AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene86637

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86637.t1 MTR_2g097020 78.066 693 123 6 1 690 1 667 0.0 1055
MS.gene86637.t1 MTR_2g095400 78.468 692 92 7 1 690 1 637 0.0 1009
MS.gene86637.t1 MTR_2g097010 75.145 692 156 4 1 690 1 678 0.0 953
MS.gene86637.t1 MTR_4g046643 74.298 677 146 7 1 673 1 653 0.0 947
MS.gene86637.t1 MTR_2g097000 70.398 402 89 5 305 690 2 389 2.80e-180 518
MS.gene86637.t1 MTR_3g067815 38.081 688 350 15 10 685 13 636 2.87e-138 420
MS.gene86637.t1 MTR_4g126200 76.136 264 49 3 429 690 2 253 8.93e-134 394
MS.gene86637.t1 MTR_5g079940 37.261 679 364 16 21 688 492 1119 2.76e-125 399
MS.gene86637.t1 MTR_4g006760 33.971 680 357 16 21 686 24 625 5.98e-107 338
MS.gene86637.t1 MTR_4g131350 35.036 685 348 19 21 688 77 681 8.61e-106 337
MS.gene86637.t1 MTR_4g125920 34.751 682 354 20 21 688 24 628 2.76e-104 331
MS.gene86637.t1 MTR_3g067855 45.923 233 107 6 457 688 123 337 6.56e-50 178
MS.gene86637.t1 MTR_4g126180 72.650 117 32 0 306 422 3 119 1.55e-45 158
MS.gene86637.t1 MTR_3g067845 37.313 268 147 6 423 688 2 250 6.33e-36 137
MS.gene86637.t1 MTR_8g446460 54.412 136 57 3 9 142 107 239 5.92e-35 135
MS.gene86637.t1 MTR_4g131310 24.449 454 253 12 21 474 24 387 1.01e-24 108
MS.gene86637.t1 MTR_4g131310 60.938 64 25 0 615 678 391 454 4.45e-18 88.2
MS.gene86637.t1 MTR_2g066850 61.176 85 28 3 2 84 66 147 7.52e-21 98.6
MS.gene86637.t1 MTR_2g075630 66.154 65 19 2 2 66 67 128 1.29e-19 89.7
MS.gene86637.t1 MTR_3g067825 45.745 94 46 2 599 688 10 102 5.56e-17 77.8
MS.gene86637.t1 MTR_8g063010 55.696 79 30 3 18 96 57 130 8.28e-16 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene86637.t1 AT1G13790 46.279 551 261 9 135 681 207 726 8.81e-141 429
MS.gene86637.t1 AT1G13790 46.279 551 261 9 135 681 207 726 8.81e-141 429
MS.gene86637.t1 AT3G12550 34.339 696 375 14 13 689 5 637 6.18e-109 343
MS.gene86637.t1 AT3G48670 34.776 670 361 12 32 688 38 644 2.92e-108 342
MS.gene86637.t1 AT3G48670 34.776 670 361 12 32 688 38 644 2.92e-108 342
MS.gene86637.t1 AT3G48670 34.776 670 361 12 32 688 38 644 2.92e-108 342
MS.gene86637.t1 AT3G12550 34.290 697 375 15 13 689 5 638 3.12e-107 339
MS.gene86637.t1 AT3G12550 34.290 697 375 15 13 689 5 638 3.12e-107 339
MS.gene86637.t1 AT3G12550 34.290 697 375 15 13 689 5 638 3.12e-107 339
MS.gene86637.t1 AT1G15910 33.430 691 369 17 16 689 18 634 3.24e-99 318
MS.gene86637.t1 AT5G59390 38.561 542 292 14 148 679 34 544 2.53e-98 313
MS.gene86637.t1 AT5G59390 38.561 542 292 14 148 679 34 544 2.53e-98 313
MS.gene86637.t1 AT5G59390 38.192 542 289 14 148 679 34 539 1.38e-96 309
MS.gene86637.t1 AT5G59390 38.192 542 289 14 148 679 34 539 1.38e-96 309
MS.gene86637.t1 AT5G59390 38.192 542 289 14 148 679 34 539 1.38e-96 309
MS.gene86637.t1 AT4G00380 32.558 688 381 16 15 689 18 635 3.59e-94 305
MS.gene86637.t1 AT4G00380 32.558 688 381 16 15 689 18 635 3.59e-94 305
MS.gene86637.t1 AT4G00380 35.986 553 309 11 147 689 90 607 1.41e-93 302
MS.gene86637.t1 AT1G80790 33.333 687 375 14 15 689 19 634 1.63e-93 303
MS.gene86637.t1 AT1G80790 33.333 687 375 14 15 689 19 634 1.63e-93 303
MS.gene86637.t1 AT4G01180 36.000 575 297 15 130 679 11 539 1.69e-89 290
MS.gene86637.t1 AT3G12550 32.020 609 332 14 16 605 8 553 2.76e-76 256
MS.gene86637.t1 AT4G01780 33.403 476 198 12 215 688 111 469 7.21e-58 203
MS.gene86637.t1 AT1G80790 28.908 467 265 11 15 469 19 430 3.55e-48 176
MS.gene86637.t1 AT3G29375 41.981 212 99 4 478 688 38 226 1.31e-42 154
MS.gene86637.t1 AT3G29375 41.981 212 99 4 478 688 161 349 1.54e-40 152
MS.gene86637.t1 AT3G29375 36.719 128 60 2 478 605 38 144 2.24e-15 75.1
MS.gene86637.t1 AT2G16490 42.105 76 44 0 614 689 74 149 4.97e-14 71.2

Find 144 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTGCAATTGTTGAATT+TGG 0.070469 6.1:-49732632 MS.gene86637:CDS
ATTTCCATTGCTTAATTAAA+TGG 0.098910 6.1:+49729880 None:intergenic
GGGGATTTGAAAACGGTTTC+TGG 0.111458 6.1:-49732425 MS.gene86637:CDS
TTCATTGGTCTTCAGCTTTA+AGG 0.118185 6.1:+49732346 None:intergenic
CACGAGTATATTCTAAATTT+TGG 0.119844 6.1:+49733233 None:intergenic
GAGACACACGTCCACAATTA+TGG 0.202689 6.1:-49733068 MS.gene86637:CDS
ACTTGATATTAAGCCATTTC+TGG 0.218339 6.1:-49730531 MS.gene86637:CDS
TTCGTTGGTTAATGTGAATT+TGG 0.249953 6.1:-49732840 MS.gene86637:CDS
GGCAAACACCTCCAGGAAAA+AGG 0.252537 6.1:-49732446 MS.gene86637:CDS
TAAGCAATGGAAATCAAATA+AGG 0.267301 6.1:-49729871 MS.gene86637:CDS
GACCGAGGAGATAGACTATT+TGG 0.284076 6.1:-49732512 MS.gene86637:CDS
TAGCTTGAGTGTTGTTCTTT+GGG 0.290615 6.1:+49730579 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.290672 6.1:-49732252 MS.gene86637:CDS
ATAGCTTGAGTGTTGTTCTT+TGG 0.293353 6.1:+49730578 None:intergenic
TAGTCCTTGTTGTAGCAAAA+TGG 0.309878 6.1:+49733112 None:intergenic
CTCTTAGCTGCTTCCAGAAA+TGG 0.310177 6.1:+49730518 None:intergenic
TGTTGTCTGTTCCAATTCAT+TGG 0.315128 6.1:+49732331 None:intergenic
TTTGCTCCATCACTTTCCTT+AGG 0.315993 6.1:+49732282 None:intergenic
ACAGCTGAAAGGAGCTTTCC+AGG 0.321504 6.1:-49731296 MS.gene86637:CDS
TCAACAAACATTGGTTGTTC+AGG 0.328117 6.1:-49731167 MS.gene86637:CDS
AATTCCAGAGTTCCGGTATT+GGG 0.334900 6.1:+49729943 None:intergenic
AATTAAAACCTGTAGATAAT+AGG 0.336196 6.1:+49731455 None:intergenic
AGCGGGATTACTTGGGTTTA+CGG 0.339146 6.1:-49732541 MS.gene86637:CDS
GCAGGCTGAACGTGAGTATC+AGG 0.344377 6.1:-49732016 MS.gene86637:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.352913 6.1:-49731203 MS.gene86637:CDS
TCTTTAAAATTCCAGAGTTC+CGG 0.355321 6.1:+49729936 None:intergenic
CTGTGGTAAGCGGGATTACT+TGG 0.359149 6.1:-49732549 MS.gene86637:CDS
ATATACTCGTGAATCTGATT+TGG 0.366588 6.1:-49733221 MS.gene86637:CDS
TTGCTCCATCACTTTCCTTA+GGG 0.374227 6.1:+49732283 None:intergenic
GAAGGATCCAACGAAAATTA+AGG 0.375245 6.1:-49732723 MS.gene86637:CDS
TCGTTGGTTAATGTGAATTT+GGG 0.376063 6.1:-49732839 MS.gene86637:CDS
CTCTAATGTGATTCATTACC+TGG 0.385645 6.1:+49731278 None:intergenic
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 6.1:-49730034 MS.gene86637:CDS
AAACAAGCTTGTCTCTGGTT+TGG 0.392657 6.1:-49732375 MS.gene86637:CDS
AAAGCTGAAGACCAATGAAT+TGG 0.393547 6.1:-49732342 MS.gene86637:CDS
ATGCTTGAACATTTCAATAA+GGG 0.393919 6.1:-49732251 MS.gene86637:intron
GAAAAGAAGCCGAGGACAAT+AGG 0.397047 6.1:-49732403 MS.gene86637:CDS
TTTCCATTGCTTAATTAAAT+GGG 0.397793 6.1:+49729881 None:intergenic
TGCAAAACAAGCATTGGAAT+TGG 0.398690 6.1:-49731326 MS.gene86637:CDS
ACTGCATTGTGGAACCTTCA+TGG 0.403384 6.1:-49732662 MS.gene86637:CDS
AAGCTATAATTTCTGTGAAA+AGG 0.426145 6.1:-49730562 MS.gene86637:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 6.1:-49730035 MS.gene86637:CDS
CAGAATGGAGCTGCAGGAAA+AGG 0.433632 6.1:-49731218 MS.gene86637:CDS
AAATTCCAGAGTTCCGGTAT+TGG 0.433634 6.1:+49729942 None:intergenic
AAAGCAAACAAGCTTGTCTC+TGG 0.443077 6.1:-49732380 MS.gene86637:CDS
AGGAGGAGCTGATTATGAAA+GGG 0.447751 6.1:-49732703 MS.gene86637:CDS
TGAAAAGCTGAAAAGTTTGA+AGG 0.453713 6.1:-49730045 MS.gene86637:CDS
TTGCATCCAGTCCTCTCTCC+AGG 0.453963 6.1:+49731344 None:intergenic
GTTTGCTTTCCTATTGTCCT+CGG 0.455452 6.1:+49732394 None:intergenic
CTTCTTCTCAAAATATAGCT+TGG 0.458126 6.1:+49731876 None:intergenic
AGTCCTTGTTGTAGCAAAAT+GGG 0.460972 6.1:+49733113 None:intergenic
AAGCAATGGAAATCAAATAA+GGG 0.461528 6.1:-49729870 MS.gene86637:CDS
ATTGTTTGTTCATAGTGGAT+TGG 0.465199 6.1:-49730605 MS.gene86637:intron
GTATCAGGAGAAAGTATCTA+AGG 0.470579 6.1:-49732001 MS.gene86637:CDS
AGACACACGTCCACAATTAT+GGG 0.471468 6.1:-49733067 MS.gene86637:CDS
CCAGTCTGGAGCTGGAAGTT+CGG 0.471555 6.1:-49731966 MS.gene86637:CDS
AGCAATCAGAATGGAGCTGC+AGG 0.472823 6.1:-49731224 MS.gene86637:CDS
TGAAAATGCCAGTCTGGAGC+TGG 0.474792 6.1:-49731974 MS.gene86637:CDS
GGATCATGAAAATGCCAGTC+TGG 0.478798 6.1:-49731980 MS.gene86637:CDS
CAAACTTATATCCCGTGAAA+AGG 0.480262 6.1:-49731938 MS.gene86637:CDS
GACTTATCATTAAGAACAGC+AGG 0.481109 6.1:+49732947 None:intergenic
TATAATTTCTGTGAAAAGGA+TGG 0.482190 6.1:-49730558 MS.gene86637:CDS
TTACTTGGGTTTACGGAAGC+AGG 0.484545 6.1:-49732534 MS.gene86637:CDS
TTTGCAATTGTTGAATTTGG+AGG 0.485072 6.1:-49732629 MS.gene86637:CDS
ACTTTGAACGGATGCCAACT+TGG 0.493862 6.1:+49730377 None:intergenic
TATGATATCAAGGATATAGT+TGG 0.497256 6.1:-49732467 MS.gene86637:CDS
TCCAAATTCAACAATTGCAA+AGG 0.497847 6.1:+49732631 None:intergenic
AGGAAGGAAGGCTTCGTTGA+AGG 0.499099 6.1:-49729913 MS.gene86637:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 6.1:-49730027 MS.gene86637:CDS
AAGGAGGAGCTGATTATGAA+AGG 0.500167 6.1:-49732704 MS.gene86637:CDS
AGCAGAGCACTGTGGTAAGC+GGG 0.500435 6.1:-49732558 MS.gene86637:CDS
GAATGTTGCTAAGGGTTCGT+TGG 0.504072 6.1:-49732855 MS.gene86637:CDS
CCGAACTTCCAGCTCCAGAC+TGG 0.505605 6.1:+49731966 None:intergenic
CACAATGCAGTAACTTTCAT+CGG 0.507323 6.1:+49732674 None:intergenic
ACTTGTTAAGAATGTTGCTA+AGG 0.507417 6.1:-49732864 MS.gene86637:CDS
TTATCAGTTACAACTTTGAA+CGG 0.511127 6.1:+49730365 None:intergenic
TATAGTTGGCAAACACCTCC+AGG 0.512464 6.1:-49732453 MS.gene86637:CDS
GGTATTGGGTACCGACCACT+AGG 0.514631 6.1:+49729957 None:intergenic
AGATAGACTATTTGGTTGGA+TGG 0.515691 6.1:-49732504 MS.gene86637:CDS
CCGTGATGACTATGATATCA+AGG 0.517522 6.1:-49732477 MS.gene86637:CDS
ATGAGTTGTTTGTATATCCA+TGG 0.518192 6.1:-49732805 MS.gene86637:CDS
CCAAATTCAACAATTGCAAA+GGG 0.521084 6.1:+49732632 None:intergenic
TTTCCCATTTAATTAAGCAA+TGG 0.524848 6.1:-49729884 MS.gene86637:CDS
ACTGGATGCAAAACAAGCAT+TGG 0.525557 6.1:-49731332 MS.gene86637:CDS
GGCAATAGCAGAGCAACAAA+AGG 0.526117 6.1:-49731532 MS.gene86637:CDS
ACAATGCTATGAAGTTAGAA+AGG 0.526734 6.1:-49732589 MS.gene86637:CDS
AGCTATGGTGATGTTAAAGT+TGG 0.527340 6.1:-49732983 MS.gene86637:CDS
GTATTTGGCAGAAGAACATA+AGG 0.527594 6.1:-49731493 MS.gene86637:CDS
CTTGTTAAGAATGTTGCTAA+GGG 0.530987 6.1:-49732863 MS.gene86637:CDS
GGTACCCAATACCGGAACTC+TGG 0.532850 6.1:-49729947 MS.gene86637:CDS
AAAGTTGTAACTGATAAAGA+AGG 0.540435 6.1:-49730359 MS.gene86637:CDS
TGTGGTAAGCGGGATTACTT+GGG 0.540703 6.1:-49732548 MS.gene86637:CDS
AGAAATCAGCAAGATGCGGC+AGG 0.543540 6.1:-49732034 MS.gene86637:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.545043 6.1:-49730557 MS.gene86637:CDS
GAGGAGATAGACTATTTGGT+TGG 0.547176 6.1:-49732508 MS.gene86637:CDS
TCATGACCTGGAGAGAGGAC+TGG 0.550277 6.1:-49731350 MS.gene86637:CDS
GGAAGATCTTCAACAAACAT+TGG 0.550560 6.1:-49731176 MS.gene86637:CDS
CAATCGAGTGGTGCTCTAAG+TGG 0.554447 6.1:-49730418 MS.gene86637:CDS
CAAAGGGTAATTGTCCATGA+AGG 0.557538 6.1:+49732648 None:intergenic
TAGTGGTCGGTACCCAATAC+CGG 0.557758 6.1:-49729955 MS.gene86637:CDS
AAAATTGGAAGCAATCAGAA+TGG 0.559788 6.1:-49731233 MS.gene86637:CDS
TTTCTAACTTCATAGCATTG+TGG 0.565243 6.1:+49732591 None:intergenic
AAGGAAGGCTTCGTTGAAGG+AGG 0.570974 6.1:-49729910 MS.gene86637:CDS
CGATGAAAGTTACTGCATTG+TGG 0.575718 6.1:-49732673 MS.gene86637:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.576364 6.1:-49731212 MS.gene86637:CDS
AATCGAGTGGTGCTCTAAGT+GGG 0.579307 6.1:-49730417 MS.gene86637:CDS
GAATTTGGAGGACAGTGGGA+TGG 0.580172 6.1:-49732617 MS.gene86637:CDS
AAGTAGAAAGTATGTTGCGA+AGG 0.580726 6.1:-49732741 MS.gene86637:CDS
ATGAGGCGAAAGTGTCCCTA+AGG 0.584555 6.1:-49732298 MS.gene86637:CDS
GAAAAGGAAGAGGAATTAGA+GGG 0.585875 6.1:-49731202 MS.gene86637:CDS
AACCAAATAGTCTATCTCCT+CGG 0.588801 6.1:+49732510 None:intergenic
AAAATTCATGACCTGGAGAG+AGG 0.591924 6.1:-49731355 MS.gene86637:CDS
CTTGAAAGATGATTACTACA+AGG 0.592695 6.1:-49733170 MS.gene86637:CDS
ATGCAAGTCACCCATAATTG+TGG 0.592779 6.1:+49733057 None:intergenic
TGTTGAATTTGGAGGACAGT+GGG 0.592870 6.1:-49732621 MS.gene86637:CDS
CCTTGATATCATAGTCATCA+CGG 0.593405 6.1:+49732477 None:intergenic
AGTGTCCCTAAGGAAAGTGA+TGG 0.598158 6.1:-49732288 MS.gene86637:CDS
GACTAAGAGAAAACTTTCAG+AGG 0.605987 6.1:-49730456 MS.gene86637:CDS
TGCAGTAGCTACAACTCTGA+AGG 0.607260 6.1:-49729997 MS.gene86637:CDS
TCACAAGAAAATTCATGACC+TGG 0.607531 6.1:-49731362 MS.gene86637:CDS
ACTGTGTTAAAGATCCAAGT+TGG 0.608444 6.1:-49730391 MS.gene86637:CDS
TTGGAGATTGAACAGCTGAA+AGG 0.614196 6.1:-49731307 MS.gene86637:CDS
TAGCAGAGCACTGTGGTAAG+CGG 0.623837 6.1:-49732559 MS.gene86637:CDS
GACAACAAGCAAACATCATG+AGG 0.628408 6.1:-49732315 MS.gene86637:CDS
AGAAAATAAAAGCAATCGAG+TGG 0.630270 6.1:-49730430 MS.gene86637:CDS
TATGGGTGACTTGCATGAGA+CGG 0.630733 6.1:-49733050 MS.gene86637:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.635228 6.1:-49731553 MS.gene86637:intron
GTCTGGAGCTGGAAGTTCGG+AGG 0.636966 6.1:-49731963 MS.gene86637:CDS
AGGAAGGCTTCGTTGAAGGA+GGG 0.636979 6.1:-49729909 MS.gene86637:CDS
GTTGTTTGTATATCCATGGA+TGG 0.639733 6.1:-49732801 MS.gene86637:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 6.1:-49730033 MS.gene86637:CDS
AAAGGAAGAGGAATTAGAGG+GGG 0.645418 6.1:-49731200 MS.gene86637:CDS
TGATAAAGAAGGAAACTCCA+AGG 0.654804 6.1:-49730348 MS.gene86637:intron
AAAAGGAAGAGGAATTAGAG+GGG 0.657317 6.1:-49731201 MS.gene86637:CDS
TTGTTGAATTTGGAGGACAG+TGG 0.666479 6.1:-49732622 MS.gene86637:CDS
GAAATGTATATTGAAAGCTA+TGG 0.667871 6.1:-49732998 MS.gene86637:CDS
ATGAGTACAACCCTAGTGGT+CGG 0.671880 6.1:-49729968 MS.gene86637:CDS
GGTTTCTGGAAAAGAAGCCG+AGG 0.676719 6.1:-49732411 MS.gene86637:CDS
GGTTTACGGAAGCAGGACCG+AGG 0.677434 6.1:-49732527 MS.gene86637:CDS
CATTAGAAATCAGCAAGATG+CGG 0.680318 6.1:-49732038 MS.gene86637:intron
GGATCCAACGAAAATTAAGG+AGG 0.684524 6.1:-49732720 MS.gene86637:CDS
TTAAATGAGTACAACCCTAG+TGG 0.705810 6.1:-49729972 MS.gene86637:CDS
GTATTGGGTACCGACCACTA+GGG 0.725721 6.1:+49729958 None:intergenic
AGCTTTCTAGCAGAGCACTG+TGG 0.773857 6.1:-49732566 MS.gene86637:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAGTTATTAAAAAATAAG+AGG + chr6.1:49731495-49731514 None:intergenic 10.0%
!! TAAGTTATTAAAAAATAAGA+GGG + chr6.1:49731494-49731513 None:intergenic 10.0%
!!! TATGATATTTTAATATTTCA+TGG - chr6.1:49731006-49731025 MS.gene86637:intron 10.0%
!! AAATTGAATTGATCTAATAT+TGG - chr6.1:49730877-49730896 MS.gene86637:intron 15.0%
!!! ATTTTGAAAAATATTGTTAC+TGG - chr6.1:49730316-49730335 MS.gene86637:intron 15.0%
!!! TACTAATATATCTATGATTT+TGG - chr6.1:49730941-49730960 MS.gene86637:intron 15.0%
!!! TTTACATTTTATGTGAAAAT+TGG - chr6.1:49732394-49732413 MS.gene86637:CDS 15.0%
!! AATTAAAACCTGTAGATAAT+AGG + chr6.1:49731640-49731659 None:intergenic 20.0%
!! ATATGTTAGATATATTTCAC+AGG - chr6.1:49733005-49733024 MS.gene86637:CDS 20.0%
!! ATTTATGCTTAGATTTAACA+AGG + chr6.1:49732062-49732081 None:intergenic 20.0%
!! ATTTCCATTGCTTAATTAAA+TGG + chr6.1:49733215-49733234 None:intergenic 20.0%
!! CAATTAGAAAGAATAGTAAT+TGG - chr6.1:49732885-49732904 MS.gene86637:CDS 20.0%
!! TATTAAAAAATAAGAGGGAT+TGG + chr6.1:49731489-49731508 None:intergenic 20.0%
!! TTAAATCTAAGCATAAATGT+AGG - chr6.1:49732064-49732083 MS.gene86637:intron 20.0%
!! TTTCCATTGCTTAATTAAAT+GGG + chr6.1:49733214-49733233 None:intergenic 20.0%
!!! AAACATTCAAATCATGTTTT+TGG - chr6.1:49732154-49732173 MS.gene86637:intron 20.0%
!!! ATACACTTATTAACTTTTTG+CGG + chr6.1:49731982-49732001 None:intergenic 20.0%
! AAAGTTGTAACTGATAAAGA+AGG - chr6.1:49732733-49732752 MS.gene86637:CDS 25.0%
! AAGCAATGGAAATCAAATAA+GGG - chr6.1:49733222-49733241 MS.gene86637:CDS 25.0%
! AAGCTATAATTTCTGTGAAA+AGG - chr6.1:49732530-49732549 MS.gene86637:CDS 25.0%
! AATTTACAGGAGAACTAAAT+TGG - chr6.1:49731375-49731394 MS.gene86637:CDS 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr6.1:49732535-49732554 MS.gene86637:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr6.1:49730841-49730860 MS.gene86637:intron 25.0%
! ATTCCTTAGATATAGAAACT+AGG + chr6.1:49732262-49732281 None:intergenic 25.0%
! ATTTCATTGTTTGTTCATAG+TGG - chr6.1:49732482-49732501 MS.gene86637:CDS 25.0%
! GAAATGTATATTGAAAGCTA+TGG - chr6.1:49730094-49730113 MS.gene86637:intron 25.0%
! GATTTGAATGTTTGCAAAAT+AGG + chr6.1:49732147-49732166 None:intergenic 25.0%
! TAAGCAATGGAAATCAAATA+AGG - chr6.1:49733221-49733240 MS.gene86637:CDS 25.0%
! TATAATTTCTGTGAAAAGGA+TGG - chr6.1:49732534-49732553 MS.gene86637:CDS 25.0%
! TATGATATCAAGGATATAGT+TGG - chr6.1:49730625-49730644 MS.gene86637:intron 25.0%
! TATGTGAAAATTGGTAGAAT+CGG - chr6.1:49732403-49732422 MS.gene86637:CDS 25.0%
! TCGTGAAAAAATGATGTATT+TGG - chr6.1:49731584-49731603 MS.gene86637:intron 25.0%
! TCTAGATGAGAAGAAAAAAT+TGG - chr6.1:49731844-49731863 MS.gene86637:intron 25.0%
! TTATCAGTTACAACTTTGAA+CGG + chr6.1:49732730-49732749 None:intergenic 25.0%
! TTTCCCATTTAATTAAGCAA+TGG - chr6.1:49733208-49733227 MS.gene86637:CDS 25.0%
! TTTGAAAGTGATCAATTTAC+AGG - chr6.1:49731362-49731381 MS.gene86637:CDS 25.0%
!! ACTTTGTAAAAGATTGGTTA+CGG + chr6.1:49732010-49732029 None:intergenic 25.0%
!! ATGTATATACTTGAGTTTTG+AGG - chr6.1:49731667-49731686 MS.gene86637:intron 25.0%
!! ATTTCACAGGAAATTTTAGA+CGG - chr6.1:49733018-49733037 MS.gene86637:CDS 25.0%
!! ATTTTATGCAGTTCATAGAA+GGG + chr6.1:49732975-49732994 None:intergenic 25.0%
!! CACGAGTATATTCTAAATTT+TGG + chr6.1:49729862-49729881 None:intergenic 25.0%
!! TAAATTGGCTTCTTCAAAAA+TGG - chr6.1:49731390-49731409 MS.gene86637:intron 25.0%
!! TAACCAATCTTTTACAAAGT+CGG - chr6.1:49732010-49732029 MS.gene86637:CDS 25.0%
!! TACACTTATTAACTTTTTGC+GGG + chr6.1:49731981-49732000 None:intergenic 25.0%
!! TATTTTATGCAGTTCATAGA+AGG + chr6.1:49732976-49732995 None:intergenic 25.0%
!! TTCATTTTCCTATTATCTAC+AGG - chr6.1:49731629-49731648 MS.gene86637:intron 25.0%
!!! ATTCCTTCTCATTGATTTAA+AGG - chr6.1:49730901-49730920 MS.gene86637:intron 25.0%
!!! CAACATACTTTCTACTTTTT+GGG + chr6.1:49730348-49730367 None:intergenic 25.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr6.1:49733057-49733076 MS.gene86637:CDS 30.0%
AAAATTGGAAGCAATCAGAA+TGG - chr6.1:49731859-49731878 MS.gene86637:intron 30.0%
AATAGTAATTGGTACTGTGT+AGG - chr6.1:49732896-49732915 MS.gene86637:CDS 30.0%
AATGCTGCATTATATGCTTT+AGG + chr6.1:49732859-49732878 None:intergenic 30.0%
ACAATGCTATGAAGTTAGAA+AGG - chr6.1:49730503-49730522 MS.gene86637:CDS 30.0%
ACTTGATATTAAGCCATTTC+TGG - chr6.1:49732561-49732580 MS.gene86637:CDS 30.0%
AGAAAATAAAAGCAATCGAG+TGG - chr6.1:49732662-49732681 MS.gene86637:CDS 30.0%
ATAGTAATTGGTACTGTGTA+GGG - chr6.1:49732897-49732916 MS.gene86637:CDS 30.0%
ATATACTCGTGAATCTGATT+TGG - chr6.1:49729871-49729890 MS.gene86637:CDS 30.0%
ATGAGTTGTTTGTATATCCA+TGG - chr6.1:49730287-49730306 MS.gene86637:intron 30.0%
ATGCTGCATTATATGCTTTA+GGG + chr6.1:49732858-49732877 None:intergenic 30.0%
ATGTGAAAATTGGTAGAATC+GGG - chr6.1:49732404-49732423 MS.gene86637:CDS 30.0%
ATTTGATACAAAAGACCGAA+TGG + chr6.1:49731458-49731477 None:intergenic 30.0%
CAGTTCTATTAAGACAATGT+TGG - chr6.1:49732821-49732840 MS.gene86637:CDS 30.0%
CATCCTAGTTTCTATATCTA+AGG - chr6.1:49732256-49732275 MS.gene86637:CDS 30.0%
CCAAATTCAACAATTGCAAA+GGG + chr6.1:49730463-49730482 None:intergenic 30.0%
CTTCTTCTCAAAATATAGCT+TGG + chr6.1:49731219-49731238 None:intergenic 30.0%
CTTGAAAGATGATTACTACA+AGG - chr6.1:49729922-49729941 MS.gene86637:CDS 30.0%
CTTGTTAAGAATGTTGCTAA+GGG - chr6.1:49730229-49730248 MS.gene86637:intron 30.0%
GATGCTTGAACATTTCAATA+AGG - chr6.1:49730840-49730859 MS.gene86637:intron 30.0%
TCACCTTTAAATCAATGAGA+AGG + chr6.1:49730907-49730926 None:intergenic 30.0%
TCCAAATTCAACAATTGCAA+AGG + chr6.1:49730464-49730483 None:intergenic 30.0%
TGAAAAGCTGAAAAGTTTGA+AGG - chr6.1:49733047-49733066 MS.gene86637:CDS 30.0%
TTTCTAACTTCATAGCATTG+TGG + chr6.1:49730504-49730523 None:intergenic 30.0%
TTTGCAATTGTTGAATTTGG+AGG - chr6.1:49730463-49730482 MS.gene86637:CDS 30.0%
! AACCAATCTTTTACAAAGTC+GGG - chr6.1:49732011-49732030 MS.gene86637:CDS 30.0%
! AAGAAGCAGGTAATGTATTT+TGG - chr6.1:49731233-49731252 MS.gene86637:CDS 30.0%
! ACTTGTTAAGAATGTTGCTA+AGG - chr6.1:49730228-49730247 MS.gene86637:intron 30.0%
! CTAACAACACTCTTTTTGAT+TGG + chr6.1:49731417-49731436 None:intergenic 30.0%
! TCGTTGGTTAATGTGAATTT+GGG - chr6.1:49730253-49730272 MS.gene86637:intron 30.0%
! TTCGTTGGTTAATGTGAATT+TGG - chr6.1:49730252-49730271 MS.gene86637:intron 30.0%
!! ATTGTTTGTTCATAGTGGAT+TGG - chr6.1:49732487-49732506 MS.gene86637:CDS 30.0%
!! GAATTTTAAAGAAGGAAGGA+AGG - chr6.1:49733167-49733186 MS.gene86637:CDS 30.0%
!! GCAACATACTTTCTACTTTT+TGG + chr6.1:49730349-49730368 None:intergenic 30.0%
!! TCTGGAATTTTAAAGAAGGA+AGG - chr6.1:49733163-49733182 MS.gene86637:CDS 30.0%
!! TCTTTAAAATTCCAGAGTTC+CGG + chr6.1:49733159-49733178 None:intergenic 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr6.1:49731539-49731558 MS.gene86637:CDS 30.0%
!! TTTTTCAAAATCACCATCCA+TGG + chr6.1:49730307-49730326 None:intergenic 30.0%
!!! GAACTCTGGAATTTTAAAGA+AGG - chr6.1:49733159-49733178 MS.gene86637:CDS 30.0%
!!! TTTTCTCTTAGTCTTAGTTG+CGG + chr6.1:49732629-49732648 None:intergenic 30.0%
AAAAGGAAGAGGAATTAGAG+GGG - chr6.1:49731891-49731910 MS.gene86637:CDS 35.0%
AAAGCTGAAGACCAATGAAT+TGG - chr6.1:49730750-49730769 MS.gene86637:intron 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr6.1:49733058-49733077 MS.gene86637:CDS 35.0%
AACCAAATAGTCTATCTCCT+CGG + chr6.1:49730585-49730604 None:intergenic 35.0%
ACTGTGTTAAAGATCCAAGT+TGG - chr6.1:49732701-49732720 MS.gene86637:CDS 35.0%
AGATAGACTATTTGGTTGGA+TGG - chr6.1:49730588-49730607 MS.gene86637:CDS 35.0%
ATCCCGACTTTGTAAAAGAT+TGG + chr6.1:49732016-49732035 None:intergenic 35.0%
CAAACTTATATCCCGTGAAA+AGG - chr6.1:49731154-49731173 MS.gene86637:CDS 35.0%
CACAATGCAGTAACTTTCAT+CGG + chr6.1:49730421-49730440 None:intergenic 35.0%
CATTAGAAATCAGCAAGATG+CGG - chr6.1:49731054-49731073 MS.gene86637:intron 35.0%
CCCTTTGCAATTGTTGAATT+TGG - chr6.1:49730460-49730479 MS.gene86637:CDS 35.0%
CCTTGATATCATAGTCATCA+CGG + chr6.1:49730618-49730637 None:intergenic 35.0%
CTCTAATGTGATTCATTACC+TGG + chr6.1:49731817-49731836 None:intergenic 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr6.1:49731890-49731909 MS.gene86637:CDS 35.0%
GAAGGATCCAACGAAAATTA+AGG - chr6.1:49730369-49730388 MS.gene86637:CDS 35.0%
GACTAAGAGAAAACTTTCAG+AGG - chr6.1:49732636-49732655 MS.gene86637:CDS 35.0%
GACTTATCATTAAGAACAGC+AGG + chr6.1:49730148-49730167 None:intergenic 35.0%
GGAAAAAGGGGATTTGAAAA+CGG - chr6.1:49730660-49730679 MS.gene86637:intron 35.0%
GGAAGATCTTCAACAAACAT+TGG - chr6.1:49731916-49731935 MS.gene86637:CDS 35.0%
GTATTTGGCAGAAGAACATA+AGG - chr6.1:49731599-49731618 MS.gene86637:intron 35.0%
GTTGTTTGTATATCCATGGA+TGG - chr6.1:49730291-49730310 MS.gene86637:intron 35.0%
TCACAAGAAAATTCATGACC+TGG - chr6.1:49731730-49731749 MS.gene86637:intron 35.0%
TGATAAAGAAGGAAACTCCA+AGG - chr6.1:49732744-49732763 MS.gene86637:CDS 35.0%
TGCTGCATTATATGCTTTAG+GGG + chr6.1:49732857-49732876 None:intergenic 35.0%
TGCTGTTGTTAGCACTTATT+TGG - chr6.1:49732937-49732956 MS.gene86637:CDS 35.0%
TGTTAGCATTCCTTACTCTA+TGG - chr6.1:49731431-49731450 MS.gene86637:intron 35.0%
TGTTGTCTGTTCCAATTCAT+TGG + chr6.1:49730764-49730783 None:intergenic 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr6.1:49733120-49733139 MS.gene86637:CDS 35.0%
! AAGTAGAAAGTATGTTGCGA+AGG - chr6.1:49730351-49730370 MS.gene86637:CDS 35.0%
! AGCTATGGTGATGTTAAAGT+TGG - chr6.1:49730109-49730128 MS.gene86637:intron 35.0%
! AGTCCTTGTTGTAGCAAAAT+GGG + chr6.1:49729982-49730001 None:intergenic 35.0%
! ATAGCTTGAGTGTTGTTCTT+TGG + chr6.1:49732517-49732536 None:intergenic 35.0%
! ATCTTTTACAAAGTCGGGAT+AGG - chr6.1:49732016-49732035 MS.gene86637:CDS 35.0%
! CTTTTGTAGATCCTTTTCAC+GGG + chr6.1:49731168-49731187 None:intergenic 35.0%
! GCTTTTGTAGATCCTTTTCA+CGG + chr6.1:49731169-49731188 None:intergenic 35.0%
! TAGCTTGAGTGTTGTTCTTT+GGG + chr6.1:49732516-49732535 None:intergenic 35.0%
! TAGTCCTTGTTGTAGCAAAA+TGG + chr6.1:49729983-49730002 None:intergenic 35.0%
! TCAACAAACATTGGTTGTTC+AGG - chr6.1:49731925-49731944 MS.gene86637:CDS 35.0%
! TTTTCAAATCCCCTTTTTCC+TGG + chr6.1:49730660-49730679 None:intergenic 35.0%
!! GCTATATTTTGAGAAGAAGC+AGG - chr6.1:49731220-49731239 MS.gene86637:CDS 35.0%
!! GTATCAGGAGAAAGTATCTA+AGG - chr6.1:49731091-49731110 MS.gene86637:intron 35.0%
!! TGCAAAACAAGCATTGGAAT+TGG - chr6.1:49731766-49731785 MS.gene86637:intron 35.0%
!! TTCATTGGTCTTCAGCTTTA+AGG + chr6.1:49730749-49730768 None:intergenic 35.0%
!!! TTGAGTTTTGAGGACTCTTT+TGG - chr6.1:49731677-49731696 MS.gene86637:intron 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr6.1:49731737-49731756 MS.gene86637:intron 40.0%
AAACAAGCTTGTCTCTGGTT+TGG - chr6.1:49730717-49730736 MS.gene86637:intron 40.0%
AAAGCAAACAAGCTTGTCTC+TGG - chr6.1:49730712-49730731 MS.gene86637:intron 40.0%
AAAGGAAGAGGAATTAGAGG+GGG - chr6.1:49731892-49731911 MS.gene86637:CDS 40.0%
AAATTCCAGAGTTCCGGTAT+TGG + chr6.1:49733153-49733172 None:intergenic 40.0%
AACAGCCAATGCAAAACGTT+CGG - chr6.1:49732227-49732246 MS.gene86637:intron 40.0%
AAGGAGGAGCTGATTATGAA+AGG - chr6.1:49730388-49730407 MS.gene86637:CDS 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr6.1:49733059-49733078 MS.gene86637:CDS 40.0%
AATTCCAGAGTTCCGGTATT+GGG + chr6.1:49733152-49733171 None:intergenic 40.0%
ACTGGATGCAAAACAAGCAT+TGG - chr6.1:49731760-49731779 MS.gene86637:intron 40.0%
AGACACACGTCCACAATTAT+GGG - chr6.1:49730025-49730044 MS.gene86637:CDS 40.0%
AGGAGGAGCTGATTATGAAA+GGG - chr6.1:49730389-49730408 MS.gene86637:CDS 40.0%
ATGCAAGTCACCCATAATTG+TGG + chr6.1:49730038-49730057 None:intergenic 40.0%
CAAAGGGTAATTGTCCATGA+AGG + chr6.1:49730447-49730466 None:intergenic 40.0%
CCGTGATGACTATGATATCA+AGG - chr6.1:49730615-49730634 MS.gene86637:intron 40.0%
CGATGAAAGTTACTGCATTG+TGG - chr6.1:49730419-49730438 MS.gene86637:CDS 40.0%
GACAACAAGCAAACATCATG+AGG - chr6.1:49730777-49730796 MS.gene86637:intron 40.0%
GAGGAGATAGACTATTTGGT+TGG - chr6.1:49730584-49730603 MS.gene86637:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr6.1:49731889-49731908 MS.gene86637:CDS 40.0%
GGATCCAACGAAAATTAAGG+AGG - chr6.1:49730372-49730391 MS.gene86637:CDS 40.0%
GTTTGCTTTCCTATTGTCCT+CGG + chr6.1:49730701-49730720 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+CGG - chr6.1:49731440-49731459 MS.gene86637:intron 40.0%
TGTTGAATTTGGAGGACAGT+GGG - chr6.1:49730471-49730490 MS.gene86637:CDS 40.0%
TTCGCGAAGTTATTGTACCT+TGG + chr6.1:49732764-49732783 None:intergenic 40.0%
TTGCTCCATCACTTTCCTTA+GGG + chr6.1:49730812-49730831 None:intergenic 40.0%
TTGGAGATTGAACAGCTGAA+AGG - chr6.1:49731785-49731804 MS.gene86637:intron 40.0%
TTGTTGAATTTGGAGGACAG+TGG - chr6.1:49730470-49730489 MS.gene86637:CDS 40.0%
TTTGCTCCATCACTTTCCTT+AGG + chr6.1:49730813-49730832 None:intergenic 40.0%
! AAACACCGAACGTTTTGCAT+TGG + chr6.1:49732235-49732254 None:intergenic 40.0%
! AGCTCCTCCTTAATTTTCGT+TGG + chr6.1:49730379-49730398 None:intergenic 40.0%
! TTGCCCATTTTGCTACAACA+AGG - chr6.1:49729976-49729995 MS.gene86637:CDS 40.0%
!! CGCATCTTGCTGATTTCTAA+TGG + chr6.1:49731056-49731075 None:intergenic 40.0%
!!! GTTTTGAGGACTCTTTTGGT+TGG - chr6.1:49731681-49731700 MS.gene86637:intron 40.0%
AACAAGCAACCACGTGATTC+AGG + chr6.1:49732312-49732331 None:intergenic 45.0%
AACCACGTGATTCAGGTGAA+AGG + chr6.1:49732305-49732324 None:intergenic 45.0%
ACCGAATGGTCCATAGAGTA+AGG + chr6.1:49731444-49731463 None:intergenic 45.0%
ACTGCATTGTGGAACCTTCA+TGG - chr6.1:49730430-49730449 MS.gene86637:CDS 45.0%
ACTTTGAACGGATGCCAACT+TGG + chr6.1:49732718-49732737 None:intergenic 45.0%
AGCGGGATTACTTGGGTTTA+CGG - chr6.1:49730551-49730570 MS.gene86637:CDS 45.0%
AGTGTCCCTAAGGAAAGTGA+TGG - chr6.1:49730804-49730823 MS.gene86637:intron 45.0%
ATCCTTTCACCTGAATCACG+TGG - chr6.1:49732300-49732319 MS.gene86637:CDS 45.0%
ATGAGTACAACCCTAGTGGT+CGG - chr6.1:49733124-49733143 MS.gene86637:CDS 45.0%
CAAACACCTCCAGGAAAAAG+GGG - chr6.1:49730648-49730667 MS.gene86637:intron 45.0%
CAGGTGAAAGGATGTTGCAT+TGG + chr6.1:49732293-49732312 None:intergenic 45.0%
CTCTTAGCTGCTTCCAGAAA+TGG + chr6.1:49732577-49732596 None:intergenic 45.0%
GAAAAGAAGCCGAGGACAAT+AGG - chr6.1:49730689-49730708 MS.gene86637:intron 45.0%
GAATGTTGCTAAGGGTTCGT+TGG - chr6.1:49730237-49730256 MS.gene86637:intron 45.0%
GACCGAGGAGATAGACTATT+TGG - chr6.1:49730580-49730599 MS.gene86637:CDS 45.0%
GAGACACACGTCCACAATTA+TGG - chr6.1:49730024-49730043 MS.gene86637:CDS 45.0%
GCAAACACCTCCAGGAAAAA+GGG - chr6.1:49730647-49730666 MS.gene86637:intron 45.0%
GGATCATGAAAATGCCAGTC+TGG - chr6.1:49731112-49731131 MS.gene86637:intron 45.0%
GGCAATAGCAGAGCAACAAA+AGG - chr6.1:49731560-49731579 MS.gene86637:intron 45.0%
GGGGATTTGAAAACGGTTTC+TGG - chr6.1:49730667-49730686 MS.gene86637:intron 45.0%
TATAGTTGGCAAACACCTCC+AGG - chr6.1:49730639-49730658 MS.gene86637:intron 45.0%
TGCAGTAGCTACAACTCTGA+AGG - chr6.1:49733095-49733114 MS.gene86637:CDS 45.0%
TGTGGTAAGCGGGATTACTT+GGG - chr6.1:49730544-49730563 MS.gene86637:CDS 45.0%
TTACTTGGGTTTACGGAAGC+AGG - chr6.1:49730558-49730577 MS.gene86637:CDS 45.0%
! AATCGAGTGGTGCTCTAAGT+GGG - chr6.1:49732675-49732694 MS.gene86637:CDS 45.0%
! TATGGGTGACTTGCATGAGA+CGG - chr6.1:49730042-49730061 MS.gene86637:CDS 45.0%
! TCAAATCCCCTTTTTCCTGG+AGG + chr6.1:49730657-49730676 None:intergenic 45.0%
AAGGAAGGCTTCGTTGAAGG+AGG - chr6.1:49733182-49733201 MS.gene86637:CDS 50.0%
ACAGCTGAAAGGAGCTTTCC+AGG - chr6.1:49731796-49731815 MS.gene86637:intron 50.0%
AGAAATCAGCAAGATGCGGC+AGG - chr6.1:49731058-49731077 MS.gene86637:intron 50.0%
AGCAATCAGAATGGAGCTGC+AGG - chr6.1:49731868-49731887 MS.gene86637:intron 50.0%
AGGAAGGAAGGCTTCGTTGA+AGG - chr6.1:49733179-49733198 MS.gene86637:CDS 50.0%
AGGAAGGCTTCGTTGAAGGA+GGG - chr6.1:49733183-49733202 MS.gene86637:CDS 50.0%
CAGAATGGAGCTGCAGGAAA+AGG - chr6.1:49731874-49731893 MS.gene86637:CDS 50.0%
CTGTGGTAAGCGGGATTACT+TGG - chr6.1:49730543-49730562 MS.gene86637:CDS 50.0%
GAATTTGGAGGACAGTGGGA+TGG - chr6.1:49730475-49730494 MS.gene86637:CDS 50.0%
GGCAAACACCTCCAGGAAAA+AGG - chr6.1:49730646-49730665 MS.gene86637:intron 50.0%
TAGTGGTCGGTACCCAATAC+CGG - chr6.1:49733137-49733156 MS.gene86637:CDS 50.0%
! CAATCGAGTGGTGCTCTAAG+TGG - chr6.1:49732674-49732693 MS.gene86637:CDS 50.0%
! GGTTTCTGGAAAAGAAGCCG+AGG - chr6.1:49730681-49730700 MS.gene86637:intron 50.0%
! TGAAAATGCCAGTCTGGAGC+TGG - chr6.1:49731118-49731137 MS.gene86637:CDS 50.0%
!! AGCTTTCTAGCAGAGCACTG+TGG - chr6.1:49730526-49730545 MS.gene86637:CDS 50.0%
!! ATGAGGCGAAAGTGTCCCTA+AGG - chr6.1:49730794-49730813 MS.gene86637:intron 50.0%
!! GTATTGGGTACCGACCACTA+GGG + chr6.1:49733137-49733156 None:intergenic 50.0%
!! TAGCAGAGCACTGTGGTAAG+CGG - chr6.1:49730533-49730552 MS.gene86637:CDS 50.0%
GAAGGATGAGTTCGGGGATG+AGG - chr6.1:49733065-49733084 MS.gene86637:CDS 55.0%
GCAGGCTGAACGTGAGTATC+AGG - chr6.1:49731076-49731095 MS.gene86637:intron 55.0%
GGAAGAGGAATTAGAGGGGG+TGG - chr6.1:49731895-49731914 MS.gene86637:CDS 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr6.1:49731880-49731899 MS.gene86637:CDS 55.0%
GGTACCCAATACCGGAACTC+TGG - chr6.1:49733145-49733164 MS.gene86637:CDS 55.0%
TCATGACCTGGAGAGAGGAC+TGG - chr6.1:49731742-49731761 MS.gene86637:intron 55.0%
TTGCATCCAGTCCTCTCTCC+AGG + chr6.1:49731751-49731770 None:intergenic 55.0%
! CCAGTCTGGAGCTGGAAGTT+CGG - chr6.1:49731126-49731145 MS.gene86637:CDS 55.0%
!! AGCAGAGCACTGTGGTAAGC+GGG - chr6.1:49730534-49730553 MS.gene86637:CDS 55.0%
!! GGTATTGGGTACCGACCACT+AGG + chr6.1:49733138-49733157 None:intergenic 55.0%
CCGAACTTCCAGCTCCAGAC+TGG + chr6.1:49731129-49731148 None:intergenic 60.0%
GGTTTACGGAAGCAGGACCG+AGG - chr6.1:49730565-49730584 MS.gene86637:CDS 60.0%
! GTCTGGAGCTGGAAGTTCGG+AGG - chr6.1:49731129-49731148 MS.gene86637:CDS 60.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 49729854 49733260 49729854 ID=MS.gene86637
chr6.1 mRNA 49729854 49733260 49729854 ID=MS.gene86637.t1;Parent=MS.gene86637
chr6.1 exon 49732252 49733260 49732252 ID=MS.gene86637.t1.exon1;Parent=MS.gene86637.t1
chr6.1 CDS 49732252 49733260 49732252 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
chr6.1 exon 49731873 49732054 49731873 ID=MS.gene86637.t1.exon2;Parent=MS.gene86637.t1
chr6.1 CDS 49731873 49732054 49731873 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
chr6.1 exon 49731464 49731562 49731464 ID=MS.gene86637.t1.exon3;Parent=MS.gene86637.t1
chr6.1 CDS 49731464 49731562 49731464 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
chr6.1 exon 49731117 49731401 49731117 ID=MS.gene86637.t1.exon4;Parent=MS.gene86637.t1
chr6.1 CDS 49731117 49731401 49731117 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
chr6.1 exon 49730349 49730612 49730349 ID=MS.gene86637.t1.exon5;Parent=MS.gene86637.t1
chr6.1 CDS 49730349 49730612 49730349 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
chr6.1 exon 49729854 49730087 49729854 ID=MS.gene86637.t1.exon6;Parent=MS.gene86637.t1
chr6.1 CDS 49729854 49730087 49729854 ID=cds.MS.gene86637.t1;Parent=MS.gene86637.t1
Gene Sequence

>MS.gene86637

ATGTACCAAAATTTAGAATATACTCGTGAATCTGATTTGGAGTACTACAAACGCATATATTACAAAGACTTGAAAGATGATTACTACAAGGACAAACTCAAAATATCTGATTCAACATATCGTTGCCCATTTTGCTACAACAAGGACTACTACTCTTTGAATGAGCTATTGAGACACACGTCCACAATTATGGGTGACTTGCATGAGACGGTTAAAGATATTGCTAAGCATTCAGCTCTTGAAATGTATATTGAAAGCTATGGTGATGTTAAAGTTGGTAAAGATAAGTCTCCTGCTGTTCTTAATGATAAGTCACTTGCTGTTAGTACTGCTAGTGATAAGTCAATTAATTTTAGTATCACTAACGAGAAGTCACTTGTTAAGAATGTTGCTAAGGGTTCGTTGGTTAATGTGAATTTGGGTGATGATGATGATGAGTTGTTTGTATATCCATGGATGGTGATTTTGAAAAATATTGTTACTGGTTTTAACCCAAAAAGTAGAAAGTATGTTGCGAAGGATCCAACGAAAATTAAGGAGGAGCTGATTATGAAAGGGTTTCATCCGATGAAAGTTACTGCATTGTGGAACCTTCATGGACAATTACCCTTTGCAATTGTTGAATTTGGAGGACAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAAAGGAGCTTTCTAGCAGAGCACTGTGGTAAGCGGGATTACTTGGGTTTACGGAAGCAGGACCGAGGAGATAGACTATTTGGTTGGATGGCACGCCGTGATGACTATGATATCAAGGATATAGTTGGCAAACACCTCCAGGAAAAAGGGGATTTGAAAACGGTTTCTGGAAAAGAAGCCGAGGACAATAGGAAAGCAAACAAGCTTGTCTCTGGTTTGGAAAATACCTTAAAGCTGAAGACCAATGAATTGGAACAGACAACAAGCAAACATCATGAGGCGAAAGTGTCCCTAAGGAAAGTGATGGAGCAAAAAGAGAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAATTAAATTGAATTGATCTAATATTGGTATTCCTTCTCATTGATTTAAAGGTGAAACATTATCATTTTTACTAATATATCTATGATTTTGGTTAGCTTACATTCTATTGCATTTTCGAATGATTTATAGTTGATATGATATTTTAATATTTCATGGTAGCTGAGTCTGTTTCATATTGTTCCATTAGAAATCAGCAAGATGCGGCAGGCTGAACGTGAGTATCAGGAGAAAGTATCTAAGGATCATGAAAATGCCAGTCTGGAGCTGGAAGTTCGGAGGAACAAACTTATATCCCGTGAAAAGGATCTACAAAAGCATCAAGAAGATAATCATAATGAGAGAACCAAGCTATATTTTGAGAAGAAGCAGGTAATGTATTTTGGCTCTTTGAATTTATCGTAGCAAAGCTAGATAAATAATTCTATTTTTTTAATTCTCTCATGAACACATTTTTTCTGATAGTGTGTTTCTAAAATTGTAACACATTTCTTTGAAAGTGATCAATTTACAGGAGAACTAAATTGGCTTCTTCAAAAATGGACCAATCAAAAAGAGTGTTGTTAGCATTCCTTACTCTATGGACCATTCGGTCTTTTGTATCAAATTACGTACACCAATCCCTCTTATTTTTTAATAACTTATGACGAATTAAATTCGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCAATAGCAGAGCAACAAAAGGCTCGTGAAAAAATGATGTATTTGGCAGAAGAACATAAGGCACGTAGTTCATTTTCCTATTATCTACAGGTTTTAATTAAGTTACATGTATATACTTGAGTTTTGAGGACTCTTTTGGTTGGATGTTGCAGAAAGAAAAAGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTGGATGCAAAACAAGCATTGGAATTGGAGATTGAACAGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTAGAGATACTGATCTAGATGAGAAGAAAAAATTGGAAGCAATCAGAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGGGTGGAAGATCTTCAACAAACATTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAAGTGTATGTCTTCCGTAACCAATCTTTTACAAAGTCGGGATAGGTTTTTTATTTGTAAAAATTTCCTTGTTAAATCTAAGCATAAATGTAGGATAATTTATATTTTTTAATTGACATAAAATTGTTTTATAATAATTATAGAAGAGTGTCCTATTTTGCAAACATTCAAATCATGTTTTTGGAATCTTATTTAAGTTGCTTGTAAGACAGTGTCTTGTTCACATGTATTTACAACAGCCAATGCAAAACGTTCGGTGTTTTCATCCTAGTTTCTATATCTAAGGAATTAAATTTTCCAATGCAACATCCTTTCACCTGAATCACGTGGTTGCTTGTTTCAACTATATATTAGCTATCTAGTTGTTTGTCTCTAAAGATGATGATTTTAATACATAAAGTTTTACATTTTATGTGAAAATTGGTAGAATCGGGTCAAGTTTATGAGAAGAGCATATTTTCTTCATACATTTTTAGTTAATTTGTCATGATTTCATTGTTTGTTCATAGTGGATTGGCTGCCCAAAGAACAACACTCAAGCTATAATTTCTGTGAAAAGGATGGGTGAACTTGATATTAAGCCATTTCTGGAAGCAGCTAAGAGAAAATTTTCTAATGAAATGAATGAGAAAGCCGCAACTAAGACTAAGAGAAAACTTTCAGAGGCAGAGAAAATAAAAGCAATCGAGTGGTGCTCTAAGTGGGAAGACTGTGTTAAAGATCCAAGTTGGCATCCGTTCAAAGTTGTAACTGATAAAGAAGGAAACTCCAAGGTACAATAACTTCGCGAATTATGTTTTTTCGTTAAAGTTAATATTTTTTTCTCAACAGTTCTATTAAGACAATGTTGGATATATTTATCCCCTAAAGCATATAATGCAGCATTTCTTATCAATTAGAAAGAATAGTAATTGGTACTGTGTAGGGATCTATTTACTGAAGCTTGCTGTTGTTAGCACTTATTTGGTTTTATTTGTTTCCCTTCTATGAACTGCATAAAATATGATCTAATATATGTTAGATATATTTCACAGGAAATTTTAGACGGAGAAGATGAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAACTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTCGGTACCCAATACCGGAACTCTGGAATTTTAAAGAAGGAAGGAAGGCTTCGTTGAAGGAGGGTGTTTCCCATTTAATTAAGCAATGGAAATCAAATAAGGGAAAGAAAACTTATTGA
Protein sequence

>MS.gene86637.t1

MYQNLEYTRESDLEYYKRIYYKDLKDDYYKDKLKISDSTYRCPFCYNKDYYSLNELLRHTSTIMGDLHETVKDIAKHSALEMYIESYGDVKVGKDKSPAVLNDKSLAVSTASDKSINFSITNEKSLVKNVAKGSLVNVNLGDDDDELFVYPWMVILKNIVTGFNPKSRKYVAKDPTKIKEELIMKGFHPMKVTALWNLHGQLPFAIVEFGGQWDGFHNAMKLERSFLAEHCGKRDYLGLRKQDRGDRLFGWMARRDDYDIKDIVGKHLQEKGDLKTVSGKEAEDNRKANKLVSGLENTLKLKTNELEQTTSKHHEAKVSLRKVMEQKEKMLEHFNKEISKMRQAEREYQEKVSKDHENASLELEVRRNKLISREKDLQKHQEDNHNERTKLYFEKKQNEMAIAEQQKAREKMMYLAEEHKARSSFSYYLQKEKEKLHKKIHDLERGLDAKQALELEIEQLKGAFQVMNHIRDTDLDEKKKLEAIRMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLISWIGCPKNNTQAIISVKRMGELDIKPFLEAAKRKFSNEMNEKAATKTKRKLSEAEKIKAIEWCSKWEDCVKDPSWHPFKVVTDKEGNSKEILDGEDEKLKSLKDEFGDEVHDAVATTLKELNEYNPSGRYPIPELWNFKEGRKASLKEGVSHLIKQWKSNKGKKTY