Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85017.t1 | XP_013455351.1 | 96 | 202 | 6 | 1 | 1 | 200 | 1 | 202 | 1.90E-100 | 375.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85017.t1 | Q38841 | 60.5 | 210 | 72 | 4 | 1 | 199 | 1 | 210 | 4.4e-61 | 235.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85017.t1 | A0A072UIB8 | 96.0 | 202 | 6 | 1 | 1 | 200 | 1 | 202 | 1.4e-100 | 375.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene85017.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052606 | MS.gene85017 | 0.814168 | 1.77E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85017.t1 | MTR_4g036050 | 96.040 | 202 | 6 | 1 | 1 | 200 | 1 | 202 | 3.71e-142 | 394 |
MS.gene85017.t1 | MTR_4g036050 | 89.109 | 202 | 6 | 2 | 1 | 200 | 1 | 188 | 1.67e-127 | 357 |
MS.gene85017.t1 | MTR_4g036050 | 89.109 | 202 | 6 | 2 | 1 | 200 | 1 | 188 | 4.12e-127 | 356 |
MS.gene85017.t1 | MTR_4g036050 | 82.178 | 202 | 6 | 2 | 1 | 200 | 1 | 174 | 4.35e-114 | 322 |
MS.gene85017.t1 | MTR_7g075870 | 47.619 | 168 | 87 | 1 | 1 | 167 | 1 | 168 | 1.70e-45 | 150 |
MS.gene85017.t1 | MTR_7g075870 | 47.619 | 168 | 86 | 2 | 1 | 167 | 1 | 167 | 9.42e-44 | 145 |
MS.gene85017.t1 | MTR_8g033220 | 45.087 | 173 | 88 | 3 | 1 | 169 | 1 | 170 | 1.05e-42 | 143 |
MS.gene85017.t1 | MTR_8g033220 | 45.087 | 173 | 88 | 3 | 1 | 169 | 1 | 170 | 1.49e-42 | 143 |
MS.gene85017.t1 | MTR_3g452380 | 40.609 | 197 | 109 | 4 | 1 | 190 | 16 | 211 | 5.58e-42 | 142 |
MS.gene85017.t1 | MTR_8g097090 | 44.318 | 176 | 94 | 2 | 1 | 173 | 1 | 175 | 1.23e-40 | 138 |
MS.gene85017.t1 | MTR_8g066260 | 42.262 | 168 | 96 | 1 | 1 | 167 | 1 | 168 | 1.67e-40 | 138 |
MS.gene85017.t1 | MTR_7g075850 | 47.024 | 168 | 88 | 1 | 1 | 167 | 1 | 168 | 3.71e-40 | 137 |
MS.gene85017.t1 | MTR_7g016600 | 44.643 | 168 | 91 | 2 | 1 | 167 | 1 | 167 | 5.21e-39 | 134 |
MS.gene85017.t1 | MTR_3g084980 | 44.118 | 170 | 91 | 2 | 1 | 167 | 1 | 169 | 1.39e-38 | 133 |
MS.gene85017.t1 | MTR_5g046790 | 39.779 | 181 | 102 | 2 | 1 | 177 | 1 | 178 | 2.22e-38 | 131 |
MS.gene85017.t1 | MTR_8g033270 | 44.970 | 169 | 91 | 2 | 1 | 168 | 1 | 168 | 8.22e-38 | 131 |
MS.gene85017.t1 | MTR_6g015975 | 44.048 | 168 | 92 | 2 | 1 | 167 | 1 | 167 | 3.20e-37 | 130 |
MS.gene85017.t1 | MTR_4g109830 | 41.071 | 168 | 98 | 1 | 1 | 167 | 1 | 168 | 4.16e-37 | 129 |
MS.gene85017.t1 | MTR_4g102530 | 44.253 | 174 | 83 | 5 | 1 | 167 | 1 | 167 | 1.61e-36 | 126 |
MS.gene85017.t1 | MTR_2g017865 | 40.805 | 174 | 101 | 2 | 1 | 173 | 16 | 188 | 2.28e-36 | 128 |
MS.gene85017.t1 | MTR_2g009890 | 43.103 | 174 | 95 | 2 | 1 | 171 | 1 | 173 | 7.28e-36 | 127 |
MS.gene85017.t1 | MTR_3g005530 | 41.818 | 165 | 94 | 2 | 1 | 164 | 1 | 164 | 7.87e-36 | 125 |
MS.gene85017.t1 | MTR_5g031000 | 39.524 | 210 | 112 | 5 | 1 | 200 | 1 | 205 | 1.14e-35 | 125 |
MS.gene85017.t1 | MTR_4g109810 | 42.515 | 167 | 95 | 1 | 1 | 167 | 1 | 166 | 1.43e-35 | 125 |
MS.gene85017.t1 | MTR_5g031000 | 39.216 | 204 | 118 | 3 | 1 | 200 | 1 | 202 | 2.00e-35 | 125 |
MS.gene85017.t1 | MTR_8g087860 | 37.778 | 180 | 110 | 2 | 1 | 179 | 17 | 195 | 8.84e-35 | 123 |
MS.gene85017.t1 | MTR_1g038300 | 35.961 | 203 | 121 | 3 | 1 | 194 | 1 | 203 | 1.14e-33 | 120 |
MS.gene85017.t1 | MTR_7g016630 | 38.922 | 167 | 101 | 1 | 1 | 167 | 1 | 166 | 3.01e-33 | 119 |
MS.gene85017.t1 | MTR_5g066180 | 42.105 | 171 | 89 | 4 | 1 | 167 | 1 | 165 | 5.55e-32 | 115 |
MS.gene85017.t1 | MTR_6g464720 | 38.889 | 180 | 100 | 3 | 1 | 174 | 1 | 176 | 6.30e-32 | 116 |
MS.gene85017.t1 | MTR_3g088615 | 40.000 | 145 | 84 | 2 | 1 | 145 | 1 | 142 | 6.48e-31 | 111 |
MS.gene85017.t1 | MTR_1g053070 | 36.316 | 190 | 113 | 4 | 1 | 183 | 1 | 189 | 5.46e-30 | 111 |
MS.gene85017.t1 | MTR_1g101970 | 37.870 | 169 | 102 | 2 | 1 | 167 | 1 | 168 | 2.46e-29 | 107 |
MS.gene85017.t1 | MTR_0003s0590 | 38.235 | 170 | 101 | 2 | 1 | 167 | 1 | 169 | 7.38e-28 | 105 |
MS.gene85017.t1 | MTR_5g046870 | 51.961 | 102 | 41 | 2 | 1 | 94 | 1 | 102 | 9.16e-28 | 101 |
MS.gene85017.t1 | MTR_4g093970 | 36.782 | 174 | 106 | 2 | 1 | 171 | 27 | 199 | 1.10e-27 | 105 |
MS.gene85017.t1 | MTR_1g029670 | 37.671 | 146 | 86 | 2 | 1 | 145 | 1 | 142 | 3.81e-27 | 102 |
MS.gene85017.t1 | MTR_3g113030 | 35.465 | 172 | 105 | 4 | 1 | 170 | 1 | 168 | 9.49e-27 | 102 |
MS.gene85017.t1 | MTR_5g032520 | 39.181 | 171 | 96 | 4 | 1 | 167 | 1 | 167 | 4.89e-25 | 97.8 |
MS.gene85017.t1 | MTR_5g032150 | 38.596 | 171 | 97 | 4 | 1 | 167 | 1 | 167 | 1.05e-23 | 94.4 |
MS.gene85017.t1 | MTR_2g461710 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 5.84e-23 | 87.8 |
MS.gene85017.t1 | MTR_5g021270 | 33.333 | 168 | 105 | 3 | 1 | 164 | 1 | 165 | 8.08e-23 | 92.0 |
MS.gene85017.t1 | MTR_5g021270 | 33.333 | 168 | 105 | 3 | 1 | 164 | 1 | 165 | 8.09e-23 | 92.0 |
MS.gene85017.t1 | MTR_5g066960 | 66.102 | 59 | 20 | 0 | 1 | 59 | 1 | 59 | 3.82e-22 | 85.5 |
MS.gene85017.t1 | MTR_4g093030 | 50.575 | 87 | 28 | 1 | 1 | 72 | 1 | 87 | 3.46e-21 | 85.9 |
MS.gene85017.t1 | MTR_1g041615 | 40.206 | 97 | 53 | 1 | 16 | 107 | 20 | 116 | 1.75e-17 | 75.5 |
MS.gene85017.t1 | MTR_3g102570 | 46.575 | 73 | 39 | 0 | 1 | 73 | 1 | 73 | 2.88e-17 | 78.6 |
MS.gene85017.t1 | MTR_4g084740 | 42.169 | 83 | 48 | 0 | 1 | 83 | 1 | 83 | 3.73e-17 | 78.6 |
MS.gene85017.t1 | MTR_2g093190 | 28.111 | 217 | 122 | 6 | 2 | 200 | 9 | 209 | 9.85e-17 | 75.9 |
MS.gene85017.t1 | MTR_8g079502 | 36.538 | 104 | 55 | 2 | 1 | 104 | 1 | 93 | 4.99e-15 | 70.1 |
MS.gene85017.t1 | MTR_1g063160 | 39.583 | 96 | 55 | 2 | 1 | 96 | 1 | 93 | 5.00e-15 | 70.1 |
MS.gene85017.t1 | MTR_8g051580 | 56.364 | 55 | 24 | 0 | 1 | 55 | 1 | 55 | 5.95e-15 | 70.1 |
MS.gene85017.t1 | MTR_1g047550 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 9.79e-14 | 66.6 |
MS.gene85017.t1 | MTR_3g030770 | 29.730 | 185 | 105 | 7 | 2 | 168 | 9 | 186 | 2.47e-13 | 66.6 |
MS.gene85017.t1 | MTR_4g131030 | 44.444 | 72 | 39 | 1 | 1 | 72 | 1 | 71 | 2.74e-13 | 66.2 |
MS.gene85017.t1 | MTR_1g054265 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 2.84e-13 | 65.5 |
MS.gene85017.t1 | MTR_1g108510 | 29.730 | 185 | 105 | 7 | 2 | 168 | 9 | 186 | 3.51e-13 | 66.2 |
MS.gene85017.t1 | MTR_4g094632 | 31.148 | 122 | 80 | 2 | 1 | 122 | 1 | 118 | 5.20e-13 | 64.3 |
MS.gene85017.t1 | MTR_4g094638 | 40.845 | 71 | 41 | 1 | 1 | 71 | 1 | 70 | 1.28e-12 | 63.5 |
MS.gene85017.t1 | MTR_1g108580 | 26.484 | 219 | 123 | 6 | 2 | 200 | 9 | 209 | 1.72e-12 | 64.3 |
MS.gene85017.t1 | MTR_4g108720 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 2.55e-12 | 64.7 |
MS.gene85017.t1 | MTR_2g105290 | 35.632 | 87 | 55 | 1 | 1 | 87 | 11 | 96 | 2.77e-12 | 62.8 |
MS.gene85017.t1 | MTR_8g043650 | 27.632 | 152 | 85 | 4 | 2 | 132 | 9 | 156 | 2.91e-12 | 63.9 |
MS.gene85017.t1 | MTR_5g045560 | 36.905 | 84 | 51 | 2 | 1 | 84 | 8 | 89 | 3.45e-12 | 63.5 |
MS.gene85017.t1 | MTR_8g086290 | 38.356 | 73 | 44 | 1 | 2 | 74 | 12 | 83 | 3.57e-12 | 62.4 |
MS.gene85017.t1 | MTR_3g052920 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 3.76e-12 | 63.5 |
MS.gene85017.t1 | MTR_1g106070 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 4.33e-12 | 62.4 |
MS.gene85017.t1 | MTR_3g080940 | 34.375 | 96 | 59 | 2 | 1 | 96 | 8 | 99 | 4.65e-12 | 62.8 |
MS.gene85017.t1 | MTR_2g030740 | 42.029 | 69 | 39 | 1 | 3 | 71 | 10 | 77 | 5.99e-12 | 62.8 |
MS.gene85017.t1 | MTR_1g105910 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 6.82e-12 | 62.8 |
MS.gene85017.t1 | MTR_1g105920 | 27.000 | 200 | 127 | 7 | 2 | 194 | 9 | 196 | 7.32e-12 | 62.8 |
MS.gene85017.t1 | MTR_2g085280 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.09e-11 | 62.0 |
MS.gene85017.t1 | MTR_2g085250 | 41.429 | 70 | 40 | 1 | 2 | 71 | 9 | 77 | 1.19e-11 | 62.0 |
MS.gene85017.t1 | MTR_8g046350 | 40.278 | 72 | 42 | 1 | 1 | 72 | 1 | 71 | 1.36e-11 | 60.5 |
MS.gene85017.t1 | MTR_3g052870 | 30.147 | 136 | 79 | 4 | 2 | 125 | 9 | 140 | 1.37e-11 | 61.6 |
MS.gene85017.t1 | MTR_1g077360 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 1.74e-11 | 61.6 |
MS.gene85017.t1 | MTR_1g012570 | 40.000 | 70 | 41 | 1 | 2 | 71 | 9 | 77 | 2.35e-11 | 61.2 |
MS.gene85017.t1 | MTR_5g041650 | 38.542 | 96 | 54 | 3 | 1 | 94 | 38 | 130 | 2.56e-11 | 62.0 |
MS.gene85017.t1 | MTR_7g028448 | 29.545 | 132 | 87 | 4 | 16 | 145 | 26 | 153 | 4.19e-11 | 59.3 |
MS.gene85017.t1 | MTR_4g036915 | 29.545 | 132 | 87 | 4 | 16 | 145 | 26 | 153 | 4.19e-11 | 59.3 |
MS.gene85017.t1 | MTR_8g033250 | 30.822 | 146 | 85 | 4 | 67 | 198 | 8 | 151 | 9.68e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene85017.t1 | AT1G71692 | 60.190 | 211 | 73 | 4 | 1 | 200 | 1 | 211 | 8.45e-77 | 229 |
MS.gene85017.t1 | AT3G58780 | 44.253 | 174 | 95 | 2 | 1 | 173 | 16 | 188 | 3.05e-42 | 142 |
MS.gene85017.t1 | AT2G42830 | 43.750 | 176 | 97 | 2 | 1 | 175 | 16 | 190 | 3.48e-42 | 142 |
MS.gene85017.t1 | AT3G58780 | 44.253 | 174 | 95 | 2 | 1 | 173 | 22 | 194 | 3.98e-42 | 142 |
MS.gene85017.t1 | AT2G45660 | 45.349 | 172 | 88 | 3 | 1 | 169 | 1 | 169 | 9.11e-42 | 140 |
MS.gene85017.t1 | AT2G42830 | 44.382 | 178 | 95 | 3 | 1 | 175 | 16 | 192 | 6.11e-41 | 139 |
MS.gene85017.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 1 | 173 | 6.32e-40 | 136 |
MS.gene85017.t1 | AT2G45660 | 45.912 | 159 | 80 | 3 | 1 | 156 | 1 | 156 | 7.26e-40 | 134 |
MS.gene85017.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 2 | 174 | 7.71e-40 | 136 |
MS.gene85017.t1 | AT1G24260 | 43.605 | 172 | 92 | 2 | 1 | 168 | 1 | 171 | 8.16e-40 | 136 |
MS.gene85017.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 11 | 183 | 9.68e-40 | 136 |
MS.gene85017.t1 | AT1G24260 | 43.353 | 173 | 92 | 2 | 1 | 168 | 1 | 172 | 1.07e-39 | 136 |
MS.gene85017.t1 | AT1G69120 | 40.331 | 181 | 101 | 2 | 1 | 177 | 1 | 178 | 1.27e-39 | 135 |
MS.gene85017.t1 | AT4G09960 | 42.529 | 174 | 98 | 2 | 1 | 173 | 27 | 199 | 1.85e-39 | 135 |
MS.gene85017.t1 | AT1G69120 | 40.331 | 181 | 101 | 2 | 1 | 177 | 1 | 178 | 3.42e-39 | 135 |
MS.gene85017.t1 | AT3G58780 | 42.529 | 174 | 91 | 2 | 1 | 173 | 16 | 181 | 2.02e-38 | 132 |
MS.gene85017.t1 | AT4G18960 | 41.379 | 174 | 100 | 2 | 2 | 174 | 18 | 190 | 2.03e-38 | 133 |
MS.gene85017.t1 | AT3G58780 | 38.889 | 198 | 96 | 2 | 1 | 173 | 16 | 213 | 4.13e-38 | 132 |
MS.gene85017.t1 | AT4G09960 | 41.279 | 172 | 99 | 2 | 1 | 171 | 1 | 171 | 5.04e-38 | 130 |
MS.gene85017.t1 | AT3G58780 | 47.917 | 144 | 73 | 2 | 1 | 143 | 16 | 158 | 8.00e-38 | 132 |
MS.gene85017.t1 | AT1G26310 | 37.569 | 181 | 108 | 2 | 1 | 177 | 1 | 180 | 1.05e-37 | 131 |
MS.gene85017.t1 | AT1G24260 | 43.478 | 161 | 85 | 2 | 1 | 156 | 1 | 160 | 1.47e-37 | 130 |
MS.gene85017.t1 | AT2G45650 | 44.444 | 171 | 86 | 3 | 1 | 167 | 1 | 166 | 1.65e-37 | 130 |
MS.gene85017.t1 | AT4G22950 | 40.936 | 171 | 100 | 1 | 1 | 171 | 1 | 170 | 1.26e-36 | 126 |
MS.gene85017.t1 | AT4G09960 | 41.573 | 178 | 98 | 3 | 1 | 173 | 96 | 272 | 3.74e-36 | 129 |
MS.gene85017.t1 | AT5G60910 | 40.351 | 171 | 95 | 2 | 1 | 167 | 1 | 168 | 3.97e-36 | 127 |
MS.gene85017.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 4.92e-36 | 125 |
MS.gene85017.t1 | AT3G02310 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 7.11e-36 | 125 |
MS.gene85017.t1 | AT4G11880 | 41.026 | 156 | 92 | 0 | 1 | 156 | 1 | 156 | 8.96e-36 | 124 |
MS.gene85017.t1 | AT4G11880 | 41.026 | 156 | 92 | 0 | 1 | 156 | 1 | 156 | 8.96e-36 | 124 |
MS.gene85017.t1 | AT5G15800 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 9.97e-36 | 126 |
MS.gene85017.t1 | AT5G15800 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 1.42e-35 | 125 |
MS.gene85017.t1 | AT4G22950 | 40.449 | 178 | 105 | 1 | 1 | 178 | 1 | 177 | 1.46e-35 | 124 |
MS.gene85017.t1 | AT4G22950 | 40.449 | 178 | 105 | 1 | 1 | 178 | 1 | 177 | 1.46e-35 | 124 |
MS.gene85017.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 3.52e-35 | 125 |
MS.gene85017.t1 | AT2G03710 | 42.857 | 168 | 95 | 1 | 1 | 167 | 1 | 168 | 4.44e-35 | 124 |
MS.gene85017.t1 | AT4G37940 | 40.606 | 165 | 95 | 3 | 1 | 164 | 1 | 163 | 5.17e-35 | 123 |
MS.gene85017.t1 | AT3G02310 | 43.452 | 168 | 94 | 1 | 1 | 167 | 1 | 168 | 5.58e-35 | 124 |
MS.gene85017.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 2.91e-34 | 121 |
MS.gene85017.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 2.91e-34 | 121 |
MS.gene85017.t1 | AT5G62165 | 39.645 | 169 | 100 | 2 | 1 | 168 | 1 | 168 | 2.91e-34 | 121 |
MS.gene85017.t1 | AT5G13790 | 36.364 | 209 | 117 | 3 | 1 | 200 | 1 | 202 | 7.46e-34 | 121 |
MS.gene85017.t1 | AT3G57230 | 41.250 | 160 | 92 | 2 | 1 | 160 | 1 | 158 | 1.03e-33 | 120 |
MS.gene85017.t1 | AT3G57230 | 41.250 | 160 | 92 | 2 | 1 | 160 | 1 | 158 | 1.03e-33 | 120 |
MS.gene85017.t1 | AT4G11880 | 41.916 | 167 | 97 | 0 | 1 | 167 | 1 | 167 | 1.80e-33 | 119 |
MS.gene85017.t1 | AT4G11880 | 41.916 | 167 | 97 | 0 | 1 | 167 | 1 | 167 | 1.80e-33 | 119 |
MS.gene85017.t1 | AT5G13790 | 37.143 | 210 | 117 | 5 | 1 | 200 | 1 | 205 | 1.89e-33 | 120 |
MS.gene85017.t1 | AT4G37940 | 42.000 | 150 | 84 | 3 | 1 | 149 | 1 | 148 | 3.36e-33 | 118 |
MS.gene85017.t1 | AT5G23260 | 37.234 | 188 | 115 | 2 | 1 | 187 | 1 | 186 | 4.54e-33 | 119 |
MS.gene85017.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 6.94e-33 | 116 |
MS.gene85017.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 6.94e-33 | 116 |
MS.gene85017.t1 | AT5G62165 | 39.490 | 157 | 93 | 2 | 1 | 156 | 1 | 156 | 6.94e-33 | 116 |
MS.gene85017.t1 | AT5G23260 | 37.313 | 201 | 122 | 3 | 1 | 200 | 17 | 214 | 7.30e-33 | 119 |
MS.gene85017.t1 | AT3G61120 | 42.262 | 168 | 93 | 3 | 1 | 167 | 1 | 165 | 1.22e-32 | 117 |
MS.gene85017.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 2.03e-32 | 114 |
MS.gene85017.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 2.03e-32 | 114 |
MS.gene85017.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 2.03e-32 | 114 |
MS.gene85017.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 2.03e-32 | 114 |
MS.gene85017.t1 | AT5G62165 | 41.497 | 147 | 84 | 2 | 1 | 146 | 1 | 146 | 2.03e-32 | 114 |
MS.gene85017.t1 | AT3G30260 | 40.789 | 152 | 87 | 2 | 1 | 150 | 1 | 151 | 2.24e-32 | 117 |
MS.gene85017.t1 | AT2G14210 | 41.860 | 172 | 98 | 2 | 1 | 171 | 1 | 171 | 9.16e-32 | 115 |
MS.gene85017.t1 | AT2G14210 | 41.860 | 172 | 98 | 2 | 1 | 171 | 1 | 171 | 9.79e-32 | 115 |
MS.gene85017.t1 | AT4G37940 | 41.216 | 148 | 84 | 3 | 1 | 147 | 1 | 146 | 2.39e-31 | 112 |
MS.gene85017.t1 | AT3G57230 | 41.259 | 143 | 83 | 1 | 1 | 143 | 1 | 142 | 2.75e-31 | 111 |
MS.gene85017.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 1 | 168 | 6.85e-31 | 112 |
MS.gene85017.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 1 | 168 | 1.05e-30 | 112 |
MS.gene85017.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.74e-30 | 111 |
MS.gene85017.t1 | AT5G62165 | 41.958 | 143 | 81 | 2 | 1 | 142 | 1 | 142 | 1.74e-30 | 111 |
MS.gene85017.t1 | AT5G51870 | 37.427 | 171 | 100 | 3 | 1 | 167 | 11 | 178 | 1.84e-30 | 112 |
MS.gene85017.t1 | AT5G23260 | 36.816 | 201 | 118 | 4 | 1 | 200 | 17 | 209 | 8.02e-30 | 111 |
MS.gene85017.t1 | AT5G51860 | 37.349 | 166 | 95 | 3 | 1 | 161 | 1 | 162 | 2.26e-29 | 108 |
MS.gene85017.t1 | AT5G51860 | 37.349 | 166 | 95 | 3 | 1 | 161 | 1 | 162 | 2.64e-29 | 108 |
MS.gene85017.t1 | AT5G51870 | 38.667 | 150 | 85 | 3 | 1 | 146 | 1 | 147 | 6.96e-29 | 106 |
MS.gene85017.t1 | AT5G23260 | 40.000 | 150 | 87 | 2 | 1 | 149 | 1 | 148 | 1.36e-28 | 107 |
MS.gene85017.t1 | AT5G51870 | 38.667 | 150 | 85 | 3 | 1 | 146 | 24 | 170 | 1.55e-28 | 105 |
MS.gene85017.t1 | AT2G22630 | 36.970 | 165 | 101 | 3 | 1 | 164 | 1 | 163 | 5.87e-28 | 105 |
MS.gene85017.t1 | AT2G22630 | 36.970 | 165 | 101 | 3 | 1 | 164 | 1 | 163 | 5.87e-28 | 105 |
MS.gene85017.t1 | AT3G57390 | 35.196 | 179 | 107 | 2 | 1 | 171 | 1 | 178 | 2.58e-26 | 101 |
MS.gene85017.t1 | AT3G57390 | 35.196 | 179 | 107 | 2 | 1 | 171 | 1 | 178 | 4.24e-26 | 101 |
MS.gene85017.t1 | AT5G20240 | 36.054 | 147 | 89 | 2 | 1 | 146 | 1 | 143 | 1.17e-25 | 99.0 |
MS.gene85017.t1 | AT5G62165 | 58.667 | 75 | 30 | 1 | 1 | 75 | 1 | 74 | 1.49e-25 | 95.9 |
MS.gene85017.t1 | AT4G24540 | 37.441 | 211 | 105 | 8 | 1 | 191 | 1 | 204 | 1.57e-25 | 99.0 |
MS.gene85017.t1 | AT2G22540 | 38.596 | 171 | 97 | 4 | 1 | 167 | 1 | 167 | 2.22e-25 | 99.0 |
MS.gene85017.t1 | AT2G22540 | 38.596 | 171 | 97 | 4 | 1 | 167 | 1 | 167 | 2.22e-25 | 99.0 |
MS.gene85017.t1 | AT5G65070 | 34.118 | 170 | 99 | 4 | 1 | 167 | 1 | 160 | 2.28e-25 | 97.8 |
MS.gene85017.t1 | AT5G20240 | 34.932 | 146 | 90 | 2 | 1 | 145 | 1 | 142 | 3.49e-25 | 95.9 |
MS.gene85017.t1 | AT5G65060 | 31.959 | 194 | 115 | 5 | 1 | 191 | 1 | 180 | 2.48e-24 | 95.1 |
MS.gene85017.t1 | AT5G65050 | 33.908 | 174 | 102 | 3 | 1 | 171 | 1 | 164 | 2.89e-24 | 94.4 |
MS.gene85017.t1 | AT2G22540 | 39.521 | 167 | 96 | 3 | 1 | 167 | 1 | 162 | 4.76e-24 | 95.5 |
MS.gene85017.t1 | AT5G65070 | 31.959 | 194 | 102 | 4 | 1 | 167 | 1 | 191 | 9.17e-24 | 94.7 |
MS.gene85017.t1 | AT5G65050 | 33.908 | 174 | 102 | 3 | 1 | 171 | 1 | 164 | 1.03e-23 | 93.6 |
MS.gene85017.t1 | AT5G65060 | 33.529 | 170 | 100 | 4 | 1 | 167 | 1 | 160 | 2.62e-23 | 92.4 |
MS.gene85017.t1 | AT1G31140 | 36.913 | 149 | 91 | 2 | 1 | 146 | 1 | 149 | 7.68e-23 | 91.7 |
MS.gene85017.t1 | AT5G10140 | 32.692 | 156 | 98 | 1 | 1 | 156 | 1 | 149 | 8.11e-23 | 90.9 |
MS.gene85017.t1 | AT3G54340 | 36.313 | 179 | 98 | 6 | 1 | 172 | 1 | 170 | 8.11e-23 | 92.0 |
MS.gene85017.t1 | AT1G31140 | 36.735 | 147 | 92 | 1 | 1 | 146 | 1 | 147 | 9.09e-23 | 91.7 |
MS.gene85017.t1 | AT5G65080 | 32.317 | 164 | 98 | 4 | 1 | 161 | 8 | 161 | 1.01e-22 | 90.9 |
MS.gene85017.t1 | AT5G65070 | 34.228 | 149 | 85 | 4 | 1 | 146 | 1 | 139 | 1.48e-22 | 89.4 |
MS.gene85017.t1 | AT5G65070 | 30.693 | 202 | 110 | 4 | 1 | 175 | 1 | 199 | 1.52e-22 | 90.9 |
MS.gene85017.t1 | AT5G65050 | 33.333 | 174 | 92 | 3 | 1 | 171 | 1 | 153 | 1.95e-22 | 90.1 |
MS.gene85017.t1 | AT5G65050 | 34.161 | 161 | 93 | 3 | 1 | 158 | 1 | 151 | 6.43e-22 | 88.6 |
MS.gene85017.t1 | AT5G65060 | 32.584 | 178 | 96 | 4 | 1 | 175 | 1 | 157 | 1.08e-21 | 87.8 |
MS.gene85017.t1 | AT5G10140 | 34.247 | 146 | 89 | 2 | 1 | 146 | 1 | 139 | 1.32e-21 | 87.4 |
MS.gene85017.t1 | AT5G10140 | 33.562 | 146 | 90 | 1 | 1 | 146 | 1 | 139 | 1.83e-21 | 87.4 |
MS.gene85017.t1 | AT5G10140 | 33.562 | 146 | 90 | 1 | 1 | 146 | 1 | 139 | 2.71e-21 | 87.0 |
MS.gene85017.t1 | AT1G77080 | 34.706 | 170 | 98 | 4 | 1 | 167 | 1 | 160 | 6.98e-21 | 85.5 |
MS.gene85017.t1 | AT1G77080 | 34.270 | 178 | 104 | 4 | 1 | 175 | 1 | 168 | 1.11e-20 | 85.5 |
MS.gene85017.t1 | AT1G77080 | 34.706 | 170 | 98 | 4 | 1 | 167 | 1 | 160 | 1.30e-20 | 84.7 |
MS.gene85017.t1 | AT5G65070 | 32.308 | 195 | 101 | 7 | 1 | 167 | 1 | 192 | 3.47e-20 | 85.1 |
MS.gene85017.t1 | AT1G77080 | 30.693 | 202 | 106 | 5 | 1 | 175 | 1 | 195 | 6.32e-19 | 81.6 |
MS.gene85017.t1 | AT1G77080 | 33.146 | 178 | 102 | 5 | 1 | 175 | 1 | 164 | 6.78e-18 | 78.2 |
MS.gene85017.t1 | AT5G65080 | 52.542 | 59 | 28 | 0 | 1 | 59 | 8 | 66 | 4.85e-16 | 73.6 |
MS.gene85017.t1 | AT1G77980 | 44.595 | 74 | 41 | 0 | 1 | 74 | 1 | 74 | 4.85e-16 | 75.5 |
MS.gene85017.t1 | AT1G77080 | 33.333 | 159 | 89 | 5 | 1 | 156 | 1 | 145 | 1.14e-15 | 71.2 |
MS.gene85017.t1 | AT1G22130 | 42.667 | 75 | 43 | 0 | 1 | 75 | 1 | 75 | 1.92e-15 | 73.6 |
MS.gene85017.t1 | AT1G72350 | 47.887 | 71 | 34 | 1 | 2 | 72 | 43 | 110 | 1.18e-14 | 70.1 |
MS.gene85017.t1 | AT4G37435 | 33.333 | 141 | 85 | 4 | 1 | 135 | 1 | 138 | 4.02e-14 | 68.2 |
MS.gene85017.t1 | AT1G77950 | 23.767 | 223 | 120 | 3 | 1 | 182 | 1 | 214 | 1.87e-13 | 67.4 |
MS.gene85017.t1 | AT1G77950 | 23.767 | 223 | 120 | 3 | 1 | 182 | 1 | 214 | 1.87e-13 | 67.4 |
MS.gene85017.t1 | AT1G77950 | 23.767 | 223 | 120 | 3 | 1 | 182 | 1 | 214 | 1.87e-13 | 67.4 |
MS.gene85017.t1 | AT1G77950 | 23.767 | 223 | 120 | 3 | 1 | 182 | 1 | 214 | 1.87e-13 | 67.4 |
MS.gene85017.t1 | AT2G24840 | 42.254 | 71 | 40 | 1 | 1 | 71 | 62 | 131 | 2.67e-13 | 67.0 |
MS.gene85017.t1 | AT2G34440 | 41.667 | 72 | 41 | 1 | 1 | 72 | 1 | 71 | 2.78e-13 | 65.5 |
MS.gene85017.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.11e-12 | 66.2 |
MS.gene85017.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.11e-12 | 66.2 |
MS.gene85017.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.11e-12 | 66.2 |
MS.gene85017.t1 | AT2G03060 | 44.000 | 75 | 41 | 1 | 1 | 74 | 1 | 75 | 1.13e-12 | 66.2 |
MS.gene85017.t1 | AT1G01530 | 48.276 | 58 | 30 | 0 | 1 | 58 | 6 | 63 | 1.28e-12 | 65.1 |
MS.gene85017.t1 | AT3G66656 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 1.75e-12 | 63.5 |
MS.gene85017.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 4.87e-12 | 64.3 |
MS.gene85017.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.45e-12 | 63.9 |
MS.gene85017.t1 | AT1G18750 | 41.333 | 75 | 43 | 1 | 1 | 74 | 1 | 75 | 5.73e-12 | 63.9 |
MS.gene85017.t1 | AT4G36590 | 30.120 | 166 | 93 | 6 | 2 | 155 | 7 | 161 | 6.18e-12 | 63.2 |
MS.gene85017.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.44e-11 | 62.8 |
MS.gene85017.t1 | AT1G69540 | 39.189 | 74 | 45 | 0 | 1 | 74 | 1 | 74 | 1.89e-11 | 62.4 |
Find 48 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTGTTTGGAGGAGGATT+AGG | 0.243362 | 4.2:+68263833 | MS.gene85017:CDS |
CGTGCTTCAGTTACAGCTTC+AGG | 0.305131 | 4.2:-68260003 | None:intergenic |
GTGCTTTGCGATGCTGAAAT+TGG | 0.308388 | 4.2:+68259431 | MS.gene85017:CDS |
TTGAAAAGAACCTCGAAAAC+TGG | 0.326345 | 4.2:+68263885 | MS.gene85017:CDS |
TAACCTTATCCCTCAAAGTT+TGG | 0.340993 | 4.2:-68264089 | None:intergenic |
ATTTGTTTGGAGGAGGATTA+GGG | 0.367328 | 4.2:+68263834 | MS.gene85017:CDS |
AAATAAGTATCTCCATGATT+TGG | 0.377590 | 4.2:+68267265 | MS.gene85017:CDS |
AATCCAAACTTTGAGGGATA+AGG | 0.388651 | 4.2:+68264086 | MS.gene85017:CDS |
ATTATTGGCAGGTATTTGTT+TGG | 0.401347 | 4.2:+68263821 | MS.gene85017:intron |
TGGAGGAGGATTAGGGACTA+TGG | 0.415641 | 4.2:+68263841 | MS.gene85017:CDS |
ATTTAAGGAGGGAACACTTA+AGG | 0.425708 | 4.2:+68267238 | MS.gene85017:intron |
ATGAATATGTTACCAAATCA+TGG | 0.430713 | 4.2:-68267277 | None:intergenic |
GGCAGGTATTTGTTTGGAGG+AGG | 0.434879 | 4.2:+68263827 | MS.gene85017:intron |
TTCCCACTAATTATACAAGA+TGG | 0.434963 | 4.2:+68267449 | MS.gene85017:CDS |
AGAGATCGATACCTTGCAAA+AGG | 0.454575 | 4.2:+68263256 | MS.gene85017:CDS |
ATCCCATCTTGTATAATTAG+TGG | 0.454812 | 4.2:-68267452 | None:intergenic |
CCGAGCGGGGCTTCTGAAGA+AGG | 0.465308 | 4.2:+68259394 | MS.gene85017:CDS |
ACTTTCTGTAAGCGCCGAGC+GGG | 0.485647 | 4.2:+68259380 | MS.gene85017:CDS |
ATTGGCAGGTATTTGTTTGG+AGG | 0.487880 | 4.2:+68263824 | MS.gene85017:intron |
CACAAGAAATCCAAACTTTG+AGG | 0.490472 | 4.2:+68264079 | MS.gene85017:CDS |
CTCTATGAACTCGCCACCAA+AGG | 0.491747 | 4.2:+68259482 | MS.gene85017:CDS |
CTTCTCTATTAGCCCTTGCA+TGG | 0.492434 | 4.2:-68259953 | None:intergenic |
ATACCTTGCAAAAGGGTCTC+AGG | 0.496187 | 4.2:+68263264 | MS.gene85017:CDS |
AAAGTCACTTGCCTATGCAC+TGG | 0.499125 | 4.2:-68259362 | None:intergenic |
AACGAAGTATCAGTAGCAAA+TGG | 0.506323 | 4.2:-68267428 | None:intergenic |
TCCCACTAATTATACAAGAT+GGG | 0.527346 | 4.2:+68267450 | MS.gene85017:CDS |
CCTTCTTCAGAAGCCCCGCT+CGG | 0.527878 | 4.2:-68259394 | None:intergenic |
TTCATAGAGCTTTCCATGAG+CGG | 0.532053 | 4.2:-68259468 | None:intergenic |
ACAAGAAATCCAAACTTTGA+GGG | 0.536382 | 4.2:+68264080 | MS.gene85017:CDS |
GTATAATGTTCGCTCAATGA+AGG | 0.550286 | 4.2:+68263910 | MS.gene85017:CDS |
TCTATGAACTCGCCACCAAA+GGG | 0.554348 | 4.2:+68259483 | MS.gene85017:CDS |
TCCCATCTTGTATAATTAGT+GGG | 0.555246 | 4.2:-68267451 | None:intergenic |
AATCGACATGGCTCGAGGGA+AGG | 0.556037 | 4.2:+68259316 | None:intergenic |
AAGTCACTTGCCTATGCACT+GGG | 0.560730 | 4.2:-68259361 | None:intergenic |
ATGAAATGAAGAACCATGCA+AGG | 0.564040 | 4.2:+68259940 | MS.gene85017:intron |
TCATATCTAGGATGCTAAAG+AGG | 0.576504 | 4.2:+68263214 | MS.gene85017:intron |
GAGATCGATACCTTGCAAAA+GGG | 0.585390 | 4.2:+68263257 | MS.gene85017:CDS |
AGGATTAGGGACTATGGCAA+TGG | 0.589394 | 4.2:+68263847 | MS.gene85017:CDS |
AAAAGAGACATACCCTTTGG+TGG | 0.593726 | 4.2:-68259495 | None:intergenic |
CTCGAGGGAAGGTTCAGCTA+AGG | 0.594828 | 4.2:+68259327 | MS.gene85017:CDS |
GAATTGAGAACCCAGTGCAT+AGG | 0.599037 | 4.2:+68259351 | MS.gene85017:CDS |
GGGGCTTCTGAAGAAGGCTA+AGG | 0.602676 | 4.2:+68259400 | MS.gene85017:CDS |
GATCTCTTGCTTGAGCACAT+TGG | 0.611486 | 4.2:-68263240 | None:intergenic |
CTTTCTGTAAGCGCCGAGCG+GGG | 0.616522 | 4.2:+68259381 | MS.gene85017:CDS |
TGAAATGAAGAACCATGCAA+GGG | 0.639061 | 4.2:+68259941 | MS.gene85017:intron |
GACTTTCTGTAAGCGCCGAG+CGG | 0.650769 | 4.2:+68259379 | MS.gene85017:CDS |
TAAGGAGGGAACACTTAAGG+CGG | 0.674035 | 4.2:+68267241 | MS.gene85017:intron |
AAGTACTTGAAGTTCACACG+AGG | 0.761674 | 4.2:+68259973 | MS.gene85017:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 68259323 | 68267487 | 68259323 | ID=MS.gene85017 |
chr4.2 | mRNA | 68259323 | 68267487 | 68259323 | ID=MS.gene85017.t1;Parent=MS.gene85017 |
chr4.2 | exon | 68259323 | 68259504 | 68259323 | ID=MS.gene85017.t1.exon1;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68259323 | 68259504 | 68259323 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68259951 | 68260032 | 68259951 | ID=MS.gene85017.t1.exon2;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68259951 | 68260032 | 68259951 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68263224 | 68263285 | 68263224 | ID=MS.gene85017.t1.exon3;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68263224 | 68263285 | 68263224 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68263832 | 68263931 | 68263832 | ID=MS.gene85017.t1.exon4;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68263832 | 68263931 | 68263832 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68264066 | 68264107 | 68264066 | ID=MS.gene85017.t1.exon5;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68264066 | 68264107 | 68264066 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68267245 | 68267286 | 68267245 | ID=MS.gene85017.t1.exon6;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68267245 | 68267286 | 68267245 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
chr4.2 | exon | 68267395 | 68267487 | 68267395 | ID=MS.gene85017.t1.exon7;Parent=MS.gene85017.t1 |
chr4.2 | CDS | 68267395 | 68267487 | 68267395 | ID=cds.MS.gene85017.t1;Parent=MS.gene85017.t1 |
Gene Sequence |
Protein sequence |