AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85682

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85682.t1 MTR_6g043620 72.195 205 26 2 793 970 259 459 7.99e-86 283
MS.gene85682.t1 MTR_6g043620 75.258 194 37 4 76 259 259 451 2.55e-82 274
MS.gene85682.t1 MTR_6g043620 83.333 72 12 0 417 488 370 441 5.22e-30 125
MS.gene85682.t1 MTR_6g043630 65.041 246 54 8 31 259 939 1169 1.94e-78 279
MS.gene85682.t1 MTR_6g043630 50.888 338 123 7 658 971 860 1178 1.21e-75 271
MS.gene85682.t1 MTR_6g043630 61.972 142 30 2 283 424 37 154 1.33e-36 150
MS.gene85682.t1 MTR_6g043630 27.987 636 300 20 270 794 105 693 5.93e-27 119
MS.gene85682.t1 MTR_6g043630 33.827 405 161 19 537 896 216 558 4.78e-25 113
MS.gene85682.t1 MTR_6g043630 68.571 70 18 1 423 488 1090 1159 7.57e-19 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 168 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCTTGATTGTCTTCAATT+TGG 0.177815 6.1:-17835712 None:intergenic
CTAGTTTCAACTTCACTTAA+TGG 0.179435 6.1:-17840247 None:intergenic
TCCACGTCTCCAAGTTTATT+TGG 0.182233 6.1:-17834766 None:intergenic
CCAACATCTCCAAGTGTATT+TGG 0.186199 6.1:-17841585 None:intergenic
AACATTCAATTTGTCTTTAT+CGG 0.213725 6.1:-17835783 None:intergenic
GATGGCGTGTCCAACTTCTT+AGG 0.241676 6.1:-17842295 None:intergenic
AACTGATCAATCAACTAAAA+TGG 0.255925 6.1:+17841120 MS.gene85682:CDS
TGTTGGTCCCTTCCGTATTC+AGG 0.268149 6.1:+17840316 MS.gene85682:CDS
TTTGAAGGTTCAACTAATAA+AGG 0.268490 6.1:+17834718 MS.gene85682:CDS
GCCAATCTACTAAACATTTC+AGG 0.272658 6.1:+17840647 MS.gene85682:CDS
GTTGAACCTTCAAAGTCATT+AGG 0.277892 6.1:-17834709 None:intergenic
CTTTCACGATTGATCCTTCA+TGG 0.291266 6.1:-17840796 None:intergenic
GTTGAAGCTTTAACGTCATT+AGG 0.293061 6.1:-17841528 None:intergenic
CAGAAGAGAAGTCGAGCTTC+AGG 0.299308 6.1:+17840605 MS.gene85682:CDS
TGCTTTATAGAAACTGCTTC+TGG 0.299507 6.1:+17837276 MS.gene85682:intron
GATGGTGAGTCCAACCTCTT+AGG 0.301908 6.1:-17837315 None:intergenic
TGATTTATAGAAATTGCTTC+TGG 0.302672 6.1:+17835488 MS.gene85682:intron
TTCACTTCCTCGTCTCCTTC+AGG 0.307179 6.1:-17836736 None:intergenic
TTGAACCTTCAAAGTCATTA+GGG 0.308186 6.1:-17834708 None:intergenic
ATCTTTATAGATACTGTTGC+TGG 0.310162 6.1:+17835978 MS.gene85682:intron
GTTAAAGCTTCAACTAATAA+AGG 0.315147 6.1:+17841537 MS.gene85682:CDS
GGATGATAATAATTATGTTT+TGG 0.318608 6.1:+17840886 MS.gene85682:CDS
TTGAAGCTTTAACGTCATTA+GGG 0.319189 6.1:-17841527 None:intergenic
TGATTTATAGAAACTGCTTC+TGG 0.321178 6.1:+17842256 MS.gene85682:intron
TGATCTTGATGCTCATAAAA+TGG 0.326180 6.1:+17840270 MS.gene85682:CDS
ACCTGAAATGTTTAGTAGAT+TGG 0.339804 6.1:-17840648 None:intergenic
GTCTTTATCGGCGCCTTCAT+CGG 0.353926 6.1:-17835771 None:intergenic
CTTGAATCCATTTCACTAGT+TGG 0.355649 6.1:-17836772 None:intergenic
ATATTCTCTTTATGTATCAT+TGG 0.365816 6.1:-17835560 None:intergenic
CTTGGATCCATTTCACTAGT+TGG 0.367198 6.1:-17834982 None:intergenic
TTCAACTAATAAAGGCTTTG+AGG 0.370501 6.1:+17841545 MS.gene85682:CDS
AGTTGAAGAAGTTCACAAAT+TGG 0.374196 6.1:+17840865 MS.gene85682:CDS
ATGTTCTCTTTATGTATCAT+TGG 0.378307 6.1:-17837348 None:intergenic
ATGTTCTCTTTATGTATCAT+TGG 0.378307 6.1:-17842328 None:intergenic
GATAGAGAAGGAAAACAATC+AGG 0.379914 6.1:+17834828 MS.gene85682:CDS
CATGATTTATTTATGACAAC+TGG 0.384122 6.1:+17834458 MS.gene85682:CDS
TTCAACTAATAAAGGCTTTG+AGG 0.385076 6.1:+17834726 MS.gene85682:CDS
AACTGATCTGGTTCCTCCTC+CGG 0.386451 6.1:-17836092 None:intergenic
GATGTTCAAATGGAAGCTTT+AGG 0.398765 6.1:+17835842 MS.gene85682:CDS
CATGATGATGTTGGTGGAGT+TGG 0.399067 6.1:+17834886 MS.gene85682:CDS
ATCACCTTCAACAGTCATAT+TGG 0.406845 6.1:-17840747 None:intergenic
ATTTCCCCTAATGACTTTGA+AGG 0.411278 6.1:+17834703 MS.gene85682:CDS
GTGAAACAGCGAGCTGGAAT+AGG 0.412607 6.1:+17841676 MS.gene85682:CDS
GCTTGTTCCAACTAGTGAAA+TGG 0.413647 6.1:+17836765 MS.gene85682:CDS
TCTGATCACAAGGTTGAATC+AGG 0.418691 6.1:+17836128 MS.gene85682:CDS
TGTGCCTCAAACTAGTGAAA+TGG 0.420403 6.1:+17841752 MS.gene85682:CDS
ATCATTGGTGTAGCCTTTGA+TGG 0.420869 6.1:-17837333 None:intergenic
CGAGCTTCAGGGGAGATGAT+TGG 0.427226 6.1:+17840617 MS.gene85682:CDS
ATCATTGGTGTAGCCTTTGA+TGG 0.428276 6.1:-17842313 None:intergenic
AGTAGTCCTGTGGAAGCATT+AGG 0.430762 6.1:+17834494 MS.gene85682:CDS
ACAGTGACGTCGAAGGAAAT+CGG 0.432971 6.1:+17839805 MS.gene85682:CDS
CAGGTCTCTTGTAAAGTGAT+TGG 0.432986 6.1:+17839757 MS.gene85682:intron
CACTGTATTATTTGTCAGCT+TGG 0.441667 6.1:-17839788 None:intergenic
TTCTTCAACTGAACATCCAC+TGG 0.443726 6.1:-17840852 None:intergenic
GCTTGTTCCAACTAGTGAAA+TGG 0.444210 6.1:+17834975 MS.gene85682:CDS
TCTCAACAATCTTGATGCTC+AGG 0.445705 6.1:+17834327 MS.gene85682:CDS
TTGACCTCACTTAACTGATC+TGG 0.447025 6.1:-17836104 None:intergenic
GAATCCATTTCACTAGTTTG+AGG 0.447583 6.1:-17841756 None:intergenic
AGCTTCTGCGATGTGCTTTG+AGG 0.460893 6.1:+17840979 MS.gene85682:CDS
GTTGGGTCAGTGATGTCTAT+AGG 0.463541 6.1:+17835602 MS.gene85682:CDS
AATTTGACAAGGAGGAAGTT+GGG 0.465133 6.1:+17835585 MS.gene85682:CDS
GAAAATCCAATGCAATCATC+AGG 0.465927 6.1:-17841504 None:intergenic
AAATTTGACAAGGAGGAAGT+TGG 0.472245 6.1:+17835584 MS.gene85682:CDS
TGATAATAATAATTGTGTTA+TGG 0.472840 6.1:+17840952 MS.gene85682:CDS
TTGAATGTAGATACTGTTGC+TGG 0.472915 6.1:+17836026 MS.gene85682:CDS
TTGACAAGAAGGAGGAAGTT+GGG 0.474562 6.1:+17842356 MS.gene85682:CDS
TCACTAGTTTGAGGCACAGT+TGG 0.476053 6.1:-17841747 None:intergenic
GCAGTTCCTGATGATTGCAT+TGG 0.478017 6.1:+17841498 MS.gene85682:CDS
CCAAATACACTTGGAGATGT+TGG 0.481756 6.1:+17841585 MS.gene85682:CDS
TTTGACAAGAAGGAAGAAGT+TGG 0.482174 6.1:+17837375 MS.gene85682:CDS
CTTGAGTGATGAACATAAAC+CGG 0.484380 6.1:+17836073 MS.gene85682:CDS
TTTGACAAGAAGGAGGAAGT+TGG 0.487197 6.1:+17842355 MS.gene85682:CDS
TCCTTTACATGTTTCTCCGA+AGG 0.490724 6.1:+17840826 MS.gene85682:CDS
TTGACAAGAAGGAAGAAGTT+GGG 0.492704 6.1:+17837376 MS.gene85682:CDS
ACTTCACTTAATGGATCAGT+TGG 0.497064 6.1:-17840238 None:intergenic
GAAATGTTTAGTAGATTGGC+AGG 0.497175 6.1:-17840644 None:intergenic
CAACCACCGCTGACAGTTGT+CGG 0.499333 6.1:-17834048 None:intergenic
CTATGAATAAATTTGCTAAG+AGG 0.501131 6.1:+17842389 MS.gene85682:CDS
GAACATTAGATTTGACAAGA+AGG 0.501826 6.1:+17837365 MS.gene85682:CDS
TGATGAAGGCTGAAGTTGCT+TGG 0.503481 6.1:-17835000 None:intergenic
CAGCGAGCTGGAATAGGAAG+AGG 0.506984 6.1:+17841682 MS.gene85682:CDS
CTTAATGTTGAAGCCGATGA+AGG 0.507652 6.1:+17835758 MS.gene85682:CDS
GAACATTAGATTTGACAAGA+AGG 0.508646 6.1:+17842345 MS.gene85682:CDS
GCTCATGAAATTATTGCTGC+AGG 0.510151 6.1:+17841160 MS.gene85682:CDS
TACCTAGTGAAACAGCGAGC+TGG 0.516465 6.1:+17841670 MS.gene85682:CDS
ATGTAGATTCTTATCCTAAG+AGG 0.518901 6.1:+17837301 MS.gene85682:CDS
TGGTGCTGATGATGTTCAAA+TGG 0.521528 6.1:+17835832 MS.gene85682:CDS
GGGGAGGAAAACATGCGAAC+TGG 0.522742 6.1:+17840671 MS.gene85682:CDS
ACAGTTCTTTGATAAAATGT+TGG 0.524268 6.1:+17840299 MS.gene85682:CDS
GAAATTGCAATGCACTCCTC+AGG 0.525773 6.1:-17834685 None:intergenic
TATAGGTGTTGTTGCTGAGA+AGG 0.526549 6.1:+17835619 MS.gene85682:CDS
GAACATCCACTGGATTCCTT+CGG 0.528461 6.1:-17840842 None:intergenic
ATCATCAGAAAAGACATGTA+TGG 0.528912 6.1:+17834654 MS.gene85682:CDS
GTAGATACTGTTGCTGGGAA+TGG 0.533961 6.1:+17836032 MS.gene85682:CDS
TTCCAGCTCGCTGTTTCACT+AGG 0.535999 6.1:-17841672 None:intergenic
CATGTTCATGATGATGTTGG+TGG 0.536225 6.1:+17834880 MS.gene85682:CDS
TCTTTATAGATACTGTTGCT+GGG 0.537589 6.1:+17835979 MS.gene85682:intron
AGATGCTTATCCTAAGAAGT+TGG 0.539941 6.1:+17842285 MS.gene85682:CDS
GAAGAGAAGTCGAGCTTCAG+GGG 0.541692 6.1:+17840607 MS.gene85682:CDS
TTCTGTTGAAGATCTTGAAG+AGG 0.543758 6.1:-17842415 None:intergenic
AACAGTATCTACATTCAAGT+TGG 0.544362 6.1:-17836021 None:intergenic
AACTTCCATATACCTGAATA+CGG 0.544637 6.1:-17840328 None:intergenic
TCAGTTGGAAGAACTTGAAC+TGG 0.546004 6.1:-17840223 None:intergenic
GAATATTAAATTTGACAAGG+AGG 0.546543 6.1:+17835577 MS.gene85682:CDS
GAGGTTGGACTCACCATCAA+AGG 0.548940 6.1:+17837320 MS.gene85682:CDS
AGATGCTTATCATAAGAAGT+TGG 0.549508 6.1:+17835517 MS.gene85682:CDS
TTTATGTTCATCACTCAAGT+TGG 0.550996 6.1:-17836069 None:intergenic
AACACCAATATGACTGTTGA+AGG 0.551917 6.1:+17840743 MS.gene85682:CDS
AGATTCTTATCCTAAGAGGT+TGG 0.553782 6.1:+17837305 MS.gene85682:CDS
AGAAGAGAAGTCGAGCTTCA+GGG 0.558793 6.1:+17840606 MS.gene85682:CDS
GAAGTTGGACACGCCATCAA+AGG 0.558921 6.1:+17842300 MS.gene85682:CDS
ATATGCTGACTTCACTTCAC+AGG 0.561152 6.1:-17840579 None:intergenic
TCCATATACCTGAATACGGA+AGG 0.569708 6.1:-17840324 None:intergenic
GCTTCAACATTAAGATCACT+TGG 0.579386 6.1:-17835749 None:intergenic
TCCTTCGGAGAAACATGTAA+AGG 0.580663 6.1:-17840827 None:intergenic
GATCAAATCAGTAACCATGA+AGG 0.583352 6.1:+17840782 MS.gene85682:CDS
AATATCATCAAAAGCCACTT+CGG 0.585255 6.1:-17841035 None:intergenic
AAGTTTAAATCACAACCTGA+AGG 0.589845 6.1:+17836721 MS.gene85682:CDS
AAGGAAAACAATCAGGGAGA+AGG 0.590206 6.1:+17834835 MS.gene85682:CDS
TCTTTGCAAAAGACGAGTCA+TGG 0.591635 6.1:+17836685 MS.gene85682:CDS
GGACGCAGTTGCTGTAATGT+CGG 0.591995 6.1:+17840907 MS.gene85682:CDS
ATCTACTAAACATTTCAGGT+GGG 0.592890 6.1:+17840651 MS.gene85682:CDS
GCTCAGGAAATTGTTGCTGC+AGG 0.594902 6.1:+17834343 MS.gene85682:CDS
TTGGAGCAGAAGATGAAAGC+CGG 0.595723 6.1:+17834905 MS.gene85682:CDS
AATTGACGACATGATAGAGA+AGG 0.596360 6.1:+17834816 MS.gene85682:CDS
AATCTACTAAACATTTCAGG+TGG 0.597898 6.1:+17840650 MS.gene85682:CDS
TCCAAATAAACTTGGAGACG+TGG 0.598906 6.1:+17834765 MS.gene85682:CDS
ATTCTAATTGTCTATGTCGG+TGG 0.600587 6.1:+17834023 None:intergenic
ATAGAGAAGGAAAACAATCA+GGG 0.606666 6.1:+17834829 MS.gene85682:CDS
TGAAGCTTTAACGTCATTAG+GGG 0.607432 6.1:-17841526 None:intergenic
ACTAAACATTTCAGGTGGGG+AGG 0.608372 6.1:+17840655 MS.gene85682:CDS
GCAAATTGGTATCGATGAGG+AGG 0.616210 6.1:+17839852 MS.gene85682:CDS
ATTGATTTCTAGTAGTCCTG+TGG 0.619206 6.1:+17834484 MS.gene85682:CDS
CATTAGATTTGACAAGAAGG+AGG 0.620167 6.1:+17842348 MS.gene85682:CDS
AATTGATGACGTGATGGAGA+AGG 0.620894 6.1:+17841641 MS.gene85682:CDS
ATTGGTATCGATGAGGAGGA+AGG 0.622924 6.1:+17839856 MS.gene85682:CDS
TGATGAACATAAACCGGAGG+AGG 0.624013 6.1:+17836079 MS.gene85682:CDS
TGTCATGTTCATGATGATGT+TGG 0.627220 6.1:+17834877 MS.gene85682:CDS
AGATGCTTGTGAAGTGAGCT+CGG 0.629898 6.1:+17836660 MS.gene85682:CDS
CATGCAAATTGATGACGTGA+TGG 0.634132 6.1:+17841635 MS.gene85682:CDS
TCTACTAAACATTTCAGGTG+GGG 0.634793 6.1:+17840652 MS.gene85682:CDS
GCTCCGACAACTGTCAGCGG+TGG 0.637395 6.1:+17834045 MS.gene85682:CDS
GCGAACTGGTGTCGATGAGG+TGG 0.638513 6.1:+17840685 MS.gene85682:CDS
ATGTATGGTTGCAGATCCTG+AGG 0.640708 6.1:+17834669 MS.gene85682:CDS
ATCTAGTTCAGCACTCACAC+TGG 0.641230 6.1:-17835657 None:intergenic
TGAACCTTCAAAGTCATTAG+GGG 0.642032 6.1:-17834707 None:intergenic
TGAATGTAGATACTGTTGCT+GGG 0.643836 6.1:+17836027 MS.gene85682:CDS
ATTGTACCTAATGCTTCCAC+AGG 0.644938 6.1:-17834500 None:intergenic
AAAGACGAGTCATGGTCAAG+AGG 0.645697 6.1:+17836693 MS.gene85682:CDS
AAATAATACAGTGACGTCGA+AGG 0.648098 6.1:+17839798 MS.gene85682:CDS
AGCATCTGCATTCCCAACAA+CGG 0.651762 6.1:-17836644 None:intergenic
ATCACAACCTGAAGGAGACG+AGG 0.652827 6.1:+17836729 MS.gene85682:CDS
AGAGAATATTAAATTTGACA+AGG 0.654937 6.1:+17835574 MS.gene85682:CDS
TGAGGTCAAGTCTGATCACA+AGG 0.658220 6.1:+17836118 MS.gene85682:CDS
TACTTATGAGAACACCGAAG+TGG 0.658794 6.1:+17841021 MS.gene85682:CDS
AAAACAATCAGGGAGAAGGT+CGG 0.659196 6.1:+17834839 MS.gene85682:CDS
GTGGCTCCGACAACTGTCAG+CGG 0.659846 6.1:+17834042 MS.gene85682:CDS
GGAACCAGATCAGTTAAGTG+AGG 0.665857 6.1:+17836100 MS.gene85682:CDS
GAGTGATGCAAATTCAGACA+AGG 0.666309 6.1:+17834939 MS.gene85682:CDS
AGTGTGAGTGCTGAACTAGA+TGG 0.666413 6.1:+17835659 MS.gene85682:CDS
ATAGACTTGAACTCAAACAG+TGG 0.668405 6.1:+17835812 MS.gene85682:CDS
CCATATACCTGAATACGGAA+GGG 0.672710 6.1:-17840323 None:intergenic
GTTTCTCCGAAGGAATCCAG+TGG 0.672755 6.1:+17840836 MS.gene85682:CDS
GAGTGATGCAAATTCAGACG+AGG 0.677159 6.1:+17841704 MS.gene85682:CDS
TATGCAAATTGGTATCGATG+AGG 0.679618 6.1:+17839849 MS.gene85682:CDS
GGAAATCGGATTTATTGATG+CGG 0.682686 6.1:+17839819 MS.gene85682:CDS
CATGCGAACTGGTGTCGATG+AGG 0.693001 6.1:+17840682 MS.gene85682:CDS
GAGTGATGAACATAAACCGG+AGG 0.720588 6.1:+17836076 MS.gene85682:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.1 gene 17834036 17842441 17834036 ID=MS.gene85682
chr6.1 mRNA 17834036 17842441 17834036 ID=MS.gene85682.t1;Parent=MS.gene85682
chr6.1 exon 17834036 17834124 17834036 ID=MS.gene85682.t1.exon1;Parent=MS.gene85682.t1
chr6.1 CDS 17834036 17834124 17834036 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17834294 17834364 17834294 ID=MS.gene85682.t1.exon2;Parent=MS.gene85682.t1
chr6.1 CDS 17834294 17834364 17834294 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17834450 17834515 17834450 ID=MS.gene85682.t1.exon3;Parent=MS.gene85682.t1
chr6.1 CDS 17834450 17834515 17834450 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17834629 17835036 17834629 ID=MS.gene85682.t1.exon4;Parent=MS.gene85682.t1
chr6.1 CDS 17834629 17835036 17834629 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17835498 17835863 17835498 ID=MS.gene85682.t1.exon5;Parent=MS.gene85682.t1
chr6.1 CDS 17835498 17835863 17835498 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17835988 17836149 17835988 ID=MS.gene85682.t1.exon6;Parent=MS.gene85682.t1
chr6.1 CDS 17835988 17836149 17835988 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17836641 17836826 17836641 ID=MS.gene85682.t1.exon7;Parent=MS.gene85682.t1
chr6.1 CDS 17836641 17836826 17836641 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17837286 17837397 17837286 ID=MS.gene85682.t1.exon8;Parent=MS.gene85682.t1
chr6.1 CDS 17837286 17837397 17837286 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17839634 17839676 17839634 ID=MS.gene85682.t1.exon9;Parent=MS.gene85682.t1
chr6.1 CDS 17839634 17839676 17839634 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17839760 17839877 17839760 ID=MS.gene85682.t1.exon10;Parent=MS.gene85682.t1
chr6.1 CDS 17839760 17839877 17839760 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17840209 17840337 17840209 ID=MS.gene85682.t1.exon11;Parent=MS.gene85682.t1
chr6.1 CDS 17840209 17840337 17840209 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17840555 17841181 17840555 ID=MS.gene85682.t1.exon12;Parent=MS.gene85682.t1
chr6.1 CDS 17840555 17841181 17840555 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17841451 17841813 17841451 ID=MS.gene85682.t1.exon13;Parent=MS.gene85682.t1
chr6.1 CDS 17841451 17841813 17841451 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
chr6.1 exon 17842266 17842441 17842266 ID=MS.gene85682.t1.exon14;Parent=MS.gene85682.t1
chr6.1 CDS 17842266 17842441 17842266 ID=cds.MS.gene85682.t1;Parent=MS.gene85682.t1
Gene Sequence

>MS.gene85682

ATGTCGGTGGCTCCGACAACTGTCAGCGGTGGTTGTGCTCTCACAGCTGACTTGAGACCAAACAAACTAAAAAAAAAAAAAAAACTAGGGTTAGCCTTGTCGGCAGAACCCAAAGAAAAACCTTGCTCTAGATACCATCTTGAATATGAATATTTCACATAATGTTGTAAGGAATGAAAACCAACTATATACATGAGATGTGATCCAAATACTAAATAGGAATGCAATCCTATCATTAACTCCTAATGATACTAACAGATCATACTATATTAAATATAATAAATATCAATATCTCAACAATCTTGATGCTCAGGAAATTGTTGCTGCAGGTATTGATTTGTTTCACCAAATAATTTACGGTGAAACTAGTTTTAGGTGAAGTACTTTGTTTCGCATTCTTAGTTTAATATTCAGATGGTAGACATGATTTATTTATGACAACTGGTGAATTGATTTCTAGTAGTCCTGTGGAAGCATTAGGTACAATGCAGTTTTGTTTTTAAATATATTGTTATTCATAGCTTATATAAATAACTTTTGATGATATTATATTTTATTTGCTTTCTTTGTTAATCCTTTATCTTAACATGCAGATGCTTGTGAAGAAGAGATGCTGAGATCATCAGAAAAGACATGTATGGTTGCAGATCCTGAGGAGTGCATTGCAATTTCCCCTAATGACTTTGAAGGTTCAACTAATAAAGGCTTTGAGGTTGAACCATTTTTTGATCCAAATAAACTTGGAGACGTGGAAACTTGTAACATGAATGAAAGCATGCAAATTGACGACATGATAGAGAAGGAAAACAATCAGGGAGAAGGTCGGCACTTTTTTGAGAACTGTCATGTTCATGATGATGTTGGTGGAGTTGGAGCAGAAGATGAAAGCCGGAAAAAGAAGAGGAGTGATGCAAATTCAGACAAGGAAGTAAAAGATGAGCTTGTTCCAACTAGTGAAATGGATCCAAGCAACTTCAGCCTTCATCAACTTTTTGCTTCAGGTAAAGTTTAAATTTTGAGTAACGAAATGCATTTTACATTTTATTCAACAAATGTTTTATATCGAAGTCATGGTCGCAATTGCATTGCCCCGGTTACTTTATGAAAATATTTAATTTTCATTTTATTACATTTATGGTCATTTTAAATTGGGAGCAAACTATGAAGAATGCATTTTCAAAATAAATGAAAACAATGTTTTGACAATTTCAAAATTTATGAAAATGAGTTGAATCTGTTTTTAAATATTGCAAAAGAAAATTACGAGCAAAATGCATTTCTTCAATGTTCATTATTTGAAGTGAAAATGAAAATGTGACACATGAGAATAAACAGACCCTTATGCTTTAGTTAAATACGTTTGATGCAGTTCAGATTGCGGCTGCAGGCCTTTTTATAAAATGTATACGCGGCTGTTTAGATATAGGACTTAATCGACGTTTTTGTAAACCTTGATTTATAGAAATTGCTTCTGGAGATGAAGATGCTTATCATAAGAAGTTGGACTCACCATCAAAAGCTACACCAATGATACATAAAGAGAATATTAAATTTGACAAGGAGGAAGTTGGGTCAGTGATGTCTATAGGTGTTGTTGCTGAGAAGGATTCGAATGAGAAGACCAGTGTGAGTGCTGAACTAGATGGTGTCAAGTCTGATCACAAGTTTGATAATTTCCAAATTGAAGACAATCAAGACTTGTCTCAAGCAACACCAAGTGATCTTAATGTTGAAGCCGATGAAGGCGCCGATAAAGACAAATTGAATGTTGAAGTTATAGACTTGAACTCAAACAGTGGTGCTGATGATGTTCAAATGGAAGCTTTAGGTATAGCAAATCTGTTGCTAGAACAATACCATTTCTATTTCATGAATTTCTATGTTAGTTTTGTATCCATTTTCGTTTTTATAAGAATATTAGTTTCAAAATTTTCAAACTTTTATCTTTATAGATACTGTTGCTGGGAATGATTCGAACGTTAAGACCAACTTGAATGTAGATACTGTTGCTGGGAATGGTTCAAACGAGAAGACCAACTTGAGTGATGAACATAAACCGGAGGAGGAACCAGATCAGTTAAGTGAGGTCAAGTCTGATCACAAGGTTGAATCAGGTATAGAACTTTATTTAAATTTCACTCAAAGTTTTGTGTTAGAACAGGAACCAGTAATAAAAGAATAAAAGAAACGAAAATCGCAAGACAATGAGACACGATCTTTGTTTACACAGTTCGGCAATGGTGCTTATATATACAGCACTACGATTTATATTACAACAATACCCCTGAGCTGTACCTTGATTGAGCCATATCAACTGTAATCTACAATCTATAACTATTATTTATAAATGCAATGTTTGATTTTCAATTTATCCTTGATTATTATTCTTGTTATAAGGGTCATGCTAATTTGTGCCTTAAGGGCACATGTTAAGAAACCCAAAAAGAGCAATTTTGCATTGAAAAACACAGTAGTTTAAATTTTAAGAAGTTGAATGCACGACTTTTGATACATATATTTCTATAATGAATTCCTTAACATGTGCCCTTGAGGGCACAAGTTAGCATTTGCCTAATTTATAATATCTCAATCCTTTACATTTTAGGGTCCGTTGTTGGGAATGCAGATGCTTGTGAAGTGAGCTCGGCATCTTTGCAAAAGACGAGTCATGGTCAAGAGGTGTTTAAGTTTAAATCACAACCTGAAGGAGACGAGGAAGTGAAAGATGAGCTTGTTCCAACTAGTGAAATGGATTCAAGCAACTTCTGCCTTCATCAACTTTTTGCTTCAGGTAAAGTTTAAATTTTGAGTAAGGAAATGCATTTTAATTTTTATTCAACAAATGTTTTAAATCGAAGTTGTGGTCACAATTGCATTTCCCCGGTTACTTTATGAAAATATTTCATTTTCATTTTGTTACATTTATGTTCATTTTAAATTGAGAACAAACTATGTAGAATACATTTTCAAAATCAATGAAAACAATGTTTTGACATTTTCAAAATTTCTGAAAATGAGTTCAATCTGTTTTCAAAAATTGCAAAAGAAAATTACGAGCAAAATGCATTTCCTCAATGTTCATTAGTTGAAGTGAAAATGTAAACGAAACACATGAGAATAAACAGACCCTTATGATGTAGTTAAATACGTTTGATGCAGTTCAGATTGCGGTTGCTGACCTTTTTAAACATTGCATAAGCAACTGTTTCGGTAGGAATTAATCTATATTTTTGTAAACCTTGCTTTATAGAAACTGCTTCTGGAGATGTAGATTCTTATCCTAAGAGGTTGGACTCACCATCAAAGGCTACACCAATGATACATAAAGAGAACATTAGATTTGACAAGAAGGAAGAAGTTGGGTCAGTGATGTCTAGGAATAAATTTGCTAAGAGGCAACCTCTTCAAGATCTTAAGCAGAATTGAACTTTTCAGTACATGTAGTGTTGGTTACTTACTGTTTTTATTTTGGTGAATGATCATGTTACTATTATTTGATGGTCATGCTTTTTAGTATTGGAACTTTATGATTTATGATGACTCCTTGGTGTTAAGTGGAAGTTCTTTTTTAATGCTTATTGCTTAGCTCCTTTTATTATAAGATTGAGATTTTCATTGATATATATTAAAGTTTATATTTTGGTATGCATACTAAAGTTTATATTTTGGTATGAAACATTGTTGCTGATATATATTAGACTTGACACTGATATTGGCATTTCGACAACGGTAACGATATGAGAAATGGAGTAACACAATGCAGCACTAGGACAAAATGTTTCGTTTTTGTTCATAGCTTGGTTAGATTAGATTTTGAAGCACAAATACTACATAAAAAACAAGCATCACCACAACACCCTAGCCAGCCGAAGTAGTCCTTCATCGCCTTAGGCAATCCTCCGATCCTATTAGAAAACTGTATATTGGAGAATTCAGAGAGCTTCTAGCTTCTCGGTGCAACAATGTTTTTATTCAATTTCTTTTCTGATTGATTATTGTTATAGGAAGAGGAAGAATCTATATATAGACAAAATGTAAAGACCTCTAACTGACTGACACGTGTCAGTCAGCATTTCCTAAGAGACTGGCTGTTGTCAGTAATACTGTTACAAAGATAGTAATCTAGTGTAGCTAAGCTATAGTGGTCATCCTAATCACTAGTTATCAATATCCTTTAATACTCCCCTGCAAGCTAATGTGTGGGGTTGCAGTACACAGTTAGCTTGGCTCTCAAGTCTTCAAACCTTGTAGGAGGCAGGGCTTTAGTCATAATGTCAGCAACCTAAATCTGACCAGGAATATGAGAGCCTAAGAGTTGCTTCTGTATCACCTTTTCTCTAACAAAGAACAGATCTAGTTCCATATGTTTAGATCTTGCATGTAAGACTGAGTTGTGAGCAAGAGCTATAGTGCTCATATTGTCACAAAGAACCTTAGGAGTAGCGAAGTATACGCCCAGTTCAGAGATGAGAGATTGCATCCACAACAGTTCACTGGTTGCTAATGCCAAGCTGTGGTATTCAGCTTCTGTACTGGACCGGACAATAATTGGCTGCTTCTTTGCCCACCATGAGATTAGGTTGGGGCCAAGAAACACACAAGCGCCAGACGTAGACCTGCGATCATCAGGGTCTGATCCCCAGTCTGCATCACAGTATGCTAGAAGGGAAAGAGGAGAAGCATGAATGGGTCTGATAAGGAGACCCCAACTGAGGGTGCCCTCAAGATACCTTAGGATACGTTTGACAGCTGTCCAATGAGATTCAAGGGGATTGGACATGAACTGACAAACTTTGTTGACTGAGAAACATATCTCTGGCCTAGTGATGACTACATATCTGAGAGTCCTATATAGAGTAGGGTCAGAGAAAGGAGTTGACCCATCTTTAGATAGTTTTAAACCAGATATCATAGGTGAGGGGAGGGGCTTAGCCTCTTGCATATTAGTTTTAGCAAGAAGGTCTCTCAGATACTTGCTTTGAGTAAGGAGTAGTTAACCATTAGGCTGAGCTTTAACTTCAATGCCTAAGAAATAGTCCAGCGTGCCAAGATCCTTCAAGGAAAAAGCTGAGTTTAATTGAGATATCAACTGCTGTAGGAGAACTGTGTTGTTACCAGTGACAATTATGTCATCAACATAGACTAGCATGTAGAGTAGATGAATAGAGATGGGTCACATTTGCTAGCATGAAATCCAAATTGGAGCAATGTAGTCTGAAGCTTGTCAAACCAAGCTCTAGGGGCCTGCTTGAGGCCATAGAGACCCTTGTTAAGCTTGCATACAAGAGACTTATTTGTGTTTTCAAAGCCAGGAAGCTGTGTCATATAAACTGTTTCTTCAAGATTACCATCAAGAAAAGCATTATTCACATCCAGCTGGTGAAGATGCCACTTTTTAGATAAAGCCAGAGACAAAATGGTGTGAACCCTTTGGCCACAAGCCTGGCCTTGTATTTGTTAACTGTACCATCATGATTTTCTTTAATTCTGAAAATCCACTTGCAAACAATAGGGACCCTGTTAGATGGAACAGAGACTAGACTCCATGTATTGTTTTTCTGCAAAGCATCATACTCAGATTGCATTGCAGCAAGCCAGGTCGGATTTTAAGGCTTGCTTGGTGGTTTTGAGTTCAGCAAGAGTAAGCAACAAAGTGGGATGAAGTTTTGGGCATGTGATGCCTGATTTCGCACGAGTATTCATGGGGTACACTGGGCAAGGCAGGTCTCTTGTAAAGTGATTGGTTCATCTACCAAGCTGACAAATAATACAGTGACGTCGAAGGAAATCGGATTTATTGATGCGGAGAAAAATATGCAAATTGGTATCGATGAGGAGGAAGGTGATCATAATGAAGTGAAAAAGATTGACGACATCGTCAAAGTGACTGTTGAAAATATGCAAATTGGATTTTTTTATGTGGACGAAAATATGCAAGTTGGTGGCGATGAGGTAGCAAGTTTATCATAGTGAATTGAAAAAGATTGATGACAATGCCAATGTGACTGCTGAAAATATGCAAATTGGATTTTTTTTTTTTTTATATGGAGGAAAATATGGTATTTGGTGTCGATGAGGAGCTTGTTGATCATAGTGAAGAGAGAAAGATTGATGACGACGCCAATGTGACTGTTGGAGAAATTCTAAATGACGTTATTCCTCTGGTTTTGAAGATTCAGATAGGACACCAGTTCAAGTTCTTCCAACTGATCCATTAAGTGAAGTTGAAACTAGTGATCTTGATGCTCATAAAATGGCTATTGACAGTTCTTTGATAAAATGTTGGTCCCTTCCGTATTCAGGTATATGGAAGTTTCAAAACTATTTATGAATGCAATAAAAATTATTGGTGTCTCTGCTAGTATATAACTTGGATTTCTTAATCCTTTAATCCTTTATTTTTTTGAACATTTCTTCCACACATCTACTTGTTTGTTATCTTTTACACCTAGACATAAACAATGCTATAGTTGATTTTATTGGAATTAATTTATAACATCTGAAACACTTATATTTTAGGCATTGCTGCTGGACATGTAGATGCCTGTGAAGTGAAGTCAGCATATTCGCAGAAGAGAAGTCGAGCTTCAGGGGAGATGATTGGTTCACCTGCCAATCTACTAAACATTTCAGGTGGGGAGGAAAACATGCGAACTGGTGTCGATGAGGTGGAAGTTGATCACAGTCAAGTGAAAAAAATTGATGAGAACACCAATATGACTGTTGAAGGTGATACTGAAAATCTAGATCAAATCAGTAACCATGAAGGATCAATCGTGAAAGATGTGAATCCTTTACATGTTTCTCCGAAGGAATCCAGTGGATGTTCAGTTGAAGAAGTTCACAAATTGGATGATAATAATTATGTTTTGGACGCAGTTGCTGTAATGTCGGTTGAACAAGTTCACAAATCTGATGATAATAATAATTGTGTTATGGACGTAGCTTCTGCGATGTGCTTTGAGGCATCAACAAGTGCGAAAAATACTTATGAGAACACCGAAGTGGCTTTTGATGATATTCTAGACGAGGTTCGCTTATCTAGTTTTGAAGATTCAGATGGGACACCAGCTCAGTTTTTGCCAACTGATCAATCAACTAAAATGGAGACTAATGATCTTGAAGCTCATGAAATTATTGCTGCAGGTATTGATTTGTTTCACCAAATAATTTACGGTGAAACTAGTTTTAGGTGAAGTATTTTATTTCGCATTCTTAGTTTAATATTCAGATGGTACACACGATCTATTTATGACAACTGGTGAATTGATTTCTAGTAGTACTTATCCCATGGCAGCATTAGGTATAATGCAGTTTTGTTTTTAAATATATTGTTATTCATAGCTTATATAAATAAATTTTCATGATATAATATTTTATTGCATTCTTTCTTAATCCTTTATCTTCCCATGCAGATACTTGTGAAGCGATGCTGAAATCATCAGAAAAGTCATGCATTGCTGCAGTTCCTGATGATTGCATTGGATTTTCCCCTAATGACGTTAAAGCTTCAACTAATAAAGGCTTTGAGGTTGAACCATTTTTTGATCCAAATACACTTGGAGATGTTGGTATCGTAACTTGTAACATGAATAAAAGCATGCAAATTGATGACGTGATGGAGAAGGAAAATCTACCTAGTGAAACAGCGAGCTGGAATAGGAAGAGGAGTGATGCAAATTCAGACGAGGAAGTGAAAGACGAGCTTGTTCCAACTGTGCCTCAAACTAGTGAAATGGATTCAAGCAATTTCAGCCTTCATCGACTTTTTGCTTCAGGTAAAGTTTAAATTTTGAGTAAGGAAATGCATTTTAATTTTTATTCAACAAATGTTTTATATCGAAGTCGTGGTCGTAATTGCATTGCCCCGGTTACTTTATGAAAGTATTTAATTTTCATTTTATTACATTTATGTTCATTTTAAATTGCGAACAAACTATGAAGAATACATTTTCAAAATCAATGAAAACAATCATTTTCATAATTTCTGAAAATGAGTTCAATCTGTTTTCAAAAATTGCAAAAGAAAATTACGAGCAAAATGCATTTCCTCAATGTTCATTAGTTGAAGTGAAAATCAAAACAAGACACATGAGAATAAACAAACCCTTATGCTTTAGTTAAATACGTTTGATGCAGTTCAGATTGCAGTTGCAGACCTTTTTAAACATTGCATAAGCAACTGTTTCGGTAGGAATTAATCGATATTTTTGTAAACCTTGATTTATAGAAACTGCTTCTGGAGATGAAGATGCTTATCCTAAGAAGTTGGACACGCCATCAAAGGCTACACCAATGATACATAAAGAGAACATTAGATTTGACAAGAAGGAGGAAGTTGGGTCATTGATGTCTATGAATAAATTTGCTAAGAGGCAACCTCTTCAAGATCTTCAACAGAATTGA
Protein sequence

>MS.gene85682.t1

MSVAPTTVSGGCALTADLRPNKLKKKKKLGSYYIKYNKYQYLNNLDAQEIVAADGRHDLFMTTGELISSSPVEALDACEEEMLRSSEKTCMVADPEECIAISPNDFEGSTNKGFEVEPFFDPNKLGDVETCNMNESMQIDDMIEKENNQGEGRHFFENCHVHDDVGGVGAEDESRKKKRSDANSDKEVKDELVPTSEMDPSNFSLHQLFASEIASGDEDAYHKKLDSPSKATPMIHKENIKFDKEEVGSVMSIGVVAEKDSNEKTSVSAELDGVKSDHKFDNFQIEDNQDLSQATPSDLNVEADEGADKDKLNVEVIDLNSNSGADDVQMEALDTVAGNDSNVKTNLNVDTVAGNGSNEKTNLSDEHKPEEEPDQLSEVKSDHKVESGSVVGNADACEVSSASLQKTSHGQEVFKFKSQPEGDEEVKDELVPTSEMDSSNFCLHQLFASETASGDVDSYPKRLDSPSKATPMIHKENIRFDKKEEVGSDFKACLVVLSSARVSCKVIGSSTKLTNNTVTSKEIGFIDAEKNMQIGIDEEEDSDRTPVQVLPTDPLSEVETSDLDAHKMAIDSSLIKCWSLPYSGIAAGHVDACEVKSAYSQKRSRASGEMIGSPANLLNISGGEENMRTGVDEVEVDHSQVKKIDENTNMTVEGDTENLDQISNHEGSIVKDVNPLHVSPKESSGCSVEEVHKLDDNNYVLDAVAVMSVEQVHKSDDNNNCVMDVASAMCFEASTSAKNTYENTEVAFDDILDEVRLSSFEDSDGTPAQFLPTDQSTKMETNDLEAHEIIAADTCEAMLKSSEKSCIAAVPDDCIGFSPNDVKASTNKGFEVEPFFDPNTLGDVGIVTCNMNKSMQIDDVMEKENLPSETASWNRKRSDANSDEEVKDELVPTVPQTSEMDSSNFSLHRLFASETASGDEDAYPKKLDTPSKATPMIHKENIRFDKKEEVGSLMSMNKFAKRQPLQDLQQN