Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86424.t1 | XP_003597926.2 | 97.6 | 296 | 7 | 0 | 1 | 296 | 1 | 296 | 2.30E-161 | 578.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86424.t1 | O80358 | 77.9 | 285 | 63 | 0 | 1 | 285 | 1 | 285 | 6.8e-130 | 465.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86424.t1 | G7II90 | 97.6 | 296 | 7 | 0 | 1 | 296 | 1 | 296 | 1.6e-161 | 578.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene86424 | 0.830883 | 2.28E-55 | -1.69E-46 |
| MS.gene05157 | MS.gene86424 | 0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene86424 | 0.816388 | 5.67E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene86424 | 0.83262 | 8.52E-56 | -1.69E-46 |
| MS.gene054584 | MS.gene86424 | 0.847335 | 1.23E-59 | -1.69E-46 |
| MS.gene055465 | MS.gene86424 | 0.831172 | 1.94E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene86424 | 0.807386 | 5.18E-50 | -1.69E-46 |
| MS.gene055468 | MS.gene86424 | 0.816674 | 4.90E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene86424 | -0.833189 | 6.15E-56 | -1.69E-46 |
| MS.gene056043 | MS.gene86424 | -0.813931 | 1.99E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene86424 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene86424 | 0.828295 | 9.73E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86424.t1 | MTR_2g104100 | 96.717 | 396 | 12 | 1 | 1 | 395 | 1 | 396 | 0.0 | 773 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86424.t1 | AT1G52500 | 70.088 | 341 | 97 | 4 | 1 | 336 | 1 | 341 | 1.06e-170 | 482 |
| MS.gene86424.t1 | AT1G52500 | 73.333 | 285 | 71 | 2 | 1 | 284 | 1 | 281 | 1.10e-155 | 440 |
| MS.gene86424.t1 | AT1G52500 | 72.973 | 259 | 67 | 2 | 1 | 258 | 1 | 257 | 8.32e-143 | 407 |
| MS.gene86424.t1 | AT1G52500 | 72.973 | 259 | 67 | 2 | 1 | 258 | 1 | 257 | 8.32e-143 | 407 |
| MS.gene86424.t1 | AT1G52500 | 77.027 | 222 | 51 | 0 | 1 | 222 | 1 | 222 | 1.88e-130 | 374 |
Find 89 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGGCGCTGACGAGAATT+TGG | 0.221084 | 2.3:+890848 | MS.gene86424:CDS |
| ATATTTCAGGCATTGGAAAT+TGG | 0.240383 | 2.3:+888307 | MS.gene86424:CDS |
| TTCTTTGAGGCTTTCCCTCT+GGG | 0.288446 | 2.3:-890801 | None:intergenic |
| CCTCTGCAGAGCTATATTTC+AGG | 0.317206 | 2.3:+888294 | MS.gene86424:intron |
| CTTTGATTGCTTCTCTCCCT+TGG | 0.317683 | 2.3:-891045 | None:intergenic |
| GTAGTCAATATCCCACTAAT+TGG | 0.319108 | 2.3:+889829 | MS.gene86424:CDS |
| TTGCTGTAACAAAGTATAAA+AGG | 0.321116 | 2.3:+885629 | MS.gene86424:CDS |
| TTTCTTTGAGGCTTTCCCTC+TGG | 0.329200 | 2.3:-890802 | None:intergenic |
| AACCAGGCTCGGGGACTAAT+AGG | 0.335713 | 2.3:+891015 | MS.gene86424:CDS |
| ACCATCAACAAAAGCTTTGC+CGG | 0.348394 | 2.3:-889877 | None:intergenic |
| TATTTCAGGCATTGGAAATT+GGG | 0.367779 | 2.3:+888308 | MS.gene86424:CDS |
| TCACAAGTGTTAAAAGAAAC+TGG | 0.374623 | 2.3:+890774 | MS.gene86424:CDS |
| GAATTCGAAGCTTCCGTTGT+TGG | 0.375577 | 2.3:+885411 | MS.gene86424:CDS |
| CCGTTTCCCTCTTTCCAATT+CGG | 0.381749 | 2.3:+885495 | MS.gene86424:CDS |
| ATCAGGTCCAAGCTCAGATA+TGG | 0.382869 | 2.3:-887959 | None:intergenic |
| ATTTCATCACCGCAGGTGGC+AGG | 0.416756 | 2.3:+890628 | MS.gene86424:CDS |
| CAGAGCTATATTTCAGGCAT+TGG | 0.419170 | 2.3:+888300 | MS.gene86424:intron |
| AATTCGAAGCTTCCGTTGTT+GGG | 0.422866 | 2.3:+885412 | MS.gene86424:CDS |
| ATCATCGGCGACGATGCATT+TGG | 0.423442 | 2.3:-885358 | None:intergenic |
| CAATCAAAGAAACGTGTTCA+AGG | 0.450717 | 2.3:+891059 | MS.gene86424:CDS |
| GCTGCAGCTAGACGATGGTT+TGG | 0.452703 | 2.3:+887791 | MS.gene86424:intron |
| ATTGTCATCGTCACTTTCCT+CGG | 0.455015 | 2.3:-890940 | None:intergenic |
| CAGATAGCTTCTAGCCTGTC+AGG | 0.458232 | 2.3:+889499 | MS.gene86424:CDS |
| TTCCTATTAGTCCCCGAGCC+TGG | 0.459245 | 2.3:-891017 | None:intergenic |
| GTAACTGTGTTAGGTATGGC+TGG | 0.461478 | 2.3:+885586 | MS.gene86424:intron |
| GCCGGAGCTACCGGAGGTAG+AGG | 0.468617 | 2.3:+885290 | MS.gene86424:CDS |
| CAAGAAGAAAACTGAAATCA+AGG | 0.473543 | 2.3:+888029 | MS.gene86424:CDS |
| GAGCACAATGCCGGAGCTAC+CGG | 0.482856 | 2.3:+885281 | None:intergenic |
| GAAAAGAAGAAACCAGGCTC+GGG | 0.483523 | 2.3:+891005 | MS.gene86424:CDS |
| GGAAAGTCTCAAATCAAAGA+AGG | 0.484998 | 2.3:+890869 | MS.gene86424:CDS |
| CATTCCCGTGAAAAGAAGCC+CGG | 0.485250 | 2.3:+889858 | MS.gene86424:CDS |
| GCCTCTACCTCCGGTAGCTC+CGG | 0.498178 | 2.3:-885291 | None:intergenic |
| GGAATGAAATATCCAATTAG+TGG | 0.507785 | 2.3:-889841 | None:intergenic |
| TTGAGCAGCTTTCTCCTGAC+AGG | 0.509313 | 2.3:-889513 | None:intergenic |
| CTGTAAATGACGAGGATGAA+TGG | 0.513522 | 2.3:+886308 | MS.gene86424:CDS |
| CTTCTCGCCGCCTCTACCTC+CGG | 0.514260 | 2.3:-885300 | None:intergenic |
| TCTATATAAGTGCATTAAAG+AGG | 0.514418 | 2.3:+889537 | MS.gene86424:CDS |
| AGTAAACTCGTCAAGTGTCA+TGG | 0.514613 | 2.3:-887995 | None:intergenic |
| CCATCAACAAAAGCTTTGCC+GGG | 0.519750 | 2.3:-889876 | None:intergenic |
| TCAGGTCCAAGCTCAGATAT+GGG | 0.520534 | 2.3:-887958 | None:intergenic |
| GGCTGGTGCTGTATACATCA+AGG | 0.525973 | 2.3:+885603 | MS.gene86424:CDS |
| GAAAGTCTCAAATCAAAGAA+GGG | 0.526412 | 2.3:+890870 | MS.gene86424:CDS |
| CGGTGGAAGAGAACTGTATC+GGG | 0.530121 | 2.3:+885325 | MS.gene86424:CDS |
| GATATGGGAGGCACTGATGA+TGG | 0.533171 | 2.3:-887943 | None:intergenic |
| ATGATTGATTTCATCACCGC+AGG | 0.534683 | 2.3:+890621 | MS.gene86424:CDS |
| GAGAGTACCGAATTGGAAAG+AGG | 0.538227 | 2.3:-885502 | None:intergenic |
| GTGCCTCCCATATCTGAGCT+TGG | 0.543407 | 2.3:+887952 | MS.gene86424:CDS |
| TTGTTGCAGCTCGTCGGAAG+GGG | 0.544764 | 2.3:+885442 | MS.gene86424:CDS |
| GCGGTGGAAGAGAACTGTAT+CGG | 0.546118 | 2.3:+885324 | MS.gene86424:CDS |
| GTCGATGACTTTGTCATCAT+CGG | 0.552732 | 2.3:-885373 | None:intergenic |
| GATTGTTGCAGCTCGTCGGA+AGG | 0.555315 | 2.3:+885440 | MS.gene86424:CDS |
| GTAAACTCGTCAAGTGTCAT+GGG | 0.556504 | 2.3:-887994 | None:intergenic |
| AGAGGCGGCGAGAAGAGCGG+TGG | 0.561155 | 2.3:+885308 | MS.gene86424:CDS |
| GTCACAATACATCTTTGAGC+AGG | 0.563180 | 2.3:-887854 | None:intergenic |
| GTCGGAAGGGGAAGAATATG+TGG | 0.563477 | 2.3:+885454 | MS.gene86424:CDS |
| CCAGAGTTGCAAAAGCTAAG+TGG | 0.563520 | 2.3:+890750 | MS.gene86424:CDS |
| GAATGAAATATCCAATTAGT+GGG | 0.570260 | 2.3:-889840 | None:intergenic |
| AAGAAACTGGCAAGCCCAGA+GGG | 0.571679 | 2.3:+890787 | MS.gene86424:CDS |
| TGAAAAGAAGAAACCAGGCT+CGG | 0.576111 | 2.3:+891004 | MS.gene86424:CDS |
| GATGACAATGATGGTGATGC+TGG | 0.577086 | 2.3:+890954 | MS.gene86424:CDS |
| AGAGTACCGAATTGGAAAGA+GGG | 0.583270 | 2.3:-885501 | None:intergenic |
| ATCAAAGTAGTAGAAGTACT+AGG | 0.585884 | 2.3:+891084 | MS.gene86424:CDS |
| ATTGTTGCAGCTCGTCGGAA+GGG | 0.588802 | 2.3:+885441 | MS.gene86424:CDS |
| TTTCATCACCGCAGGTGGCA+GGG | 0.589885 | 2.3:+890629 | MS.gene86424:CDS |
| ATTGATTTCATCACCGCAGG+TGG | 0.594789 | 2.3:+890624 | MS.gene86424:CDS |
| AGACGATTGTTGCAGCTCGT+CGG | 0.595174 | 2.3:+885436 | MS.gene86424:CDS |
| TCCAGGCAAGGATTCATCCA+CGG | 0.599987 | 2.3:+889476 | MS.gene86424:intron |
| CAAGTTGAAAAGAAGAAACC+AGG | 0.602633 | 2.3:+890999 | MS.gene86424:CDS |
| ATGGCATACCCTGCCACCTG+CGG | 0.606176 | 2.3:-890637 | None:intergenic |
| CCGAATTGGAAAGAGGGAAA+CGG | 0.607478 | 2.3:-885495 | None:intergenic |
| GGTAGAGGCGGCGAGAAGAG+CGG | 0.609449 | 2.3:+885305 | MS.gene86424:CDS |
| AGGCTAGAAGCTATCTGCCG+TGG | 0.612330 | 2.3:-889493 | None:intergenic |
| CAAATCAAAGAAGGGGACGA+AGG | 0.629764 | 2.3:+890878 | MS.gene86424:CDS |
| GCTGGTGCTGTATACATCAA+GGG | 0.640257 | 2.3:+885604 | MS.gene86424:CDS |
| GAAAGTGACGATGACAATGA+TGG | 0.640739 | 2.3:+890945 | MS.gene86424:CDS |
| AAAAGAAGAAACCAGGCTCG+GGG | 0.641315 | 2.3:+891006 | MS.gene86424:CDS |
| GTAGATGATGATAACAATGA+CGG | 0.642794 | 2.3:+890831 | MS.gene86424:CDS |
| GGAGCTACCGGAGGTAGAGG+CGG | 0.644715 | 2.3:+885293 | MS.gene86424:CDS |
| GACTAATAGGAAACAGACCA+AGG | 0.648390 | 2.3:+891028 | MS.gene86424:CDS |
| ACATTGCTGCAGCTAGACGA+TGG | 0.648396 | 2.3:+887786 | MS.gene86424:intron |
| CAGGTCTGCTGTAAATGACG+AGG | 0.648999 | 2.3:+886300 | MS.gene86424:intron |
| AAAGTCTCAAATCAAAGAAG+GGG | 0.649563 | 2.3:+890871 | MS.gene86424:CDS |
| CACAATGCCGGAGCTACCGG+AGG | 0.654051 | 2.3:+885284 | None:intergenic |
| AACAATCGTCTTCCCAACAA+CGG | 0.658793 | 2.3:-885424 | None:intergenic |
| AAAGAAACTGGCAAGCCCAG+AGG | 0.666706 | 2.3:+890786 | MS.gene86424:CDS |
| GATGATGACAAAGTCATCGA+CGG | 0.687773 | 2.3:+885375 | MS.gene86424:CDS |
| AATTGGAAAGAGGGAAACGG+AGG | 0.705743 | 2.3:-885492 | None:intergenic |
| ACTAATAGGAAACAGACCAA+GGG | 0.706167 | 2.3:+891029 | MS.gene86424:CDS |
| GGTCCAAGCTCAGATATGGG+AGG | 0.706462 | 2.3:-887955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAATTATTTATTATT+AGG | + | chr2.3:889281-889300 | MS.gene86424:intron | 0.0% |
| !! | TTATTTATTATTAGGAATTA+AGG | + | chr2.3:889289-889308 | MS.gene86424:intron | 10.0% |
| !! | AAATTATAAATGTTTGGATT+TGG | - | chr2.3:890582-890601 | None:intergenic | 15.0% |
| !! | AATAAAAAACTTTGAATACT+TGG | - | chr2.3:886338-886357 | None:intergenic | 15.0% |
| !! | ACATGAAAATTATAAATGTT+TGG | - | chr2.3:890588-890607 | None:intergenic | 15.0% |
| !! | CTATAATATAATCAATTTCT+TGG | + | chr2.3:890486-890505 | MS.gene86424:intron | 15.0% |
| !! | CTGTAAAATAAATTTATTTG+TGG | - | chr2.3:889775-889794 | None:intergenic | 15.0% |
| !! | TAGAAATAAATAAAAGATGA+TGG | - | chr2.3:890691-890710 | None:intergenic | 15.0% |
| !! | TTAACTATATGATGATATAA+TGG | + | chr2.3:888498-888517 | MS.gene86424:intron | 15.0% |
| !! | TTTAACATTATTGAGAAAAT+GGG | + | chr2.3:886738-886757 | MS.gene86424:intron | 15.0% |
| !! | TTTCAATTCTATATCAAAAA+AGG | - | chr2.3:889048-889067 | None:intergenic | 15.0% |
| !!! | AATCAATTTACTACAATTTT+AGG | - | chr2.3:890019-890038 | None:intergenic | 15.0% |
| !!! | ATCAATTTACTACAATTTTA+GGG | - | chr2.3:890018-890037 | None:intergenic | 15.0% |
| !!! | CACAAATAAATTTATTTTAC+AGG | + | chr2.3:889773-889792 | MS.gene86424:intron | 15.0% |
| !!! | CTAGATTTTTATAATTCAAT+TGG | + | chr2.3:889113-889132 | MS.gene86424:intron | 15.0% |
| !!! | TTTATTTTTAACTCAAAGTA+GGG | - | chr2.3:889909-889928 | None:intergenic | 15.0% |
| !!! | TTTTAACATTATTGAGAAAA+TGG | + | chr2.3:886737-886756 | MS.gene86424:intron | 15.0% |
| !!! | TTTTATTTTTAACTCAAAGT+AGG | - | chr2.3:889910-889929 | None:intergenic | 15.0% |
| !!! | TTTTGATATAGAATTGAAAT+CGG | + | chr2.3:889049-889068 | MS.gene86424:intron | 15.0% |
| !! | AAAATACATGGAAAATATCA+AGG | - | chr2.3:888393-888412 | None:intergenic | 20.0% |
| !! | AAATCTAATGACTTCAAATT+TGG | - | chr2.3:887527-887546 | None:intergenic | 20.0% |
| !! | AATGGCATACATATAATAAA+AGG | + | chr2.3:888864-888883 | MS.gene86424:intron | 20.0% |
| !! | AATTGAACATAATTCACATT+TGG | - | chr2.3:885737-885756 | None:intergenic | 20.0% |
| !! | ACAGAAATCAAAAATGTAAA+GGG | - | chr2.3:888208-888227 | None:intergenic | 20.0% |
| !! | ATAGACTAATATCATATACT+TGG | + | chr2.3:888579-888598 | MS.gene86424:intron | 20.0% |
| !! | ATATCAAACTCTTATTAGTA+TGG | - | chr2.3:887899-887918 | None:intergenic | 20.0% |
| !! | ATGGCATACATATAATAAAA+GGG | + | chr2.3:888865-888884 | MS.gene86424:intron | 20.0% |
| !! | CATTTGTTCATATAATATGT+AGG | - | chr2.3:890542-890561 | None:intergenic | 20.0% |
| !! | GTGTTCTTAACTTATTATTT+GGG | + | chr2.3:889007-889026 | MS.gene86424:intron | 20.0% |
| !! | TAAAAGAAAAGAAACCAATA+TGG | - | chr2.3:888650-888669 | None:intergenic | 20.0% |
| !! | TCAAATAAAAAACATAGCAT+CGG | - | chr2.3:886444-886463 | None:intergenic | 20.0% |
| !! | TGTAAATTTAAATACGCAAA+TGG | + | chr2.3:885992-886011 | MS.gene86424:intron | 20.0% |
| !! | TGTGTTCTTAACTTATTATT+TGG | + | chr2.3:889006-889025 | MS.gene86424:intron | 20.0% |
| !! | TTAACATTATTGAGAAAATG+GGG | + | chr2.3:886739-886758 | MS.gene86424:intron | 20.0% |
| !! | TTTATTATTAGGAATTAAGG+AGG | + | chr2.3:889292-889311 | MS.gene86424:intron | 20.0% |
| !!! | AACTTTAAGTGTTTTCATTA+GGG | + | chr2.3:886113-886132 | MS.gene86424:intron | 20.0% |
| !!! | AGTTTGTTGGATATTATTTT+GGG | + | chr2.3:887275-887294 | MS.gene86424:intron | 20.0% |
| !!! | ATTTACATTTTCATACTACA+CGG | - | chr2.3:885979-885998 | None:intergenic | 20.0% |
| !!! | GTATTCAAAGTTTTTTATTC+AGG | + | chr2.3:886339-886358 | MS.gene86424:CDS | 20.0% |
| !!! | TAACGAAGTTTTAATATTTG+TGG | + | chr2.3:890191-890210 | MS.gene86424:intron | 20.0% |
| !!! | TAACTTTAAGTGTTTTCATT+AGG | + | chr2.3:886112-886131 | MS.gene86424:intron | 20.0% |
| !!! | TATTTTAACAATATCTCCAA+CGG | - | chr2.3:887440-887459 | None:intergenic | 20.0% |
| !!! | TTTAGCCTCTATATTTTTTA+TGG | - | chr2.3:889614-889633 | None:intergenic | 20.0% |
| !!! | TTTTAATTCTCATCTAAACT+TGG | + | chr2.3:888462-888481 | MS.gene86424:intron | 20.0% |
| ! | AAAAACTTTGAATACTTGGA+AGG | - | chr2.3:886334-886353 | None:intergenic | 25.0% |
| ! | AAAATGAAATAACCACTCAA+GGG | - | chr2.3:889691-889710 | None:intergenic | 25.0% |
| ! | AAGTATCTATTTGTTCAATC+TGG | - | chr2.3:888682-888701 | None:intergenic | 25.0% |
| ! | AATGATAGTTTATTAGTCAC+TGG | - | chr2.3:889388-889407 | None:intergenic | 25.0% |
| ! | AGACTCCATAAAAAATATAG+AGG | + | chr2.3:889606-889625 | MS.gene86424:intron | 25.0% |
| ! | ATAAACTATCATTCTAGCAT+TGG | + | chr2.3:889395-889414 | MS.gene86424:intron | 25.0% |
| ! | ATACAATAAGTTATAAGGCA+TGG | - | chr2.3:889446-889465 | None:intergenic | 25.0% |
| ! | ATTCAATTGGTCAAACAATT+AGG | + | chr2.3:889126-889145 | MS.gene86424:intron | 25.0% |
| ! | CAAAATAATATCCAACAAAC+TGG | - | chr2.3:887276-887295 | None:intergenic | 25.0% |
| ! | CAATTCTATATCAAAAAAGG+TGG | - | chr2.3:889045-889064 | None:intergenic | 25.0% |
| ! | CACAGAAATCAAAAATGTAA+AGG | - | chr2.3:888209-888228 | None:intergenic | 25.0% |
| ! | GAAACATGATATTGTAAAAC+TGG | - | chr2.3:885928-885947 | None:intergenic | 25.0% |
| ! | GAATGAAATATCCAATTAGT+GGG | - | chr2.3:889843-889862 | None:intergenic | 25.0% |
| ! | GGGAAATACAATAAGTTATA+AGG | - | chr2.3:889451-889470 | None:intergenic | 25.0% |
| ! | GTAAATATAAACTTCTTCAC+AGG | + | chr2.3:886281-886300 | MS.gene86424:intron | 25.0% |
| ! | TAAATAAAGGTTAGATGTCA+TGG | - | chr2.3:886835-886854 | None:intergenic | 25.0% |
| ! | TAATACCTTCAAAACAATCA+AGG | - | chr2.3:890246-890265 | None:intergenic | 25.0% |
| ! | TAATATATAGTAGTCACAGA+TGG | - | chr2.3:886575-886594 | None:intergenic | 25.0% |
| ! | TACTTTCATGTTACATACTA+TGG | + | chr2.3:887351-887370 | MS.gene86424:intron | 25.0% |
| ! | TATGATGATATAATGGCTAA+TGG | + | chr2.3:888505-888524 | MS.gene86424:intron | 25.0% |
| ! | TCCATAGTTAACAAAATACA+TGG | - | chr2.3:888405-888424 | None:intergenic | 25.0% |
| ! | TCTATATAAGTGCATTAAAG+AGG | + | chr2.3:889537-889556 | MS.gene86424:CDS | 25.0% |
| ! | TCTTCACTTTAACATGTATA+CGG | + | chr2.3:887093-887112 | MS.gene86424:intron | 25.0% |
| ! | TGGCATACATATAATAAAAG+GGG | + | chr2.3:888866-888885 | MS.gene86424:intron | 25.0% |
| ! | TTATGCTCTTATGTATGAAA+TGG | - | chr2.3:887611-887630 | None:intergenic | 25.0% |
| ! | TTGCTGTAACAAAGTATAAA+AGG | + | chr2.3:885629-885648 | MS.gene86424:CDS | 25.0% |
| ! | TTGGTGTGATTTACTATTAT+TGG | + | chr2.3:890107-890126 | MS.gene86424:intron | 25.0% |
| ! | TTTGTTCAGAAGAAATGTAT+TGG | + | chr2.3:888773-888792 | MS.gene86424:intron | 25.0% |
| !! | AACTTGAACATTCAAAGTTT+TGG | - | chr2.3:886717-886736 | None:intergenic | 25.0% |
| !! | ATAATTTTCATGTGATTGCA+GGG | + | chr2.3:890595-890614 | MS.gene86424:intron | 25.0% |
| !! | TACTTTTCTTGTCAATTACA+AGG | + | chr2.3:886647-886666 | MS.gene86424:intron | 25.0% |
| !! | TATAATTTTCATGTGATTGC+AGG | + | chr2.3:890594-890613 | MS.gene86424:intron | 25.0% |
| !! | TCAAACAATTAGGAACATTT+TGG | + | chr2.3:889136-889155 | MS.gene86424:intron | 25.0% |
| !! | TCAAGGATTTAAAATCATTG+AGG | - | chr2.3:888376-888395 | None:intergenic | 25.0% |
| !! | TCCATGTATTTTGTTAACTA+TGG | + | chr2.3:888401-888420 | MS.gene86424:intron | 25.0% |
| !! | TTCATACATAAGAGCATAAT+CGG | + | chr2.3:887612-887631 | MS.gene86424:intron | 25.0% |
| !!! | ATTTTAACAATATCTCCAAC+GGG | - | chr2.3:887439-887458 | None:intergenic | 25.0% |
| !!! | CAGTTTGTTGGATATTATTT+TGG | + | chr2.3:887274-887293 | MS.gene86424:intron | 25.0% |
| !!! | CTTTTTTGTCAAGATTTTGT+TGG | + | chr2.3:885947-885966 | MS.gene86424:intron | 25.0% |
| !!! | GTTTGTTGGATATTATTTTG+GGG | + | chr2.3:887276-887295 | MS.gene86424:intron | 25.0% |
| !!! | TTATACCTTGATTGTTTTGA+AGG | + | chr2.3:890238-890257 | MS.gene86424:intron | 25.0% |
| !!! | TTTTTGCTGTAAAATAGCTA+TGG | + | chr2.3:887191-887210 | MS.gene86424:intron | 25.0% |
| AAAAAGCCTGGAAAAATAAG+TGG | + | chr2.3:889720-889739 | MS.gene86424:intron | 30.0% | |
| AAACTAGGTTATTAACCTGT+TGG | + | chr2.3:886917-886936 | MS.gene86424:intron | 30.0% | |
| AAAGTCTCAAATCAAAGAAG+GGG | + | chr2.3:890871-890890 | MS.gene86424:CDS | 30.0% | |
| AAATGAAATAACCACTCAAG+GGG | - | chr2.3:889690-889709 | None:intergenic | 30.0% | |
| AAGAAAAGAAACCAATATGG+AGG | - | chr2.3:888647-888666 | None:intergenic | 30.0% | |
| AAGAAGAAACGTGAACAATT+TGG | - | chr2.3:888902-888921 | None:intergenic | 30.0% | |
| AATAAGAGCAATGTTCAGAA+TGG | - | chr2.3:890659-890678 | None:intergenic | 30.0% | |
| AATATTCCCCTTATAAGACT+TGG | + | chr2.3:887456-887475 | MS.gene86424:intron | 30.0% | |
| ACAGATATTGTCCAAAATGT+AGG | + | chr2.3:886672-886691 | MS.gene86424:intron | 30.0% | |
| AGCTCAATACCATAGTAAAA+GGG | - | chr2.3:889967-889986 | None:intergenic | 30.0% | |
| AGTTACAAGCATAAATCGTA+AGG | - | chr2.3:885572-885591 | None:intergenic | 30.0% | |
| ATAAGTGCATTAAAGAGGTA+GGG | + | chr2.3:889542-889561 | MS.gene86424:intron | 30.0% | |
| ATCATTCCCCAATAATATGA+AGG | - | chr2.3:890163-890182 | None:intergenic | 30.0% | |
| ATCTTCACAATGCTTTCAAA+AGG | + | chr2.3:890379-890398 | MS.gene86424:intron | 30.0% | |
| ATGACATTGTTTGATTCATG+AGG | + | chr2.3:889202-889221 | MS.gene86424:intron | 30.0% | |
| ATGTATAAAGTTCAAACTGC+AGG | - | chr2.3:887558-887577 | None:intergenic | 30.0% | |
| ATTCACTAAAAGCTCTTTAG+AGG | + | chr2.3:886797-886816 | MS.gene86424:intron | 30.0% | |
| ATTCGTCTATTTGATCTTCA+AGG | - | chr2.3:887029-887048 | None:intergenic | 30.0% | |
| CAAACTCAGATGTAAAGTTA+TGG | + | chr2.3:886064-886083 | MS.gene86424:intron | 30.0% | |
| CAAGAAGAAAACTGAAATCA+AGG | + | chr2.3:888029-888048 | MS.gene86424:CDS | 30.0% | |
| CAATCAAGAATGCAAGTTTA+GGG | - | chr2.3:890090-890109 | None:intergenic | 30.0% | |
| CATAACTTTACATCTGAGTT+TGG | - | chr2.3:886066-886085 | None:intergenic | 30.0% | |
| CTTCACTTTAACATGTATAC+GGG | + | chr2.3:887094-887113 | MS.gene86424:intron | 30.0% | |
| GAAAATGAAATAACCACTCA+AGG | - | chr2.3:889692-889711 | None:intergenic | 30.0% | |
| GAAAGTCTCAAATCAAAGAA+GGG | + | chr2.3:890870-890889 | MS.gene86424:CDS | 30.0% | |
| GGAATGAAATATCCAATTAG+TGG | - | chr2.3:889844-889863 | None:intergenic | 30.0% | |
| GTAACAAAGTATAAAAGGTG+AGG | + | chr2.3:885634-885653 | MS.gene86424:intron | 30.0% | |
| GTAAGATTCTGATTACATTC+AGG | + | chr2.3:887155-887174 | MS.gene86424:intron | 30.0% | |
| GTAGATGATGATAACAATGA+CGG | + | chr2.3:890831-890850 | MS.gene86424:CDS | 30.0% | |
| GTTAAAAAAAGTCAAATGCG+AGG | - | chr2.3:887585-887604 | None:intergenic | 30.0% | |
| TAATAGTTGCTAACAGCTTA+TGG | - | chr2.3:889086-889105 | None:intergenic | 30.0% | |
| TACATCCATACATGATTTCA+TGG | + | chr2.3:886611-886630 | MS.gene86424:intron | 30.0% | |
| TATAAGTGCATTAAAGAGGT+AGG | + | chr2.3:889541-889560 | MS.gene86424:intron | 30.0% | |
| TATATTTCCTTCTGTGTAGT+GGG | + | chr2.3:886144-886163 | MS.gene86424:intron | 30.0% | |
| TATTGATCCTATAACACATC+TGG | - | chr2.3:890444-890463 | None:intergenic | 30.0% | |
| TCACAAGTGTTAAAAGAAAC+TGG | + | chr2.3:890774-890793 | MS.gene86424:CDS | 30.0% | |
| TCCTGGTGTACTATAAATAA+AGG | - | chr2.3:886848-886867 | None:intergenic | 30.0% | |
| TCTTCACAATGCTTTCAAAA+GGG | + | chr2.3:890380-890399 | MS.gene86424:intron | 30.0% | |
| TTATATTTCCTTCTGTGTAG+TGG | + | chr2.3:886143-886162 | MS.gene86424:intron | 30.0% | |
| TTCAAAAAGAAAAAAGACCG+AGG | + | chr2.3:890923-890942 | MS.gene86424:CDS | 30.0% | |
| TTTATGCTTGTAACTGTGTT+AGG | + | chr2.3:885577-885596 | MS.gene86424:intron | 30.0% | |
| ! | ACCTTTATTTATAGTACACC+AGG | + | chr2.3:886844-886863 | MS.gene86424:intron | 30.0% |
| ! | ATTGTATTTCCCTTATTTCC+AGG | + | chr2.3:889459-889478 | MS.gene86424:intron | 30.0% |
| ! | CTTTAAGAGATTTGATCGTT+AGG | + | chr2.3:888919-888938 | MS.gene86424:intron | 30.0% |
| ! | GTTTTATCATGAATCTTGTC+CGG | - | chr2.3:889179-889198 | None:intergenic | 30.0% |
| ! | TAGAAGGTATAGAACAAACT+AGG | + | chr2.3:886902-886921 | MS.gene86424:intron | 30.0% |
| ! | TATATTTCTGTGAAGCAGAA+GGG | + | chr2.3:887131-887150 | MS.gene86424:intron | 30.0% |
| ! | TTTTATCTAGTCCTCCATAT+TGG | + | chr2.3:888633-888652 | MS.gene86424:intron | 30.0% |
| ! | TTTTTGTTAGAGTTGACGAA+TGG | + | chr2.3:887067-887086 | MS.gene86424:intron | 30.0% |
| !! | AGTGGTTATTTCATTTTCGA+TGG | + | chr2.3:889694-889713 | MS.gene86424:intron | 30.0% |
| !! | ATATTTCAGGCATTGGAAAT+TGG | + | chr2.3:888307-888326 | MS.gene86424:CDS | 30.0% |
| !! | ATCAAAGTAGTAGAAGTACT+AGG | + | chr2.3:891084-891103 | MS.gene86424:CDS | 30.0% |
| !! | ATCTACACTTGTTTTCTTTG+AGG | - | chr2.3:890817-890836 | None:intergenic | 30.0% |
| !! | GTGGTTATTTCATTTTCGAT+GGG | + | chr2.3:889695-889714 | MS.gene86424:intron | 30.0% |
| !! | TACATTCAGGTTGTAAGTTT+AGG | + | chr2.3:887168-887187 | MS.gene86424:intron | 30.0% |
| !! | TATTTCAGGCATTGGAAATT+GGG | + | chr2.3:888308-888327 | MS.gene86424:CDS | 30.0% |
| !! | TGGTTATTTCATTTTCGATG+GGG | + | chr2.3:889696-889715 | MS.gene86424:intron | 30.0% |
| !! | TTGATCTTCAAGGTATTGTA+TGG | - | chr2.3:887019-887038 | None:intergenic | 30.0% |
| !! | TTTGAAAGCATTGTGAAGAT+TGG | - | chr2.3:890379-890398 | None:intergenic | 30.0% |
| !! | TTTTGGAAATAGCATTTCAC+TGG | + | chr2.3:889329-889348 | MS.gene86424:intron | 30.0% |
| !!! | AGGAACATTTTGGAATCAAA+TGG | + | chr2.3:889146-889165 | MS.gene86424:intron | 30.0% |
| !!! | ATTTATTTTGTGTCTGTGTG+TGG | + | chr2.3:888839-888858 | MS.gene86424:intron | 30.0% |
| !!! | GTTTTGGAAAATATTCGTGT+TGG | - | chr2.3:886701-886720 | None:intergenic | 30.0% |
| !!! | TCGGTCTTTTTTCTTTTTGA+AGG | - | chr2.3:890924-890943 | None:intergenic | 30.0% |
| !!! | TTTATTTTGTGTCTGTGTGT+GGG | + | chr2.3:888840-888859 | MS.gene86424:intron | 30.0% |
| AAATGAAAGATCCGCTTACT+TGG | - | chr2.3:888353-888372 | None:intergenic | 35.0% | |
| AACTTTACCACTTGTGTCTT+TGG | + | chr2.3:886399-886418 | MS.gene86424:intron | 35.0% | |
| ACTAATAGGAAACAGACCAA+GGG | + | chr2.3:891029-891048 | MS.gene86424:CDS | 35.0% | |
| ACTTTACCACTTGTGTCTTT+GGG | + | chr2.3:886400-886419 | MS.gene86424:intron | 35.0% | |
| AGCTCATTGAGATTTGAGTA+TGG | - | chr2.3:886205-886224 | None:intergenic | 35.0% | |
| ATATAGAGGCTAAAACCTGT+AGG | + | chr2.3:889620-889639 | MS.gene86424:intron | 35.0% | |
| ATATTGCATCAGCAAGATGA+TGG | + | chr2.3:888610-888629 | MS.gene86424:intron | 35.0% | |
| ATCGTAAGGATTATGAAGCT+AGG | - | chr2.3:885558-885577 | None:intergenic | 35.0% | |
| ATCTGTACCAGATGTGTTAT+AGG | + | chr2.3:890434-890453 | MS.gene86424:intron | 35.0% | |
| ATGGATGACAATTTGCAAGT+AGG | - | chr2.3:887880-887899 | None:intergenic | 35.0% | |
| CAATCAAAGAAACGTGTTCA+AGG | + | chr2.3:891059-891078 | MS.gene86424:CDS | 35.0% | |
| CAGCTCAATACCATAGTAAA+AGG | - | chr2.3:889968-889987 | None:intergenic | 35.0% | |
| CCAATCAAGAATGCAAGTTT+AGG | - | chr2.3:890091-890110 | None:intergenic | 35.0% | |
| CCTAAACTTGCATTCTTGAT+TGG | + | chr2.3:890088-890107 | MS.gene86424:intron | 35.0% | |
| CCTGTAGGTTATTCAATTTG+CGG | + | chr2.3:889635-889654 | MS.gene86424:intron | 35.0% | |
| CTATTTGTTCAATCTGGTCA+AGG | - | chr2.3:888676-888695 | None:intergenic | 35.0% | |
| GGAAAGTCTCAAATCAAAGA+AGG | + | chr2.3:890869-890888 | MS.gene86424:CDS | 35.0% | |
| GTAGTCAATATCCCACTAAT+TGG | + | chr2.3:889829-889848 | MS.gene86424:CDS | 35.0% | |
| GTTCTATACCTTCTAAGCAA+GGG | - | chr2.3:886897-886916 | None:intergenic | 35.0% | |
| GTTTATATCCCTTGCTTAGA+AGG | + | chr2.3:886886-886905 | MS.gene86424:intron | 35.0% | |
| TAACCACTGAGAGAACTTAT+AGG | - | chr2.3:886259-886278 | None:intergenic | 35.0% | |
| TCGAAAAAGCAGTTGAAGTT+GGG | + | chr2.3:889799-889818 | MS.gene86424:CDS | 35.0% | |
| TCGTAAGGATTATGAAGCTA+GGG | - | chr2.3:885557-885576 | None:intergenic | 35.0% | |
| TGAATGATGACAAACTGAAG+TGG | + | chr2.3:886464-886483 | MS.gene86424:intron | 35.0% | |
| TGCAGCAATGTGATTTAATC+TGG | - | chr2.3:887777-887796 | None:intergenic | 35.0% | |
| TGGATGACAATTTGCAAGTA+GGG | - | chr2.3:887879-887898 | None:intergenic | 35.0% | |
| TGTTCTATACCTTCTAAGCA+AGG | - | chr2.3:886898-886917 | None:intergenic | 35.0% | |
| TTATTAGGAATTAAGGAGGC+AGG | + | chr2.3:889296-889315 | MS.gene86424:intron | 35.0% | |
| ! | AGAGTGCCTTCATATTATTG+GGG | + | chr2.3:890154-890173 | MS.gene86424:intron | 35.0% |
| ! | CAAGTTGAAAAGAAGAAACC+AGG | + | chr2.3:890999-891018 | MS.gene86424:CDS | 35.0% |
| ! | CAGAGTGCCTTCATATTATT+GGG | + | chr2.3:890153-890172 | MS.gene86424:intron | 35.0% |
| ! | CATTCTTGTTTCCAGTTTGT+TGG | + | chr2.3:887262-887281 | MS.gene86424:intron | 35.0% |
| ! | CTATATTTCTGTGAAGCAGA+AGG | + | chr2.3:887130-887149 | MS.gene86424:intron | 35.0% |
| ! | GTATTCCAGTTTGAAACTCA+CGG | + | chr2.3:890290-890309 | MS.gene86424:intron | 35.0% |
| ! | TATTCCAGTTTGAAACTCAC+GGG | + | chr2.3:890291-890310 | MS.gene86424:intron | 35.0% |
| ! | TGAATCGTACCCTTTTACTA+TGG | + | chr2.3:889955-889974 | MS.gene86424:intron | 35.0% |
| ! | TGAATGGTCTGAAATCTAGT+TGG | + | chr2.3:888721-888740 | MS.gene86424:intron | 35.0% |
| !! | GGTTATTTCATTTTCGATGG+GGG | + | chr2.3:889697-889716 | MS.gene86424:intron | 35.0% |
| !! | TTAACGGGAAAGGTTTTTAG+AGG | + | chr2.3:889235-889254 | MS.gene86424:intron | 35.0% |
| !!! | TGTTGGATATTATTTTGGGG+CGG | + | chr2.3:887279-887298 | MS.gene86424:intron | 35.0% |
| AACAATCGTCTTCCCAACAA+CGG | - | chr2.3:885427-885446 | None:intergenic | 40.0% | |
| AACGTGAACAATTTGGACAG+TGG | - | chr2.3:888895-888914 | None:intergenic | 40.0% | |
| AATTCGAAGCTTCCGTTGTT+GGG | + | chr2.3:885412-885431 | MS.gene86424:CDS | 40.0% | |
| ACACCTATAAGTTCTCTCAG+TGG | + | chr2.3:886253-886272 | MS.gene86424:intron | 40.0% | |
| ACATTGGCAACTTCAACTGA+TGG | + | chr2.3:886968-886987 | MS.gene86424:intron | 40.0% | |
| ACCATCAACAAAAGCTTTGC+CGG | - | chr2.3:889880-889899 | None:intergenic | 40.0% | |
| ACTGGATTTAGTATCTGCTC+TGG | + | chr2.3:889347-889366 | MS.gene86424:intron | 40.0% | |
| AGATACTTGTTCACGTCATC+AGG | + | chr2.3:888694-888713 | MS.gene86424:intron | 40.0% | |
| AGTAAACTCGTCAAGTGTCA+TGG | - | chr2.3:887998-888017 | None:intergenic | 40.0% | |
| AGTAGCCTGTATGTTAGACT+TGG | + | chr2.3:886541-886560 | MS.gene86424:intron | 40.0% | |
| AGTATAAAAGGTGAGGCCAA+TGG | + | chr2.3:885641-885660 | MS.gene86424:intron | 40.0% | |
| ATAACCACTCAAGGGGAAAA+CGG | - | chr2.3:889683-889702 | None:intergenic | 40.0% | |
| CAAGGTTAACGATACTCCAT+TGG | - | chr2.3:885660-885679 | None:intergenic | 40.0% | |
| CAGAGCTATATTTCAGGCAT+TGG | + | chr2.3:888300-888319 | MS.gene86424:intron | 40.0% | |
| CATAGCATTCTGCTCATCAA+AGG | - | chr2.3:886379-886398 | None:intergenic | 40.0% | |
| CCGCAAATTGAATAACCTAC+AGG | - | chr2.3:889638-889657 | None:intergenic | 40.0% | |
| CGAAAAAGCAGTTGAAGTTG+GGG | + | chr2.3:889800-889819 | MS.gene86424:CDS | 40.0% | |
| CTCAGATGTAAAGTTATGGC+AGG | + | chr2.3:886068-886087 | MS.gene86424:intron | 40.0% | |
| CTGGATTTAGTATCTGCTCT+GGG | + | chr2.3:889348-889367 | MS.gene86424:intron | 40.0% | |
| CTGTAAATGACGAGGATGAA+TGG | + | chr2.3:886308-886327 | MS.gene86424:CDS | 40.0% | |
| GAAAGTGACGATGACAATGA+TGG | + | chr2.3:890945-890964 | MS.gene86424:CDS | 40.0% | |
| GAATCCTTGCCTGGAAATAA+GGG | - | chr2.3:889471-889490 | None:intergenic | 40.0% | |
| GACTAATAGGAAACAGACCA+AGG | + | chr2.3:891028-891047 | MS.gene86424:CDS | 40.0% | |
| GAGTATAACGTGTGAAGTAG+AGG | - | chr2.3:885856-885875 | None:intergenic | 40.0% | |
| GATGATGACAAAGTCATCGA+CGG | + | chr2.3:885375-885394 | MS.gene86424:CDS | 40.0% | |
| GCTTCTACTACCTAACACAT+TGG | + | chr2.3:886952-886971 | MS.gene86424:intron | 40.0% | |
| GCTTGTAACTGTGTTAGGTA+TGG | + | chr2.3:885582-885601 | MS.gene86424:intron | 40.0% | |
| GTAAACTCGTCAAGTGTCAT+GGG | - | chr2.3:887997-888016 | None:intergenic | 40.0% | |
| GTAGCCTGTATGTTAGACTT+GGG | + | chr2.3:886542-886561 | MS.gene86424:intron | 40.0% | |
| GTCACAATACATCTTTGAGC+AGG | - | chr2.3:887857-887876 | None:intergenic | 40.0% | |
| GTCGAAAAAGCAGTTGAAGT+TGG | + | chr2.3:889798-889817 | MS.gene86424:CDS | 40.0% | |
| GTCGATGACTTTGTCATCAT+CGG | - | chr2.3:885376-885395 | None:intergenic | 40.0% | |
| GTTGAAGTTGCCAATGTGTT+AGG | - | chr2.3:886965-886984 | None:intergenic | 40.0% | |
| TCGCACCATGAAATCATGTA+TGG | - | chr2.3:886619-886638 | None:intergenic | 40.0% | |
| TGAAAAGAAGAAACCAGGCT+CGG | + | chr2.3:891004-891023 | MS.gene86424:CDS | 40.0% | |
| TGAATCCTTGCCTGGAAATA+AGG | - | chr2.3:889472-889491 | None:intergenic | 40.0% | |
| TTCAAAAGGGTTTCCGAAAG+TGG | + | chr2.3:890393-890412 | MS.gene86424:intron | 40.0% | |
| ! | AAAAGTTGGCTCAAGGAATG+AGG | - | chr2.3:887487-887506 | None:intergenic | 40.0% |
| ! | AAATATAGCTCTGCAGAGGA+TGG | - | chr2.3:888293-888312 | None:intergenic | 40.0% |
| ! | AGCTGTCTTTTACCGACAAA+AGG | + | chr2.3:887814-887833 | MS.gene86424:CDS | 40.0% |
| ! | AGGATAGGCCAAGTCTTATA+AGG | - | chr2.3:887467-887486 | None:intergenic | 40.0% |
| ! | AGGCAGGAGCTTCAAATTTT+TGG | + | chr2.3:889312-889331 | MS.gene86424:intron | 40.0% |
| ! | ATGAGAACATCAGCCACTTT+CGG | - | chr2.3:890409-890428 | None:intergenic | 40.0% |
| ! | ATGAGGCCAATGCTACTTAA+CGG | + | chr2.3:889219-889238 | MS.gene86424:intron | 40.0% |
| ! | ATGATTGATTTCATCACCGC+AGG | + | chr2.3:890621-890640 | MS.gene86424:CDS | 40.0% |
| ! | ATGGGATCAAAAAGTGCATC+AGG | - | chr2.3:887979-887998 | None:intergenic | 40.0% |
| ! | ATTCCTTGAGCCAACTTTTG+GGG | + | chr2.3:887488-887507 | MS.gene86424:intron | 40.0% |
| ! | ATTGTCATCGTCACTTTCCT+CGG | - | chr2.3:890943-890962 | None:intergenic | 40.0% |
| ! | ATTTCCCTTATTTCCAGGCA+AGG | + | chr2.3:889464-889483 | MS.gene86424:intron | 40.0% |
| ! | CATTCCTTGAGCCAACTTTT+GGG | + | chr2.3:887487-887506 | MS.gene86424:intron | 40.0% |
| ! | CCAGAGTGCCTTCATATTAT+TGG | + | chr2.3:890152-890171 | MS.gene86424:intron | 40.0% |
| ! | GATAGGCCAAGTCTTATAAG+GGG | - | chr2.3:887465-887484 | None:intergenic | 40.0% |
| ! | GGATAGGCCAAGTCTTATAA+GGG | - | chr2.3:887466-887485 | None:intergenic | 40.0% |
| ! | GGTCTGAAATCTAGTTGGAA+CGG | + | chr2.3:888726-888745 | MS.gene86424:intron | 40.0% |
| ! | GTCTGAAATCTAGTTGGAAC+GGG | + | chr2.3:888727-888746 | MS.gene86424:intron | 40.0% |
| ! | TAAGAAGTGTGAGTGCAACA+AGG | - | chr2.3:885678-885697 | None:intergenic | 40.0% |
| ! | TCATTCCTTGAGCCAACTTT+TGG | + | chr2.3:887486-887505 | MS.gene86424:intron | 40.0% |
| ! | TCTAGCAAATCGCCTTTTGT+CGG | - | chr2.3:887829-887848 | None:intergenic | 40.0% |
| !! | AGAGTACCGAATTGGAAAGA+GGG | - | chr2.3:885504-885523 | None:intergenic | 40.0% |
| !! | CCAATAATATGAAGGCACTC+TGG | - | chr2.3:890155-890174 | None:intergenic | 40.0% |
| !! | TCCTCACCACTTATTTTTCC+AGG | - | chr2.3:889729-889748 | None:intergenic | 40.0% |
| !! | TGTTAGGTAGTAGAAGCACT+TGG | - | chr2.3:886949-886968 | None:intergenic | 40.0% |
| !!! | TGATGTTTTAGTGTTGCGTC+TGG | + | chr2.3:885789-885808 | MS.gene86424:intron | 40.0% |
| AAAAGAAGAAACCAGGCTCG+GGG | + | chr2.3:891006-891025 | MS.gene86424:CDS | 45.0% | |
| AACAATATCTCCAACGGGTG+TGG | - | chr2.3:887434-887453 | None:intergenic | 45.0% | |
| AAGTTGTGCCTCTGTGCTTA+GGG | + | chr2.3:887639-887658 | MS.gene86424:intron | 45.0% | |
| AATTGGAAAGAGGGAAACGG+AGG | - | chr2.3:885495-885514 | None:intergenic | 45.0% | |
| ACAATATCTCCAACGGGTGT+GGG | - | chr2.3:887433-887452 | None:intergenic | 45.0% | |
| ACATTGTGTGATCAGAGTCC+TGG | - | chr2.3:886865-886884 | None:intergenic | 45.0% | |
| AGCACTTGGCTTAATCCAAC+AGG | - | chr2.3:886935-886954 | None:intergenic | 45.0% | |
| AGCATCATTGTTCCTCAGGA+AGG | - | chr2.3:888951-888970 | None:intergenic | 45.0% | |
| ATCAGGTCCAAGCTCAGATA+TGG | - | chr2.3:887962-887981 | None:intergenic | 45.0% | |
| ATGGGGAGAGTGAACATGTT+TGG | + | chr2.3:886756-886775 | MS.gene86424:intron | 45.0% | |
| CAAATCAAAGAAGGGGACGA+AGG | + | chr2.3:890878-890897 | MS.gene86424:CDS | 45.0% | |
| CACGTCATCAGGATTGTGAA+TGG | + | chr2.3:888705-888724 | MS.gene86424:intron | 45.0% | |
| CATTAAAGAGGTAGGGATGC+TGG | + | chr2.3:889549-889568 | MS.gene86424:intron | 45.0% | |
| CCAGAGTTGCAAAAGCTAAG+TGG | + | chr2.3:890750-890769 | MS.gene86424:CDS | 45.0% | |
| CCATCAACAAAAGCTTTGCC+GGG | - | chr2.3:889879-889898 | None:intergenic | 45.0% | |
| CCGAATTGGAAAGAGGGAAA+CGG | - | chr2.3:885498-885517 | None:intergenic | 45.0% | |
| CCGTTTCCCTCTTTCCAATT+CGG | + | chr2.3:885495-885514 | MS.gene86424:CDS | 45.0% | |
| CCTCTGCAGAGCTATATTTC+AGG | + | chr2.3:888294-888313 | MS.gene86424:intron | 45.0% | |
| CCTTTCCCGTTAAGTAGCAT+TGG | - | chr2.3:889228-889247 | None:intergenic | 45.0% | |
| CTAGCCCAAGTCTAACATAC+AGG | - | chr2.3:886549-886568 | None:intergenic | 45.0% | |
| CTATGGTGAAAGCTTGTGTC+AGG | + | chr2.3:887208-887227 | MS.gene86424:intron | 45.0% | |
| CTTTGATTGCTTCTCTCCCT+TGG | - | chr2.3:891048-891067 | None:intergenic | 45.0% | |
| GAAAAGAAGAAACCAGGCTC+GGG | + | chr2.3:891005-891024 | MS.gene86424:CDS | 45.0% | |
| GAATTCGAAGCTTCCGTTGT+TGG | + | chr2.3:885411-885430 | MS.gene86424:CDS | 45.0% | |
| GCCTGGAAAAATAAGTGGTG+AGG | + | chr2.3:889725-889744 | MS.gene86424:intron | 45.0% | |
| GCTAACTCAACCCCAAAAGT+TGG | - | chr2.3:887501-887520 | None:intergenic | 45.0% | |
| GGAATCAAATGGTCTGTCAC+CGG | + | chr2.3:889157-889176 | MS.gene86424:intron | 45.0% | |
| GTAACAGAGCTTGACTCAAC+AGG | - | chr2.3:890322-890341 | None:intergenic | 45.0% | |
| GTAACCCGTGAGTTTCAAAC+TGG | - | chr2.3:890298-890317 | None:intergenic | 45.0% | |
| GTAACTGTGTTAGGTATGGC+TGG | + | chr2.3:885586-885605 | MS.gene86424:intron | 45.0% | |
| TACAAGCCCAAAGACACAAG+TGG | - | chr2.3:886409-886428 | None:intergenic | 45.0% | |
| TCAGGTCCAAGCTCAGATAT+GGG | - | chr2.3:887961-887980 | None:intergenic | 45.0% | |
| TTGGCTCAAGGAATGAGGAT+AGG | - | chr2.3:887482-887501 | None:intergenic | 45.0% | |
| ! | ACAGAGCATCATTGTTCCTC+AGG | - | chr2.3:888955-888974 | None:intergenic | 45.0% |
| ! | ATTGATTTCATCACCGCAGG+TGG | + | chr2.3:890624-890643 | MS.gene86424:CDS | 45.0% |
| ! | ATTTCCTTCTGTGTAGTGGG+TGG | + | chr2.3:886147-886166 | MS.gene86424:intron | 45.0% |
| ! | CCAATGCTACTTAACGGGAA+AGG | + | chr2.3:889225-889244 | MS.gene86424:intron | 45.0% |
| ! | CCTGAAATATAGCTCTGCAG+AGG | - | chr2.3:888297-888316 | None:intergenic | 45.0% |
| ! | GATGACAATGATGGTGATGC+TGG | + | chr2.3:890954-890973 | MS.gene86424:CDS | 45.0% |
| ! | TGAGGCCAATGCTACTTAAC+GGG | + | chr2.3:889220-889239 | MS.gene86424:intron | 45.0% |
| !! | ACGGGAAAGGTTTTTAGAGG+TGG | + | chr2.3:889238-889257 | MS.gene86424:intron | 45.0% |
| !! | AGAGAGAGAGAGTACCGAAT+TGG | - | chr2.3:885512-885531 | None:intergenic | 45.0% |
| !! | CCACTTAGCTTTTGCAACTC+TGG | - | chr2.3:890753-890772 | None:intergenic | 45.0% |
| !! | CGTGTTGGTGTCCTACATTT+TGG | - | chr2.3:886686-886705 | None:intergenic | 45.0% |
| !! | CTGAAGTGGACTATTTGCTG+TGG | + | chr2.3:886478-886497 | MS.gene86424:intron | 45.0% |
| !! | GAAGTGCTGTACCAAGTAAG+CGG | + | chr2.3:888339-888358 | MS.gene86424:intron | 45.0% |
| !! | GAGAGTACCGAATTGGAAAG+AGG | - | chr2.3:885505-885524 | None:intergenic | 45.0% |
| !! | GCTGGTGCTGTATACATCAA+GGG | + | chr2.3:885604-885623 | MS.gene86424:CDS | 45.0% |
| !! | GGAAAGGTTTTTAGAGGTGG+TGG | + | chr2.3:889241-889260 | MS.gene86424:intron | 45.0% |
| !! | TTCTTTGAGGCTTTCCCTCT+GGG | - | chr2.3:890804-890823 | None:intergenic | 45.0% |
| !! | TTTCTTTGAGGCTTTCCCTC+TGG | - | chr2.3:890805-890824 | None:intergenic | 45.0% |
| !! | ACAAATTAAAAATTTATATT+TGG | - | chr2.3:888099-888118 | None:intergenic | 5.0% |
| !! | CAAATTAAAAATTTATATTT+GGG | - | chr2.3:888098-888117 | None:intergenic | 5.0% |
| AAAGAAACTGGCAAGCCCAG+AGG | + | chr2.3:890786-890805 | MS.gene86424:CDS | 50.0% | |
| AAGAAACTGGCAAGCCCAGA+GGG | + | chr2.3:890787-890806 | MS.gene86424:CDS | 50.0% | |
| ACATTGCTGCAGCTAGACGA+TGG | + | chr2.3:887786-887805 | MS.gene86424:intron | 50.0% | |
| AGACGATTGTTGCAGCTCGT+CGG | + | chr2.3:885436-885455 | MS.gene86424:CDS | 50.0% | |
| AGTTGTGCCTCTGTGCTTAG+GGG | + | chr2.3:887640-887659 | MS.gene86424:intron | 50.0% | |
| ATCATCGGCGACGATGCATT+TGG | - | chr2.3:885361-885380 | None:intergenic | 50.0% | |
| ATTGTTGCAGCTCGTCGGAA+GGG | + | chr2.3:885441-885460 | MS.gene86424:CDS | 50.0% | |
| CACCGACAAGCGTCAAACAT+CGG | - | chr2.3:885713-885732 | None:intergenic | 50.0% | |
| CAGATAGCTTCTAGCCTGTC+AGG | + | chr2.3:889499-889518 | MS.gene86424:CDS | 50.0% | |
| CAGGTCTGCTGTAAATGACG+AGG | + | chr2.3:886300-886319 | MS.gene86424:intron | 50.0% | |
| CATTCCCGTGAAAAGAAGCC+CGG | + | chr2.3:889858-889877 | MS.gene86424:CDS | 50.0% | |
| CGGTGGAAGAGAACTGTATC+GGG | + | chr2.3:885325-885344 | MS.gene86424:CDS | 50.0% | |
| GAAGTTGTGCCTCTGTGCTT+AGG | + | chr2.3:887638-887657 | MS.gene86424:intron | 50.0% | |
| GACAAATCCCCTAAGCACAG+AGG | - | chr2.3:887650-887669 | None:intergenic | 50.0% | |
| GCGGTGGAAGAGAACTGTAT+CGG | + | chr2.3:885324-885343 | MS.gene86424:CDS | 50.0% | |
| GTCCGATGTTTGACGCTTGT+CGG | + | chr2.3:885708-885727 | MS.gene86424:intron | 50.0% | |
| GTCGGAAGGGGAAGAATATG+TGG | + | chr2.3:885454-885473 | MS.gene86424:CDS | 50.0% | |
| TCCAGGCAAGGATTCATCCA+CGG | + | chr2.3:889476-889495 | MS.gene86424:intron | 50.0% | |
| TGTACCACCCACTACACAGA+AGG | - | chr2.3:886154-886173 | None:intergenic | 50.0% | |
| TTGAGCAGCTTTCTCCTGAC+AGG | - | chr2.3:889516-889535 | None:intergenic | 50.0% | |
| TTGTGTCTGTGTGTGGGCAA+TGG | + | chr2.3:888846-888865 | MS.gene86424:intron | 50.0% | |
| TTTCGATGGGGGAAAAAGCC+TGG | + | chr2.3:889708-889727 | MS.gene86424:intron | 50.0% | |
| ! | CAACCCCAAAAGTTGGCTCA+AGG | - | chr2.3:887494-887513 | None:intergenic | 50.0% |
| ! | CCCGGCAAAGCTTTTGTTGA+TGG | + | chr2.3:889876-889895 | MS.gene86424:CDS | 50.0% |
| ! | CTTTGCCGGGCTTCTTTTCA+CGG | - | chr2.3:889866-889885 | None:intergenic | 50.0% |
| ! | TTTGCCGGGCTTCTTTTCAC+GGG | - | chr2.3:889865-889884 | None:intergenic | 50.0% |
| !! | GATATGGGAGGCACTGATGA+TGG | - | chr2.3:887946-887965 | None:intergenic | 50.0% |
| !! | GGCTGGTGCTGTATACATCA+AGG | + | chr2.3:885603-885622 | MS.gene86424:CDS | 50.0% |
| AACCAGGCTCGGGGACTAAT+AGG | + | chr2.3:891015-891034 | MS.gene86424:CDS | 55.0% | |
| AGGCTAGAAGCTATCTGCCG+TGG | - | chr2.3:889496-889515 | None:intergenic | 55.0% | |
| ATTTCATCACCGCAGGTGGC+AGG | + | chr2.3:890628-890647 | MS.gene86424:CDS | 55.0% | |
| GATTGTTGCAGCTCGTCGGA+AGG | + | chr2.3:885440-885459 | MS.gene86424:CDS | 55.0% | |
| GCTGCAGCTAGACGATGGTT+TGG | + | chr2.3:887791-887810 | MS.gene86424:intron | 55.0% | |
| GGTCCAAGCTCAGATATGGG+AGG | - | chr2.3:887958-887977 | None:intergenic | 55.0% | |
| GTGCCTCCCATATCTGAGCT+TGG | + | chr2.3:887952-887971 | MS.gene86424:CDS | 55.0% | |
| GTTAGGCTGTCACCTTCCTG+AGG | + | chr2.3:888936-888955 | MS.gene86424:intron | 55.0% | |
| TTCCTATTAGTCCCCGAGCC+TGG | - | chr2.3:891020-891039 | None:intergenic | 55.0% | |
| TTGTTGCAGCTCGTCGGAAG+GGG | + | chr2.3:885442-885461 | MS.gene86424:CDS | 55.0% | |
| TTTCATCACCGCAGGTGGCA+GGG | + | chr2.3:890629-890648 | MS.gene86424:CDS | 55.0% | |
| !! | GTAGCCGTTTTCCCCTTGAG+TGG | + | chr2.3:889676-889695 | MS.gene86424:intron | 55.0% |
| !! | TGACGGCGCTGACGAGAATT+TGG | + | chr2.3:890848-890867 | MS.gene86424:CDS | 55.0% |
| ATGGCATACCCTGCCACCTG+CGG | - | chr2.3:890640-890659 | None:intergenic | 60.0% | |
| CGTTGAGATCCCACACCCGT+TGG | + | chr2.3:887421-887440 | MS.gene86424:intron | 60.0% | |
| GCCGTGGATGAATCCTTGCC+TGG | - | chr2.3:889480-889499 | None:intergenic | 60.0% | |
| CTTCTCGCCGCCTCTACCTC+CGG | - | chr2.3:885303-885322 | None:intergenic | 65.0% | |
| GCCTCTACCTCCGGTAGCTC+CGG | - | chr2.3:885294-885313 | None:intergenic | 65.0% | |
| GGAGCTACCGGAGGTAGAGG+CGG | + | chr2.3:885293-885312 | MS.gene86424:CDS | 65.0% | |
| GGTAGAGGCGGCGAGAAGAG+CGG | + | chr2.3:885305-885324 | MS.gene86424:CDS | 65.0% | |
| AGAGGCGGCGAGAAGAGCGG+TGG | + | chr2.3:885308-885327 | MS.gene86424:CDS | 70.0% | |
| GCCGGAGCTACCGGAGGTAG+AGG | + | chr2.3:885290-885309 | MS.gene86424:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 885288 | 891121 | 885288 | ID=MS.gene86424 |
| chr2.3 | mRNA | 885288 | 891121 | 885288 | ID=MS.gene86424.t1;Parent=MS.gene86424 |
| chr2.3 | exon | 885288 | 885516 | 885288 | ID=MS.gene86424.t1.exon1;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 885288 | 885516 | 885288 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 885599 | 885650 | 885599 | ID=MS.gene86424.t1.exon2;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 885599 | 885650 | 885599 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 886303 | 886360 | 886303 | ID=MS.gene86424.t1.exon3;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 886303 | 886360 | 886303 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 887798 | 887866 | 887798 | ID=MS.gene86424.t1.exon4;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 887798 | 887866 | 887798 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 887943 | 888068 | 887943 | ID=MS.gene86424.t1.exon5;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 887943 | 888068 | 887943 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 888303 | 888353 | 888303 | ID=MS.gene86424.t1.exon6;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 888303 | 888353 | 888303 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 889481 | 889558 | 889481 | ID=MS.gene86424.t1.exon7;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 889481 | 889558 | 889481 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 889795 | 889897 | 889795 | ID=MS.gene86424.t1.exon8;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 889795 | 889897 | 889795 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 890616 | 890650 | 890616 | ID=MS.gene86424.t1.exon9;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 890616 | 890650 | 890616 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| chr2.3 | exon | 890735 | 891121 | 890735 | ID=MS.gene86424.t1.exon10;Parent=MS.gene86424.t1 |
| chr2.3 | CDS | 890735 | 891121 | 890735 | ID=cds.MS.gene86424.t1;Parent=MS.gene86424.t1 |
| Gene Sequence |
| Protein sequence |
