107 | 322 |
MS.gene005257.t1 | AT5G19990 | 53.082 | 292 | 136 | 1 | 124 | 414 | 115 | 406 | 1.63e-106 | 321 |
MS.gene005257.t1 | AT5G19990 | 53.082 | 292 | 136 | 1 | 124 | 414 | 115 | 406 | 1.63e-106 | 321 |
MS.gene005257.t1 | AT1G53750 | 52.542 | 295 | 137 | 1 | 120 | 411 | 115 | 409 | 2.96e-105 | 318 |
MS.gene005257.t1 | AT5G58290 | 40.533 | 375 | 202 | 2 | 48 | 422 | 54 | 407 | 1.75e-102 | 310 |
MS.gene005257.t1 | AT1G53780 | 45.479 | 376 | 174 | 5 | 59 | 423 | 240 | 595 | 1.98e-99 | 309 |
MS.gene005257.t1 | AT1G53780 | 45.479 | 376 | 174 | 5 | 59 | 423 | 241 | 596 | 2.24e-99 | 308 |
MS.gene005257.t1 | AT1G53780 | 45.479 | 376 | 174 | 5 | 59 | 423 | 241 | 596 | 2.24e-99 | 308 |
MS.gene005257.t1 | AT1G53780 | 45.479 | 376 | 174 | 5 | 59 | 423 | 262 | 617 | 2.49e-99 | 309 |
MS.gene005257.t1 | AT1G45000 | 45.872 | 327 | 172 | 2 | 97 | 422 | 70 | 392 | 2.93e-98 | 299 |
MS.gene005257.t1 | AT5G43010 | 45.872 | 327 | 172 | 2 | 97 | 422 | 70 | 392 | 3.09e-98 | 299 |
MS.gene005257.t1 | AT1G50250 | 41.154 | 260 | 151 | 2 | 154 | 413 | 247 | 504 | 1.19e-60 | 209 |
MS.gene005257.t1 | AT5G42270 | 40.769 | 260 | 152 | 2 | 154 | 413 | 235 | 492 | 1.91e-60 | 209 |
MS.gene005257.t1 | AT1G06430 | 40.152 | 264 | 147 | 2 | 169 | 422 | 219 | 481 | 2.10e-60 | 208 |
MS.gene005257.t1 | AT1G06430 | 40.152 | 264 | 147 | 2 | 169 | 422 | 219 | 481 | 2.10e-60 | 208 |
MS.gene005257.t1 | AT1G06430 | 40.152 | 264 | 147 | 2 | 169 | 422 | 219 | 481 | 2.10e-60 | 208 |
MS.gene005257.t1 | AT2G30950 | 37.324 | 284 | 167 | 2 | 149 | 422 | 210 | 492 | 1.44e-59 | 206 |
MS.gene005257.t1 | AT2G30950 | 37.324 | 284 | 167 | 2 | 149 | 422 | 206 | 488 | 1.49e-59 | 206 |
MS.gene005257.t1 | AT2G30950 | 37.324 | 284 | 167 | 2 | 149 | 422 | 206 | 488 | 1.49e-59 | 206 |
MS.gene005257.t1 | AT2G30950 | 37.324 | 284 | 167 | 2 | 149 | 422 | 206 | 488 | 1.49e-59 | 206 |
MS.gene005257.t1 | AT3G53230 | 41.702 | 235 | 137 | 0 | 161 | 395 | 472 | 706 | 2.02e-58 | 204 |
MS.gene005257.t1 | AT3G53230 | 36.304 | 303 | 172 | 6 | 129 | 413 | 151 | 450 | 1.49e-56 | 199 |
MS.gene005257.t1 | AT3G09840 | 37.457 | 291 | 163 | 5 | 129 | 403 | 150 | 437 | 7.82e-58 | 203 |
MS.gene005257.t1 | AT3G09840 | 41.525 | 236 | 137 | 1 | 161 | 395 | 471 | 706 | 1.55e-55 | 196 |
MS.gene005257.t1 | AT1G45000 | 46.635 | 208 | 107 | 1 | 97 | 304 | 70 | 273 | 8.12e-58 | 193 |
MS.gene005257.t1 | AT5G03340 | 37.113 | 291 | 164 | 5 | 129 | 403 | 150 | 437 | 3.62e-57 | 201 |
MS.gene005257.t1 | AT5G03340 | 41.277 | 235 | 138 | 0 | 161 | 395 | 471 | 705 | 4.38e-57 | 201 |
MS.gene005257.t1 | AT5G15250 | 39.773 | 264 | 148 | 2 | 169 | 422 | 223 | 485 | 3.67e-56 | 197 |
MS.gene005257.t1 | AT3G02450 | 43.145 | 248 | 135 | 3 | 163 | 408 | 327 | 570 | 6.62e-54 | 189 |
MS.gene005257.t1 | AT2G03670 | 41.224 | 245 | 141 | 2 | 163 | 404 | 279 | 523 | 3.27e-53 | 187 |
MS.gene005257.t1 | AT2G03670 | 37.083 | 240 | 144 | 3 | 171 | 404 | 23 | 261 | 6.82e-45 | 164 |
MS.gene005257.t1 | AT5G64580 | 39.423 | 312 | 174 | 6 | 111 | 408 | 249 | 559 | 5.29e-53 | 190 |
MS.gene005257.t1 | AT5G15250 | 36.934 | 287 | 147 | 4 | 169 | 422 | 223 | 508 | 1.05e-52 | 184 |
MS.gene005257.t1 | AT3G56690 | 38.889 | 252 | 151 | 2 | 163 | 412 | 717 | 967 | 2.89e-52 | 189 |
MS.gene005257.t1 | AT3G56690 | 38.889 | 252 | 145 | 5 | 148 | 394 | 359 | 606 | 1.77e-45 | 169 |
MS.gene005257.t1 | AT3G16290 | 41.525 | 236 | 137 | 1 | 169 | 404 | 409 | 643 | 5.96e-52 | 187 |
MS.gene005257.t1 | AT3G47060 | 40.650 | 246 | 142 | 3 | 166 | 408 | 321 | 565 | 3.01e-51 | 184 |
MS.gene005257.t1 | AT1G07510 | 40.244 | 246 | 143 | 3 | 169 | 411 | 326 | 570 | 4.41e-51 | 184 |
MS.gene005257.t1 | AT5G58870 | 42.213 | 244 | 133 | 5 | 166 | 404 | 325 | 565 | 5.65e-51 | 184 |
MS.gene005257.t1 | AT5G53170 | 41.736 | 242 | 136 | 2 | 163 | 404 | 355 | 591 | 6.61e-51 | 184 |
MS.gene005257.t1 | AT2G26140 | 40.711 | 253 | 144 | 3 | 169 | 419 | 226 | 474 | 6.28e-49 | 177 |
MS.gene005257.t1 | AT4G23940 | 36.719 | 256 | 153 | 3 | 161 | 408 | 421 | 675 | 6.72e-49 | 179 |
MS.gene005257.t1 | AT2G29080 | 39.184 | 245 | 146 | 2 | 169 | 411 | 321 | 564 | 3.36e-48 | 176 |
MS.gene005257.t1 | AT1G03000 | 36.800 | 250 | 153 | 5 | 158 | 404 | 646 | 893 | 9.64e-48 | 175 |
MS.gene005257.t1 | AT2G45500 | 34.457 | 267 | 151 | 7 | 161 | 421 | 74 | 322 | 1.27e-46 | 164 |
MS.gene005257.t1 | AT2G45500 | 34.457 | 267 | 151 | 7 | 161 | 421 | 74 | 322 | 1.27e-46 | 164 |
MS.gene005257.t1 | AT2G03670 | 37.083 | 240 | 144 | 3 | 171 | 404 | 23 | 261 | 4.01e-46 | 164 |
MS.gene005257.t1 | AT2G03670 | 39.860 | 143 | 85 | 1 | 163 | 304 | 279 | 421 | 6.10e-27 | 112 |
MS.gene005257.t1 | AT2G45500 | 34.457 | 267 | 151 | 7 | 161 | 421 | 207 | 455 | 1.61e-45 | 164 |
MS.gene005257.t1 | AT2G45500 | 34.457 | 267 | 151 | 7 | 161 | 421 | 211 | 459 | 1.69e-45 | 164 |
MS.gene005257.t1 | AT2G45500 | 34.457 | 267 | 151 | 7 | 161 | 421 | 217 | 465 | 2.07e-45 | 164 |
MS.gene005257.t1 | AT1G05910 | 38.431 | 255 | 144 | 5 | 168 | 412 | 379 | 630 | 4.96e-45 | 167 |
MS.gene005257.t1 | AT3G01610 | 37.247 | 247 | 140 | 3 | 159 | 394 | 222 | 464 | 6.19e-44 | 164 |
MS.gene005257.t1 | AT3G01610 | 34.934 | 229 | 144 | 3 | 165 | 392 | 523 | 747 | 1.61e-35 | 139 |
MS.gene005257.t1 | AT3G15120 | 39.076 | 238 | 134 | 5 | 164 | 394 | 723 | 956 | 6.46e-44 | 164 |
MS.gene005257.t1 | AT3G01610 | 37.247 | 247 | 140 | 3 | 159 | 394 | 222 | 464 | 7.13e-44 | 164 |
MS.gene005257.t1 | AT3G01610 | 34.934 | 229 | 144 | 3 | 165 | 392 | 523 | 747 | 1.65e-35 | 139 |
MS.gene005257.t1 | AT3G15120 | 39.076 | 238 | 134 | 5 | 164 | 394 | 713 | 946 | 7.43e-44 | 164 |
MS.gene005257.t1 | AT1G80350 | 39.506 | 243 | 132 | 5 | 161 | 394 | 230 | 466 | 1.37e-43 | 160 |
MS.gene005257.t1 | AT5G53540 | 38.793 | 232 | 128 | 7 | 168 | 393 | 85 | 308 | 9.16e-43 | 155 |
MS.gene005257.t1 | AT4G27680 | 39.224 | 232 | 127 | 7 | 168 | 393 | 82 | 305 | 4.98e-42 | 153 |
MS.gene005257.t1 | AT1G50140 | 39.732 | 224 | 126 | 5 | 169 | 388 | 713 | 931 | 4.16e-41 | 156 |
MS.gene005257.t1 | AT1G50140 | 39.732 | 224 | 126 | 5 | 169 | 388 | 713 | 931 | 4.16e-41 | 156 |
MS.gene005257.t1 | AT1G50140 | 39.732 | 224 | 126 | 5 | 169 | 388 | 713 | 931 | 4.16e-41 | 156 |
MS.gene005257.t1 | AT1G50140 | 39.732 | 224 | 126 | 5 | 169 | 388 | 691 | 909 | 4.46e-41 | 156 |
MS.gene005257.t1 | AT1G50140 | 39.732 | 224 | 126 | 5 | 169 | 388 | 691 | 909 | 4.46e-41 | 156 |
MS.gene005257.t1 | AT5G08470 | 39.496 | 238 | 132 | 5 | 169 | 403 | 834 | 1062 | 1.06e-40 | 155 |
MS.gene005257.t1 | AT5G08470 | 39.496 | 238 | 132 | 5 | 169 | 403 | 843 | 1071 | 1.08e-40 | 155 |
MS.gene005257.t1 | AT2G27600 | 37.662 | 231 | 130 | 8 | 161 | 386 | 123 | 344 | 2.46e-40 | 149 |
MS.gene005257.t1 | AT4G02480 | 37.555 | 229 | 134 | 5 | 169 | 393 | 962 | 1185 | 2.87e-40 | 154 |
MS.gene005257.t1 | AT3G19740 | 34.926 | 272 | 153 | 6 | 169 | 423 | 703 | 967 | 1.66e-39 | 151 |
MS.gene005257.t1 | AT2G34560 | 36.364 | 231 | 143 | 3 | 165 | 394 | 98 | 325 | 2.36e-39 | 145 |
MS.gene005257.t1 | AT2G34560 | 36.364 | 231 | 143 | 3 | 165 | 394 | 107 | 334 | 2.67e-39 | 145 |
MS.gene005257.t1 | AT1G02890 | 37.555 | 229 | 134 | 5 | 169 | 393 | 943 | 1166 | 4.79e-39 | 150 |
MS.gene005257.t1 | AT4G28000 | 36.123 | 227 | 138 | 4 | 169 | 393 | 519 | 740 | 1.09e-37 | 145 |
MS.gene005257.t1 | AT4G28000 | 36.123 | 227 | 138 | 4 | 169 | 393 | 519 | 740 | 1.22e-37 | 145 |
MS.gene005257.t1 | AT4G28000 | 36.123 | 227 | 138 | 4 | 169 | 393 | 517 | 738 | 1.29e-37 | 145 |
MS.gene005257.t1 | AT4G24860 | 36.771 | 223 | 132 | 5 | 169 | 387 | 817 | 1034 | 1.47e-37 | 145 |
MS.gene005257.t1 | AT4G24860 | 36.771 | 223 | 132 | 5 | 169 | 387 | 819 | 1036 | 1.57e-37 | 145 |
MS.gene005257.t1 | AT4G24860 | 36.771 | 223 | 132 | 5 | 169 | 387 | 792 | 1009 | 1.60e-37 | 145 |
MS.gene005257.t1 | AT4G24860 | 36.771 | 223 | 132 | 5 | 169 | 387 | 815 | 1032 | 1.72e-37 | 145 |
MS.gene005257.t1 | AT1G64110 | 33.200 | 250 | 154 | 5 | 150 | 393 | 495 | 737 | 7.78e-36 | 140 |
MS.gene005257.t1 | AT1G64110 | 33.200 | 250 | 154 | 5 | 150 | 393 | 498 | 740 | 7.88e-36 | 140 |
MS.gene005257.t1 | AT1G64110 | 33.200 | 250 | 154 | 5 | 150 | 393 | 498 | 740 | 7.88e-36 | 140 |
MS.gene005257.t1 | AT1G64110 | 33.200 | 250 | 154 | 5 | 150 | 393 | 500 | 742 | 7.98e-36 | 140 |
MS.gene005257.t1 | AT1G64110 | 33.200 | 250 | 154 | 5 | 150 | 393 | 500 | 742 | 7.98e-36 | 140 |
MS.gene005257.t1 | AT3G27120 | 35.294 | 238 | 142 | 7 | 161 | 393 | 394 | 624 | 1.81e-35 | 139 |
MS.gene005257.t1 | AT4G04910 | 30.000 | 440 | 241 | 14 | 17 | 418 | 79 | 489 | 3.24e-35 | 138 |
MS.gene005257.t1 | AT5G52882 | 34.361 | 227 | 142 | 4 | 169 | 393 | 516 | 737 | 3.66e-35 | 138 |
MS.gene005257.t1 | AT1G79560 | 30.769 | 234 | 148 | 3 | 179 | 403 | 501 | 729 | 5.18e-30 | 123 |
MS.gene005257.t1 | AT1G79560 | 30.769 | 234 | 148 | 3 | 179 | 403 | 501 | 729 | 5.66e-30 | 123 |
MS.gene005257.t1 | AT1G79560 | 30.769 | 234 | 148 | 3 | 179 | 403 | 501 | 729 | 6.26e-30 | 123 |
MS.gene005257.t1 | AT1G62130 | 33.333 | 222 | 129 | 5 | 169 | 387 | 745 | 950 | 3.72e-29 | 120 |
MS.gene005257.t1 | AT1G62130 | 33.333 | 222 | 129 | 5 | 169 | 387 | 752 | 957 | 3.87e-29 | 120 |
MS.gene005257.t1 | AT4G04180 | 32.889 | 225 | 134 | 8 | 169 | 384 | 313 | 529 | 6.55e-25 | 107 |
MS.gene005257.t1 | AT4G04180 | 32.889 | 225 | 134 | 8 | 169 | 384 | 318 | 534 | 8.69e-25 | 107 |
MS.gene005257.t1 | AT3G04340 | 31.731 | 208 | 136 | 3 | 145 | 351 | 763 | 965 | 1.00e-24 | 107 |
MS.gene005257.t1 | AT1G02890 | 32.314 | 229 | 118 | 6 | 169 | 393 | 943 | 1138 | 1.17e-24 | 107 |
MS.gene005257.t1 | AT5G08470 | 38.255 | 149 | 87 | 2 | 169 | 316 | 843 | 987 | 1.66e-21 | 97.8 |
MS.gene005257.t1 | AT5G16930 | 32.258 | 217 | 116 | 8 | 144 | 353 | 349 | 541 | 1.83e-16 | 82.0 |
MS.gene005257.t1 | AT2G18330 | 33.690 | 187 | 102 | 7 | 164 | 346 | 353 | 521 | 1.02e-14 | 76.6 |
MS.gene005257.t1 | AT5G40000 | 34.239 | 184 | 96 | 8 | 177 | 345 | 214 | 387 | 1.43e-14 | 75.9 |
MS.gene005257.t1 | AT4G36580 | 28.112 | 249 | 127 | 9 | 175 | 389 | 361 | 591 | 2.77e-14 | 75.5 |
MS.gene005257.t1 | AT3G03060 | 35.625 | 160 | 89 | 5 | 198 | 353 | 380 | 529 | 4.31e-14 | 74.7 |
MS.gene005257.t1 | AT3G28600 | 31.683 | 202 | 111 | 8 | 177 | 361 | 172 | 363 | 1.10e-13 | 72.8 |
MS.gene005257.t1 | AT3G28600 | 31.683 | 202 | 111 | 8 | 177 | 361 | 211 | 402 | 1.13e-13 | 73.2 |
MS.gene005257.t1 | AT3G28610 | 32.620 | 187 | 98 | 9 | 193 | 361 | 226 | 402 | 7.24e-12 | 67.4 |
MS.gene005257.t1 | AT3G28580 | 26.255 | 259 | 153 | 6 | 138 | 370 | 174 | 420 | 1.11e-11 | 67.0 |
Find 104 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCCTCAGCCTCGTCTTC+TGG | 0.228963 | 1.4:-67401508 | None:intergenic |
CGATGGCTTCAACCAATTCT+TGG | 0.292529 | 1.4:-67402118 | None:intergenic |
GGCTTGCTTTCTTCTTTGCT+TGG | 0.296463 | 1.4:-67404507 | None:intergenic |
TCAGAAAAGTGGCATTTGTC+TGG | 0.309421 | 1.4:-67402259 | None:intergenic |
TAGCAGTGATGACCGAATTA+AGG | 0.309822 | 1.4:+67403072 | MS.gene005257:CDS |
AGGGACTGGGAAAACTTTAA+TGG | 0.317454 | 1.4:+67402220 | MS.gene005257:CDS |
CAAAGATAGTTACTTAATCT+TGG | 0.330624 | 1.4:+67401889 | MS.gene005257:CDS |
ACAATCTTTCTTCCAGTTGT+TGG | 0.343456 | 1.4:+67401818 | MS.gene005257:CDS |
AGTTCTTCAAAATTTACATC+TGG | 0.351709 | 1.4:-67403638 | None:intergenic |
GAGTTGCTCAATCAGCTTGA+TGG | 0.362416 | 1.4:+67403046 | MS.gene005257:CDS |
GATCCTGCCCTCATGCGTTC+TGG | 0.363815 | 1.4:+67403435 | MS.gene005257:CDS |
CGGTGCTCATATTCGCTAAT+TGG | 0.368891 | 1.4:-67400738 | None:intergenic |
TAGCTTAAGCATAATAGTTC+AGG | 0.374037 | 1.4:-67404528 | None:intergenic |
CTAGCTCTTGCTTCTTCAGT+TGG | 0.375196 | 1.4:-67403489 | None:intergenic |
TTGTGAGTCAAGATCAATAT+TGG | 0.376702 | 1.4:-67401536 | None:intergenic |
AACAATGTTACCAACAAGAT+AGG | 0.382812 | 1.4:-67401023 | None:intergenic |
GAACATTCATCTTCCTTGAA+TGG | 0.391870 | 1.4:-67403613 | None:intergenic |
AGAGTCGCAGAGGACGAATC+TGG | 0.398430 | 1.4:+67400934 | MS.gene005257:CDS |
TTGTCAACAGATCCAAGAAT+TGG | 0.409458 | 1.4:+67402106 | MS.gene005257:intron |
AAACAATTACCCTATCTTGT+TGG | 0.411929 | 1.4:+67401013 | MS.gene005257:CDS |
CCCAAGGGAGTGCTCTTATA+TGG | 0.412748 | 1.4:+67402191 | MS.gene005257:CDS |
TAGCTCTTGCTTCTTCAGTT+GGG | 0.414601 | 1.4:-67403488 | None:intergenic |
GAGGACGAATTCCTAACTTC+TGG | 0.415768 | 1.4:-67402169 | None:intergenic |
AATTAAGACAAACCTTAATT+CGG | 0.426125 | 1.4:-67403084 | None:intergenic |
TTGTCTGGGCTGCACAGGCA+CGG | 0.428467 | 1.4:-67402244 | None:intergenic |
AAGCGCTCTTTGTGGGTCAT+TGG | 0.433595 | 1.4:-67402146 | None:intergenic |
TTATATGGTCCACCAGGGAC+TGG | 0.443181 | 1.4:+67402206 | MS.gene005257:CDS |
ATAGATGAAATCGATGCAAT+TGG | 0.444462 | 1.4:+67402802 | MS.gene005257:CDS |
CTGTGTTGAGGCTGGCATGT+TGG | 0.447123 | 1.4:+67403706 | MS.gene005257:CDS |
CTTCTGGAAGCGCTCTTTGT+GGG | 0.456356 | 1.4:-67402153 | None:intergenic |
GTTCTTCAAAATTTACATCT+GGG | 0.460201 | 1.4:-67403637 | None:intergenic |
CCTCATGCGTTCTGGTCGAT+TGG | 0.460311 | 1.4:+67403443 | MS.gene005257:CDS |
ACCATATAAGAGCACTCCCT+TGG | 0.462776 | 1.4:-67402192 | None:intergenic |
AAAGAGCGCTTCCAGAAGTT+AGG | 0.468454 | 1.4:+67402158 | MS.gene005257:CDS |
TGAGTATGATTCTAGAGTTA+AGG | 0.468971 | 1.4:+67401925 | MS.gene005257:CDS |
GGGTCAACAAGTCCAACAAC+TGG | 0.470215 | 1.4:-67401830 | None:intergenic |
AGCAAGAGCTAGAATTCTGC+AGG | 0.476446 | 1.4:+67403500 | MS.gene005257:CDS |
CTTGCTTCTTCAGTTGGGTG+AGG | 0.478295 | 1.4:-67403483 | None:intergenic |
GAAGTTAGCAGGCCCTCAGC+TGG | 0.481435 | 1.4:+67402280 | MS.gene005257:CDS |
CTAAAACCTGGTGATCTTGT+TGG | 0.482397 | 1.4:+67401860 | MS.gene005257:CDS |
GCAGTGAAGTGAGTGGGGAC+AGG | 0.483517 | 1.4:+67403002 | MS.gene005257:intron |
ACTTCTGGAAGCGCTCTTTG+TGG | 0.494928 | 1.4:-67402154 | None:intergenic |
TATATGGTCCACCAGGGACT+GGG | 0.495384 | 1.4:+67402207 | MS.gene005257:CDS |
AAGGCTGTCTGTGTTGAGGC+TGG | 0.496605 | 1.4:+67403698 | MS.gene005257:CDS |
CAGAAAAGTGGCATTTGTCT+GGG | 0.501348 | 1.4:-67402258 | None:intergenic |
AGCAGGCCCTCAGCTGGTCC+AGG | 0.505977 | 1.4:+67402286 | MS.gene005257:CDS |
CCATATAAGAGCACTCCCTT+GGG | 0.506740 | 1.4:-67402191 | None:intergenic |
GGCATTTGTCTGGGCTGCAC+AGG | 0.513528 | 1.4:-67402249 | None:intergenic |
AACTATGTACAGATGTTCAT+AGG | 0.516004 | 1.4:+67402712 | MS.gene005257:intron |
CATTGGTGGATTAGAGAAGC+AGG | 0.519493 | 1.4:+67401988 | MS.gene005257:CDS |
GAAGACGAGGCTGAGGAAGA+TGG | 0.522320 | 1.4:+67401511 | MS.gene005257:CDS |
CGACCAGAACGCATGAGGGC+AGG | 0.522529 | 1.4:-67403438 | None:intergenic |
TGATCTTGACTCACAAAGGA+AGG | 0.522742 | 1.4:+67401543 | MS.gene005257:CDS |
CGGTCCACAGATGATTTCAA+TGG | 0.525527 | 1.4:+67403665 | MS.gene005257:CDS |
GAATCCAGAAGACGAGGCTG+AGG | 0.526999 | 1.4:+67401504 | MS.gene005257:CDS |
ATGTCATTGTAGTCCTCTGT+TGG | 0.531591 | 1.4:-67401968 | None:intergenic |
GCCTGCTAACTTCAGAAAAG+TGG | 0.540645 | 1.4:-67402270 | None:intergenic |
GGATATTTCAGATCCATTCA+AGG | 0.542702 | 1.4:+67403600 | MS.gene005257:intron |
GTGCTCTTATATGGTCCACC+AGG | 0.549568 | 1.4:+67402200 | MS.gene005257:CDS |
TGTCTGGGCTGCACAGGCAC+GGG | 0.550265 | 1.4:-67402243 | None:intergenic |
CAGTGAAGTGAGTGGGGACA+GGG | 0.551580 | 1.4:+67403003 | MS.gene005257:intron |
GCAGAGGACGAATCTGGAGT+TGG | 0.554081 | 1.4:+67400940 | MS.gene005257:CDS |
CTGATTGAGCAACTCTAACA+TGG | 0.557612 | 1.4:-67403038 | None:intergenic |
CAACGAGATTCGCATCCTCA+AGG | 0.561580 | 1.4:+67400792 | MS.gene005257:CDS |
GAGGACTACAATGACATTGG+TGG | 0.570848 | 1.4:+67401974 | MS.gene005257:CDS |
ACAATGTTACCAACAAGATA+GGG | 0.575470 | 1.4:-67401022 | None:intergenic |
GTTAGGAATTCGTCCTCCCA+AGG | 0.579890 | 1.4:+67402175 | MS.gene005257:CDS |
TTTCAATGGAGCACAACTGA+AGG | 0.583966 | 1.4:+67403679 | MS.gene005257:CDS |
TCTTGTTGGTAACATTGTTG+AGG | 0.587858 | 1.4:+67401027 | MS.gene005257:CDS |
AACCACGAGGACTTTAATGA+AGG | 0.588663 | 1.4:+67404472 | MS.gene005257:CDS |
GGTCATACCTGGACCAGCTG+AGG | 0.589442 | 1.4:-67402293 | None:intergenic |
TTGCGAGTTGGAAAGCATCA+CGG | 0.589651 | 1.4:-67402753 | None:intergenic |
TTTACACCAACAAGATCACC+AGG | 0.590492 | 1.4:-67401866 | None:intergenic |
AATCGATATGGCGAGTGCAA+TGG | 0.591062 | 1.4:+67400690 | None:intergenic |
GTACAGATGTTCATAGGAGA+CGG | 0.594735 | 1.4:+67402718 | MS.gene005257:intron |
CCAATCGACCAGAACGCATG+AGG | 0.596935 | 1.4:-67403443 | None:intergenic |
GATCTTGACTCACAAAGGAA+GGG | 0.598782 | 1.4:+67401544 | MS.gene005257:CDS |
ACTCTAGAATCATACTCAGA+AGG | 0.604623 | 1.4:-67401920 | None:intergenic |
GTCATACCTGGACCAGCTGA+GGG | 0.606521 | 1.4:-67402292 | None:intergenic |
CTAATTGCAGTGAAGTGAGT+GGG | 0.609083 | 1.4:+67402996 | MS.gene005257:intron |
TCATCTATAAATATAATGCA+TGG | 0.609735 | 1.4:-67402787 | None:intergenic |
TGATTCTAGAGTTAAGGCCA+TGG | 0.615473 | 1.4:+67401931 | MS.gene005257:CDS |
GTGGGTCATTGGCAAAACGA+TGG | 0.615718 | 1.4:-67402135 | None:intergenic |
ACTGAAGGCTGTCTGTGTTG+AGG | 0.616412 | 1.4:+67403694 | MS.gene005257:CDS |
GCTAATTGCAGTGAAGTGAG+TGG | 0.625583 | 1.4:+67402995 | MS.gene005257:intron |
AACAAACCTCAGTTGCATCA+CGG | 0.628397 | 1.4:-67403736 | None:intergenic |
TACCTTCATTAAAGTCCTCG+TGG | 0.630738 | 1.4:-67404474 | None:intergenic |
TGCTCCATTGAAATCATCTG+TGG | 0.631549 | 1.4:-67403669 | None:intergenic |
TATAAGAGCACTCCCTTGGG+AGG | 0.633736 | 1.4:-67402188 | None:intergenic |
ACAGAGGACTACAATGACAT+TGG | 0.634206 | 1.4:+67401971 | MS.gene005257:CDS |
CAATCGACCAGAACGCATGA+GGG | 0.635061 | 1.4:-67403442 | None:intergenic |
TCTACGCCGTGATGCAACTG+AGG | 0.637539 | 1.4:+67403730 | MS.gene005257:CDS |
GACCCTGACAAGCTAAAACC+TGG | 0.638981 | 1.4:+67401848 | MS.gene005257:CDS |
TTAGGAATTCGTCCTCCCAA+GGG | 0.661598 | 1.4:+67402176 | MS.gene005257:CDS |
ATATTGATCTTGACTCACAA+AGG | 0.667941 | 1.4:+67401539 | MS.gene005257:CDS |
AGAAGCTCTGACAATATCGT+CGG | 0.672009 | 1.4:-67400758 | None:intergenic |
TGAAGTGAGTGGGGACAGGG+AGG | 0.681980 | 1.4:+67403006 | MS.gene005257:CDS |
GGAAATGAATCCAGAAGACG+AGG | 0.689099 | 1.4:+67401498 | MS.gene005257:CDS |
GGTGAGGAAACTCAATCTTG+CGG | 0.696112 | 1.4:-67403467 | None:intergenic |
TGATGTAGGAAGAGTCGCAG+AGG | 0.711080 | 1.4:+67400924 | MS.gene005257:intron |
AGTTGATGAAAAGCCAACAG+AGG | 0.711108 | 1.4:+67401955 | MS.gene005257:CDS |
TAATTGCAGTGAAGTGAGTG+GGG | 0.713213 | 1.4:+67402997 | MS.gene005257:intron |
TGCTCTTATATGGTCCACCA+GGG | 0.716303 | 1.4:+67402201 | MS.gene005257:CDS |
TCAAATGTAGGTGAACCACG+AGG | 0.808374 | 1.4:+67404459 | MS.gene005257:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATATATATTTAGAAGT+TGG | + | chr1.4:67403298-67403317 | MS.gene005257:intron | 10.0% |
!! | ATGAAAAAGAAAAATAAAAT+TGG | - | chr1.4:67402884-67402903 | None:intergenic | 10.0% |
!! | TGAAAAAGAAAAATAAAATT+GGG | - | chr1.4:67402883-67402902 | None:intergenic | 10.0% |
!! | ACAATAATATATTCATAGTT+AGG | + | chr1.4:67401728-67401747 | MS.gene005257:intron | 15.0% |
!! | ATAACAAACAAATCTTAAAA+TGG | - | chr1.4:67401667-67401686 | None:intergenic | 15.0% |
!! | ATAAGAAGTAAAATATATGT+TGG | - | chr1.4:67404396-67404415 | None:intergenic | 15.0% |
!! | ATCTATATACCTATATATAA+AGG | - | chr1.4:67401407-67401426 | None:intergenic | 15.0% |
!! | ATGATTAGAAATATATATGA+TGG | - | chr1.4:67402344-67402363 | None:intergenic | 15.0% |
!! | ATTATTTGTATTATTGATGT+AGG | + | chr1.4:67400910-67400929 | MS.gene005257:intron | 15.0% |
!! | GAATATATTATTGTTAACTA+AGG | - | chr1.4:67401722-67401741 | None:intergenic | 15.0% |
!! | GGCAAATTAATTTAAAAAAT+TGG | + | chr1.4:67401243-67401262 | MS.gene005257:intron | 15.0% |
!! | TAAATGAAAACCAATAAATT+TGG | - | chr1.4:67403326-67403345 | None:intergenic | 15.0% |
!! | TCTATATACCTATATATAAA+GGG | - | chr1.4:67401406-67401425 | None:intergenic | 15.0% |
!!! | AGAATTTTACTAATTTTAGT+TGG | + | chr1.4:67403959-67403978 | MS.gene005257:intron | 15.0% |
!!! | ATCATATATATTTCTAATCA+TGG | + | chr1.4:67402343-67402362 | MS.gene005257:intron | 15.0% |
!!! | CAATCTTATAATTTTTATTG+TGG | + | chr1.4:67402973-67402992 | MS.gene005257:intron | 15.0% |
!!! | TTACCAATAACAATTAATTT+TGG | + | chr1.4:67403859-67403878 | MS.gene005257:intron | 15.0% |
!!! | TTGTTCTATTTATTTTTTTG+AGG | + | chr1.4:67403549-67403568 | MS.gene005257:intron | 15.0% |
!!! | TTTATTTTTCTTTTTCATTG+TGG | + | chr1.4:67402886-67402905 | MS.gene005257:intron | 15.0% |
!! | AAAGAAAACTATTGAGTATA+CGG | - | chr1.4:67401789-67401808 | None:intergenic | 20.0% |
!! | AATATTGTTCTTATTGTAGT+GGG | + | chr1.4:67401300-67401319 | MS.gene005257:intron | 20.0% |
!! | AATCTTAAAATGGTATGTAT+AGG | - | chr1.4:67401657-67401676 | None:intergenic | 20.0% |
!! | AATTAAGACAAACCTTAATT+CGG | - | chr1.4:67403087-67403106 | None:intergenic | 20.0% |
!! | AATTGAATAGATGTACAATT+AGG | + | chr1.4:67402422-67402441 | MS.gene005257:intron | 20.0% |
!! | AGTAAAATTCTCTTCAATTA+AGG | - | chr1.4:67403950-67403969 | None:intergenic | 20.0% |
!! | CAACCAAAATTAATTGTTAT+TGG | - | chr1.4:67403865-67403884 | None:intergenic | 20.0% |
!! | TAAATTAGTTGTTCAAAATC+TGG | - | chr1.4:67403767-67403786 | None:intergenic | 20.0% |
!! | TAAGTATTCCCTTTATATAT+AGG | + | chr1.4:67401395-67401414 | MS.gene005257:intron | 20.0% |
!! | TATAGATTTAGATAATCTTC+TGG | + | chr1.4:67401420-67401439 | MS.gene005257:intron | 20.0% |
!! | TATGTAACTTTGTATTGTTA+GGG | + | chr1.4:67400851-67400870 | MS.gene005257:intron | 20.0% |
!! | TCAATTGTATTAGAAAATCA+TGG | - | chr1.4:67402408-67402427 | None:intergenic | 20.0% |
!! | TCATCTATAAATATAATGCA+TGG | - | chr1.4:67402790-67402809 | None:intergenic | 20.0% |
!! | TCTATAATGAATGGTATAAT+TGG | + | chr1.4:67401349-67401368 | MS.gene005257:intron | 20.0% |
!! | TTATGTAACTTTGTATTGTT+AGG | + | chr1.4:67400850-67400869 | MS.gene005257:intron | 20.0% |
!!! | ACTGATTTTTCTATAATGAA+TGG | + | chr1.4:67401340-67401359 | MS.gene005257:intron | 20.0% |
!!! | ATGTTTTTATTGTGAATTTG+TGG | + | chr1.4:67402039-67402058 | MS.gene005257:intron | 20.0% |
!!! | ATTTGATTATTGTTTTCATG+TGG | + | chr1.4:67403579-67403598 | MS.gene005257:intron | 20.0% |
!!! | CAATAACAATTAATTTTGGT+TGG | + | chr1.4:67403863-67403882 | MS.gene005257:intron | 20.0% |
!!! | GCATGGTATATTTTTTATTT+AGG | + | chr1.4:67403116-67403135 | MS.gene005257:intron | 20.0% |
!!! | TGAATTTACATTTTTGCATT+GGG | + | chr1.4:67402664-67402683 | MS.gene005257:intron | 20.0% |
!!! | TTATTGGTAATTTACTTCAT+AGG | - | chr1.4:67403849-67403868 | None:intergenic | 20.0% |
!!! | TTATTGGTTTTCATTTAGTA+CGG | + | chr1.4:67403329-67403348 | MS.gene005257:intron | 20.0% |
!!! | TTGAATTTACATTTTTGCAT+TGG | + | chr1.4:67402663-67402682 | MS.gene005257:intron | 20.0% |
! | ACATATGGTTATAAACACTA+TGG | + | chr1.4:67401196-67401215 | MS.gene005257:intron | 25.0% |
! | AGAAAAATCAGTGTTACAAT+AGG | - | chr1.4:67401332-67401351 | None:intergenic | 25.0% |
! | AGCTTAATAGTTATACGTTT+AGG | + | chr1.4:67404196-67404215 | MS.gene005257:intron | 25.0% |
! | AGTTCTTCAAAATTTACATC+TGG | - | chr1.4:67403641-67403660 | None:intergenic | 25.0% |
! | ATATCTTGTAAGATGATTCA+GGG | - | chr1.4:67403794-67403813 | None:intergenic | 25.0% |
! | ATTGAAGGTCAACAAAATTA+TGG | - | chr1.4:67403228-67403247 | None:intergenic | 25.0% |
! | ATTGTATTAGAAAATCATGG+AGG | - | chr1.4:67402405-67402424 | None:intergenic | 25.0% |
! | CAAAGATAGTTACTTAATCT+TGG | + | chr1.4:67401889-67401908 | MS.gene005257:CDS | 25.0% |
! | CAAATAATTCAACCAAAATC+AGG | - | chr1.4:67400898-67400917 | None:intergenic | 25.0% |
! | CAATATTGTTCTTATTGTAG+TGG | + | chr1.4:67401299-67401318 | MS.gene005257:intron | 25.0% |
! | GAATAAAGAGAGAAGAAAAA+AGG | - | chr1.4:67400820-67400839 | None:intergenic | 25.0% |
! | GGGATATTAAAACATAAGAA+TGG | - | chr1.4:67402598-67402617 | None:intergenic | 25.0% |
! | GTTCTTCAAAATTTACATCT+GGG | - | chr1.4:67403640-67403659 | None:intergenic | 25.0% |
! | TAAGAAAAAACAGATTCAGA+TGG | - | chr1.4:67402317-67402336 | None:intergenic | 25.0% |
! | TATATCTATTTGCTCACATA+TGG | + | chr1.4:67401181-67401200 | MS.gene005257:intron | 25.0% |
! | TATATCTTGTAAGATGATTC+AGG | - | chr1.4:67403795-67403814 | None:intergenic | 25.0% |
! | TGAAACAAAAAGAGATAGAA+AGG | - | chr1.4:67404442-67404461 | None:intergenic | 25.0% |
! | TTGAAGGTCAACAAAATTAT+GGG | - | chr1.4:67403227-67403246 | None:intergenic | 25.0% |
! | TTGACAAGTGTAAATGAAAA+TGG | - | chr1.4:67403376-67403395 | None:intergenic | 25.0% |
! | TTGACACAAACAATGAAAAA+TGG | - | chr1.4:67402378-67402397 | None:intergenic | 25.0% |
!! | ATACCACAATCGAATAATTT+TGG | + | chr1.4:67401222-67401241 | MS.gene005257:intron | 25.0% |
!! | GTTCTTAAATGCTGTATTTT+AGG | + | chr1.4:67403198-67403217 | MS.gene005257:intron | 25.0% |
!! | TCTTAATTTTCTTATCTGCA+TGG | + | chr1.4:67403099-67403118 | MS.gene005257:intron | 25.0% |
!!! | AAAACAAAACTAGCTTGTTA+GGG | - | chr1.4:67403911-67403930 | None:intergenic | 25.0% |
!!! | ATGGATTTTAATGGTTTTTC+TGG | + | chr1.4:67401454-67401473 | MS.gene005257:intron | 25.0% |
!!! | GCACTGATTTAAAACAAAAA+TGG | - | chr1.4:67404357-67404376 | None:intergenic | 25.0% |
!!! | TAAAAAAGTTGGTAGATTGA+AGG | - | chr1.4:67403243-67403262 | None:intergenic | 25.0% |
!!! | TAAATTTTGAAGAACTAGCT+CGG | + | chr1.4:67403645-67403664 | MS.gene005257:CDS | 25.0% |
!!! | TCTCTTTTTGTTTCAAATGT+AGG | + | chr1.4:67404447-67404466 | MS.gene005257:intron | 25.0% |
!!! | TGGATTTTAATGGTTTTTCT+GGG | + | chr1.4:67401455-67401474 | MS.gene005257:intron | 25.0% |
!!! | TTGCTGATAATGGATTTTAA+TGG | + | chr1.4:67401445-67401464 | MS.gene005257:intron | 25.0% |
AAAATCTTTGTACAATCAGC+AGG | - | chr1.4:67402517-67402536 | None:intergenic | 30.0% | |
AAACAATTACCCTATCTTGT+TGG | + | chr1.4:67401013-67401032 | MS.gene005257:CDS | 30.0% | |
AAATCTTTGTACAATCAGCA+GGG | - | chr1.4:67402516-67402535 | None:intergenic | 30.0% | |
AACAATGTTACCAACAAGAT+AGG | - | chr1.4:67401026-67401045 | None:intergenic | 30.0% | |
AACTATGTACAGATGTTCAT+AGG | + | chr1.4:67402712-67402731 | MS.gene005257:intron | 30.0% | |
AATGAAGGAAGGAAAAATAG+AGG | - | chr1.4:67402624-67402643 | None:intergenic | 30.0% | |
ACAAGTGTAAATGAAAATGG+AGG | - | chr1.4:67403373-67403392 | None:intergenic | 30.0% | |
ACAATGTTACCAACAAGATA+GGG | - | chr1.4:67401025-67401044 | None:intergenic | 30.0% | |
ACTGAAGATAACAGAAAATC+AGG | - | chr1.4:67402448-67402467 | None:intergenic | 30.0% | |
ATAGATGAAATCGATGCAAT+TGG | + | chr1.4:67402802-67402821 | MS.gene005257:CDS | 30.0% | |
ATATAATTAATCGCCCTTCA+AGG | - | chr1.4:67403286-67403305 | None:intergenic | 30.0% | |
ATATTGATCTTGACTCACAA+AGG | + | chr1.4:67401539-67401558 | MS.gene005257:CDS | 30.0% | |
ATGAAGGAAGGAAAAATAGA+GGG | - | chr1.4:67402623-67402642 | None:intergenic | 30.0% | |
CAAAAATGGCAAAATCATCA+TGG | - | chr1.4:67404343-67404362 | None:intergenic | 30.0% | |
CAAGTGTAAATGAAAATGGA+GGG | - | chr1.4:67403372-67403391 | None:intergenic | 30.0% | |
GAAGTTGGAACCAAATTTAT+TGG | + | chr1.4:67403313-67403332 | MS.gene005257:intron | 30.0% | |
GCTATGCATGATTTAGATAT+TGG | + | chr1.4:67401477-67401496 | MS.gene005257:intron | 30.0% | |
TACGTATCATAGATGAATAC+TGG | + | chr1.4:67403148-67403167 | MS.gene005257:intron | 30.0% | |
TCAATTTATACAGACAACGA+AGG | - | chr1.4:67402647-67402666 | None:intergenic | 30.0% | |
TTGCCAAAATTATTCGATTG+TGG | - | chr1.4:67401228-67401247 | None:intergenic | 30.0% | |
TTGTGAGTCAAGATCAATAT+TGG | - | chr1.4:67401539-67401558 | None:intergenic | 30.0% | |
! | CTTCAATCTAAAACCTTGAA+GGG | + | chr1.4:67403270-67403289 | MS.gene005257:intron | 30.0% |
! | GAAGGTAGTCTTAAAAAAGT+TGG | - | chr1.4:67403254-67403273 | None:intergenic | 30.0% |
! | TTTTATTGCGTTCCTGATTT+TGG | + | chr1.4:67400883-67400902 | MS.gene005257:intron | 30.0% |
!! | AAACAAAACTAGCTTGTTAG+GGG | - | chr1.4:67403910-67403929 | None:intergenic | 30.0% |
!! | ATTTTCAACACAAACTTGCT+TGG | + | chr1.4:67402562-67402581 | MS.gene005257:intron | 30.0% |
!! | GAAAACAAAACTAGCTTGTT+AGG | - | chr1.4:67403912-67403931 | None:intergenic | 30.0% |
!! | TAGTGTTGTATGCTGATTTA+GGG | + | chr1.4:67401117-67401136 | MS.gene005257:intron | 30.0% |
!! | TGAGTATGATTCTAGAGTTA+AGG | + | chr1.4:67401925-67401944 | MS.gene005257:CDS | 30.0% |
!!! | ATGCTGATTTAGGGTTTTAT+TGG | + | chr1.4:67401126-67401145 | MS.gene005257:intron | 30.0% |
!!! | TGCTGATTTAGGGTTTTATT+GGG | + | chr1.4:67401127-67401146 | MS.gene005257:intron | 30.0% |
!!! | TTTTTCCCCTTCTGTTTTTA+GGG | + | chr1.4:67401695-67401714 | MS.gene005257:intron | 30.0% |
!!! | TTTTTTCCCCTTCTGTTTTT+AGG | + | chr1.4:67401694-67401713 | MS.gene005257:intron | 30.0% |
AACAAAGCAGATGAAGTATG+AGG | - | chr1.4:67403534-67403553 | None:intergenic | 35.0% | |
AAGGTCAACAAAATTATGGG+AGG | - | chr1.4:67403224-67403243 | None:intergenic | 35.0% | |
AATCTTTGTACAATCAGCAG+GGG | - | chr1.4:67402515-67402534 | None:intergenic | 35.0% | |
ACAATCTTTCTTCCAGTTGT+TGG | + | chr1.4:67401818-67401837 | MS.gene005257:CDS | 35.0% | |
AGAAGAAAAAAGGAACCTTG+AGG | - | chr1.4:67400810-67400829 | None:intergenic | 35.0% | |
CATTTACACTTGTCAATTGC+AGG | + | chr1.4:67403380-67403399 | MS.gene005257:intron | 35.0% | |
CTTATATGACCTGTTGATGT+GGG | + | chr1.4:67404411-67404430 | MS.gene005257:intron | 35.0% | |
GAACATCTGTACATAGTTTC+AGG | - | chr1.4:67402710-67402729 | None:intergenic | 35.0% | |
GAACATTCATCTTCCTTGAA+TGG | - | chr1.4:67403616-67403635 | None:intergenic | 35.0% | |
GGATATTTCAGATCCATTCA+AGG | + | chr1.4:67403600-67403619 | MS.gene005257:intron | 35.0% | |
TAATCGCTTGAACTACCAAT+GGG | - | chr1.4:67404169-67404188 | None:intergenic | 35.0% | |
TCATCATGGCAACTATAGAA+AGG | - | chr1.4:67404329-67404348 | None:intergenic | 35.0% | |
TCTTATATGACCTGTTGATG+TGG | + | chr1.4:67404410-67404429 | MS.gene005257:intron | 35.0% | |
TTAATCGCTTGAACTACCAA+TGG | - | chr1.4:67404170-67404189 | None:intergenic | 35.0% | |
TTGTCAACAGATCCAAGAAT+TGG | + | chr1.4:67402106-67402125 | MS.gene005257:intron | 35.0% | |
! | CCTTCAATCTAAAACCTTGA+AGG | + | chr1.4:67403269-67403288 | MS.gene005257:intron | 35.0% |
!! | ACTCTAGAATCATACTCAGA+AGG | - | chr1.4:67401923-67401942 | None:intergenic | 35.0% |
!! | CATAGATGAATACTGGCTTT+GGG | + | chr1.4:67403155-67403174 | MS.gene005257:intron | 35.0% |
!! | CTAGTGTTGTATGCTGATTT+AGG | + | chr1.4:67401116-67401135 | MS.gene005257:intron | 35.0% |
!! | GGTATGAAATTTTAGCATGC+AGG | + | chr1.4:67402842-67402861 | MS.gene005257:intron | 35.0% |
!! | TCATAGATGAATACTGGCTT+TGG | + | chr1.4:67403154-67403173 | MS.gene005257:intron | 35.0% |
!! | TCTTCTGGATTTGCTGATAA+TGG | + | chr1.4:67401435-67401454 | MS.gene005257:intron | 35.0% |
!! | TCTTGTTGGTAACATTGTTG+AGG | + | chr1.4:67401027-67401046 | MS.gene005257:CDS | 35.0% |
!! | TTGGTACAAAGCGTTTTGAT+AGG | + | chr1.4:67402821-67402840 | MS.gene005257:CDS | 35.0% |
!! | TTTTGGTTGGACATTTGTCT+TGG | + | chr1.4:67403876-67403895 | MS.gene005257:intron | 35.0% |
!!! | CCTTCAAGGTTTTAGATTGA+AGG | - | chr1.4:67403272-67403291 | None:intergenic | 35.0% |
!!! | TTTTCCCCTTCTGTTTTTAG+GGG | + | chr1.4:67401696-67401715 | MS.gene005257:intron | 35.0% |
AACAAACCTCAGTTGCATCA+CGG | - | chr1.4:67403739-67403758 | None:intergenic | 40.0% | |
AACCACGAGGACTTTAATGA+AGG | + | chr1.4:67404472-67404491 | MS.gene005257:CDS | 40.0% | |
AAGGAAATTCCCACATCAAC+AGG | - | chr1.4:67404423-67404442 | None:intergenic | 40.0% | |
ACAGAGGACTACAATGACAT+TGG | + | chr1.4:67401971-67401990 | MS.gene005257:CDS | 40.0% | |
ACCATTCATAACGTTTCGAG+TGG | + | chr1.4:67401610-67401629 | MS.gene005257:intron | 40.0% | |
AGGAAGGAAAAATAGAGGGA+TGG | - | chr1.4:67402619-67402638 | None:intergenic | 40.0% | |
AGGGACTGGGAAAACTTTAA+TGG | + | chr1.4:67402220-67402239 | MS.gene005257:CDS | 40.0% | |
ATCTTTGTACAATCAGCAGG+GGG | - | chr1.4:67402514-67402533 | None:intergenic | 40.0% | |
ATGTCATTGTAGTCCTCTGT+TGG | - | chr1.4:67401971-67401990 | None:intergenic | 40.0% | |
CAGAAAAGTGGCATTTGTCT+GGG | - | chr1.4:67402261-67402280 | None:intergenic | 40.0% | |
CTAAAACCTGGTGATCTTGT+TGG | + | chr1.4:67401860-67401879 | MS.gene005257:CDS | 40.0% | |
CTAATTGCAGTGAAGTGAGT+GGG | + | chr1.4:67402996-67403015 | MS.gene005257:intron | 40.0% | |
CTGATTGAGCAACTCTAACA+TGG | - | chr1.4:67403041-67403060 | None:intergenic | 40.0% | |
CTTCATCATAATCCGAGCAT+AGG | + | chr1.4:67404134-67404153 | MS.gene005257:intron | 40.0% | |
GATCCATCCAGTTATATCAC+TGG | - | chr1.4:67402065-67402084 | None:intergenic | 40.0% | |
GATCTTGACTCACAAAGGAA+GGG | + | chr1.4:67401544-67401563 | MS.gene005257:CDS | 40.0% | |
GCTAAAAACATCTACTCGAC+AGG | + | chr1.4:67401579-67401598 | MS.gene005257:CDS | 40.0% | |
GGAAGGAAAAATAGAGGGAT+GGG | - | chr1.4:67402618-67402637 | None:intergenic | 40.0% | |
GTACAGATGTTCATAGGAGA+CGG | + | chr1.4:67402718-67402737 | MS.gene005257:intron | 40.0% | |
TAAGGCCCCTAAAAACAGAA+GGG | - | chr1.4:67401704-67401723 | None:intergenic | 40.0% | |
TAATTGCAGTGAAGTGAGTG+GGG | + | chr1.4:67402997-67403016 | MS.gene005257:intron | 40.0% | |
TACAGACAACGAAGGAATGA+AGG | - | chr1.4:67402639-67402658 | None:intergenic | 40.0% | |
TACCTTCATTAAAGTCCTCG+TGG | - | chr1.4:67404477-67404496 | None:intergenic | 40.0% | |
TAGCAGTGATGACCGAATTA+AGG | + | chr1.4:67403072-67403091 | MS.gene005257:CDS | 40.0% | |
TAGCTCTTGCTTCTTCAGTT+GGG | - | chr1.4:67403491-67403510 | None:intergenic | 40.0% | |
TCAGAAAAGTGGCATTTGTC+TGG | - | chr1.4:67402262-67402281 | None:intergenic | 40.0% | |
TCCACTCGAAACGTTATGAA+TGG | - | chr1.4:67401614-67401633 | None:intergenic | 40.0% | |
TGATCTTGACTCACAAAGGA+AGG | + | chr1.4:67401543-67401562 | MS.gene005257:CDS | 40.0% | |
TGCTCCATTGAAATCATCTG+TGG | - | chr1.4:67403672-67403691 | None:intergenic | 40.0% | |
TTTACACCAACAAGATCACC+AGG | - | chr1.4:67401869-67401888 | None:intergenic | 40.0% | |
TTTCAATGGAGCACAACTGA+AGG | + | chr1.4:67403679-67403698 | MS.gene005257:CDS | 40.0% | |
TTTGTGGCCAGTGATATAAC+TGG | + | chr1.4:67402055-67402074 | MS.gene005257:intron | 40.0% | |
! | AGAAGCTCTGACAATATCGT+CGG | - | chr1.4:67400761-67400780 | None:intergenic | 40.0% |
! | ATTAAAGTTTTCCCAGTCCC+TGG | - | chr1.4:67402221-67402240 | None:intergenic | 40.0% |
! | GTGACTTTTCTTTTGCGAGT+TGG | - | chr1.4:67402768-67402787 | None:intergenic | 40.0% |
! | TGGCTTTTCATCAACTTCCA+TGG | - | chr1.4:67401951-67401970 | None:intergenic | 40.0% |
!! | AGTTGATGAAAAGCCAACAG+AGG | + | chr1.4:67401955-67401974 | MS.gene005257:CDS | 40.0% |
!! | TGATTCTAGAGTTAAGGCCA+TGG | + | chr1.4:67401931-67401950 | MS.gene005257:CDS | 40.0% |
AAGGCCCCTAAAAACAGAAG+GGG | - | chr1.4:67401703-67401722 | None:intergenic | 45.0% | |
ACACACACACACACACACAA+TGG | + | chr1.4:67404104-67404123 | MS.gene005257:intron | 45.0% | |
AGCAAGAGCTAGAATTCTGC+AGG | + | chr1.4:67403500-67403519 | MS.gene005257:CDS | 45.0% | |
CAGATTCAGATGGTCATACC+TGG | - | chr1.4:67402307-67402326 | None:intergenic | 45.0% | |
CGATGGCTTCAACCAATTCT+TGG | - | chr1.4:67402121-67402140 | None:intergenic | 45.0% | |
CGGTCCACAGATGATTTCAA+TGG | + | chr1.4:67403665-67403684 | MS.gene005257:CDS | 45.0% | |
CGGTGCTCATATTCGCTAAT+TGG | - | chr1.4:67400741-67400760 | None:intergenic | 45.0% | |
CTAAGGCCCCTAAAAACAGA+AGG | - | chr1.4:67401705-67401724 | None:intergenic | 45.0% | |
GACAACGAAGGAATGAAGGA+AGG | - | chr1.4:67402635-67402654 | None:intergenic | 45.0% | |
GAGCTAGAATTCTGCAGGTT+TGG | + | chr1.4:67403505-67403524 | MS.gene005257:intron | 45.0% | |
GAGGACGAATTCCTAACTTC+TGG | - | chr1.4:67402172-67402191 | None:intergenic | 45.0% | |
GAGGACTACAATGACATTGG+TGG | + | chr1.4:67401974-67401993 | MS.gene005257:CDS | 45.0% | |
GAGTTGCTCAATCAGCTTGA+TGG | + | chr1.4:67403046-67403065 | MS.gene005257:CDS | 45.0% | |
GCCTGCTAACTTCAGAAAAG+TGG | - | chr1.4:67402273-67402292 | None:intergenic | 45.0% | |
GCTAATTGCAGTGAAGTGAG+TGG | + | chr1.4:67402995-67403014 | MS.gene005257:intron | 45.0% | |
GGAAATGAATCCAGAAGACG+AGG | + | chr1.4:67401498-67401517 | MS.gene005257:CDS | 45.0% | |
GGTGAGGAAACTCAATCTTG+CGG | - | chr1.4:67403470-67403489 | None:intergenic | 45.0% | |
TCAAATGTAGGTGAACCACG+AGG | + | chr1.4:67404459-67404478 | MS.gene005257:intron | 45.0% | |
TGCTCTTATATGGTCCACCA+GGG | + | chr1.4:67402201-67402220 | MS.gene005257:CDS | 45.0% | |
TGGCCAGTGATATAACTGGA+TGG | + | chr1.4:67402059-67402078 | MS.gene005257:intron | 45.0% | |
TTAGGAATTCGTCCTCCCAA+GGG | + | chr1.4:67402176-67402195 | MS.gene005257:CDS | 45.0% | |
! | CTAGCTCTTGCTTCTTCAGT+TGG | - | chr1.4:67403492-67403511 | None:intergenic | 45.0% |
! | GGCTTGCTTTCTTCTTTGCT+TGG | - | chr1.4:67404510-67404529 | None:intergenic | 45.0% |
!! | AAAGAGCGCTTCCAGAAGTT+AGG | + | chr1.4:67402158-67402177 | MS.gene005257:CDS | 45.0% |
!! | ACCATATAAGAGCACTCCCT+TGG | - | chr1.4:67402195-67402214 | None:intergenic | 45.0% |
!! | CATTGGTGGATTAGAGAAGC+AGG | + | chr1.4:67401988-67402007 | MS.gene005257:CDS | 45.0% |
!! | CCATATAAGAGCACTCCCTT+GGG | - | chr1.4:67402194-67402213 | None:intergenic | 45.0% |
!! | TTGCGAGTTGGAAAGCATCA+CGG | - | chr1.4:67402756-67402775 | None:intergenic | 45.0% |
!!! | CACCAGGTTTTAGCTTGTCA+GGG | - | chr1.4:67401853-67401872 | None:intergenic | 45.0% |
!!! | CATAGGTTTTAGCTGCCCAT+TGG | + | chr1.4:67404151-67404170 | MS.gene005257:intron | 45.0% |
!!! | GCCACTTTTCTGAAGTTAGC+AGG | + | chr1.4:67402269-67402288 | MS.gene005257:CDS | 45.0% |
!!! | TCACCAGGTTTTAGCTTGTC+AGG | - | chr1.4:67401854-67401873 | None:intergenic | 45.0% |
AAGCGCTCTTTGTGGGTCAT+TGG | - | chr1.4:67402149-67402168 | None:intergenic | 50.0% | |
ACTGAAGGCTGTCTGTGTTG+AGG | + | chr1.4:67403694-67403713 | MS.gene005257:CDS | 50.0% | |
CAACGAGATTCGCATCCTCA+AGG | + | chr1.4:67400792-67400811 | MS.gene005257:CDS | 50.0% | |
CAATCGACCAGAACGCATGA+GGG | - | chr1.4:67403445-67403464 | None:intergenic | 50.0% | |
CACACACACACAATGGAGCA+TGG | + | chr1.4:67404111-67404130 | MS.gene005257:intron | 50.0% | |
CTTGCTTCTTCAGTTGGGTG+AGG | - | chr1.4:67403486-67403505 | None:intergenic | 50.0% | |
GACCCTGACAAGCTAAAACC+TGG | + | chr1.4:67401848-67401867 | MS.gene005257:CDS | 50.0% | |
GGGCAGCTAAAACCTATGCT+CGG | - | chr1.4:67404149-67404168 | None:intergenic | 50.0% | |
GGGTCAACAAGTCCAACAAC+TGG | - | chr1.4:67401833-67401852 | None:intergenic | 50.0% | |
GTGCTCTTATATGGTCCACC+AGG | + | chr1.4:67402200-67402219 | MS.gene005257:CDS | 50.0% | |
GTGGGTCATTGGCAAAACGA+TGG | - | chr1.4:67402138-67402157 | None:intergenic | 50.0% | |
GTTAGGAATTCGTCCTCCCA+AGG | + | chr1.4:67402175-67402194 | MS.gene005257:CDS | 50.0% | |
TATATGGTCCACCAGGGACT+GGG | + | chr1.4:67402207-67402226 | MS.gene005257:CDS | 50.0% | |
TGATGTAGGAAGAGTCGCAG+AGG | + | chr1.4:67400924-67400943 | MS.gene005257:intron | 50.0% | |
TTATATGGTCCACCAGGGAC+TGG | + | chr1.4:67402206-67402225 | MS.gene005257:CDS | 50.0% | |
! | AAAGTTTTCCCAGTCCCTGG+TGG | - | chr1.4:67402218-67402237 | None:intergenic | 50.0% |
!! | ACTTCTGGAAGCGCTCTTTG+TGG | - | chr1.4:67402157-67402176 | None:intergenic | 50.0% |
!! | CCCAAGGGAGTGCTCTTATA+TGG | + | chr1.4:67402191-67402210 | MS.gene005257:CDS | 50.0% |
!! | CTTCTGGAAGCGCTCTTTGT+GGG | - | chr1.4:67402156-67402175 | None:intergenic | 50.0% |
!! | TATAAGAGCACTCCCTTGGG+AGG | - | chr1.4:67402191-67402210 | None:intergenic | 50.0% |
AAGGCTGTCTGTGTTGAGGC+TGG | + | chr1.4:67403698-67403717 | MS.gene005257:CDS | 55.0% | |
AGAGTCGCAGAGGACGAATC+TGG | + | chr1.4:67400934-67400953 | MS.gene005257:CDS | 55.0% | |
CAGTGAAGTGAGTGGGGACA+GGG | + | chr1.4:67403003-67403022 | MS.gene005257:intron | 55.0% | |
CCAATCGACCAGAACGCATG+AGG | - | chr1.4:67403446-67403465 | None:intergenic | 55.0% | |
CCTCATGCGTTCTGGTCGAT+TGG | + | chr1.4:67403443-67403462 | MS.gene005257:CDS | 55.0% | |
CTGTGTTGAGGCTGGCATGT+TGG | + | chr1.4:67403706-67403725 | MS.gene005257:CDS | 55.0% | |
GAAGACGAGGCTGAGGAAGA+TGG | + | chr1.4:67401511-67401530 | MS.gene005257:CDS | 55.0% | |
GAATCCAGAAGACGAGGCTG+AGG | + | chr1.4:67401504-67401523 | MS.gene005257:CDS | 55.0% | |
GTCATACCTGGACCAGCTGA+GGG | - | chr1.4:67402295-67402314 | None:intergenic | 55.0% | |
TCTACGCCGTGATGCAACTG+AGG | + | chr1.4:67403730-67403749 | MS.gene005257:CDS | 55.0% | |
TCTTCCTCAGCCTCGTCTTC+TGG | - | chr1.4:67401511-67401530 | None:intergenic | 55.0% | |
! | GCAGAGGACGAATCTGGAGT+TGG | + | chr1.4:67400940-67400959 | MS.gene005257:CDS | 55.0% |
GAAGTTAGCAGGCCCTCAGC+TGG | + | chr1.4:67402280-67402299 | MS.gene005257:CDS | 60.0% | |
GATCCTGCCCTCATGCGTTC+TGG | + | chr1.4:67403435-67403454 | MS.gene005257:CDS | 60.0% | |
GCAGTGAAGTGAGTGGGGAC+AGG | + | chr1.4:67403002-67403021 | MS.gene005257:intron | 60.0% | |
GGCATTTGTCTGGGCTGCAC+AGG | - | chr1.4:67402252-67402271 | None:intergenic | 60.0% | |
GGTCATACCTGGACCAGCTG+AGG | - | chr1.4:67402296-67402315 | None:intergenic | 60.0% | |
TGAAGTGAGTGGGGACAGGG+AGG | + | chr1.4:67403006-67403025 | MS.gene005257:CDS | 60.0% | |
TTGTCTGGGCTGCACAGGCA+CGG | - | chr1.4:67402247-67402266 | None:intergenic | 60.0% | |
CGACCAGAACGCATGAGGGC+AGG | - | chr1.4:67403441-67403460 | None:intergenic | 65.0% | |
TGTCTGGGCTGCACAGGCAC+GGG | - | chr1.4:67402246-67402265 | None:intergenic | 65.0% | |
AGCAGGCCCTCAGCTGGTCC+AGG | + | chr1.4:67402286-67402305 | MS.gene005257:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 67400697 | 67404546 | 67400697 | ID=MS.gene005257 |
chr1.4 | mRNA | 67400697 | 67404546 | 67400697 | ID=MS.gene005257.t1;Parent=MS.gene005257 |
chr1.4 | exon | 67400697 | 67400813 | 67400697 | ID=MS.gene005257.t1.exon1;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67400697 | 67400813 | 67400697 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67400932 | 67401048 | 67400932 | ID=MS.gene005257.t1.exon2;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67400932 | 67401048 | 67400932 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67401493 | 67401600 | 67401493 | ID=MS.gene005257.t1.exon3;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67401493 | 67401600 | 67401493 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67401818 | 67402009 | 67401818 | ID=MS.gene005257.t1.exon4;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67401818 | 67402009 | 67401818 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67402116 | 67402307 | 67402116 | ID=MS.gene005257.t1.exon5;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67402116 | 67402307 | 67402116 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67402724 | 67402842 | 67402724 | ID=MS.gene005257.t1.exon6;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67402724 | 67402842 | 67402724 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67403006 | 67403093 | 67403006 | ID=MS.gene005257.t1.exon7;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67403006 | 67403093 | 67403006 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67403402 | 67403521 | 67403402 | ID=MS.gene005257.t1.exon8;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67403402 | 67403521 | 67403402 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67403611 | 67403751 | 67403611 | ID=MS.gene005257.t1.exon9;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67403611 | 67403751 | 67403611 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
chr1.4 | exon | 67404469 | 67404546 | 67404469 | ID=MS.gene005257.t1.exon10;Parent=MS.gene005257.t1 |
chr1.4 | CDS | 67404469 | 67404546 | 67404469 | ID=cds.MS.gene005257.t1;Parent=MS.gene005257.t1 |
Gene Sequence |
Protein sequence |