Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055063.t1 | XP_024626174.1 | 90.5 | 242 | 21 | 1 | 1 | 242 | 1 | 240 | 6.80E-108 | 400.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055063.t1 | O09053 | 34.9 | 152 | 96 | 2 | 87 | 237 | 72 | 221 | 2.5e-18 | 94.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055063.t1 | A0A396GZB8 | 89.5 | 219 | 21 | 1 | 1 | 219 | 1 | 217 | 2.4e-94 | 354.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054950 | MS.gene055063 | 0.802822 | 4.67E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene06412 | 0.807725 | 4.39E-50 | -1.69E-46 |
| MS.gene055063 | MS.gene066113 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene069110 | -0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene055063 | MS.gene070713 | 0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene071667 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene055063 | MS.gene071670 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene072970 | -0.800549 | 1.37E-48 | -1.69E-46 |
| MS.gene055063 | MS.gene34115 | -0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene37431 | 0.811405 | 7.12E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene39376 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene055063 | MS.gene39695 | 0.827662 | 1.38E-54 | -1.69E-46 |
| MS.gene055063 | MS.gene44406 | 0.80017 | 1.63E-48 | -1.69E-46 |
| MS.gene055063 | MS.gene44407 | 0.813923 | 2.00E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene51650 | -0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene055063 | MS.gene56285 | -0.811239 | 7.73E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene63539 | -0.814848 | 1.25E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene77208 | -0.802938 | 4.42E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene77971 | 0.814733 | 1.33E-51 | -1.69E-46 |
| MS.gene055063 | MS.gene82352 | -0.800005 | 1.77E-48 | -1.69E-46 |
| MS.gene055063 | MS.gene82354 | -0.822269 | 2.59E-53 | -1.69E-46 |
| MS.gene055063 | MS.gene82976 | -0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene055063 | MS.gene84630 | 0.812782 | 3.57E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055063.t1 | AT4G13870 | 32.447 | 188 | 117 | 5 | 57 | 237 | 94 | 278 | 3.82e-26 | 103 |
| MS.gene055063.t1 | AT4G13870 | 32.609 | 184 | 114 | 5 | 57 | 233 | 94 | 274 | 6.50e-26 | 102 |
| MS.gene055063.t1 | AT2G36110 | 32.474 | 194 | 117 | 6 | 46 | 234 | 14 | 198 | 1.61e-22 | 92.8 |
| MS.gene055063.t1 | AT3G12410 | 28.774 | 212 | 128 | 7 | 44 | 234 | 13 | 222 | 4.62e-21 | 88.6 |
| MS.gene055063.t1 | AT3G12460 | 27.039 | 233 | 131 | 9 | 45 | 242 | 13 | 241 | 2.57e-20 | 87.0 |
| MS.gene055063.t1 | AT3G12430 | 25.352 | 213 | 124 | 7 | 53 | 234 | 22 | 230 | 4.93e-17 | 77.8 |
| MS.gene055063.t1 | AT3G12470 | 29.744 | 195 | 129 | 6 | 45 | 234 | 13 | 204 | 5.21e-17 | 77.4 |
| MS.gene055063.t1 | AT3G12440 | 31.034 | 174 | 111 | 6 | 69 | 236 | 177 | 347 | 3.02e-15 | 74.3 |
| MS.gene055063.t1 | AT3G12420 | 27.976 | 168 | 80 | 6 | 45 | 173 | 13 | 178 | 2.95e-11 | 60.8 |
Find 94 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTGGCCGCGTTTGAAAT+TGG | 0.191758 | 7.4:-37964456 | None:intergenic |
| GTTAGTGTTGGTGTTGGTGG+TGG | 0.218710 | 7.4:-37964236 | None:intergenic |
| CGTCAGCAAGGAAGTTTATA+AGG | 0.227249 | 7.4:-37964562 | None:intergenic |
| GGGGTTTAGGGTTTGGAGTG+AGG | 0.289296 | 7.4:-37964214 | None:intergenic |
| TTTAGGGTTTGGAGTGAGGG+TGG | 0.328345 | 7.4:-37964210 | None:intergenic |
| TTAGTGTTGGTGTTGGTGGT+GGG | 0.329723 | 7.4:-37964235 | None:intergenic |
| GATATGGAGATGTTGAAAAC+TGG | 0.355491 | 7.4:+37964704 | MS.gene055063:CDS |
| GAAAACTGGGATTAAGAGTT+TGG | 0.355504 | 7.4:+37964718 | MS.gene055063:CDS |
| GATTGGCCGCGTTTGAAATT+GGG | 0.355658 | 7.4:-37964455 | None:intergenic |
| AGTGTTGGTGTTGGTGGTGG+GGG | 0.355904 | 7.4:-37964233 | None:intergenic |
| AGAAGATTTCCATGAGTAGA+TGG | 0.356802 | 7.4:+37964777 | MS.gene055063:CDS |
| GGCCGACGAGGACGGGGAAT+GGG | 0.358360 | 7.4:-37964415 | None:intergenic |
| CACCCTCCCTCGTCGATACT+TGG | 0.361014 | 7.4:+37964366 | MS.gene055063:CDS |
| GGGTTTAGGGTTTGGAGTGA+GGG | 0.361224 | 7.4:-37964213 | None:intergenic |
| GGTGTTAGTGTTGGTGTTGG+TGG | 0.364612 | 7.4:-37964239 | None:intergenic |
| TTTGGAGTGAGGGTGGTGAT+AGG | 0.377909 | 7.4:-37964203 | None:intergenic |
| GGTGGAGGCGGAGGGTTTCG+AGG | 0.382099 | 7.4:-37964391 | None:intergenic |
| GCCGACGAGGACGGGGAATG+GGG | 0.383317 | 7.4:-37964414 | None:intergenic |
| TTTCGAATTGCGTTGATTTG+AGG | 0.384255 | 7.4:+37964657 | MS.gene055063:CDS |
| CTGGAGGACGGCGGTTGGGT+TGG | 0.385556 | 7.4:-37964477 | None:intergenic |
| GTGTGGAGGTTAAGAGGGTT+TGG | 0.390243 | 7.4:-37964346 | None:intergenic |
| CTACTCATGGAAATCTTCTT+CGG | 0.392852 | 7.4:-37964773 | None:intergenic |
| TAGGTGTCGTGGGTGTCGTC+AGG | 0.398536 | 7.4:-37964293 | None:intergenic |
| GGGAGGGTGTGGAGGTTAAG+AGG | 0.414631 | 7.4:-37964352 | None:intergenic |
| TCCCTGGCTTAATGTTGATC+AGG | 0.417092 | 7.4:+37964805 | MS.gene055063:CDS |
| TATAAGGGAAACGGGGATGA+AGG | 0.418769 | 7.4:-37964546 | None:intergenic |
| AGTTTGGTGCAAAAGGTGAT+TGG | 0.419968 | 7.4:+37964734 | MS.gene055063:CDS |
| TAAGGGAAACGGGGATGAAG+GGG | 0.423728 | 7.4:-37964544 | None:intergenic |
| GGACGGCGGTTGGGTTGGAT+TGG | 0.429564 | 7.4:-37964472 | None:intergenic |
| AGGCCGACGAGGACGGGGAA+TGG | 0.432576 | 7.4:-37964416 | None:intergenic |
| AGGAAGTTTATAAGGGAAAC+GGG | 0.434635 | 7.4:-37964554 | None:intergenic |
| TGCTGAGGTGATGGATGATA+TGG | 0.440739 | 7.4:+37964688 | MS.gene055063:CDS |
| GAGGGTTTGGATTGTGAAGG+TGG | 0.448669 | 7.4:-37964333 | None:intergenic |
| AAGGGAAACGGGGATGAAGG+GGG | 0.450783 | 7.4:-37964543 | None:intergenic |
| TAGTGTTGGTGTTGGTGGTG+GGG | 0.452328 | 7.4:-37964234 | None:intergenic |
| CCGACGAGGACGGGGAATGG+GGG | 0.454648 | 7.4:-37964413 | None:intergenic |
| GGAGGGTGTGGAGGTTAAGA+GGG | 0.454997 | 7.4:-37964351 | None:intergenic |
| TGGTGATAGGATTTCCGTTA+CGG | 0.455191 | 7.4:-37964190 | None:intergenic |
| ACGTCGAGGCCGACGAGGAC+GGG | 0.456641 | 7.4:-37964422 | None:intergenic |
| CGACGAGGACGGGGAATGGG+GGG | 0.460322 | 7.4:-37964412 | None:intergenic |
| AAGGGTGTTAGTGTTGGTGT+TGG | 0.464436 | 7.4:-37964242 | None:intergenic |
| GTCAGCAAGGAAGTTTATAA+GGG | 0.466445 | 7.4:-37964561 | None:intergenic |
| GTTTGGTGCAAAAGGTGATT+GGG | 0.473049 | 7.4:+37964735 | MS.gene055063:CDS |
| AATAACAAATTCGTAGGTGT+TGG | 0.476269 | 7.4:+37964587 | MS.gene055063:CDS |
| GAACCTTGCTGCTGAGGTGA+TGG | 0.476577 | 7.4:+37964679 | MS.gene055063:CDS |
| AGAGCTGGAGGACGGCGGTT+GGG | 0.479670 | 7.4:-37964481 | None:intergenic |
| TCGTCGGCCTCGACGTCGAA+TGG | 0.483004 | 7.4:+37964429 | MS.gene055063:CDS |
| GTCGATGATGGTGATGTTGA+AGG | 0.484947 | 7.4:-37964261 | None:intergenic |
| AACCTGATCAACATTAAGCC+AGG | 0.493703 | 7.4:-37964807 | None:intergenic |
| ATAAGGGAAACGGGGATGAA+GGG | 0.496233 | 7.4:-37964545 | None:intergenic |
| AGTATCGACGAGGGAGGGTG+TGG | 0.503840 | 7.4:-37964363 | None:intergenic |
| CGTCGAGGCCGACGAGGACG+GGG | 0.507428 | 7.4:-37964421 | None:intergenic |
| AAGGAAGTTTATAAGGGAAA+CGG | 0.508177 | 7.4:-37964555 | None:intergenic |
| GATTAAGAGTTTGGTGCAAA+AGG | 0.515705 | 7.4:+37964727 | MS.gene055063:CDS |
| TTTGAGGAACCTTGCTGCTG+AGG | 0.523877 | 7.4:+37964673 | MS.gene055063:CDS |
| CAGAGCTGGAGGACGGCGGT+TGG | 0.526096 | 7.4:-37964482 | None:intergenic |
| GGGTGTCGTCAGGGAGGTCG+TGG | 0.527763 | 7.4:-37964283 | None:intergenic |
| AGGGAGGTCGTGGTCGATGA+TGG | 0.536096 | 7.4:-37964273 | None:intergenic |
| TGAGTAGATGGGATTATCCC+TGG | 0.542320 | 7.4:+37964789 | MS.gene055063:CDS |
| GGAGTCGAAGGTGATGGAGT+AGG | 0.544496 | 7.4:-37964312 | None:intergenic |
| GGGATAATCCCATCTACTCA+TGG | 0.546970 | 7.4:-37964786 | None:intergenic |
| GAAGATTTCCATGAGTAGAT+GGG | 0.549163 | 7.4:+37964778 | MS.gene055063:CDS |
| GAAGGTGGAGTCGAAGGTGA+TGG | 0.564139 | 7.4:-37964318 | None:intergenic |
| ATGTTGAAGGGTGTTAGTGT+TGG | 0.569592 | 7.4:-37964248 | None:intergenic |
| TAAGAGGGTTTGGATTGTGA+AGG | 0.570432 | 7.4:-37964336 | None:intergenic |
| GACGTCGAGGCCGACGAGGA+CGG | 0.578409 | 7.4:-37964423 | None:intergenic |
| ATATGGAGATGTTGAAAACT+GGG | 0.580050 | 7.4:+37964705 | MS.gene055063:CDS |
| TGATTTGGAAAACGAGGCAG+CGG | 0.580087 | 7.4:-37964514 | None:intergenic |
| TCGATGATGGTGATGTTGAA+GGG | 0.580464 | 7.4:-37964260 | None:intergenic |
| GATTGTGAAGGTGGAGTCGA+AGG | 0.584411 | 7.4:-37964324 | None:intergenic |
| AGGTGTCGTGGGTGTCGTCA+GGG | 0.586797 | 7.4:-37964292 | None:intergenic |
| TCGGCCTCGACGTCGAATGG+CGG | 0.593048 | 7.4:+37964432 | MS.gene055063:CDS |
| ACCTGATCAACATTAAGCCA+GGG | 0.593351 | 7.4:-37964806 | None:intergenic |
| ATCGACGAGGGAGGGTGTGG+AGG | 0.598094 | 7.4:-37964360 | None:intergenic |
| AGCGGTTGTTGATACAGAGC+TGG | 0.604341 | 7.4:-37964496 | None:intergenic |
| GGTGATGGAGTAGGTGTCGT+GGG | 0.611512 | 7.4:-37964303 | None:intergenic |
| AGCCAAGTATCGACGAGGGA+GGG | 0.616255 | 7.4:-37964368 | None:intergenic |
| GTTGATACAGAGCTGGAGGA+CGG | 0.628505 | 7.4:-37964489 | None:intergenic |
| ATTTGTTATTAGCGTCAGCA+AGG | 0.634176 | 7.4:-37964574 | None:intergenic |
| TGGGCCGCCATTCGACGTCG+AGG | 0.635050 | 7.4:-37964436 | None:intergenic |
| CATCCATCACCTCAGCAGCA+AGG | 0.635637 | 7.4:-37964682 | None:intergenic |
| GACGCTAATAACAAATTCGT+AGG | 0.635981 | 7.4:+37964581 | MS.gene055063:CDS |
| GAGCCAAGTATCGACGAGGG+AGG | 0.646877 | 7.4:-37964369 | None:intergenic |
| AGGTGATGGAGTAGGTGTCG+TGG | 0.650110 | 7.4:-37964304 | None:intergenic |
| CGAGGAGCCAAGTATCGACG+AGG | 0.661951 | 7.4:-37964373 | None:intergenic |
| GGTTGTTGATACAGAGCTGG+AGG | 0.678347 | 7.4:-37964493 | None:intergenic |
| GATACAGAGCTGGAGGACGG+CGG | 0.684829 | 7.4:-37964486 | None:intergenic |
| TGGCGGCCCAATTTCAAACG+CGG | 0.689573 | 7.4:+37964449 | MS.gene055063:CDS |
| GCTATCAAAAGAGACCGTAA+CGG | 0.694596 | 7.4:+37964176 | MS.gene055063:CDS |
| TGTCGTGGGTGTCGTCAGGG+AGG | 0.702372 | 7.4:-37964289 | None:intergenic |
| ATTCGACGTCGAGGCCGACG+AGG | 0.710769 | 7.4:-37964427 | None:intergenic |
| AGTGCATGATTTGGAAAACG+AGG | 0.711785 | 7.4:-37964520 | None:intergenic |
| GAGGAGCCAAGTATCGACGA+GGG | 0.730832 | 7.4:-37964372 | None:intergenic |
| GGAAGTTTATAAGGGAAACG+GGG | 0.747570 | 7.4:-37964553 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTGTTTCGAATAAAGA+CGG | - | chr7.4:37964877-37964896 | None:intergenic | 20.0% |
| AAGGAAGTTTATAAGGGAAA+CGG | - | chr7.4:37964558-37964577 | None:intergenic | 30.0% | |
| AATAACAAATTCGTAGGTGT+TGG | + | chr7.4:37964587-37964606 | MS.gene055063:CDS | 30.0% | |
| ATATGGAGATGTTGAAAACT+GGG | + | chr7.4:37964705-37964724 | MS.gene055063:CDS | 30.0% | |
| AGAAGATTTCCATGAGTAGA+TGG | + | chr7.4:37964777-37964796 | MS.gene055063:CDS | 35.0% | |
| AGGAAGTTTATAAGGGAAAC+GGG | - | chr7.4:37964557-37964576 | None:intergenic | 35.0% | |
| CTACTCATGGAAATCTTCTT+CGG | - | chr7.4:37964776-37964795 | None:intergenic | 35.0% | |
| GAAAACTGGGATTAAGAGTT+TGG | + | chr7.4:37964718-37964737 | MS.gene055063:CDS | 35.0% | |
| GAAGATTTCCATGAGTAGAT+GGG | + | chr7.4:37964778-37964797 | MS.gene055063:CDS | 35.0% | |
| GACGCTAATAACAAATTCGT+AGG | + | chr7.4:37964581-37964600 | MS.gene055063:CDS | 35.0% | |
| GATATGGAGATGTTGAAAAC+TGG | + | chr7.4:37964704-37964723 | MS.gene055063:CDS | 35.0% | |
| GTCAGCAAGGAAGTTTATAA+GGG | - | chr7.4:37964564-37964583 | None:intergenic | 35.0% | |
| !! | ATTTGTTATTAGCGTCAGCA+AGG | - | chr7.4:37964577-37964596 | None:intergenic | 35.0% |
| !! | GATTAAGAGTTTGGTGCAAA+AGG | + | chr7.4:37964727-37964746 | MS.gene055063:CDS | 35.0% |
| !! | GCTTTTGTTTCGTTTGAGAT+TGG | + | chr7.4:37964848-37964867 | MS.gene055063:CDS | 35.0% |
| !! | TTTCGAATTGCGTTGATTTG+AGG | + | chr7.4:37964657-37964676 | MS.gene055063:CDS | 35.0% |
| AACCTGATCAACATTAAGCC+AGG | - | chr7.4:37964810-37964829 | None:intergenic | 40.0% | |
| ACCTGATCAACATTAAGCCA+GGG | - | chr7.4:37964809-37964828 | None:intergenic | 40.0% | |
| CGTCAGCAAGGAAGTTTATA+AGG | - | chr7.4:37964565-37964584 | None:intergenic | 40.0% | |
| GCTATCAAAAGAGACCGTAA+CGG | + | chr7.4:37964176-37964195 | MS.gene055063:CDS | 40.0% | |
| GGAAGTTTATAAGGGAAACG+GGG | - | chr7.4:37964556-37964575 | None:intergenic | 40.0% | |
| TAAGAGGGTTTGGATTGTGA+AGG | - | chr7.4:37964339-37964358 | None:intergenic | 40.0% | |
| TGGTGATAGGATTTCCGTTA+CGG | - | chr7.4:37964193-37964212 | None:intergenic | 40.0% | |
| ! | AGTGCATGATTTGGAAAACG+AGG | - | chr7.4:37964523-37964542 | None:intergenic | 40.0% |
| ! | TCGATGATGGTGATGTTGAA+GGG | - | chr7.4:37964263-37964282 | None:intergenic | 40.0% |
| !! | AGTTTGGTGCAAAAGGTGAT+TGG | + | chr7.4:37964734-37964753 | MS.gene055063:CDS | 40.0% |
| !! | ATGTTGAAGGGTGTTAGTGT+TGG | - | chr7.4:37964251-37964270 | None:intergenic | 40.0% |
| !! | GTTTGGTGCAAAAGGTGATT+GGG | + | chr7.4:37964735-37964754 | MS.gene055063:CDS | 40.0% |
| ATAAGGGAAACGGGGATGAA+GGG | - | chr7.4:37964548-37964567 | None:intergenic | 45.0% | |
| GGGATAATCCCATCTACTCA+TGG | - | chr7.4:37964789-37964808 | None:intergenic | 45.0% | |
| TATAAGGGAAACGGGGATGA+AGG | - | chr7.4:37964549-37964568 | None:intergenic | 45.0% | |
| TCCCTGGCTTAATGTTGATC+AGG | + | chr7.4:37964805-37964824 | MS.gene055063:CDS | 45.0% | |
| TGAGTAGATGGGATTATCCC+TGG | + | chr7.4:37964789-37964808 | MS.gene055063:CDS | 45.0% | |
| ! | GATTGGCCGCGTTTGAAATT+GGG | - | chr7.4:37964458-37964477 | None:intergenic | 45.0% |
| ! | GTCGATGATGGTGATGTTGA+AGG | - | chr7.4:37964264-37964283 | None:intergenic | 45.0% |
| ! | TGATTTGGAAAACGAGGCAG+CGG | - | chr7.4:37964517-37964536 | None:intergenic | 45.0% |
| !! | AAGGGTGTTAGTGTTGGTGT+TGG | - | chr7.4:37964245-37964264 | None:intergenic | 45.0% |
| !! | TGCTGAGGTGATGGATGATA+TGG | + | chr7.4:37964688-37964707 | MS.gene055063:CDS | 45.0% |
| !! | TTAGTGTTGGTGTTGGTGGT+GGG | - | chr7.4:37964238-37964257 | None:intergenic | 45.0% |
| AGCGGTTGTTGATACAGAGC+TGG | - | chr7.4:37964499-37964518 | None:intergenic | 50.0% | |
| GAGGGTTTGGATTGTGAAGG+TGG | - | chr7.4:37964336-37964355 | None:intergenic | 50.0% | |
| GATTGTGAAGGTGGAGTCGA+AGG | - | chr7.4:37964327-37964346 | None:intergenic | 50.0% | |
| GGTTGTTGATACAGAGCTGG+AGG | - | chr7.4:37964496-37964515 | None:intergenic | 50.0% | |
| GTGTGGAGGTTAAGAGGGTT+TGG | - | chr7.4:37964349-37964368 | None:intergenic | 50.0% | |
| GTTGATACAGAGCTGGAGGA+CGG | - | chr7.4:37964492-37964511 | None:intergenic | 50.0% | |
| TAAGGGAAACGGGGATGAAG+GGG | - | chr7.4:37964547-37964566 | None:intergenic | 50.0% | |
| TTTGAGGAACCTTGCTGCTG+AGG | + | chr7.4:37964673-37964692 | MS.gene055063:CDS | 50.0% | |
| ! | GGGTTTAGGGTTTGGAGTGA+GGG | - | chr7.4:37964216-37964235 | None:intergenic | 50.0% |
| ! | TGAAGGGGGAGTGCATGATT+TGG | - | chr7.4:37964532-37964551 | None:intergenic | 50.0% |
| ! | TTTAGGGTTTGGAGTGAGGG+TGG | - | chr7.4:37964213-37964232 | None:intergenic | 50.0% |
| ! | TTTGGAGTGAGGGTGGTGAT+AGG | - | chr7.4:37964206-37964225 | None:intergenic | 50.0% |
| !! | GGATTGGCCGCGTTTGAAAT+TGG | - | chr7.4:37964459-37964478 | None:intergenic | 50.0% |
| !! | GGTGTTAGTGTTGGTGTTGG+TGG | - | chr7.4:37964242-37964261 | None:intergenic | 50.0% |
| !! | GTTAGTGTTGGTGTTGGTGG+TGG | - | chr7.4:37964239-37964258 | None:intergenic | 50.0% |
| !! | TAGTGTTGGTGTTGGTGGTG+GGG | - | chr7.4:37964237-37964256 | None:intergenic | 50.0% |
| AAGGGAAACGGGGATGAAGG+GGG | - | chr7.4:37964546-37964565 | None:intergenic | 55.0% | |
| CATCCATCACCTCAGCAGCA+AGG | - | chr7.4:37964685-37964704 | None:intergenic | 55.0% | |
| GAACCTTGCTGCTGAGGTGA+TGG | + | chr7.4:37964679-37964698 | MS.gene055063:CDS | 55.0% | |
| GAAGGTGGAGTCGAAGGTGA+TGG | - | chr7.4:37964321-37964340 | None:intergenic | 55.0% | |
| TGGCGGCCCAATTTCAAACG+CGG | + | chr7.4:37964449-37964468 | MS.gene055063:CDS | 55.0% | |
| ! | GGAGGGTGTGGAGGTTAAGA+GGG | - | chr7.4:37964354-37964373 | None:intergenic | 55.0% |
| ! | GGGGTTTAGGGTTTGGAGTG+AGG | - | chr7.4:37964217-37964236 | None:intergenic | 55.0% |
| !! | AGCCAAGTATCGACGAGGGA+GGG | - | chr7.4:37964371-37964390 | None:intergenic | 55.0% |
| !! | AGGTGATGGAGTAGGTGTCG+TGG | - | chr7.4:37964307-37964326 | None:intergenic | 55.0% |
| !! | AGTGTTGGTGTTGGTGGTGG+GGG | - | chr7.4:37964236-37964255 | None:intergenic | 55.0% |
| !! | GAGGAGCCAAGTATCGACGA+GGG | - | chr7.4:37964375-37964394 | None:intergenic | 55.0% |
| !! | GGAGTCGAAGGTGATGGAGT+AGG | - | chr7.4:37964315-37964334 | None:intergenic | 55.0% |
| !! | GGTGATGGAGTAGGTGTCGT+GGG | - | chr7.4:37964306-37964325 | None:intergenic | 55.0% |
| !! | GTGTTGGTGGTGGGGGTTTA+GGG | - | chr7.4:37964229-37964248 | None:intergenic | 55.0% |
| AGGGAGGTCGTGGTCGATGA+TGG | - | chr7.4:37964276-37964295 | None:intergenic | 60.0% | |
| CACCCTCCCTCGTCGATACT+TGG | + | chr7.4:37964366-37964385 | MS.gene055063:CDS | 60.0% | |
| GATACAGAGCTGGAGGACGG+CGG | - | chr7.4:37964489-37964508 | None:intergenic | 60.0% | |
| ! | AGGTGTCGTGGGTGTCGTCA+GGG | - | chr7.4:37964295-37964314 | None:intergenic | 60.0% |
| ! | GGGAGGGTGTGGAGGTTAAG+AGG | - | chr7.4:37964355-37964374 | None:intergenic | 60.0% |
| ! | TAGGTGTCGTGGGTGTCGTC+AGG | - | chr7.4:37964296-37964315 | None:intergenic | 60.0% |
| !! | AGTATCGACGAGGGAGGGTG+TGG | - | chr7.4:37964366-37964385 | None:intergenic | 60.0% |
| !! | CGAGGAGCCAAGTATCGACG+AGG | - | chr7.4:37964376-37964395 | None:intergenic | 60.0% |
| !! | GAGCCAAGTATCGACGAGGG+AGG | - | chr7.4:37964372-37964391 | None:intergenic | 60.0% |
| !! | GGTGGTGGGGGTTTAGGGTT+TGG | - | chr7.4:37964224-37964243 | None:intergenic | 60.0% |
| !! | GGTGTTGGTGGTGGGGGTTT+AGG | - | chr7.4:37964230-37964249 | None:intergenic | 60.0% |
| AGAGCTGGAGGACGGCGGTT+GGG | - | chr7.4:37964484-37964503 | None:intergenic | 65.0% | |
| ATTCGACGTCGAGGCCGACG+AGG | - | chr7.4:37964430-37964449 | None:intergenic | 65.0% | |
| TCGGCCTCGACGTCGAATGG+CGG | + | chr7.4:37964432-37964451 | MS.gene055063:CDS | 65.0% | |
| TCGTCGGCCTCGACGTCGAA+TGG | + | chr7.4:37964429-37964448 | MS.gene055063:CDS | 65.0% | |
| ! | ATCGACGAGGGAGGGTGTGG+AGG | - | chr7.4:37964363-37964382 | None:intergenic | 65.0% |
| ! | TGTCGTGGGTGTCGTCAGGG+AGG | - | chr7.4:37964292-37964311 | None:intergenic | 65.0% |
| !! | GGACGGCGGTTGGGTTGGAT+TGG | - | chr7.4:37964475-37964494 | None:intergenic | 65.0% |
| ACGTCGAGGCCGACGAGGAC+GGG | - | chr7.4:37964425-37964444 | None:intergenic | 70.0% | |
| AGGCCGACGAGGACGGGGAA+TGG | - | chr7.4:37964419-37964438 | None:intergenic | 70.0% | |
| CAGAGCTGGAGGACGGCGGT+TGG | - | chr7.4:37964485-37964504 | None:intergenic | 70.0% | |
| CCCCCATTCCCCGTCCTCGT+CGG | + | chr7.4:37964413-37964432 | MS.gene055063:CDS | 70.0% | |
| CCGACGAGGACGGGGAATGG+GGG | - | chr7.4:37964416-37964435 | None:intergenic | 70.0% | |
| CGACGAGGACGGGGAATGGG+GGG | - | chr7.4:37964415-37964434 | None:intergenic | 70.0% | |
| CTGGAGGACGGCGGTTGGGT+TGG | - | chr7.4:37964480-37964499 | None:intergenic | 70.0% | |
| GAATGGGGGGTGGAGGCGGA+GGG | - | chr7.4:37964402-37964421 | None:intergenic | 70.0% | |
| GACGTCGAGGCCGACGAGGA+CGG | - | chr7.4:37964426-37964445 | None:intergenic | 70.0% | |
| GCCGACGAGGACGGGGAATG+GGG | - | chr7.4:37964417-37964436 | None:intergenic | 70.0% | |
| GGCCGACGAGGACGGGGAAT+GGG | - | chr7.4:37964418-37964437 | None:intergenic | 70.0% | |
| GGTGGAGGCGGAGGGTTTCG+AGG | - | chr7.4:37964394-37964413 | None:intergenic | 70.0% | |
| TGGGCCGCCATTCGACGTCG+AGG | - | chr7.4:37964439-37964458 | None:intergenic | 70.0% | |
| ! | GGGTGTCGTCAGGGAGGTCG+TGG | - | chr7.4:37964286-37964305 | None:intergenic | 70.0% |
| CGAGGACGGGGAATGGGGGG+TGG | - | chr7.4:37964412-37964431 | None:intergenic | 75.0% | |
| CGGGGAATGGGGGGTGGAGG+CGG | - | chr7.4:37964406-37964425 | None:intergenic | 75.0% | |
| CGTCGAGGCCGACGAGGACG+GGG | - | chr7.4:37964424-37964443 | None:intergenic | 75.0% | |
| GGAATGGGGGGTGGAGGCGG+AGG | - | chr7.4:37964403-37964422 | None:intergenic | 75.0% | |
| GGACGGGGAATGGGGGGTGG+AGG | - | chr7.4:37964409-37964428 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 37964170 | 37964898 | 37964170 | ID=MS.gene055063 |
| chr7.4 | mRNA | 37964170 | 37964898 | 37964170 | ID=MS.gene055063.t1;Parent=MS.gene055063 |
| chr7.4 | exon | 37964170 | 37964898 | 37964170 | ID=MS.gene055063.t1.exon1;Parent=MS.gene055063.t1 |
| chr7.4 | CDS | 37964170 | 37964898 | 37964170 | ID=cds.MS.gene055063.t1;Parent=MS.gene055063.t1 |
| Gene Sequence |
| Protein sequence |
