Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84787.t1 | RZB80688.1 | 71 | 490 | 135 | 3 | 1 | 483 | 150 | 639 | 1.60E-196 | 695.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84787.t1 | P08770 | 34.9 | 501 | 297 | 9 | 1 | 487 | 302 | 787 | 6.5e-82 | 306.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84787.t1 | A0A445I3K4 | 71.0 | 490 | 135 | 3 | 1 | 483 | 150 | 639 | 1.1e-196 | 695.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051125 | MS.gene84787 | 0.831908 | 1.28E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84787.t1 | AT3G42170 | 34.396 | 439 | 273 | 6 | 10 | 444 | 225 | 652 | 6.45e-86 | 278 |
| MS.gene84787.t1 | AT3G42170 | 34.396 | 439 | 273 | 6 | 10 | 444 | 247 | 674 | 1.04e-85 | 278 |
| MS.gene84787.t1 | AT1G18560 | 23.529 | 459 | 297 | 14 | 11 | 444 | 220 | 649 | 2.90e-24 | 107 |
Find 78 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCTTCACTCTTCAAAA+TGG | 0.177755 | 6.3:+48887806 | None:intergenic |
| CATTTCTTTAATCAAATTAT+TGG | 0.241200 | 6.3:+48888708 | None:intergenic |
| AACGGAGTTGGATCATTATC+TGG | 0.259746 | 6.3:-48888368 | MS.gene84787:CDS |
| TGCAGAAATTTGATAAATAT+TGG | 0.280085 | 6.3:-48888672 | MS.gene84787:CDS |
| CCACATCAGAATATCAAAAT+TGG | 0.289304 | 6.3:+48888321 | None:intergenic |
| CGAGATTTGTAAGATCAAAT+TGG | 0.290931 | 6.3:-48888755 | MS.gene84787:CDS |
| TTTGGATCCAAGATACAAAA+TGG | 0.298966 | 6.3:-48888614 | MS.gene84787:CDS |
| TATTTAAATGTTTACTTGAA+TGG | 0.313417 | 6.3:-48889305 | MS.gene84787:CDS |
| GATGGGAGTTGCTACTGTTT+TGG | 0.320873 | 6.3:-48888632 | MS.gene84787:CDS |
| TCAGAAGCTACTGAAGTAAT+AGG | 0.323940 | 6.3:+48888235 | None:intergenic |
| CACATTATATTGATGGATCT+TGG | 0.325892 | 6.3:-48889495 | MS.gene84787:CDS |
| ACTGGACTGCAACTCCTAAA+AGG | 0.326823 | 6.3:-48889065 | MS.gene84787:CDS |
| ATTTGTACTACAATTATCTA+AGG | 0.330397 | 6.3:+48889254 | None:intergenic |
| CAATAATTTGATTAAAGAAA+TGG | 0.336226 | 6.3:-48888707 | MS.gene84787:CDS |
| TTCGAGATAGTGTAGCTTAC+TGG | 0.340671 | 6.3:-48889083 | MS.gene84787:CDS |
| ATATCAAAATTGGCACTTCT+AGG | 0.340733 | 6.3:+48888331 | None:intergenic |
| TGCTATGATTGACAAAATTA+AGG | 0.352231 | 6.3:-48889229 | MS.gene84787:CDS |
| GTTTAGACTGTCCAACTAGA+TGG | 0.363378 | 6.3:-48888984 | MS.gene84787:CDS |
| GTTACTGCACATTATATTGA+TGG | 0.379284 | 6.3:-48889502 | MS.gene84787:CDS |
| CAATTTGATCTTACAAATCT+CGG | 0.381654 | 6.3:+48888756 | None:intergenic |
| TTTGCAATTTCTTGCAATGT+TGG | 0.382104 | 6.3:+48888274 | None:intergenic |
| AACTTCCATTGTTGACTAGT+TGG | 0.391643 | 6.3:+48888871 | None:intergenic |
| AAAGGATGTTTGTGAAAGAT+TGG | 0.407988 | 6.3:-48888845 | MS.gene84787:CDS |
| AAGATCTTACATTCATCATC+AGG | 0.417940 | 6.3:+48887935 | None:intergenic |
| AGTATCACTGAACTCATATC+TGG | 0.426833 | 6.3:-48888811 | MS.gene84787:CDS |
| TCAGCTTCACTCTTCAAAAT+GGG | 0.432393 | 6.3:+48887807 | None:intergenic |
| TACGTGGAGTTCCATCTAGT+TGG | 0.446126 | 6.3:+48888973 | None:intergenic |
| CCATCCCTCAACAAAGTACT+TGG | 0.453316 | 6.3:+48889195 | None:intergenic |
| TAGCAACTCCCATCATATCC+TGG | 0.454437 | 6.3:+48888641 | None:intergenic |
| GCTAATTCTGTGGCTAATGA+TGG | 0.459373 | 6.3:-48888451 | MS.gene84787:CDS |
| CGCATCGTAGTCGACTTCAT+TGG | 0.461536 | 6.3:-48888177 | MS.gene84787:CDS |
| TATATTAAATTTGATAGTAA+AGG | 0.462368 | 6.3:-48889142 | MS.gene84787:CDS |
| CTATGGAGCAAGGAGAATAA+TGG | 0.470206 | 6.3:-48888118 | MS.gene84787:intron |
| TCAAATTGGCAATATCTGAT+TGG | 0.473321 | 6.3:-48888741 | MS.gene84787:CDS |
| TAAAAGGAAGGAAAGATTTG+AGG | 0.473646 | 6.3:-48889049 | MS.gene84787:CDS |
| ACTCTGTTGAGCAAGTTAAG+AGG | 0.474739 | 6.3:-48888552 | MS.gene84787:CDS |
| GAGTGTCACCCAGGATATGA+TGG | 0.476745 | 6.3:-48888650 | MS.gene84787:CDS |
| GTTTAGAAGTGGTGAAGGAT+GGG | 0.483405 | 6.3:-48889116 | MS.gene84787:CDS |
| AATTTGATCTTACAAATCTC+GGG | 0.487617 | 6.3:+48888757 | None:intergenic |
| GGTTTAGAAGTGGTGAAGGA+TGG | 0.490057 | 6.3:-48889117 | MS.gene84787:CDS |
| TAGAACATCATTATATAAAA+CGG | 0.495038 | 6.3:-48888386 | MS.gene84787:CDS |
| TAAAGAAATGGCTACGAAGA+TGG | 0.497673 | 6.3:-48888695 | MS.gene84787:CDS |
| ATCATTATATAAAACGGAGT+TGG | 0.499119 | 6.3:-48888380 | MS.gene84787:CDS |
| TGAGCCAAGTACTTTGTTGA+GGG | 0.500136 | 6.3:-48889199 | MS.gene84787:CDS |
| ATTATGATGCATATGTCAAA+AGG | 0.500853 | 6.3:-48888420 | MS.gene84787:CDS |
| TTCTTTAATCAAATTATTGG+AGG | 0.501683 | 6.3:+48888711 | None:intergenic |
| CTATCACTTGAATGAGGAGC+AGG | 0.508504 | 6.3:+48889342 | None:intergenic |
| CTTTGATGTGTGCTAGAAGT+TGG | 0.519354 | 6.3:-48888141 | MS.gene84787:CDS |
| CCAAGTACTTTGTTGAGGGA+TGG | 0.521479 | 6.3:-48889195 | MS.gene84787:CDS |
| ACTTCATTGGACAACCTTGG+AGG | 0.521822 | 6.3:-48888164 | MS.gene84787:CDS |
| ACATCAGACATGTGGACCTC+AGG | 0.522328 | 6.3:-48889550 | None:intergenic |
| TTAAATTTGATAGTAAAGGA+TGG | 0.523395 | 6.3:-48889138 | MS.gene84787:CDS |
| GAATCAGCATTCAGTACAAG+TGG | 0.537506 | 6.3:-48888214 | MS.gene84787:CDS |
| TCGACTTCATTGGACAACCT+TGG | 0.544964 | 6.3:-48888167 | MS.gene84787:CDS |
| AGCAACTCCCATCATATCCT+GGG | 0.551068 | 6.3:+48888642 | None:intergenic |
| TTGAGCCAAGTACTTTGTTG+AGG | 0.552495 | 6.3:-48889200 | MS.gene84787:CDS |
| TGGTGAAGGATGGGATTGAG+AGG | 0.561512 | 6.3:-48889107 | MS.gene84787:CDS |
| TAAATATTGGAGTGTCACCC+AGG | 0.565226 | 6.3:-48888659 | MS.gene84787:CDS |
| GGATGGTTTAGAAGTGGTGA+AGG | 0.569501 | 6.3:-48889121 | MS.gene84787:CDS |
| ACGGAGTTGGATCATTATCT+GGG | 0.571432 | 6.3:-48888367 | MS.gene84787:CDS |
| CTGATGTGGTGGAAGTTGAA+TGG | 0.578791 | 6.3:-48888307 | MS.gene84787:CDS |
| ATTTACAGAGTCGCATCTTG+AGG | 0.580131 | 6.3:-48889471 | MS.gene84787:intron |
| AAGTTCAATCAAGACACTTG+TGG | 0.595420 | 6.3:-48888487 | MS.gene84787:CDS |
| TAGAAGTTGGCTATGGAGCA+AGG | 0.597997 | 6.3:-48888128 | MS.gene84787:CDS |
| GACTGCAACTCCTAAAAGGA+AGG | 0.598534 | 6.3:-48889061 | MS.gene84787:CDS |
| CAAAGTCTATCACTTGAATG+AGG | 0.607514 | 6.3:+48889336 | None:intergenic |
| AGACACTTGTGGTGAATCGT+CGG | 0.609844 | 6.3:-48888476 | MS.gene84787:CDS |
| AGTAAAGGATGGTTTAGAAG+TGG | 0.611534 | 6.3:-48889127 | MS.gene84787:CDS |
| AGTGTCACCCAGGATATGAT+GGG | 0.628166 | 6.3:-48888649 | MS.gene84787:CDS |
| AGCACACATCAAAGCCTCCA+AGG | 0.630649 | 6.3:+48888150 | None:intergenic |
| TCAACAATGGAAGTTTGCAA+AGG | 0.637204 | 6.3:-48888863 | MS.gene84787:CDS |
| TGTGTGCTAGAAGTTGGCTA+TGG | 0.638996 | 6.3:-48888135 | MS.gene84787:CDS |
| ATAGGTGAAATATTGACTAG+TGG | 0.646439 | 6.3:-48887838 | MS.gene84787:intron |
| CCTCGTACAAAATAGCTATG+TGG | 0.651628 | 6.3:+48888941 | None:intergenic |
| GTGTTCCAACTAGTCAACAA+TGG | 0.688204 | 6.3:-48888876 | MS.gene84787:CDS |
| ATCGTCGGAAGCTAATTCTG+TGG | 0.696219 | 6.3:-48888461 | MS.gene84787:CDS |
| CAATGAAGTCGACTACGATG+CGG | 0.735270 | 6.3:+48888178 | None:intergenic |
| TATGTGGAGCATCTTATACG+TGG | 0.757438 | 6.3:+48888957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTGTATTTTTTATTATAT+AGG | - | chr6.3:48889498-48889517 | MS.gene84787:CDS | 10.0% |
| !!! | TATATTAAATTTGATAGTAA+AGG | - | chr6.3:48888212-48888231 | MS.gene84787:CDS | 10.0% |
| !! | AAACATTAAAGTTAGTAAAT+TGG | + | chr6.3:48889470-48889489 | None:intergenic | 15.0% |
| !! | CAATAATTTGATTAAAGAAA+TGG | - | chr6.3:48888647-48888666 | MS.gene84787:CDS | 15.0% |
| !! | CATTTCTTTAATCAAATTAT+TGG | + | chr6.3:48888649-48888668 | None:intergenic | 15.0% |
| !! | TAGAACATCATTATATAAAA+CGG | - | chr6.3:48888968-48888987 | MS.gene84787:CDS | 15.0% |
| !! | TATTTAAATGTTTACTTGAA+TGG | - | chr6.3:48888049-48888068 | MS.gene84787:intron | 15.0% |
| !!! | TACTATTTTGAAAAATTGTA+TGG | - | chr6.3:48888774-48888793 | MS.gene84787:CDS | 15.0% |
| !! | ATTAAAGTTAGTAAATTGGA+AGG | + | chr6.3:48889466-48889485 | None:intergenic | 20.0% |
| !! | ATTTGTACTACAATTATCTA+AGG | + | chr6.3:48888103-48888122 | None:intergenic | 20.0% |
| !! | TATGAATCTTATTACTTGTT+AGG | - | chr6.3:48887977-48887996 | MS.gene84787:CDS | 20.0% |
| !! | TGCAGAAATTTGATAAATAT+TGG | - | chr6.3:48888682-48888701 | MS.gene84787:CDS | 20.0% |
| !! | TTCTTTAATCAAATTATTGG+AGG | + | chr6.3:48888646-48888665 | None:intergenic | 20.0% |
| !!! | TTAAATTTGATAGTAAAGGA+TGG | - | chr6.3:48888216-48888235 | MS.gene84787:CDS | 20.0% |
| ! | AATTTGATCTTACAAATCTC+GGG | + | chr6.3:48888600-48888619 | None:intergenic | 25.0% |
| ! | ATCATTATATAAAACGGAGT+TGG | - | chr6.3:48888974-48888993 | MS.gene84787:CDS | 25.0% |
| ! | ATTATGATGCATATGTCAAA+AGG | - | chr6.3:48888934-48888953 | MS.gene84787:CDS | 25.0% |
| ! | CAATTTGATCTTACAAATCT+CGG | + | chr6.3:48888601-48888620 | None:intergenic | 25.0% |
| ! | CTTTCAATTTACATATCTTG+AGG | - | chr6.3:48889273-48889292 | MS.gene84787:CDS | 25.0% |
| ! | GGAAGGTAGTATTAAATAAA+TGG | + | chr6.3:48889449-48889468 | None:intergenic | 25.0% |
| ! | TGCTATGATTGACAAAATTA+AGG | - | chr6.3:48888125-48888144 | MS.gene84787:CDS | 25.0% |
| !! | TAATCAAAAAAAGGGGTATA+TGG | - | chr6.3:48887827-48887846 | MS.gene84787:CDS | 25.0% |
| AAAGGATGTTTGTGAAAGAT+TGG | - | chr6.3:48888509-48888528 | MS.gene84787:CDS | 30.0% | |
| AAGATCTTACATTCATCATC+AGG | + | chr6.3:48889422-48889441 | None:intergenic | 30.0% | |
| AATCTCGGGAAAAAACATAT+TGG | + | chr6.3:48888586-48888605 | None:intergenic | 30.0% | |
| ACCTCAGGTAATCAAAAAAA+GGG | - | chr6.3:48887819-48887838 | MS.gene84787:CDS | 30.0% | |
| ACTGCATTTGCATTATTTAC+AGG | - | chr6.3:48889341-48889360 | MS.gene84787:CDS | 30.0% | |
| ATATCAAAATTGGCACTTCT+AGG | + | chr6.3:48889026-48889045 | None:intergenic | 30.0% | |
| CCACATCAGAATATCAAAAT+TGG | + | chr6.3:48889036-48889055 | None:intergenic | 30.0% | |
| CGAGATTTGTAAGATCAAAT+TGG | - | chr6.3:48888599-48888618 | MS.gene84787:CDS | 30.0% | |
| GTTACTGCACATTATATTGA+TGG | - | chr6.3:48887852-48887871 | MS.gene84787:intron | 30.0% | |
| TAAAAGGAAGGAAAGATTTG+AGG | - | chr6.3:48888305-48888324 | MS.gene84787:CDS | 30.0% | |
| TCAAATTGGCAATATCTGAT+TGG | - | chr6.3:48888613-48888632 | MS.gene84787:CDS | 30.0% | |
| TTTGCAATTTCTTGCAATGT+TGG | + | chr6.3:48889083-48889102 | None:intergenic | 30.0% | |
| TTTGGATCCAAGATACAAAA+TGG | - | chr6.3:48888740-48888759 | MS.gene84787:CDS | 30.0% | |
| ! | AGGATGTATTTTCTAGATTG+AGG | - | chr6.3:48888433-48888452 | MS.gene84787:CDS | 30.0% |
| ! | ATAGGTGAAATATTGACTAG+TGG | - | chr6.3:48889516-48889535 | MS.gene84787:CDS | 30.0% |
| ! | CACATTATATTGATGGATCT+TGG | - | chr6.3:48887859-48887878 | MS.gene84787:intron | 30.0% |
| ! | TCAAATCTTTCCTTCCTTTT+AGG | + | chr6.3:48888306-48888325 | None:intergenic | 30.0% |
| !! | ATTTTGATATTCTGATGTGG+TGG | - | chr6.3:48889036-48889055 | MS.gene84787:CDS | 30.0% |
| !! | CCAATTTTGATATTCTGATG+TGG | - | chr6.3:48889033-48889052 | MS.gene84787:CDS | 30.0% |
| AAGTTCAATCAAGACACTTG+TGG | - | chr6.3:48888867-48888886 | MS.gene84787:CDS | 35.0% | |
| AGTAAAGGATGGTTTAGAAG+TGG | - | chr6.3:48888227-48888246 | MS.gene84787:CDS | 35.0% | |
| AGTATCACTGAACTCATATC+TGG | - | chr6.3:48888543-48888562 | MS.gene84787:CDS | 35.0% | |
| CAAAGTCTATCACTTGAATG+AGG | + | chr6.3:48888021-48888040 | None:intergenic | 35.0% | |
| CCTCAGGTAATCAAAAAAAG+GGG | - | chr6.3:48887820-48887839 | MS.gene84787:CDS | 35.0% | |
| GACCTCAGGTAATCAAAAAA+AGG | - | chr6.3:48887818-48887837 | MS.gene84787:CDS | 35.0% | |
| GGAAAAAACATATTGGCAGT+AGG | + | chr6.3:48888579-48888598 | None:intergenic | 35.0% | |
| TAAAGAAATGGCTACGAAGA+TGG | - | chr6.3:48888659-48888678 | MS.gene84787:CDS | 35.0% | |
| TCAACAATGGAAGTTTGCAA+AGG | - | chr6.3:48888491-48888510 | MS.gene84787:CDS | 35.0% | |
| TCAGAAGCTACTGAAGTAAT+AGG | + | chr6.3:48889122-48889141 | None:intergenic | 35.0% | |
| ! | AACTTCCATTGTTGACTAGT+TGG | + | chr6.3:48888486-48888505 | None:intergenic | 35.0% |
| ! | AGCAACTCCATTTTGTATCT+TGG | + | chr6.3:48888750-48888769 | None:intergenic | 35.0% |
| AACGGAGTTGGATCATTATC+TGG | - | chr6.3:48888986-48889005 | MS.gene84787:CDS | 40.0% | |
| ACGGAGTTGGATCATTATCT+GGG | - | chr6.3:48888987-48889006 | MS.gene84787:CDS | 40.0% | |
| ACTCTGTTGAGCAAGTTAAG+AGG | - | chr6.3:48888802-48888821 | MS.gene84787:CDS | 40.0% | |
| ATTTACAGAGTCGCATCTTG+AGG | - | chr6.3:48887883-48887902 | MS.gene84787:intron | 40.0% | |
| CCTCGTACAAAATAGCTATG+TGG | + | chr6.3:48888416-48888435 | None:intergenic | 40.0% | |
| CTATGGAGCAAGGAGAATAA+TGG | - | chr6.3:48889236-48889255 | MS.gene84787:CDS | 40.0% | |
| CTTTGATGTGTGCTAGAAGT+TGG | - | chr6.3:48889213-48889232 | MS.gene84787:CDS | 40.0% | |
| GAATCAGCATTCAGTACAAG+TGG | - | chr6.3:48889140-48889159 | MS.gene84787:CDS | 40.0% | |
| GCTAATTCTGTGGCTAATGA+TGG | - | chr6.3:48888903-48888922 | MS.gene84787:CDS | 40.0% | |
| GTGTTCCAACTAGTCAACAA+TGG | - | chr6.3:48888478-48888497 | MS.gene84787:CDS | 40.0% | |
| GTTTAGAAGTGGTGAAGGAT+GGG | - | chr6.3:48888238-48888257 | MS.gene84787:CDS | 40.0% | |
| GTTTAGACTGTCCAACTAGA+TGG | - | chr6.3:48888370-48888389 | MS.gene84787:CDS | 40.0% | |
| TGAGCCAAGTACTTTGTTGA+GGG | - | chr6.3:48888155-48888174 | MS.gene84787:CDS | 40.0% | |
| TTCGAGATAGTGTAGCTTAC+TGG | - | chr6.3:48888271-48888290 | MS.gene84787:CDS | 40.0% | |
| TTGAGCCAAGTACTTTGTTG+AGG | - | chr6.3:48888154-48888173 | MS.gene84787:CDS | 40.0% | |
| ! | TAAATATTGGAGTGTCACCC+AGG | - | chr6.3:48888695-48888714 | MS.gene84787:CDS | 40.0% |
| ! | TATGTGGAGCATCTTATACG+TGG | + | chr6.3:48888400-48888419 | None:intergenic | 40.0% |
| !! | CCACATAGCTATTTTGTACG+AGG | - | chr6.3:48888413-48888432 | MS.gene84787:CDS | 40.0% |
| !!! | CCCCTTTTTTTGATTACCTG+AGG | + | chr6.3:48887823-48887842 | None:intergenic | 40.0% |
| ACTGGACTGCAACTCCTAAA+AGG | - | chr6.3:48888289-48888308 | MS.gene84787:CDS | 45.0% | |
| ACTTCATTGGACAACCTTGG+AGG | - | chr6.3:48889190-48889209 | MS.gene84787:CDS | 45.0% | |
| AGACACTTGTGGTGAATCGT+CGG | - | chr6.3:48888878-48888897 | MS.gene84787:CDS | 45.0% | |
| AGCAACTCCCATCATATCCT+GGG | + | chr6.3:48888715-48888734 | None:intergenic | 45.0% | |
| AGTGTCACCCAGGATATGAT+GGG | - | chr6.3:48888705-48888724 | MS.gene84787:CDS | 45.0% | |
| ATCGTCGGAAGCTAATTCTG+TGG | - | chr6.3:48888893-48888912 | MS.gene84787:CDS | 45.0% | |
| CAATGAAGTCGACTACGATG+CGG | + | chr6.3:48889179-48889198 | None:intergenic | 45.0% | |
| CCAAGTACTTTGTTGAGGGA+TGG | - | chr6.3:48888159-48888178 | MS.gene84787:CDS | 45.0% | |
| CTATCACTTGAATGAGGAGC+AGG | + | chr6.3:48888015-48888034 | None:intergenic | 45.0% | |
| GACTGCAACTCCTAAAAGGA+AGG | - | chr6.3:48888293-48888312 | MS.gene84787:CDS | 45.0% | |
| GGATGGTTTAGAAGTGGTGA+AGG | - | chr6.3:48888233-48888252 | MS.gene84787:CDS | 45.0% | |
| GGTTTAGAAGTGGTGAAGGA+TGG | - | chr6.3:48888237-48888256 | MS.gene84787:CDS | 45.0% | |
| TACGTGGAGTTCCATCTAGT+TGG | + | chr6.3:48888384-48888403 | None:intergenic | 45.0% | |
| TAGAAGTTGGCTATGGAGCA+AGG | - | chr6.3:48889226-48889245 | MS.gene84787:CDS | 45.0% | |
| TAGCAACTCCCATCATATCC+TGG | + | chr6.3:48888716-48888735 | None:intergenic | 45.0% | |
| TCGACTTCATTGGACAACCT+TGG | - | chr6.3:48889187-48889206 | MS.gene84787:CDS | 45.0% | |
| TGTGTGCTAGAAGTTGGCTA+TGG | - | chr6.3:48889219-48889238 | MS.gene84787:CDS | 45.0% | |
| ! | CCATCCCTCAACAAAGTACT+TGG | + | chr6.3:48888162-48888181 | None:intergenic | 45.0% |
| ! | CTGATGTGGTGGAAGTTGAA+TGG | - | chr6.3:48889047-48889066 | MS.gene84787:CDS | 45.0% |
| ! | GATGGGAGTTGCTACTGTTT+TGG | - | chr6.3:48888722-48888741 | MS.gene84787:CDS | 45.0% |
| AGCACACATCAAAGCCTCCA+AGG | + | chr6.3:48889207-48889226 | None:intergenic | 50.0% | |
| GAGTGTCACCCAGGATATGA+TGG | - | chr6.3:48888704-48888723 | MS.gene84787:CDS | 50.0% | |
| TGGTGAAGGATGGGATTGAG+AGG | - | chr6.3:48888247-48888266 | MS.gene84787:CDS | 50.0% | |
| ! | CGCATCGTAGTCGACTTCAT+TGG | - | chr6.3:48889177-48889196 | MS.gene84787:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 48887813 | 48889563 | 48887813 | ID=MS.gene84787 |
| chr6.3 | mRNA | 48887813 | 48889563 | 48887813 | ID=MS.gene84787.t1;Parent=MS.gene84787 |
| chr6.3 | exon | 48889472 | 48889563 | 48889472 | ID=MS.gene84787.t1.exon1;Parent=MS.gene84787.t1 |
| chr6.3 | CDS | 48889472 | 48889563 | 48889472 | ID=cds.MS.gene84787.t1;Parent=MS.gene84787.t1 |
| chr6.3 | exon | 48888119 | 48889377 | 48888119 | ID=MS.gene84787.t1.exon2;Parent=MS.gene84787.t1 |
| chr6.3 | CDS | 48888119 | 48889377 | 48888119 | ID=cds.MS.gene84787.t1;Parent=MS.gene84787.t1 |
| chr6.3 | exon | 48887945 | 48888013 | 48887945 | ID=MS.gene84787.t1.exon3;Parent=MS.gene84787.t1 |
| chr6.3 | CDS | 48887945 | 48888013 | 48887945 | ID=cds.MS.gene84787.t1;Parent=MS.gene84787.t1 |
| chr6.3 | exon | 48887813 | 48887856 | 48887813 | ID=MS.gene84787.t1.exon4;Parent=MS.gene84787.t1 |
| chr6.3 | CDS | 48887813 | 48887856 | 48887813 | ID=cds.MS.gene84787.t1;Parent=MS.gene84787.t1 |
| Gene Sequence |
| Protein sequence |
