AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84740.t1 MTR_8g027295 96.654 269 6 2 1 266 1 269 0.0 527
MS.gene84740.t1 MTR_3g091820 45.973 298 121 12 1 266 17 306 2.82e-68 214
MS.gene84740.t1 MTR_1g077600 45.788 273 96 15 4 257 21 260 1.22e-50 167
MS.gene84740.t1 MTR_1g077600 45.788 273 96 15 4 257 21 260 1.75e-50 167
MS.gene84740.t1 MTR_2g093220 75.000 72 16 1 9 78 23 94 8.78e-34 124
MS.gene84740.t1 MTR_3g077750 52.000 125 45 4 10 130 45 158 9.77e-31 117
MS.gene84740.t1 MTR_8g479350 54.808 104 41 2 21 124 65 162 1.67e-30 116
MS.gene84740.t1 MTR_4g063780 72.059 68 19 0 11 78 62 129 3.42e-30 115
MS.gene84740.t1 MTR_8g068210 66.250 80 24 2 15 92 21 99 1.17e-29 114
MS.gene84740.t1 MTR_4g022370 43.796 137 70 2 11 140 69 205 1.59e-29 114
MS.gene84740.t1 MTR_4g461080 69.014 71 20 1 8 76 11 81 1.63e-29 112
MS.gene84740.t1 MTR_3g090430 76.562 64 13 1 17 78 42 105 2.36e-29 113
MS.gene84740.t1 MTR_4g088580 73.529 68 14 1 26 93 57 120 3.68e-29 114
MS.gene84740.t1 MTR_1g056810 87.037 54 7 0 25 78 13 66 6.18e-29 111
MS.gene84740.t1 MTR_8g079060 48.214 112 48 2 11 116 10 117 7.46e-29 109
MS.gene84740.t1 MTR_2g096740 63.636 77 28 0 21 97 59 135 1.03e-28 110
MS.gene84740.t1 MTR_2g096740 66.216 74 25 0 24 97 77 150 1.24e-28 110
MS.gene84740.t1 MTR_2g014060 77.966 59 12 1 17 75 19 76 5.78e-28 109
MS.gene84740.t1 MTR_5g031440 78.182 55 12 0 20 74 39 93 7.79e-28 109
MS.gene84740.t1 MTR_8g015840 72.131 61 17 0 21 81 17 77 1.69e-27 105
MS.gene84740.t1 MTR_7g024670 83.019 53 9 0 26 78 79 131 5.30e-27 107
MS.gene84740.t1 MTR_7g059400 79.245 53 11 0 26 78 78 130 7.10e-27 107
MS.gene84740.t1 MTR_2g013370 58.108 74 30 1 6 79 28 100 1.01e-26 105
MS.gene84740.t1 MTR_4g089095 74.138 58 14 1 22 79 48 104 1.80e-26 105
MS.gene84740.t1 MTR_4g089095 74.138 58 14 1 22 79 14 70 2.26e-26 103
MS.gene84740.t1 MTR_3g435480 69.492 59 18 0 19 77 131 189 5.91e-26 106
MS.gene84740.t1 MTR_4g082060 64.062 64 23 0 19 82 117 180 2.40e-25 104
MS.gene84740.t1 MTR_4g109980 77.358 53 12 0 22 74 38 90 3.95e-25 102
MS.gene84740.t1 MTR_7g010950 67.797 59 19 0 19 77 130 188 4.70e-25 103
MS.gene84740.t1 MTR_2g059540 81.633 49 9 0 24 72 31 79 5.86e-25 99.0
MS.gene84740.t1 MTR_7g086780 61.905 63 24 0 19 81 94 156 7.43e-25 102
MS.gene84740.t1 MTR_6g027450 60.317 63 25 0 19 81 84 146 7.86e-25 101
MS.gene84740.t1 MTR_2g014170 79.592 49 10 0 24 72 45 93 1.62e-24 100
MS.gene84740.t1 MTR_2g016030 63.636 66 22 1 12 77 37 100 1.69e-24 96.3
MS.gene84740.t1 MTR_8g044220 61.290 62 24 0 19 80 113 174 2.57e-24 101
MS.gene84740.t1 MTR_6g027460 53.947 76 35 0 19 94 91 166 3.82e-24 100
MS.gene84740.t1 MTR_6g012450 66.102 59 20 0 19 77 131 189 4.02e-24 101
MS.gene84740.t1 MTR_5g041420 62.712 59 22 0 19 77 133 191 2.81e-23 97.1
MS.gene84740.t1 MTR_5g041530 66.667 54 18 0 24 77 140 193 3.59e-21 92.0
MS.gene84740.t1 MTR_5g041380 56.250 64 28 0 14 77 117 180 1.25e-20 90.5
MS.gene84740.t1 MTR_5g041400 56.250 64 28 0 14 77 109 172 1.28e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84740.t1 AT3G61850 52.158 278 87 19 16 266 54 312 6.62e-67 210
MS.gene84740.t1 AT3G61850 52.158 278 87 19 16 266 66 324 9.37e-67 210
MS.gene84740.t1 AT3G61850 49.813 267 82 16 16 266 54 284 1.26e-64 204
MS.gene84740.t1 AT3G61850 49.813 267 82 16 16 266 54 284 1.26e-64 204
MS.gene84740.t1 AT3G61850 49.813 267 82 16 16 266 66 296 1.76e-64 204
MS.gene84740.t1 AT2G46590 43.408 311 105 13 15 266 59 357 1.80e-56 185
MS.gene84740.t1 AT2G46590 43.408 311 105 13 15 266 71 369 2.36e-56 185
MS.gene84740.t1 AT4G24060 39.228 311 123 15 13 266 40 341 4.98e-44 152
MS.gene84740.t1 AT4G00940 37.652 247 127 7 18 261 62 284 1.89e-40 142
MS.gene84740.t1 AT4G00940 37.652 247 127 7 18 261 62 284 1.89e-40 142
MS.gene84740.t1 AT4G00940 37.652 247 127 7 18 261 62 284 1.89e-40 142
MS.gene84740.t1 AT1G64620 37.143 315 126 11 10 261 33 338 1.35e-38 138
MS.gene84740.t1 AT5G60200 48.780 123 57 2 10 130 41 159 5.83e-33 121
MS.gene84740.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.30e-31 119
MS.gene84740.t1 AT3G55370 73.529 68 18 0 11 78 108 175 1.53e-31 120
MS.gene84740.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.57e-31 119
MS.gene84740.t1 AT2G28510 55.357 112 46 2 22 130 46 156 2.13e-31 118
MS.gene84740.t1 AT3G45610 60.494 81 30 1 16 96 32 110 7.47e-30 112
MS.gene84740.t1 AT2G37590 75.410 61 15 0 18 78 83 143 8.22e-30 114
MS.gene84740.t1 AT1G51700 75.862 58 14 0 21 78 30 87 1.98e-29 110
MS.gene84740.t1 AT5G65590 64.935 77 23 1 18 94 35 107 2.04e-29 113
MS.gene84740.t1 AT3G52440 82.456 57 10 0 26 82 27 83 1.91e-28 109
MS.gene84740.t1 AT5G66940 74.138 58 15 0 21 78 29 86 1.98e-28 108
MS.gene84740.t1 AT3G52440 82.456 57 10 0 26 82 46 102 2.36e-28 109
MS.gene84740.t1 AT5G02460 67.647 68 22 0 11 78 82 149 2.74e-28 112
MS.gene84740.t1 AT3G50410 74.138 58 15 0 21 78 27 84 3.36e-28 108
MS.gene84740.t1 AT5G60850 58.333 84 30 1 22 105 49 127 1.02e-27 108
MS.gene84740.t1 AT3G21270 53.125 96 24 1 24 98 29 124 1.29e-27 105
MS.gene84740.t1 AT2G28810 68.182 66 20 1 11 75 63 128 1.43e-27 108
MS.gene84740.t1 AT2G28810 68.182 66 20 1 11 75 80 145 2.02e-27 108
MS.gene84740.t1 AT1G07640 78.182 55 12 0 24 78 21 75 2.03e-27 107
MS.gene84740.t1 AT1G07640 78.182 55 12 0 24 78 77 131 2.31e-27 108
MS.gene84740.t1 AT4G38000 64.474 76 24 2 10 83 25 99 2.32e-27 106
MS.gene84740.t1 AT1G07640 78.182 55 12 0 24 78 85 139 2.74e-27 108
MS.gene84740.t1 AT1G28310 75.000 56 14 0 24 79 27 82 3.36e-27 107
MS.gene84740.t1 AT1G21340 71.212 66 16 1 16 78 27 92 3.59e-27 106
MS.gene84740.t1 AT1G28310 75.000 56 14 0 24 79 51 106 5.28e-27 107
MS.gene84740.t1 AT1G69570 70.312 64 19 0 19 82 127 190 1.72e-26 107
MS.gene84740.t1 AT5G62940 85.714 49 7 0 26 74 75 123 4.87e-26 105
MS.gene84740.t1 AT4G21050 68.852 61 19 0 19 79 19 79 9.17e-26 101
MS.gene84740.t1 AT1G29160 61.765 68 26 0 10 77 48 115 1.06e-25 100
MS.gene84740.t1 AT2G34140 58.108 74 31 0 4 77 38 111 1.11e-25 99.8
MS.gene84740.t1 AT1G47655 76.923 52 12 0 22 73 27 78 2.90e-25 99.8
MS.gene84740.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.02e-25 103
MS.gene84740.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.02e-25 103
MS.gene84740.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.02e-25 103
MS.gene84740.t1 AT3G47500 66.102 59 20 0 19 77 105 163 3.54e-24 100
MS.gene84740.t1 AT5G62430 64.407 59 21 0 19 77 49 107 4.31e-24 99.0
MS.gene84740.t1 AT1G26790 66.102 59 20 0 19 77 106 164 7.08e-24 99.4
MS.gene84740.t1 AT4G21040 75.000 52 13 0 26 77 27 78 1.04e-23 96.3
MS.gene84740.t1 AT4G21080 71.154 52 15 0 26 77 27 78 1.35e-22 93.6
MS.gene84740.t1 AT4G21030 58.000 50 21 0 26 75 23 72 2.79e-13 67.4

Find 63 sgRNAs with CRISPR-Local

Find 70 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCCTTGGACATGAATT+AGG 0.232687 8.4:-69650992 None:intergenic
AAGGAAATTCAACTGGATAT+TGG 0.307009 8.4:+69651725 MS.gene84740:CDS
TCAAATGCTATTTATCCATC+TGG 0.339522 8.4:+69651511 MS.gene84740:CDS
GGATAAATAGCATTTGAGTT+TGG 0.376465 8.4:-69651505 None:intergenic
GAATTATTGTTATTAGCATA+AGG 0.380378 8.4:-69651475 None:intergenic
TTCTTCTCTAGTCCTTGCCT+TGG 0.384640 8.4:-69651004 None:intergenic
CATGTCTTGCAAAAGTATCT+TGG 0.386535 8.4:-69651115 None:intergenic
GCAAGACATGTAGAAGGTAT+TGG 0.389030 8.4:+69651128 MS.gene84740:CDS
ATGAAAGATGTGAAACTTGT+AGG 0.415991 8.4:-69651276 None:intergenic
AATTATTGTTATTAGCATAA+GGG 0.416837 8.4:-69651474 None:intergenic
CTTCAGCTCTTGACCTACTT+AGG 0.419947 8.4:+69651425 MS.gene84740:CDS
CTTGTAGGGTTGGTGGATTT+AGG 0.422116 8.4:-69651261 None:intergenic
AGGGTTGGTGGATTTAGGTC+AGG 0.429516 8.4:-69651256 None:intergenic
GATCAACAAGGAAATTCAAC+TGG 0.430255 8.4:+69651718 MS.gene84740:CDS
GGACAATTTATTTGCTCTTG+TGG 0.430301 8.4:-69651034 None:intergenic
TTTCTTGAACCACCTCCAAC+AGG 0.434621 8.4:-69651178 None:intergenic
CAAGAAGGTGGTGGTGGTGG+TGG 0.441828 8.4:+69651619 MS.gene84740:CDS
GAAAAGCTAGGTTAAGATCT+TGG 0.443847 8.4:-69651324 None:intergenic
CAAGAAGTTAAACCTAGTCT+TGG 0.453651 8.4:+69651544 MS.gene84740:CDS
TATTATTAACATCTCCAAAT+GGG 0.464550 8.4:-69651654 None:intergenic
TTATTATTAACATCTCCAAA+TGG 0.464816 8.4:-69651655 None:intergenic
CTAAGAAATGTTCCTGTTGG+AGG 0.487652 8.4:+69651166 MS.gene84740:CDS
GTTATGCATCTCAACATATG+AGG 0.495564 8.4:-69651386 None:intergenic
GTTCAAGAAGGTGGTGGTGG+TGG 0.497320 8.4:+69651616 MS.gene84740:CDS
GAAAACTATCATCATAATCA+TGG 0.499028 8.4:+69651355 MS.gene84740:CDS
TGTGAAACTTGTAGGGTTGG+TGG 0.499794 8.4:-69651268 None:intergenic
TGGATATTGGAATGGAATGA+TGG 0.500493 8.4:+69651738 MS.gene84740:CDS
TCTCTAAGAAATGTTCCTGT+TGG 0.507663 8.4:+69651163 MS.gene84740:CDS
TTCTACAAGTGGTGTTGAAG+TGG 0.514078 8.4:+69651684 MS.gene84740:CDS
AGAAATGTTCCTGTTGGAGG+TGG 0.521904 8.4:+69651169 MS.gene84740:CDS
ACTAGGTTTAACTTCTTGCA+TGG 0.527857 8.4:-69651539 None:intergenic
TGATGAACTATTATTAGGTG+TGG 0.533433 8.4:-69651227 None:intergenic
TGTAGAAGGTATTGGACTGA+AGG 0.537478 8.4:+69651136 MS.gene84740:CDS
AATTCAACTGGATATTGGAA+TGG 0.543811 8.4:+69651730 MS.gene84740:CDS
TTAGGTGTGGCTAATGATGA+AGG 0.550310 8.4:-69651214 None:intergenic
TATAGGTATATACTCATGGA+AGG 0.550898 8.4:+69650962 None:intergenic
AATAAACAGCTTTCTACAAG+TGG 0.552575 8.4:+69651673 MS.gene84740:CDS
GAATGATGGGTGAAGGATCA+TGG 0.555879 8.4:+69651752 MS.gene84740:CDS
TTTCCATAGATGGAAAAGCT+AGG 0.562893 8.4:-69651336 None:intergenic
ATGCCATGCTTGACCTAAGT+AGG 0.567095 8.4:-69651438 None:intergenic
TCAATTGAAAATCCAAGACT+AGG 0.576773 8.4:-69651556 None:intergenic
TCTTGCATGGTGAATCCAGA+TGG 0.582527 8.4:-69651526 None:intergenic
CAAGTTCAAGAAGGTGGTGG+TGG 0.585887 8.4:+69651613 MS.gene84740:CDS
AGATGTGAAACTTGTAGGGT+TGG 0.588666 8.4:-69651271 None:intergenic
TGAAAGATGTGAAACTTGTA+GGG 0.592727 8.4:-69651275 None:intergenic
TGCATCTCAACATATGAGGA+TGG 0.597529 8.4:-69651382 None:intergenic
TCTCAAAACCCTAAAATACA+AGG 0.599552 8.4:+69651298 MS.gene84740:CDS
AAGGACTAGAGAAGAAAGCA+AGG 0.601557 8.4:+69651011 MS.gene84740:CDS
TGGAATGGAATGATGGGTGA+AGG 0.602503 8.4:+69651745 MS.gene84740:CDS
GGATATTGGAATGGAATGAT+GGG 0.607936 8.4:+69651739 MS.gene84740:CDS
AAGAGCAAATAAATTGTCCA+AGG 0.610950 8.4:+69651038 MS.gene84740:CDS
GATCATGTTCAAGTTCAAGA+AGG 0.611680 8.4:+69651604 MS.gene84740:CDS
TAGCTCCTAATTCATGTCCA+AGG 0.613211 8.4:+69650987 MS.gene84740:CDS
CCTAATTCATGTCCAAGGCA+AGG 0.618735 8.4:+69650992 MS.gene84740:CDS
AGAAGGTATTGGACTGAAGG+AGG 0.618740 8.4:+69651139 MS.gene84740:CDS
GTTCAAGTTCAAGAAGGTGG+TGG 0.620240 8.4:+69651610 MS.gene84740:CDS
AGGTCAAGCATGGCATCTAG+AGG 0.626491 8.4:+69651445 MS.gene84740:CDS
CATGTTCAAGTTCAAGAAGG+TGG 0.629706 8.4:+69651607 MS.gene84740:CDS
GTGTTTGTTGAATTGCACCT+TGG 0.631036 8.4:-69651055 None:intergenic
TGACCTACTTAGGTCAAGCA+TGG 0.637135 8.4:+69651435 MS.gene84740:CDS
ATAGGTATATACTCATGGAA+GGG 0.653687 8.4:+69650963 None:intergenic
CAAAACCCTAAAATACAAGG+AGG 0.720797 8.4:+69651301 MS.gene84740:CDS
GAACACAATAAAGATCAACA+AGG 0.746748 8.4:+69651706 MS.gene84740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATTGTTATTAGCATAA+GGG - chr8.4:69651477-69651496 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG - chr8.4:69651235-69651254 None:intergenic 15.0%
!! TATTATTAACATCTCCAAAT+GGG - chr8.4:69651657-69651676 None:intergenic 20.0%
!! TTATTATTAACATCTCCAAA+TGG - chr8.4:69651658-69651677 None:intergenic 20.0%
!!! GAATTATTGTTATTAGCATA+AGG - chr8.4:69651478-69651497 None:intergenic 20.0%
!!! TTTTCAATTGATGGAATTAA+TGG + chr8.4:69651568-69651587 MS.gene84740:CDS 20.0%
! GAAAACTATCATCATAATCA+TGG + chr8.4:69651355-69651374 MS.gene84740:CDS 25.0%
AAGAGCAAATAAATTGTCCA+AGG + chr8.4:69651038-69651057 MS.gene84740:CDS 30.0%
AAGGAAATTCAACTGGATAT+TGG + chr8.4:69651725-69651744 MS.gene84740:CDS 30.0%
AATAAACAGCTTTCTACAAG+TGG + chr8.4:69651673-69651692 MS.gene84740:CDS 30.0%
AATTCAACTGGATATTGGAA+TGG + chr8.4:69651730-69651749 MS.gene84740:CDS 30.0%
ATGAAAGATGTGAAACTTGT+AGG - chr8.4:69651279-69651298 None:intergenic 30.0%
GAACACAATAAAGATCAACA+AGG + chr8.4:69651706-69651725 MS.gene84740:CDS 30.0%
TCAATTGAAAATCCAAGACT+AGG - chr8.4:69651559-69651578 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG + chr8.4:69651298-69651317 MS.gene84740:CDS 30.0%
TGAAAGATGTGAAACTTGTA+GGG - chr8.4:69651278-69651297 None:intergenic 30.0%
TGATGAACTATTATTAGGTG+TGG - chr8.4:69651230-69651249 None:intergenic 30.0%
! AGTCTTGGATTTTCAATTGA+TGG + chr8.4:69651559-69651578 MS.gene84740:CDS 30.0%
! GGATAAATAGCATTTGAGTT+TGG - chr8.4:69651508-69651527 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG + chr8.4:69651511-69651530 MS.gene84740:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG - chr8.4:69651349-69651368 None:intergenic 30.0%
CAAAACCCTAAAATACAAGG+AGG + chr8.4:69651301-69651320 MS.gene84740:CDS 35.0%
CAAGAAGTTAAACCTAGTCT+TGG + chr8.4:69651544-69651563 MS.gene84740:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG - chr8.4:69651327-69651346 None:intergenic 35.0%
GATCAACAAGGAAATTCAAC+TGG + chr8.4:69651718-69651737 MS.gene84740:CDS 35.0%
GGACAATTTATTTGCTCTTG+TGG - chr8.4:69651037-69651056 None:intergenic 35.0%
GGATATTGGAATGGAATGAT+GGG + chr8.4:69651739-69651758 MS.gene84740:CDS 35.0%
GTTATGCATCTCAACATATG+AGG - chr8.4:69651389-69651408 None:intergenic 35.0%
TGGATATTGGAATGGAATGA+TGG + chr8.4:69651738-69651757 MS.gene84740:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG - chr8.4:69651339-69651358 None:intergenic 35.0%
! ACTAGGTTTAACTTCTTGCA+TGG - chr8.4:69651542-69651561 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG + chr8.4:69651122-69651141 MS.gene84740:CDS 35.0%
! GATCATGTTCAAGTTCAAGA+AGG + chr8.4:69651604-69651623 MS.gene84740:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG + chr8.4:69651163-69651182 MS.gene84740:CDS 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG - chr8.4:69651118-69651137 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG + chr8.4:69651333-69651352 MS.gene84740:CDS 35.0%
AAGGACTAGAGAAGAAAGCA+AGG + chr8.4:69651011-69651030 MS.gene84740:CDS 40.0%
AGATGTGAAACTTGTAGGGT+TGG - chr8.4:69651274-69651293 None:intergenic 40.0%
CTAAGAAATGTTCCTGTTGG+AGG + chr8.4:69651166-69651185 MS.gene84740:CDS 40.0%
TAGCTCCTAATTCATGTCCA+AGG + chr8.4:69650987-69651006 MS.gene84740:CDS 40.0%
TGCATCTCAACATATGAGGA+TGG - chr8.4:69651385-69651404 None:intergenic 40.0%
TTAGGTGTGGCTAATGATGA+AGG - chr8.4:69651217-69651236 None:intergenic 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG + chr8.4:69651607-69651626 MS.gene84740:CDS 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG - chr8.4:69651309-69651328 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG + chr8.4:69651128-69651147 MS.gene84740:CDS 40.0%
! GGAAGACTTTTGTTCCCATT+TGG + chr8.4:69651640-69651659 MS.gene84740:CDS 40.0%
! GTGTTTGTTGAATTGCACCT+TGG - chr8.4:69651058-69651077 None:intergenic 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG - chr8.4:69651310-69651329 None:intergenic 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG + chr8.4:69651684-69651703 MS.gene84740:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr8.4:69651136-69651155 MS.gene84740:CDS 40.0%
AGAAATGTTCCTGTTGGAGG+TGG + chr8.4:69651169-69651188 MS.gene84740:CDS 45.0%
ATGCCATGCTTGACCTAAGT+AGG - chr8.4:69651441-69651460 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG + chr8.4:69650992-69651011 MS.gene84740:CDS 45.0%
CCTTGCCTTGGACATGAATT+AGG - chr8.4:69650995-69651014 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG + chr8.4:69651425-69651444 MS.gene84740:CDS 45.0%
TCTTGCATGGTGAATCCAGA+TGG - chr8.4:69651529-69651548 None:intergenic 45.0%
TGACCTACTTAGGTCAAGCA+TGG + chr8.4:69651435-69651454 MS.gene84740:CDS 45.0%
TGTGAAACTTGTAGGGTTGG+TGG - chr8.4:69651271-69651290 None:intergenic 45.0%
TTCTTCTCTAGTCCTTGCCT+TGG - chr8.4:69651007-69651026 None:intergenic 45.0%
TTTCTTGAACCACCTCCAAC+AGG - chr8.4:69651181-69651200 None:intergenic 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG + chr8.4:69651610-69651629 MS.gene84740:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG + chr8.4:69651139-69651158 MS.gene84740:CDS 45.0%
!! CTTGTAGGGTTGGTGGATTT+AGG - chr8.4:69651264-69651283 None:intergenic 45.0%
!! GAATGATGGGTGAAGGATCA+TGG + chr8.4:69651752-69651771 MS.gene84740:CDS 45.0%
!! TGGAATGGAATGATGGGTGA+AGG + chr8.4:69651745-69651764 MS.gene84740:CDS 45.0%
AGGTCAAGCATGGCATCTAG+AGG + chr8.4:69651445-69651464 MS.gene84740:CDS 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG + chr8.4:69651613-69651632 MS.gene84740:CDS 50.0%
!! AGGGTTGGTGGATTTAGGTC+AGG - chr8.4:69651259-69651278 None:intergenic 50.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG + chr8.4:69651616-69651635 MS.gene84740:CDS 55.0%
!! CAAGAAGGTGGTGGTGGTGG+TGG + chr8.4:69651619-69651638 MS.gene84740:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 69650977 69651777 69650977 ID=MS.gene84740
chr8.4 mRNA 69650977 69651777 69650977 ID=MS.gene84740.t1;Parent=MS.gene84740
chr8.4 exon 69650977 69651777 69650977 ID=MS.gene84740.t1.exon1;Parent=MS.gene84740.t1
chr8.4 CDS 69650977 69651777 69650977 ID=cds.MS.gene84740.t1;Parent=MS.gene84740.t1
Gene Sequence

>MS.gene84740

ATGGAAGGGTTAGCTCCTAATTCATGTCCAAGGCAAGGACTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACAAACACAAAATTTTGCTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCTTCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAACAATAATTCTTTGATGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAAGTTAAACCTAGTCTTGGATTTTCAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTTCAAGAAGGTGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA
Protein sequence

>MS.gene84740.t1

MEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNSLMPNSNAIYPSGFTMQEVKPSLGFSIDGINGNRSYDHVQVQEGGGGGGRLLFPFGDVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW