Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84630.t1 | XP_024626174.1 | 92.2 | 243 | 15 | 1 | 1 | 243 | 1 | 239 | 5.30E-108 | 400.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84630.t1 | O09053 | 34.9 | 152 | 96 | 2 | 89 | 239 | 72 | 221 | 1.9e-18 | 94.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84630.t1 | A0A396GZB8 | 91.9 | 221 | 14 | 1 | 1 | 221 | 1 | 217 | 7.4e-96 | 359.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055063 | MS.gene84630 | 0.812782 | 3.57E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84630.t1 | AT4G13870 | 31.915 | 188 | 118 | 5 | 59 | 239 | 94 | 278 | 1.22e-26 | 104 |
MS.gene84630.t1 | AT4G13870 | 31.915 | 188 | 118 | 5 | 59 | 239 | 94 | 278 | 1.93e-26 | 104 |
MS.gene84630.t1 | AT2G36110 | 32.474 | 194 | 117 | 6 | 48 | 236 | 14 | 198 | 2.90e-22 | 92.0 |
MS.gene84630.t1 | AT3G12410 | 28.774 | 212 | 128 | 7 | 46 | 236 | 13 | 222 | 2.68e-21 | 89.4 |
MS.gene84630.t1 | AT3G12460 | 26.457 | 223 | 127 | 8 | 47 | 236 | 13 | 231 | 3.78e-20 | 86.7 |
MS.gene84630.t1 | AT3G12430 | 25.352 | 213 | 124 | 7 | 55 | 236 | 22 | 230 | 2.95e-17 | 78.6 |
MS.gene84630.t1 | AT3G12470 | 29.744 | 195 | 129 | 6 | 47 | 236 | 13 | 204 | 4.98e-17 | 77.8 |
MS.gene84630.t1 | AT3G12440 | 31.034 | 174 | 111 | 6 | 71 | 238 | 177 | 347 | 9.52e-16 | 75.9 |
MS.gene84630.t1 | AT3G12420 | 27.429 | 175 | 86 | 6 | 47 | 182 | 13 | 185 | 1.64e-11 | 61.6 |
Find 90 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATTGGCCGCGTTTGAAAT+TGG | 0.191758 | 7.3:-38628302 | None:intergenic |
GGGGTGTAGGGTTTGGAGTG+GGG | 0.282528 | 7.3:-38628054 | None:intergenic |
TTGGTGTTGGTGTTGGTGGT+GGG | 0.291309 | 7.3:-38628075 | None:intergenic |
GTTGGTGTTGGTGTTGGTGG+TGG | 0.308418 | 7.3:-38628076 | None:intergenic |
GGTGTTGGTGTTGGTGGTGG+GGG | 0.332366 | 7.3:-38628073 | None:intergenic |
CATCAGCAAGGAAGTTTAAG+AGG | 0.346441 | 7.3:-38628408 | None:intergenic |
AGAAGATTTCGATGAGTAGA+TGG | 0.348163 | 7.3:+38628623 | MS.gene84630:CDS |
GATTGGCCGCGTTTGAAATT+GGG | 0.355658 | 7.3:-38628301 | None:intergenic |
GGCCGACGAGGACGGGGAAT+GGG | 0.358360 | 7.3:-38628261 | None:intergenic |
GGGTGTAGGGTTTGGAGTGG+GGG | 0.364029 | 7.3:-38628053 | None:intergenic |
GTTTGTGTTGGTGTTGGTGT+TGG | 0.381841 | 7.3:-38628082 | None:intergenic |
GGTGGAGGCGGAGGGTTTCG+AGG | 0.382099 | 7.3:-38628237 | None:intergenic |
GCCGACGAGGACGGGGAATG+GGG | 0.383317 | 7.3:-38628260 | None:intergenic |
CTGGAGGACGGCGGTTGGGT+TGG | 0.385556 | 7.3:-38628323 | None:intergenic |
GTGTGGAGGTTAAGAGGGTT+TGG | 0.390243 | 7.3:-38628192 | None:intergenic |
GAAGACTGGGATTAAGAGTT+TGG | 0.393386 | 7.3:+38628564 | MS.gene84630:CDS |
CACCCTCCCTCGTCGACACT+TGG | 0.398314 | 7.3:+38628212 | MS.gene84630:CDS |
TAGGTGTCGTGGGTGTCGTC+AGG | 0.398536 | 7.3:-38628139 | None:intergenic |
TCCTTGGCTTAATGTTGATC+AGG | 0.401282 | 7.3:+38628651 | MS.gene84630:CDS |
CTACTCATCGAAATCTTCTT+CGG | 0.406504 | 7.3:-38628619 | None:intergenic |
TTTCGAATTGCGTTGATTTG+AGG | 0.410612 | 7.3:+38628503 | MS.gene84630:CDS |
GGGAGGGTGTGGAGGTTAAG+AGG | 0.414631 | 7.3:-38628198 | None:intergenic |
AGTTTGGTGCAAAAGGTGAT+TGG | 0.419968 | 7.3:+38628580 | MS.gene84630:CDS |
AGAGGGAAACGGGGATGAAG+GGG | 0.423728 | 7.3:-38628390 | None:intergenic |
AAGGGTGTTTGTGTTGGTGT+TGG | 0.424399 | 7.3:-38628088 | None:intergenic |
AGGAAGTTTAAGAGGGAAAC+GGG | 0.424528 | 7.3:-38628400 | None:intergenic |
TAAGAGGGAAACGGGGATGA+AGG | 0.425030 | 7.3:-38628392 | None:intergenic |
TGGTGTTGGTGTTGGTGGTG+GGG | 0.427836 | 7.3:-38628074 | None:intergenic |
GGACGGCGGTTGGGTTGGAT+TGG | 0.429564 | 7.3:-38628318 | None:intergenic |
AGGCCGACGAGGACGGGGAA+TGG | 0.432576 | 7.3:-38628262 | None:intergenic |
GATGAGGAAATGTTGAAGAC+TGG | 0.437495 | 7.3:+38628550 | MS.gene84630:CDS |
TGTGTTGGTGTTGGTGTTGG+TGG | 0.444791 | 7.3:-38628079 | None:intergenic |
GAGGGAAACGGGGATGAAGG+GGG | 0.450783 | 7.3:-38628389 | None:intergenic |
CCGACGAGGACGGGGAATGG+GGG | 0.454648 | 7.3:-38628259 | None:intergenic |
GGAGGGTGTGGAGGTTAAGA+GGG | 0.454997 | 7.3:-38628197 | None:intergenic |
ACGTCGAGGCCGACGAGGAC+GGG | 0.456641 | 7.3:-38628268 | None:intergenic |
CGACGAGGACGGGGAATGGG+GGG | 0.460322 | 7.3:-38628258 | None:intergenic |
AGTGTCGACGAGGGAGGGTG+TGG | 0.465508 | 7.3:-38628209 | None:intergenic |
GAGGGTTTGGATTGTGAATG+TGG | 0.467871 | 7.3:-38628179 | None:intergenic |
GTTTGGTGCAAAAGGTGATT+GGG | 0.473049 | 7.3:+38628581 | MS.gene84630:CDS |
GAACCTTGCTGCTGAGGTGA+TGG | 0.476577 | 7.3:+38628525 | MS.gene84630:CDS |
AGAGCTGGAGGACGGCGGTT+GGG | 0.479670 | 7.3:-38628327 | None:intergenic |
TCGTCGGCCTCGACGTCGAA+TGG | 0.483004 | 7.3:+38628275 | MS.gene84630:CDS |
TCGTGATAGGATTTCCGTTA+CGG | 0.484481 | 7.3:-38628030 | None:intergenic |
TGAGTAGATGGGATTATCCT+TGG | 0.484935 | 7.3:+38628635 | MS.gene84630:CDS |
AAGAGGGAAACGGGGATGAA+GGG | 0.485449 | 7.3:-38628391 | None:intergenic |
AATAACAAATTCGTCGGTGT+TGG | 0.490558 | 7.3:+38628433 | MS.gene84630:CDS |
CGTCGAGGCCGACGAGGACG+GGG | 0.507428 | 7.3:-38628267 | None:intergenic |
ATCGATGATGGTGATGTTGA+AGG | 0.510696 | 7.3:-38628107 | None:intergenic |
GATTAAGAGTTTGGTGCAAA+AGG | 0.515705 | 7.3:+38628573 | MS.gene84630:CDS |
TTTGAGGAACCTTGCTGCTG+AGG | 0.523877 | 7.3:+38628519 | MS.gene84630:CDS |
CAGAGCTGGAGGACGGCGGT+TGG | 0.526096 | 7.3:-38628328 | None:intergenic |
ATGTTGAAGGGTGTTTGTGT+TGG | 0.526138 | 7.3:-38628094 | None:intergenic |
AAGGAAGTTTAAGAGGGAAA+CGG | 0.532402 | 7.3:-38628401 | None:intergenic |
ATCAGCAAGGAAGTTTAAGA+GGG | 0.539785 | 7.3:-38628407 | None:intergenic |
AGCCAAGTGTCGACGAGGGA+GGG | 0.544701 | 7.3:-38628214 | None:intergenic |
GAAGATTTCGATGAGTAGAT+GGG | 0.552844 | 7.3:+38628624 | MS.gene84630:CDS |
GAATGTGGAGTCGAAGGTGA+TGG | 0.564139 | 7.3:-38628164 | None:intergenic |
TCGATGATGGTGATGTTGAA+GGG | 0.569034 | 7.3:-38628106 | None:intergenic |
ACCTGATCAACATTAAGCCA+AGG | 0.571154 | 7.3:-38628652 | None:intergenic |
GAGCCAAGTGTCGACGAGGG+AGG | 0.572902 | 7.3:-38628215 | None:intergenic |
AGGGAGGTTGTGATCGATGA+TGG | 0.574676 | 7.3:-38628119 | None:intergenic |
GACGTCGAGGCCGACGAGGA+CGG | 0.578409 | 7.3:-38628269 | None:intergenic |
TGATTTGGAAAACGAGGCAG+CGG | 0.580087 | 7.3:-38628360 | None:intergenic |
AGGTGTCGTGGGTGTCGTCA+GGG | 0.586797 | 7.3:-38628138 | None:intergenic |
ATGAGGAAATGTTGAAGACT+GGG | 0.588822 | 7.3:+38628551 | MS.gene84630:CDS |
GATGCTAATAACAAATTCGT+CGG | 0.590726 | 7.3:+38628427 | MS.gene84630:CDS |
TCGGCCTCGACGTCGAATGG+CGG | 0.593048 | 7.3:+38628278 | MS.gene84630:CDS |
TCTTCTGATTCGAATAAAGA+CGG | 0.594450 | 7.3:-38628720 | None:intergenic |
GTCGACGAGGGAGGGTGTGG+AGG | 0.595655 | 7.3:-38628206 | None:intergenic |
AGCGGTTGTTGATACAGAGC+TGG | 0.604341 | 7.3:-38628342 | None:intergenic |
GGTGATGGAGTAGGTGTCGT+GGG | 0.611512 | 7.3:-38628149 | None:intergenic |
CGAGGAGCCAAGTGTCGACG+AGG | 0.620877 | 7.3:-38628219 | None:intergenic |
GTTGATACAGAGCTGGAGGA+CGG | 0.628505 | 7.3:-38628335 | None:intergenic |
CATCCATCACCTCAGCAGCA+AGG | 0.634719 | 7.3:-38628528 | None:intergenic |
TGGGCCGCCATTCGACGTCG+AGG | 0.635050 | 7.3:-38628282 | None:intergenic |
GATTGTGAATGTGGAGTCGA+AGG | 0.635408 | 7.3:-38628170 | None:intergenic |
ATTTGTTATTAGCATCAGCA+AGG | 0.638056 | 7.3:-38628420 | None:intergenic |
AGGTGATGGAGTAGGTGTCG+TGG | 0.650110 | 7.3:-38628150 | None:intergenic |
GGAGTCGAAGGTGATGGAGT+AGG | 0.650474 | 7.3:-38628158 | None:intergenic |
TGCTGAGGTGATGGATGATG+AGG | 0.653561 | 7.3:+38628534 | MS.gene84630:CDS |
GGTTGTTGATACAGAGCTGG+AGG | 0.678347 | 7.3:-38628339 | None:intergenic |
GATACAGAGCTGGAGGACGG+CGG | 0.684829 | 7.3:-38628332 | None:intergenic |
TGGCGGCCCAATTTCAAACG+CGG | 0.689573 | 7.3:+38628295 | MS.gene84630:CDS |
TGTCGTGGGTGTCGTCAGGG+AGG | 0.694424 | 7.3:-38628135 | None:intergenic |
GCTATCAAAAGAGACCGTAA+CGG | 0.694596 | 7.3:+38628016 | MS.gene84630:CDS |
GAGGAGCCAAGTGTCGACGA+GGG | 0.708020 | 7.3:-38628218 | None:intergenic |
ATTCGACGTCGAGGCCGACG+AGG | 0.710769 | 7.3:-38628273 | None:intergenic |
AGTGCATGATTTGGAAAACG+AGG | 0.711785 | 7.3:-38628366 | None:intergenic |
GGAAGTTTAAGAGGGAAACG+GGG | 0.730621 | 7.3:-38628399 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GATGCTAATAACAAATTCGT+CGG | + | chr7.3:38628427-38628446 | MS.gene84630:CDS | 30.0% | |
! | TCTTCTGATTCGAATAAAGA+CGG | - | chr7.3:38628723-38628742 | None:intergenic | 30.0% |
!! | ATTTGTTATTAGCATCAGCA+AGG | - | chr7.3:38628423-38628442 | None:intergenic | 30.0% |
AAGGAAGTTTAAGAGGGAAA+CGG | - | chr7.3:38628404-38628423 | None:intergenic | 35.0% | |
AATAACAAATTCGTCGGTGT+TGG | + | chr7.3:38628433-38628452 | MS.gene84630:CDS | 35.0% | |
AGAAGATTTCGATGAGTAGA+TGG | + | chr7.3:38628623-38628642 | MS.gene84630:CDS | 35.0% | |
ATCAGCAAGGAAGTTTAAGA+GGG | - | chr7.3:38628410-38628429 | None:intergenic | 35.0% | |
ATGAGGAAATGTTGAAGACT+GGG | + | chr7.3:38628551-38628570 | MS.gene84630:CDS | 35.0% | |
CTACTCATCGAAATCTTCTT+CGG | - | chr7.3:38628622-38628641 | None:intergenic | 35.0% | |
GAAGATTTCGATGAGTAGAT+GGG | + | chr7.3:38628624-38628643 | MS.gene84630:CDS | 35.0% | |
!! | GATTAAGAGTTTGGTGCAAA+AGG | + | chr7.3:38628573-38628592 | MS.gene84630:CDS | 35.0% |
!! | GCTTTTGTTTCGTTTGAGAT+TGG | + | chr7.3:38628694-38628713 | MS.gene84630:CDS | 35.0% |
!! | TTTCGAATTGCGTTGATTTG+AGG | + | chr7.3:38628503-38628522 | MS.gene84630:CDS | 35.0% |
ACCTGATCAACATTAAGCCA+AGG | - | chr7.3:38628655-38628674 | None:intergenic | 40.0% | |
AGGAAGTTTAAGAGGGAAAC+GGG | - | chr7.3:38628403-38628422 | None:intergenic | 40.0% | |
CATCAGCAAGGAAGTTTAAG+AGG | - | chr7.3:38628411-38628430 | None:intergenic | 40.0% | |
GAAGACTGGGATTAAGAGTT+TGG | + | chr7.3:38628564-38628583 | MS.gene84630:CDS | 40.0% | |
GATGAGGAAATGTTGAAGAC+TGG | + | chr7.3:38628550-38628569 | MS.gene84630:CDS | 40.0% | |
GCTATCAAAAGAGACCGTAA+CGG | + | chr7.3:38628016-38628035 | MS.gene84630:CDS | 40.0% | |
TCCTTGGCTTAATGTTGATC+AGG | + | chr7.3:38628651-38628670 | MS.gene84630:CDS | 40.0% | |
TCGTGATAGGATTTCCGTTA+CGG | - | chr7.3:38628033-38628052 | None:intergenic | 40.0% | |
TGAGTAGATGGGATTATCCT+TGG | + | chr7.3:38628635-38628654 | MS.gene84630:CDS | 40.0% | |
! | AGTGCATGATTTGGAAAACG+AGG | - | chr7.3:38628369-38628388 | None:intergenic | 40.0% |
! | ATCGATGATGGTGATGTTGA+AGG | - | chr7.3:38628110-38628129 | None:intergenic | 40.0% |
! | TCGATGATGGTGATGTTGAA+GGG | - | chr7.3:38628109-38628128 | None:intergenic | 40.0% |
!! | AGTTTGGTGCAAAAGGTGAT+TGG | + | chr7.3:38628580-38628599 | MS.gene84630:CDS | 40.0% |
!! | ATGTTGAAGGGTGTTTGTGT+TGG | - | chr7.3:38628097-38628116 | None:intergenic | 40.0% |
!! | GTTTGGTGCAAAAGGTGATT+GGG | + | chr7.3:38628581-38628600 | MS.gene84630:CDS | 40.0% |
GAGGGTTTGGATTGTGAATG+TGG | - | chr7.3:38628182-38628201 | None:intergenic | 45.0% | |
GATTGTGAATGTGGAGTCGA+AGG | - | chr7.3:38628173-38628192 | None:intergenic | 45.0% | |
GGAAGTTTAAGAGGGAAACG+GGG | - | chr7.3:38628402-38628421 | None:intergenic | 45.0% | |
! | GATTGGCCGCGTTTGAAATT+GGG | - | chr7.3:38628304-38628323 | None:intergenic | 45.0% |
! | TGATTTGGAAAACGAGGCAG+CGG | - | chr7.3:38628363-38628382 | None:intergenic | 45.0% |
!! | AAGGGTGTTTGTGTTGGTGT+TGG | - | chr7.3:38628091-38628110 | None:intergenic | 45.0% |
!! | GTTTGTGTTGGTGTTGGTGT+TGG | - | chr7.3:38628085-38628104 | None:intergenic | 45.0% |
AAGAGGGAAACGGGGATGAA+GGG | - | chr7.3:38628394-38628413 | None:intergenic | 50.0% | |
AGCGGTTGTTGATACAGAGC+TGG | - | chr7.3:38628345-38628364 | None:intergenic | 50.0% | |
AGGGAGGTTGTGATCGATGA+TGG | - | chr7.3:38628122-38628141 | None:intergenic | 50.0% | |
GAATGTGGAGTCGAAGGTGA+TGG | - | chr7.3:38628167-38628186 | None:intergenic | 50.0% | |
GGTTGTTGATACAGAGCTGG+AGG | - | chr7.3:38628342-38628361 | None:intergenic | 50.0% | |
GTGTGGAGGTTAAGAGGGTT+TGG | - | chr7.3:38628195-38628214 | None:intergenic | 50.0% | |
GTTGATACAGAGCTGGAGGA+CGG | - | chr7.3:38628338-38628357 | None:intergenic | 50.0% | |
TAAGAGGGAAACGGGGATGA+AGG | - | chr7.3:38628395-38628414 | None:intergenic | 50.0% | |
TTTGAGGAACCTTGCTGCTG+AGG | + | chr7.3:38628519-38628538 | MS.gene84630:CDS | 50.0% | |
! | TGAAGGGGGAGTGCATGATT+TGG | - | chr7.3:38628378-38628397 | None:intergenic | 50.0% |
!! | GGATTGGCCGCGTTTGAAAT+TGG | - | chr7.3:38628305-38628324 | None:intergenic | 50.0% |
!! | TGCTGAGGTGATGGATGATG+AGG | + | chr7.3:38628534-38628553 | MS.gene84630:CDS | 50.0% |
!! | TGTGTTGGTGTTGGTGTTGG+TGG | - | chr7.3:38628082-38628101 | None:intergenic | 50.0% |
!! | TTGGTGTTGGTGTTGGTGGT+GGG | - | chr7.3:38628078-38628097 | None:intergenic | 50.0% |
AGAGGGAAACGGGGATGAAG+GGG | - | chr7.3:38628393-38628412 | None:intergenic | 55.0% | |
CATCCATCACCTCAGCAGCA+AGG | - | chr7.3:38628531-38628550 | None:intergenic | 55.0% | |
GAACCTTGCTGCTGAGGTGA+TGG | + | chr7.3:38628525-38628544 | MS.gene84630:CDS | 55.0% | |
TGGCGGCCCAATTTCAAACG+CGG | + | chr7.3:38628295-38628314 | MS.gene84630:CDS | 55.0% | |
! | GGAGGGTGTGGAGGTTAAGA+GGG | - | chr7.3:38628200-38628219 | None:intergenic | 55.0% |
! | TTTGGAGTGGGGGTCGTGAT+AGG | - | chr7.3:38628046-38628065 | None:intergenic | 55.0% |
!! | AGGTGATGGAGTAGGTGTCG+TGG | - | chr7.3:38628153-38628172 | None:intergenic | 55.0% |
!! | GGAGTCGAAGGTGATGGAGT+AGG | - | chr7.3:38628161-38628180 | None:intergenic | 55.0% |
!! | GGTGATGGAGTAGGTGTCGT+GGG | - | chr7.3:38628152-38628171 | None:intergenic | 55.0% |
!! | GTTGGTGTTGGTGTTGGTGG+TGG | - | chr7.3:38628079-38628098 | None:intergenic | 55.0% |
!! | TGGTGTTGGTGTTGGTGGTG+GGG | - | chr7.3:38628077-38628096 | None:intergenic | 55.0% |
GAGGGAAACGGGGATGAAGG+GGG | - | chr7.3:38628392-38628411 | None:intergenic | 60.0% | |
GATACAGAGCTGGAGGACGG+CGG | - | chr7.3:38628335-38628354 | None:intergenic | 60.0% | |
! | AGGTGTCGTGGGTGTCGTCA+GGG | - | chr7.3:38628141-38628160 | None:intergenic | 60.0% |
! | GGGAGGGTGTGGAGGTTAAG+AGG | - | chr7.3:38628201-38628220 | None:intergenic | 60.0% |
! | GGGGGTGTAGGGTTTGGAGT+GGG | - | chr7.3:38628058-38628077 | None:intergenic | 60.0% |
! | GGGGTGTAGGGTTTGGAGTG+GGG | - | chr7.3:38628057-38628076 | None:intergenic | 60.0% |
! | GGGTGTAGGGTTTGGAGTGG+GGG | - | chr7.3:38628056-38628075 | None:intergenic | 60.0% |
! | TAGGTGTCGTGGGTGTCGTC+AGG | - | chr7.3:38628142-38628161 | None:intergenic | 60.0% |
! | TGGGGGTGTAGGGTTTGGAG+TGG | - | chr7.3:38628059-38628078 | None:intergenic | 60.0% |
!! | AGCCAAGTGTCGACGAGGGA+GGG | - | chr7.3:38628217-38628236 | None:intergenic | 60.0% |
!! | GAGGAGCCAAGTGTCGACGA+GGG | - | chr7.3:38628221-38628240 | None:intergenic | 60.0% |
!! | GGTGTTGGTGTTGGTGGTGG+GGG | - | chr7.3:38628076-38628095 | None:intergenic | 60.0% |
!! | GTGTTGGTGGTGGGGGTGTA+GGG | - | chr7.3:38628069-38628088 | None:intergenic | 60.0% |
AGAGCTGGAGGACGGCGGTT+GGG | - | chr7.3:38628330-38628349 | None:intergenic | 65.0% | |
ATTCGACGTCGAGGCCGACG+AGG | - | chr7.3:38628276-38628295 | None:intergenic | 65.0% | |
CACCCTCCCTCGTCGACACT+TGG | + | chr7.3:38628212-38628231 | MS.gene84630:CDS | 65.0% | |
TCGGCCTCGACGTCGAATGG+CGG | + | chr7.3:38628278-38628297 | MS.gene84630:CDS | 65.0% | |
TCGTCGGCCTCGACGTCGAA+TGG | + | chr7.3:38628275-38628294 | MS.gene84630:CDS | 65.0% | |
! | TGTCGTGGGTGTCGTCAGGG+AGG | - | chr7.3:38628138-38628157 | None:intergenic | 65.0% |
!! | AGTGTCGACGAGGGAGGGTG+TGG | - | chr7.3:38628212-38628231 | None:intergenic | 65.0% |
!! | CGAGGAGCCAAGTGTCGACG+AGG | - | chr7.3:38628222-38628241 | None:intergenic | 65.0% |
!! | GAGCCAAGTGTCGACGAGGG+AGG | - | chr7.3:38628218-38628237 | None:intergenic | 65.0% |
!! | GGACGGCGGTTGGGTTGGAT+TGG | - | chr7.3:38628321-38628340 | None:intergenic | 65.0% |
!! | GGTGGTGGGGGTGTAGGGTT+TGG | - | chr7.3:38628064-38628083 | None:intergenic | 65.0% |
!! | GGTGTTGGTGGTGGGGGTGT+AGG | - | chr7.3:38628070-38628089 | None:intergenic | 65.0% |
ACGTCGAGGCCGACGAGGAC+GGG | - | chr7.3:38628271-38628290 | None:intergenic | 70.0% | |
AGGCCGACGAGGACGGGGAA+TGG | - | chr7.3:38628265-38628284 | None:intergenic | 70.0% | |
CAGAGCTGGAGGACGGCGGT+TGG | - | chr7.3:38628331-38628350 | None:intergenic | 70.0% | |
CCCCCATTCCCCGTCCTCGT+CGG | + | chr7.3:38628259-38628278 | MS.gene84630:CDS | 70.0% | |
CCGACGAGGACGGGGAATGG+GGG | - | chr7.3:38628262-38628281 | None:intergenic | 70.0% | |
CGACGAGGACGGGGAATGGG+GGG | - | chr7.3:38628261-38628280 | None:intergenic | 70.0% | |
CTGGAGGACGGCGGTTGGGT+TGG | - | chr7.3:38628326-38628345 | None:intergenic | 70.0% | |
GAATGGGGGGTGGAGGCGGA+GGG | - | chr7.3:38628248-38628267 | None:intergenic | 70.0% | |
GACGTCGAGGCCGACGAGGA+CGG | - | chr7.3:38628272-38628291 | None:intergenic | 70.0% | |
GCCGACGAGGACGGGGAATG+GGG | - | chr7.3:38628263-38628282 | None:intergenic | 70.0% | |
GGCCGACGAGGACGGGGAAT+GGG | - | chr7.3:38628264-38628283 | None:intergenic | 70.0% | |
GGTGGAGGCGGAGGGTTTCG+AGG | - | chr7.3:38628240-38628259 | None:intergenic | 70.0% | |
TGGGCCGCCATTCGACGTCG+AGG | - | chr7.3:38628285-38628304 | None:intergenic | 70.0% | |
! | GTCGACGAGGGAGGGTGTGG+AGG | - | chr7.3:38628209-38628228 | None:intergenic | 70.0% |
CGAGGACGGGGAATGGGGGG+TGG | - | chr7.3:38628258-38628277 | None:intergenic | 75.0% | |
CGGGGAATGGGGGGTGGAGG+CGG | - | chr7.3:38628252-38628271 | None:intergenic | 75.0% | |
CGTCGAGGCCGACGAGGACG+GGG | - | chr7.3:38628270-38628289 | None:intergenic | 75.0% | |
GGAATGGGGGGTGGAGGCGG+AGG | - | chr7.3:38628249-38628268 | None:intergenic | 75.0% | |
GGACGGGGAATGGGGGGTGG+AGG | - | chr7.3:38628255-38628274 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 38628010 | 38628747 | 38628010 | ID=MS.gene84630 |
chr7.3 | mRNA | 38628010 | 38628747 | 38628010 | ID=MS.gene84630.t1;Parent=MS.gene84630 |
chr7.3 | exon | 38628010 | 38628747 | 38628010 | ID=MS.gene84630.t1.exon1;Parent=MS.gene84630.t1 |
chr7.3 | CDS | 38628010 | 38628747 | 38628010 | ID=cds.MS.gene84630.t1;Parent=MS.gene84630.t1 |
Gene Sequence |
Protein sequence |