Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86795.t1 | RHN50806.1 | 97.7 | 176 | 4 | 0 | 15 | 190 | 279 | 454 | 1.30E-85 | 325.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86795.t1 | Q9LJE5 | 41.1 | 209 | 100 | 5 | 2 | 190 | 276 | 481 | 1.5e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86795.t1 | A0A396HC56 | 97.7 | 176 | 4 | 0 | 15 | 190 | 279 | 454 | 9.2e-86 | 325.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053166 | MS.gene86795 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene86795 | 0.822484 | 2.31E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene86795 | 0.820562 | 6.42E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86795.t1 | MTR_6g032970 | 90.341 | 176 | 4 | 1 | 15 | 190 | 279 | 441 | 5.81e-107 | 320 |
| MS.gene86795.t1 | MTR_7g085500 | 64.362 | 188 | 61 | 4 | 7 | 190 | 286 | 471 | 1.33e-72 | 231 |
| MS.gene86795.t1 | MTR_8g088390 | 52.809 | 178 | 71 | 7 | 22 | 190 | 222 | 395 | 2.13e-44 | 155 |
| MS.gene86795.t1 | MTR_8g088390 | 52.809 | 178 | 71 | 7 | 22 | 190 | 287 | 460 | 2.67e-44 | 155 |
| MS.gene86795.t1 | MTR_4g005110 | 35.714 | 182 | 87 | 6 | 14 | 190 | 278 | 434 | 1.07e-18 | 83.6 |
| MS.gene86795.t1 | MTR_2g032660 | 41.463 | 123 | 61 | 3 | 67 | 189 | 293 | 404 | 1.14e-17 | 80.5 |
| MS.gene86795.t1 | MTR_4g123630 | 40.136 | 147 | 63 | 4 | 49 | 190 | 245 | 371 | 1.56e-17 | 80.1 |
| MS.gene86795.t1 | MTR_2g063460 | 43.750 | 112 | 37 | 3 | 85 | 190 | 320 | 411 | 3.03e-17 | 79.3 |
| MS.gene86795.t1 | MTR_2g063460 | 43.750 | 112 | 37 | 3 | 85 | 190 | 322 | 413 | 3.15e-17 | 79.3 |
| MS.gene86795.t1 | MTR_2g005840 | 61.818 | 55 | 21 | 0 | 136 | 190 | 236 | 290 | 1.36e-16 | 77.0 |
| MS.gene86795.t1 | MTR_2g005840 | 61.818 | 55 | 21 | 0 | 136 | 190 | 267 | 321 | 1.45e-16 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86795.t1 | AT3G13460 | 46.919 | 211 | 85 | 9 | 2 | 190 | 276 | 481 | 2.57e-38 | 139 |
| MS.gene86795.t1 | AT3G13460 | 46.919 | 211 | 85 | 9 | 2 | 190 | 276 | 481 | 2.70e-38 | 137 |
| MS.gene86795.t1 | AT3G13460 | 46.919 | 211 | 85 | 9 | 2 | 190 | 273 | 478 | 2.72e-38 | 139 |
| MS.gene86795.t1 | AT3G13460 | 46.919 | 211 | 85 | 9 | 2 | 190 | 275 | 480 | 3.06e-38 | 139 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 243 | 397 | 1.41e-31 | 119 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 299 | 453 | 1.41e-31 | 120 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 299 | 453 | 1.47e-31 | 120 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 286 | 440 | 1.56e-31 | 120 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 256 | 410 | 1.59e-31 | 119 |
| MS.gene86795.t1 | AT1G55500 | 45.062 | 162 | 74 | 4 | 37 | 190 | 299 | 453 | 1.91e-31 | 119 |
| MS.gene86795.t1 | AT3G03950 | 40.936 | 171 | 77 | 6 | 28 | 190 | 127 | 281 | 4.60e-25 | 100 |
| MS.gene86795.t1 | AT3G03950 | 40.936 | 171 | 77 | 6 | 28 | 190 | 126 | 280 | 5.36e-25 | 100 |
| MS.gene86795.t1 | AT3G03950 | 40.936 | 171 | 77 | 6 | 28 | 190 | 130 | 284 | 5.59e-25 | 100 |
| MS.gene86795.t1 | AT5G61020 | 40.223 | 179 | 94 | 6 | 17 | 190 | 128 | 298 | 2.32e-24 | 99.4 |
| MS.gene86795.t1 | AT5G61020 | 40.223 | 179 | 94 | 6 | 17 | 190 | 130 | 300 | 2.53e-24 | 99.4 |
| MS.gene86795.t1 | AT3G13060 | 35.922 | 206 | 102 | 7 | 11 | 190 | 236 | 437 | 7.61e-20 | 86.7 |
| MS.gene86795.t1 | AT3G13060 | 36.585 | 205 | 102 | 7 | 11 | 190 | 236 | 437 | 7.74e-20 | 86.7 |
| MS.gene86795.t1 | AT3G13060 | 35.922 | 206 | 102 | 7 | 11 | 190 | 226 | 427 | 7.80e-20 | 86.7 |
| MS.gene86795.t1 | AT3G13060 | 35.922 | 206 | 102 | 7 | 11 | 190 | 214 | 415 | 8.62e-20 | 86.7 |
| MS.gene86795.t1 | AT3G13060 | 35.922 | 206 | 102 | 7 | 11 | 190 | 214 | 415 | 8.62e-20 | 86.7 |
| MS.gene86795.t1 | AT3G13060 | 35.922 | 206 | 102 | 7 | 11 | 190 | 236 | 437 | 8.82e-20 | 86.3 |
| MS.gene86795.t1 | AT3G17330 | 59.701 | 67 | 25 | 1 | 124 | 190 | 143 | 207 | 1.07e-18 | 83.2 |
| MS.gene86795.t1 | AT1G48110 | 71.698 | 53 | 15 | 0 | 138 | 190 | 308 | 360 | 1.41e-18 | 83.2 |
| MS.gene86795.t1 | AT1G48110 | 71.698 | 53 | 15 | 0 | 138 | 190 | 308 | 360 | 1.41e-18 | 83.2 |
| MS.gene86795.t1 | AT1G09810 | 35.359 | 181 | 87 | 7 | 23 | 190 | 107 | 270 | 1.47e-18 | 82.8 |
| MS.gene86795.t1 | AT1G09810 | 35.359 | 181 | 87 | 7 | 23 | 190 | 88 | 251 | 1.69e-18 | 82.8 |
| MS.gene86795.t1 | AT3G17330 | 59.701 | 67 | 25 | 1 | 124 | 190 | 245 | 309 | 1.74e-18 | 82.8 |
| MS.gene86795.t1 | AT3G17330 | 59.701 | 67 | 25 | 1 | 124 | 190 | 245 | 309 | 1.74e-18 | 82.8 |
| MS.gene86795.t1 | AT1G09810 | 67.273 | 55 | 18 | 0 | 136 | 190 | 174 | 228 | 2.11e-18 | 82.4 |
| MS.gene86795.t1 | AT1G27960 | 40.351 | 114 | 43 | 2 | 77 | 190 | 281 | 369 | 6.00e-18 | 80.9 |
| MS.gene86795.t1 | AT1G27960 | 40.351 | 114 | 43 | 2 | 77 | 190 | 207 | 295 | 8.58e-18 | 80.9 |
| MS.gene86795.t1 | AT1G79270 | 67.241 | 58 | 19 | 0 | 133 | 190 | 288 | 345 | 8.67e-18 | 80.9 |
| MS.gene86795.t1 | AT1G79270 | 67.241 | 58 | 19 | 0 | 133 | 190 | 288 | 345 | 8.67e-18 | 80.9 |
| MS.gene86795.t1 | AT1G79270 | 67.241 | 58 | 19 | 0 | 133 | 190 | 288 | 345 | 8.67e-18 | 80.9 |
| MS.gene86795.t1 | AT1G79270 | 67.241 | 58 | 19 | 0 | 133 | 190 | 303 | 360 | 8.88e-18 | 80.9 |
| MS.gene86795.t1 | AT1G27960 | 40.351 | 114 | 43 | 2 | 77 | 190 | 281 | 369 | 1.10e-17 | 80.5 |
| MS.gene86795.t1 | AT5G58190 | 42.000 | 100 | 48 | 3 | 91 | 190 | 275 | 364 | 3.44e-16 | 76.3 |
| MS.gene86795.t1 | AT5G58190 | 42.000 | 100 | 48 | 3 | 91 | 190 | 274 | 363 | 3.47e-16 | 76.3 |
Find 54 sgRNAs with CRISPR-Local
Find 56 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCTCAACTATTGTTTCT+AGG | 0.202952 | 3.4:+24081863 | MS.gene86795:CDS |
| CTCTGTATGTGTTTCCATAT+TGG | 0.246769 | 3.4:-24081972 | None:intergenic |
| TCTGGACTGGGACCGTATTC+TGG | 0.259091 | 3.4:+24081910 | MS.gene86795:CDS |
| TCTAACTATGGATCTACTTA+TGG | 0.286333 | 3.4:+24082000 | MS.gene86795:CDS |
| TCTAGCTTCTTGTTGCCATT+AGG | 0.298283 | 3.4:-24082378 | None:intergenic |
| CTAGCTTCTTGTTGCCATTA+GGG | 0.298390 | 3.4:-24082377 | None:intergenic |
| GAAGCTAGATGCGGCATATC+AGG | 0.346860 | 3.4:+24082392 | MS.gene86795:CDS |
| CCGTATTCTGGATATCCTAA+TGG | 0.351387 | 3.4:+24081922 | MS.gene86795:CDS |
| GTTATCATAGGAACCTGTTC+TGG | 0.374797 | 3.4:-24082025 | None:intergenic |
| TTATCATCATCACTCTTGAT+AGG | 0.378740 | 3.4:-24082210 | None:intergenic |
| AACACGATGTACAGCCAATA+TGG | 0.389273 | 3.4:+24081958 | MS.gene86795:CDS |
| CCGGTGTATTGTTGCCTGTC+AGG | 0.398793 | 3.4:-24082249 | None:intergenic |
| TTGCTTGGGTACATCCCATT+AGG | 0.407428 | 3.4:-24081937 | None:intergenic |
| AACTTGCATGGCTATTCATC+TGG | 0.421844 | 3.4:+24081892 | MS.gene86795:CDS |
| TACAGAGGCAGGTCTAACTA+TGG | 0.441046 | 3.4:+24081988 | MS.gene86795:CDS |
| CGTATTCTGGATATCCTAAT+GGG | 0.442464 | 3.4:+24081923 | MS.gene86795:CDS |
| CATGGCTATTCATCTGGACT+GGG | 0.442552 | 3.4:+24081898 | MS.gene86795:CDS |
| TATTGTTGCCTGTCAGGAAC+TGG | 0.454396 | 3.4:-24082243 | None:intergenic |
| TGGCTGTACATCGTGTTGCT+TGG | 0.469761 | 3.4:-24081952 | None:intergenic |
| AAAAGAAATGTGGATGGCTT+TGG | 0.470712 | 3.4:+24082090 | MS.gene86795:CDS |
| GGCTGTACATCGTGTTGCTT+GGG | 0.474945 | 3.4:-24081951 | None:intergenic |
| GCATGGCTATTCATCTGGAC+TGG | 0.477233 | 3.4:+24081897 | MS.gene86795:CDS |
| GGATCTATACTTGTTATCAT+AGG | 0.478586 | 3.4:-24082037 | None:intergenic |
| TCTACTTATGGATCCAGAAC+AGG | 0.481498 | 3.4:+24082012 | MS.gene86795:CDS |
| CACATTATTACTCAAGGGTC+AGG | 0.490934 | 3.4:+24082182 | MS.gene86795:CDS |
| GTGTGGACAAGTACCCCTAA+TGG | 0.497541 | 3.4:+24082363 | MS.gene86795:CDS |
| CCATTAGGATATCCAGAATA+CGG | 0.504485 | 3.4:-24081922 | None:intergenic |
| ACCTGTCACATTATTACTCA+AGG | 0.514931 | 3.4:+24082176 | MS.gene86795:CDS |
| AAGTATAGATCCACACGCTA+TGG | 0.515371 | 3.4:+24082048 | MS.gene86795:CDS |
| CCCTTGAGTAATAATGTGAC+AGG | 0.522853 | 3.4:-24082177 | None:intergenic |
| TAGCTTCTTGTTGCCATTAG+GGG | 0.524738 | 3.4:-24082376 | None:intergenic |
| AAGTGCTTCCAGTTCCTGAC+AGG | 0.533740 | 3.4:+24082235 | MS.gene86795:CDS |
| CATCATCACTCTTGATAGGA+AGG | 0.537515 | 3.4:-24082206 | None:intergenic |
| TCTAGGTTGCAGAACTTGCA+TGG | 0.539046 | 3.4:+24081880 | MS.gene86795:CDS |
| ATGGAAACACATACAGAGGC+AGG | 0.547380 | 3.4:+24081977 | MS.gene86795:CDS |
| CTGACAGGCAACAATACACC+GGG | 0.567636 | 3.4:+24082250 | MS.gene86795:CDS |
| ATTCTCAGATAAATCTTCCC+CGG | 0.595705 | 3.4:-24082268 | None:intergenic |
| TGGCTTTGGTGAGCTGAACA+AGG | 0.609686 | 3.4:+24082104 | MS.gene86795:CDS |
| TGTCATCAAATCTTATAGCG+AGG | 0.611587 | 3.4:+24082311 | MS.gene86795:CDS |
| AGAGTATGAAATATAATGTG+TGG | 0.612407 | 3.4:+24082346 | MS.gene86795:CDS |
| TGACCATGTCAAAAGAAATG+TGG | 0.616421 | 3.4:+24082080 | MS.gene86795:CDS |
| TCAGAACTATTGGAACCTCT+CGG | 0.617068 | 3.4:-24082129 | None:intergenic |
| AGATCCACACGCTATGGACG+TGG | 0.617909 | 3.4:+24082054 | MS.gene86795:CDS |
| TGCGGCATATCAGGAAGCCT+AGG | 0.627415 | 3.4:+24082401 | MS.gene86795:CDS |
| CAACCTAGAAACAATAGTTG+AGG | 0.643536 | 3.4:-24081866 | None:intergenic |
| AAAACCACGTCCATAGCGTG+TGG | 0.643915 | 3.4:-24082058 | None:intergenic |
| CCTGACAGGCAACAATACAC+CGG | 0.643940 | 3.4:+24082249 | MS.gene86795:CDS |
| CCTGTCACATTATTACTCAA+GGG | 0.647177 | 3.4:+24082177 | MS.gene86795:CDS |
| GGCTTTGGTGAGCTGAACAA+GGG | 0.653383 | 3.4:+24082105 | MS.gene86795:CDS |
| CATGTCAAAAGAAATGTGGA+TGG | 0.682176 | 3.4:+24082084 | MS.gene86795:CDS |
| CAATATGGAAACACATACAG+AGG | 0.684546 | 3.4:+24081973 | MS.gene86795:CDS |
| GAGCTGAACAAGGGACCGAG+AGG | 0.693881 | 3.4:+24082114 | MS.gene86795:CDS |
| TGGCAACAAGAAGCTAGATG+CGG | 0.702216 | 3.4:+24082383 | MS.gene86795:CDS |
| TGACAGGCAACAATACACCG+GGG | 0.819631 | 3.4:+24082251 | MS.gene86795:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATCATCAGAACTAT+TGG | - | chr3.4:24082142-24082161 | None:intergenic | 20.0% |
| ! | AGAGTATGAAATATAATGTG+TGG | + | chr3.4:24082346-24082365 | MS.gene86795:CDS | 25.0% |
| ! | GATAAAAATGACAAAAGTCT+TGG | + | chr3.4:24082153-24082172 | MS.gene86795:CDS | 25.0% |
| TCTAACTATGGATCTACTTA+TGG | + | chr3.4:24082000-24082019 | MS.gene86795:CDS | 30.0% | |
| TTATCATCATCACTCTTGAT+AGG | - | chr3.4:24082213-24082232 | None:intergenic | 30.0% | |
| !! | GGATCTATACTTGTTATCAT+AGG | - | chr3.4:24082040-24082059 | None:intergenic | 30.0% |
| AAAAGAAATGTGGATGGCTT+TGG | + | chr3.4:24082090-24082109 | MS.gene86795:CDS | 35.0% | |
| ACCTGTCACATTATTACTCA+AGG | + | chr3.4:24082176-24082195 | MS.gene86795:CDS | 35.0% | |
| ATTCTCAGATAAATCTTCCC+CGG | - | chr3.4:24082271-24082290 | None:intergenic | 35.0% | |
| CAACCTAGAAACAATAGTTG+AGG | - | chr3.4:24081869-24081888 | None:intergenic | 35.0% | |
| CAATATGGAAACACATACAG+AGG | + | chr3.4:24081973-24081992 | MS.gene86795:CDS | 35.0% | |
| CATGTCAAAAGAAATGTGGA+TGG | + | chr3.4:24082084-24082103 | MS.gene86795:CDS | 35.0% | |
| CCATTAGGATATCCAGAATA+CGG | - | chr3.4:24081925-24081944 | None:intergenic | 35.0% | |
| CCTGTCACATTATTACTCAA+GGG | + | chr3.4:24082177-24082196 | MS.gene86795:CDS | 35.0% | |
| CGTATTCTGGATATCCTAAT+GGG | + | chr3.4:24081923-24081942 | MS.gene86795:CDS | 35.0% | |
| CTCTGTATGTGTTTCCATAT+TGG | - | chr3.4:24081975-24081994 | None:intergenic | 35.0% | |
| TGACCATGTCAAAAGAAATG+TGG | + | chr3.4:24082080-24082099 | MS.gene86795:CDS | 35.0% | |
| TGTCATCAAATCTTATAGCG+AGG | + | chr3.4:24082311-24082330 | MS.gene86795:CDS | 35.0% | |
| ! | CATCCACATTTCTTTTGACA+TGG | - | chr3.4:24082086-24082105 | None:intergenic | 35.0% |
| ! | TCACCTCAACTATTGTTTCT+AGG | + | chr3.4:24081863-24081882 | MS.gene86795:CDS | 35.0% |
| AACACGATGTACAGCCAATA+TGG | + | chr3.4:24081958-24081977 | MS.gene86795:CDS | 40.0% | |
| AACTTGCATGGCTATTCATC+TGG | + | chr3.4:24081892-24081911 | MS.gene86795:CDS | 40.0% | |
| AAGTATAGATCCACACGCTA+TGG | + | chr3.4:24082048-24082067 | MS.gene86795:CDS | 40.0% | |
| CACATTATTACTCAAGGGTC+AGG | + | chr3.4:24082182-24082201 | MS.gene86795:CDS | 40.0% | |
| CATCATCACTCTTGATAGGA+AGG | - | chr3.4:24082209-24082228 | None:intergenic | 40.0% | |
| CCCTTGAGTAATAATGTGAC+AGG | - | chr3.4:24082180-24082199 | None:intergenic | 40.0% | |
| CCGTATTCTGGATATCCTAA+TGG | + | chr3.4:24081922-24081941 | MS.gene86795:CDS | 40.0% | |
| CTAGCTTCTTGTTGCCATTA+GGG | - | chr3.4:24082380-24082399 | None:intergenic | 40.0% | |
| GTTATCATAGGAACCTGTTC+TGG | - | chr3.4:24082028-24082047 | None:intergenic | 40.0% | |
| TAGCTTCTTGTTGCCATTAG+GGG | - | chr3.4:24082379-24082398 | None:intergenic | 40.0% | |
| TCAGAACTATTGGAACCTCT+CGG | - | chr3.4:24082132-24082151 | None:intergenic | 40.0% | |
| TCTACTTATGGATCCAGAAC+AGG | + | chr3.4:24082012-24082031 | MS.gene86795:CDS | 40.0% | |
| ! | TCTAGCTTCTTGTTGCCATT+AGG | - | chr3.4:24082381-24082400 | None:intergenic | 40.0% |
| ATGGAAACACATACAGAGGC+AGG | + | chr3.4:24081977-24081996 | MS.gene86795:CDS | 45.0% | |
| CATGGCTATTCATCTGGACT+GGG | + | chr3.4:24081898-24081917 | MS.gene86795:CDS | 45.0% | |
| TACAGAGGCAGGTCTAACTA+TGG | + | chr3.4:24081988-24082007 | MS.gene86795:CDS | 45.0% | |
| TATTGTTGCCTGTCAGGAAC+TGG | - | chr3.4:24082246-24082265 | None:intergenic | 45.0% | |
| TCTAGGTTGCAGAACTTGCA+TGG | + | chr3.4:24081880-24081899 | MS.gene86795:CDS | 45.0% | |
| TGGCAACAAGAAGCTAGATG+CGG | + | chr3.4:24082383-24082402 | MS.gene86795:CDS | 45.0% | |
| TTGCTTGGGTACATCCCATT+AGG | - | chr3.4:24081940-24081959 | None:intergenic | 45.0% | |
| AAAACCACGTCCATAGCGTG+TGG | - | chr3.4:24082061-24082080 | None:intergenic | 50.0% | |
| AAGTGCTTCCAGTTCCTGAC+AGG | + | chr3.4:24082235-24082254 | MS.gene86795:CDS | 50.0% | |
| CCTGACAGGCAACAATACAC+CGG | + | chr3.4:24082249-24082268 | MS.gene86795:CDS | 50.0% | |
| CTGACAGGCAACAATACACC+GGG | + | chr3.4:24082250-24082269 | MS.gene86795:CDS | 50.0% | |
| GAAGCTAGATGCGGCATATC+AGG | + | chr3.4:24082392-24082411 | MS.gene86795:CDS | 50.0% | |
| GCATGGCTATTCATCTGGAC+TGG | + | chr3.4:24081897-24081916 | MS.gene86795:CDS | 50.0% | |
| GTGTGGACAAGTACCCCTAA+TGG | + | chr3.4:24082363-24082382 | MS.gene86795:CDS | 50.0% | |
| TGACAGGCAACAATACACCG+GGG | + | chr3.4:24082251-24082270 | MS.gene86795:CDS | 50.0% | |
| ! | GGCTTTGGTGAGCTGAACAA+GGG | + | chr3.4:24082105-24082124 | MS.gene86795:CDS | 50.0% |
| ! | TGGCTGTACATCGTGTTGCT+TGG | - | chr3.4:24081955-24081974 | None:intergenic | 50.0% |
| !! | GGCTGTACATCGTGTTGCTT+GGG | - | chr3.4:24081954-24081973 | None:intergenic | 50.0% |
| !! | TGGCTTTGGTGAGCTGAACA+AGG | + | chr3.4:24082104-24082123 | MS.gene86795:CDS | 50.0% |
| AGATCCACACGCTATGGACG+TGG | + | chr3.4:24082054-24082073 | MS.gene86795:CDS | 55.0% | |
| CCGGTGTATTGTTGCCTGTC+AGG | - | chr3.4:24082252-24082271 | None:intergenic | 55.0% | |
| ! | TCTGGACTGGGACCGTATTC+TGG | + | chr3.4:24081910-24081929 | MS.gene86795:CDS | 55.0% |
| GAGCTGAACAAGGGACCGAG+AGG | + | chr3.4:24082114-24082133 | MS.gene86795:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 24081850 | 24082422 | 24081850 | ID=MS.gene86795 |
| chr3.4 | mRNA | 24081850 | 24082422 | 24081850 | ID=MS.gene86795.t1;Parent=MS.gene86795 |
| chr3.4 | exon | 24081850 | 24082422 | 24081850 | ID=MS.gene86795.t1.exon1;Parent=MS.gene86795.t1 |
| chr3.4 | CDS | 24081850 | 24082422 | 24081850 | ID=cds.MS.gene86795.t1;Parent=MS.gene86795.t1 |
| Gene Sequence |
| Protein sequence |
