AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87293

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87293.t1 MTR_2g083200 98.311 296 4 1 1 295 1 296 0.0 587
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87293.t1 AT4G27120 64.262 305 92 5 1 295 1 298 4.59e-97 288
MS.gene87293.t1 AT4G27120 64.262 305 92 5 1 295 1 298 4.59e-97 288
MS.gene87293.t1 AT4G27120 75.000 228 47 4 76 295 4 229 6.65e-86 257

Find 67 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTATATATTCAACAAAAT+TGG 0.202421 2.2:+14111107 None:intergenic
GGTTTGATTTACTAGCTAAA+TGG 0.210956 2.2:+14108468 None:intergenic
TTCTGCAGCAAGATCTTCTA+AGG 0.265042 2.2:+14110883 None:intergenic
AATAAACCTTGTTGCGTTGC+AGG 0.302830 2.2:+14113759 None:intergenic
TCCTCAGCATAATGAGTCTT+TGG 0.336486 2.2:+14108428 None:intergenic
GGCCAAAGCATCAAAGAAAA+AGG 0.344496 2.2:-14112904 MS.gene87293:CDS
CTTTGACTGCCGAGCTTCTT+CGG 0.373097 2.2:+14111415 None:intergenic
TTTCGGGTGTCATGGATGAT+AGG 0.388749 2.2:-14108571 MS.gene87293:CDS
GGATGAAGAGCGTGAGGCAC+AGG 0.396546 2.2:-14111360 MS.gene87293:CDS
GTTTGATTTACTAGCTAAAT+GGG 0.400098 2.2:+14108469 None:intergenic
TATCAATCGCATCACATCTC+TGG 0.405277 2.2:-14109044 MS.gene87293:CDS
CGTGCAGCAGGTTCTCTAAC+CGG 0.424599 2.2:+14113849 None:intergenic
TTGGCTCTAAATCAATGAAC+TGG 0.430161 2.2:+14108447 None:intergenic
AGAGGAAGCCAAAGCTCAAA+AGG 0.449793 2.2:-14111241 MS.gene87293:CDS
CGTCGGAGAACGGTTGCGTC+TGG 0.451265 2.2:-14113804 MS.gene87293:CDS
CACTAATTCCACTCTACCTA+TGG 0.452049 2.2:-14114020 MS.gene87293:CDS
GTAGCGGTGGCACGTGCAGC+AGG 0.458752 2.2:+14113837 None:intergenic
TTCCTCCGAAGAATCTCATC+AGG 0.463827 2.2:-14113962 MS.gene87293:intron
AGGAACTCAAAAGGCAAGAG+AGG 0.466995 2.2:-14112884 MS.gene87293:CDS
GCAAACCTGATGAGATTCTT+CGG 0.472566 2.2:+14113957 None:intergenic
TTCAGAAATGCGGAGGTTGA+AGG 0.477745 2.2:-14111381 MS.gene87293:CDS
CCGCTACTCGCCGCATGCGT+CGG 0.483491 2.2:-14113821 MS.gene87293:CDS
TCGCCGCATGCGTCGGAGAA+CGG 0.485918 2.2:-14113814 MS.gene87293:CDS
AGGTCGGCTTTCGGGTGTCA+TGG 0.491989 2.2:-14108579 MS.gene87293:CDS
AGCTCAAAAGGCTAGGGAAG+AGG 0.494792 2.2:-14111229 MS.gene87293:CDS
ACCTCCGCATTTCTGAATAA+CGG 0.508197 2.2:+14111387 None:intergenic
TTCGGGTGTCATGGATGATA+GGG 0.512596 2.2:-14108570 MS.gene87293:CDS
CATCACATCTCTGGAAAGCA+TGG 0.517076 2.2:-14109035 MS.gene87293:CDS
AATCGCGATGGCGTTTCCAT+AGG 0.517904 2.2:+14114004 None:intergenic
AAGCCAAAGCTCAAAAGGCT+AGG 0.524157 2.2:-14111236 MS.gene87293:CDS
AAAATTCATTTACATCTCAC+AGG 0.525131 2.2:-14108546 MS.gene87293:CDS
AGGTACACTTGAAGAGGAGC+AGG 0.538791 2.2:-14111151 MS.gene87293:CDS
TGAGGCACAGGAGCGTAAGT+TGG 0.547791 2.2:-14111348 MS.gene87293:intron
TTTGAAAGGCCGAAGAAGCT+CGG 0.559088 2.2:-14111424 MS.gene87293:intron
AGCCAAAGCTCAAAAGGCTA+GGG 0.560451 2.2:-14111235 MS.gene87293:CDS
CCGACGCATGCGGCGAGTAG+CGG 0.568591 2.2:+14113821 None:intergenic
GCTCCGCCTGCAACGCAACA+AGG 0.578148 2.2:-14113765 MS.gene87293:intron
TTCGGAGGAAGATGAAGATG+AGG 0.579662 2.2:+14113975 None:intergenic
TTATATTAAGCGACAAGGGA+GGG 0.582545 2.2:-14108501 MS.gene87293:CDS
ACGCATGCGGCGAGTAGCGG+TGG 0.584210 2.2:+14113824 None:intergenic
AGAGAGGGAAGCTCGACGGC+AGG 0.585418 2.2:-14112868 MS.gene87293:intron
GGCAAGAGAGGGAAGCTCGA+CGG 0.594227 2.2:-14112872 MS.gene87293:CDS
TGATGAAGGTACACTTGAAG+AGG 0.595506 2.2:-14111157 MS.gene87293:CDS
GGAACTCAAAAGGCAAGAGA+GGG 0.598128 2.2:-14112883 MS.gene87293:CDS
TGCTGAGGACATTAGTAACA+TGG 0.604243 2.2:-14108414 MS.gene87293:CDS
CAACCGTTCTCCGACGCATG+CGG 0.605145 2.2:+14113811 None:intergenic
TGGCGTTTCCATAGGTAGAG+TGG 0.606502 2.2:+14114012 None:intergenic
ACCGTTATTCAGAAATGCGG+AGG 0.609223 2.2:-14111388 MS.gene87293:CDS
AGAATTTAAATTGCGCACAC+AGG 0.611949 2.2:-14110864 MS.gene87293:intron
TTAGAGTTTGACAAGTGGAA+AGG 0.613934 2.2:-14111195 MS.gene87293:CDS
ATTATATTAAGCGACAAGGG+AGG 0.616619 2.2:-14108502 MS.gene87293:CDS
GAAAGTGACAATGAAGCTGC+TGG 0.617304 2.2:-14112939 MS.gene87293:CDS
ATCACATCTCTGGAAAGCAT+GGG 0.618886 2.2:-14109034 MS.gene87293:intron
TCTGCAGCAAGATCTTCTAA+GGG 0.619289 2.2:+14110884 None:intergenic
AAACCTTGTTGCGTTGCAGG+CGG 0.623759 2.2:+14113762 None:intergenic
CTGCGTTAGAGTTTGACAAG+TGG 0.625306 2.2:-14111200 MS.gene87293:CDS
CTGATTATATTAAGCGACAA+GGG 0.630907 2.2:-14108505 MS.gene87293:CDS
CTGCAATGAGAAGTGTAGAG+AGG 0.643472 2.2:+14114043 None:intergenic
TCGGGTGTCATGGATGATAG+GGG 0.647827 2.2:-14108569 MS.gene87293:CDS
GTTGAAGGATGAAGAGCGTG+AGG 0.648299 2.2:-14111366 MS.gene87293:CDS
ATGAGGATTGAGAATCGCGA+TGG 0.648606 2.2:+14113992 None:intergenic
GCTGATTATATTAAGCGACA+AGG 0.652115 2.2:-14108506 MS.gene87293:CDS
GCCAAAGACTCATTATGCTG+AGG 0.657399 2.2:-14108429 MS.gene87293:CDS
AGCTGCTGGTGATGAGCATG+AGG 0.671214 2.2:-14112925 MS.gene87293:CDS
AAGACCGTTATTCAGAAATG+CGG 0.686615 2.2:-14111391 MS.gene87293:CDS
AACCTGATGAGATTCTTCGG+AGG 0.714808 2.2:+14113960 None:intergenic
TGAGGACATTAGTAACATGG+AGG 0.752094 2.2:-14108411 MS.gene87293:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATATTCTATAAACTTA+AGG + chr2.2:14112880-14112899 None:intergenic 10.0%
!! TTATAGAATATTTATATACA+AGG - chr2.2:14112885-14112904 MS.gene87293:CDS 10.0%
!! TTTAATTATATGTATGTATT+AGG + chr2.2:14112801-14112820 None:intergenic 10.0%
!!! AAATAATATTTTAGATAAAG+GGG - chr2.2:14110113-14110132 MS.gene87293:intron 10.0%
!!! AGTAATATATTTTTCATTTT+CGG - chr2.2:14113355-14113374 MS.gene87293:intron 10.0%
!!! GAAATAATATTTTAGATAAA+GGG - chr2.2:14110112-14110131 MS.gene87293:intron 10.0%
!! AAGAAATATTTGACATAATT+GGG - chr2.2:14113639-14113658 MS.gene87293:intron 15.0%
!! AATAGAATATAAAAAAGAAG+AGG + chr2.2:14111676-14111695 None:intergenic 15.0%
!! ATATAAATCATTAAACATAC+TGG + chr2.2:14111785-14111804 None:intergenic 15.0%
!! CTTTATATATTCAACAAAAT+TGG + chr2.2:14111356-14111375 None:intergenic 15.0%
!! TAATTGAATTAATTCTTGTT+TGG - chr2.2:14108808-14108827 MS.gene87293:intron 15.0%
!!! AATAATATTTTAGATAAAGG+GGG - chr2.2:14110114-14110133 MS.gene87293:intron 15.0%
!!! AATGATTTATTTATTTTGTC+AGG - chr2.2:14113861-14113880 MS.gene87293:intron 15.0%
!!! AGACTTTTTTGAAAAATAAA+AGG - chr2.2:14110090-14110109 MS.gene87293:intron 15.0%
!!! CAATTTTGTTGAATATATAA+AGG - chr2.2:14111354-14111373 MS.gene87293:CDS 15.0%
!!! GATTTAATTTTATTTGTGTT+TGG - chr2.2:14108744-14108763 MS.gene87293:intron 15.0%
!!! GGAAATAATATTTTAGATAA+AGG - chr2.2:14110111-14110130 MS.gene87293:intron 15.0%
!!! GTAATATATTTTTCATTTTC+GGG - chr2.2:14113356-14113375 MS.gene87293:intron 15.0%
!!! TAATATATTTTTCATTTTCG+GGG - chr2.2:14113357-14113376 MS.gene87293:intron 15.0%
!!! TATATATTTCTTTTGATAGA+TGG + chr2.2:14113486-14113505 None:intergenic 15.0%
!!! TTTTATCTTACATTTTGTAA+TGG - chr2.2:14112225-14112244 MS.gene87293:intron 15.0%
!! AAAAGAAGTTAGATATTAGT+GGG + chr2.2:14112087-14112106 None:intergenic 20.0%
!! AAAAGTTTATTTATGTCCAT+AGG - chr2.2:14111438-14111457 MS.gene87293:intron 20.0%
!! AAAGTTTATTTATGTCCATA+GGG - chr2.2:14111439-14111458 MS.gene87293:intron 20.0%
!! AACTTAATGATAATTAGCTA+AGG - chr2.2:14111468-14111487 MS.gene87293:intron 20.0%
!! AACTTCCAATTAATAATGTT+TGG + chr2.2:14112111-14112130 None:intergenic 20.0%
!! ACTTAATGATAATTAGCTAA+GGG - chr2.2:14111469-14111488 MS.gene87293:intron 20.0%
!! ACTTCCAATTAATAATGTTT+GGG + chr2.2:14112110-14112129 None:intergenic 20.0%
!! AGAAACAATATCTTAAAGTT+TGG - chr2.2:14112913-14112932 MS.gene87293:CDS 20.0%
!! AGATAATACAAAGGATAATT+TGG - chr2.2:14110167-14110186 MS.gene87293:intron 20.0%
!! ATAAAATTCCATTAATCAGA+TGG + chr2.2:14109110-14109129 None:intergenic 20.0%
!! ATAATCAATTGTTTAATTCG+TGG - chr2.2:14112353-14112372 MS.gene87293:intron 20.0%
!! CAAACAATATAAAAAAGAAG+AGG + chr2.2:14111709-14111728 None:intergenic 20.0%
!! CATCACTCATTATTAAAAAT+GGG - chr2.2:14110548-14110567 MS.gene87293:intron 20.0%
!! GAAACAATATCTTAAAGTTT+GGG - chr2.2:14112914-14112933 MS.gene87293:CDS 20.0%
!! GAAGAAATATTTGACATAAT+TGG - chr2.2:14113638-14113657 MS.gene87293:intron 20.0%
!! TAATCAATTGTTTAATTCGT+GGG - chr2.2:14112354-14112373 MS.gene87293:intron 20.0%
!! TAGATGGTAATTTAAAAGAA+AGG + chr2.2:14113470-14113489 None:intergenic 20.0%
!! TATGATGAAAAATAAACCAA+GGG + chr2.2:14113515-14113534 None:intergenic 20.0%
!! TCATCACTCATTATTAAAAA+TGG - chr2.2:14110547-14110566 MS.gene87293:intron 20.0%
!! TGATTGTATATGAATTCAAA+AGG + chr2.2:14113566-14113585 None:intergenic 20.0%
!! TTAAATTTGACTAACCAAAA+TGG - chr2.2:14109758-14109777 MS.gene87293:intron 20.0%
!! TTAATTGTGAATAAATCATC+AGG - chr2.2:14108586-14108605 MS.gene87293:intron 20.0%
!! TTACTTAGAAACATTAGAAA+AGG + chr2.2:14113270-14113289 None:intergenic 20.0%
!!! AATAGTTTAATTTTGTTCTC+AGG - chr2.2:14110524-14110543 MS.gene87293:intron 20.0%
!!! ATAATATTTTAGATAAAGGG+GGG - chr2.2:14110115-14110134 MS.gene87293:intron 20.0%
!!! ATTTATTTATTTTGTCAGGT+CGG - chr2.2:14113865-14113884 MS.gene87293:intron 20.0%
!!! GTTGTTTTTATAAGTTATCA+TGG - chr2.2:14108940-14108959 MS.gene87293:intron 20.0%
!!! TCGACTACTTTATAATTTTA+TGG - chr2.2:14112998-14113017 MS.gene87293:intron 20.0%
!!! TTTCTAATGTTTCTAAGTAA+TGG - chr2.2:14113270-14113289 MS.gene87293:intron 20.0%
!!! TTTTCCCAAACATTATTAAT+TGG - chr2.2:14112103-14112122 MS.gene87293:intron 20.0%
! AAAACAAGTGAAAAGACAAT+GGG - chr2.2:14111879-14111898 MS.gene87293:intron 25.0%
! AAAATTCATTTACATCTCAC+AGG - chr2.2:14113914-14113933 MS.gene87293:intron 25.0%
! AAACATGACTAGTATTATAC+AGG - chr2.2:14112005-14112024 MS.gene87293:intron 25.0%
! AACATGACTAGTATTATACA+GGG - chr2.2:14112006-14112025 MS.gene87293:intron 25.0%
! AACTAACTAATCATTTAACC+AGG + chr2.2:14110914-14110933 None:intergenic 25.0%
! AAGAAACAATCTCTTAAGTT+TGG - chr2.2:14112851-14112870 MS.gene87293:intron 25.0%
! AAGATGTTATGTGTATATGA+AGG - chr2.2:14109798-14109817 MS.gene87293:intron 25.0%
! AAGGTTAATTGGTTAAAAGA+AGG + chr2.2:14110256-14110275 None:intergenic 25.0%
! ACTAACTAATCATTTAACCA+GGG + chr2.2:14110913-14110932 None:intergenic 25.0%
! ACTTGAACAAAATAGTGAAA+TGG + chr2.2:14109308-14109327 None:intergenic 25.0%
! AGAAACAATCTCTTAAGTTT+GGG - chr2.2:14112852-14112871 MS.gene87293:intron 25.0%
! ATAACAGAACAATAAACAAG+TGG - chr2.2:14110469-14110488 MS.gene87293:intron 25.0%
! ATAGTGAAATGGAAAAGAAA+AGG + chr2.2:14109297-14109316 None:intergenic 25.0%
! CACAAATAACAAGTAAGAAA+AGG + chr2.2:14110708-14110727 None:intergenic 25.0%
! CTACTTACATATTTAGTTGT+AGG - chr2.2:14111835-14111854 MS.gene87293:intron 25.0%
! CTATGATGAAAAATAAACCA+AGG + chr2.2:14113516-14113535 None:intergenic 25.0%
! GAAAAGAAGTTAGATATTAG+TGG + chr2.2:14112088-14112107 None:intergenic 25.0%
! GTGTATATGAAGGTTTAATA+AGG - chr2.2:14109808-14109827 MS.gene87293:intron 25.0%
! GTTAAAATGTGGTGAAATTA+GGG + chr2.2:14108545-14108564 None:intergenic 25.0%
! TAACAGAACAATAAACAAGT+GGG - chr2.2:14110470-14110489 MS.gene87293:intron 25.0%
! TATCATCTATGTTGAACATT+TGG + chr2.2:14112264-14112283 None:intergenic 25.0%
! TATTGCATAAAATAGAGTCA+TGG + chr2.2:14110606-14110625 None:intergenic 25.0%
! TGTTAAAATGTGGTGAAATT+AGG + chr2.2:14108546-14108565 None:intergenic 25.0%
!! AAACTTTTGACAACTTATCA+AGG + chr2.2:14111426-14111445 None:intergenic 25.0%
!! ACTATTTTGTTCAAGTGTTT+AGG - chr2.2:14109312-14109331 MS.gene87293:intron 25.0%
!! CTATTTTGTTCAAGTGTTTA+GGG - chr2.2:14109313-14109332 MS.gene87293:intron 25.0%
!! GTTTGATTTACTAGCTAAAT+GGG + chr2.2:14113994-14114013 None:intergenic 25.0%
!! TGTTTGTTAATATAAACCGA+AGG + chr2.2:14111990-14112009 None:intergenic 25.0%
!! TTTTGGTACTTCTTTTTGAA+AGG - chr2.2:14111022-14111041 MS.gene87293:intron 25.0%
!!! ACAGATTTTGATTTATGAGA+TGG + chr2.2:14110422-14110441 None:intergenic 25.0%
!!! ACTCTCGATTTTTAAAACAT+TGG + chr2.2:14112426-14112445 None:intergenic 25.0%
!!! ATCTTGTAGACAAGTTTTAT+CGG - chr2.2:14112294-14112313 MS.gene87293:intron 25.0%
!!! CAGATTTTGATTTATGAGAT+GGG + chr2.2:14110421-14110440 None:intergenic 25.0%
!!! CGAGTTTTATTGTTAAAATG+TGG + chr2.2:14108556-14108575 None:intergenic 25.0%
!!! CTCTCGATTTTTAAAACATT+GGG + chr2.2:14112425-14112444 None:intergenic 25.0%
!!! TAAAACCTAGCTATTTTTGT+AGG + chr2.2:14113753-14113772 None:intergenic 25.0%
!!! TAATATTTTAGATAAAGGGG+GGG - chr2.2:14110116-14110135 MS.gene87293:intron 25.0%
AAAAAAGAAGAGGTGATAGA+GGG + chr2.2:14111666-14111685 None:intergenic 30.0%
AAAAGACAATGGGAAAACAA+AGG - chr2.2:14111889-14111908 MS.gene87293:intron 30.0%
AAAATTGAACTGCTGTAGTT+TGG - chr2.2:14109254-14109273 MS.gene87293:intron 30.0%
AAAGACAATGGGAAAACAAA+GGG - chr2.2:14111890-14111909 MS.gene87293:intron 30.0%
AAATTCCATTAATCAGATGG+TGG + chr2.2:14109107-14109126 None:intergenic 30.0%
AAATTGAACTGCTGTAGTTT+GGG - chr2.2:14109255-14109274 MS.gene87293:intron 30.0%
AACCTGAACCATATTTCAAT+AGG - chr2.2:14112967-14112986 MS.gene87293:intron 30.0%
AAGAAAAGGCAACAAATTGA+TGG + chr2.2:14110694-14110713 None:intergenic 30.0%
ACATGCACAAAAATCTCTTA+AGG - chr2.2:14112824-14112843 MS.gene87293:intron 30.0%
AGTTTCCTACAAAAATAGCT+AGG - chr2.2:14113745-14113764 MS.gene87293:intron 30.0%
ATCATATCACAGATTCTGAT+AGG - chr2.2:14112488-14112507 MS.gene87293:intron 30.0%
ATCCTATTGAAATATGGTTC+AGG + chr2.2:14112972-14112991 None:intergenic 30.0%
ATGAATTCAAAAGGAGTAGA+TGG + chr2.2:14113557-14113576 None:intergenic 30.0%
ATTCCACTATTTACAGAGAT+TGG - chr2.2:14111934-14111953 MS.gene87293:intron 30.0%
ATTCCATAAGCTCTTTCAAA+CGG - chr2.2:14109031-14109050 MS.gene87293:intron 30.0%
CAAAGAAAAAGGAACTCAAA+AGG - chr2.2:14109567-14109586 MS.gene87293:intron 30.0%
CAACTTATCAAGGCAAAATA+AGG + chr2.2:14111416-14111435 None:intergenic 30.0%
CACTAAGATATTCATTTGTC+TGG - chr2.2:14109684-14109703 MS.gene87293:intron 30.0%
CAGACATGATATTCAGATAT+TGG - chr2.2:14109917-14109936 MS.gene87293:intron 30.0%
CTAACTAATCATTTAACCAG+GGG + chr2.2:14110912-14110931 None:intergenic 30.0%
CTGATTATATTAAGCGACAA+GGG - chr2.2:14113955-14113974 MS.gene87293:intron 30.0%
CTTTCTTATGGTCTATTGAT+CGG - chr2.2:14111174-14111193 MS.gene87293:CDS 30.0%
GAAAACAAGTGAAAAGACAA+TGG - chr2.2:14111878-14111897 MS.gene87293:intron 30.0%
GAAATATATACACTTTCCCT+TGG - chr2.2:14113496-14113515 MS.gene87293:intron 30.0%
GACATCATCCTATTGAAATA+TGG + chr2.2:14112978-14112997 None:intergenic 30.0%
GCATATTAGCAAATATACCT+AGG + chr2.2:14112766-14112785 None:intergenic 30.0%
TAAAAAAGAAGAGGTGATAG+AGG + chr2.2:14111667-14111686 None:intergenic 30.0%
TAAAAACATTCAATGTCCTC+AGG + chr2.2:14112169-14112188 None:intergenic 30.0%
TAAAAGAAAGGATACACGAA+AGG + chr2.2:14113458-14113477 None:intergenic 30.0%
TAAACAGCACTATATTGTTG+CGG - chr2.2:14110580-14110599 MS.gene87293:intron 30.0%
TAAACTATTGATGTCCTCAT+AGG + chr2.2:14110513-14110532 None:intergenic 30.0%
TAACCAATCTCTGTAAATAG+TGG + chr2.2:14111940-14111959 None:intergenic 30.0%
TCATATCACAGATTCTGATA+GGG - chr2.2:14112489-14112508 MS.gene87293:intron 30.0%
TCTCGGATTACTAAACAATA+GGG + chr2.2:14110629-14110648 None:intergenic 30.0%
TGGTTTATGATAGAACGTTA+TGG - chr2.2:14113164-14113183 MS.gene87293:intron 30.0%
TGTTAGCAGAGAAATTCTAT+AGG + chr2.2:14109994-14110013 None:intergenic 30.0%
TTAAACTAGTACTGCTTTGT+GGG - chr2.2:14109415-14109434 MS.gene87293:intron 30.0%
TTCATTCTAGTGAAGATCTT+TGG + chr2.2:14110398-14110417 None:intergenic 30.0%
! AACTACTTGCCATTGTTATT+TGG - chr2.2:14109362-14109381 MS.gene87293:intron 30.0%
! AGATTGGTCAATTCAGAAAA+AGG + chr2.2:14111640-14111659 None:intergenic 30.0%
! AGTTGATATTCATAGAGATG+AGG - chr2.2:14112541-14112560 MS.gene87293:intron 30.0%
! CTAAGTGGTTGATTAGATTT+TGG - chr2.2:14111005-14111024 MS.gene87293:intron 30.0%
! GGTTTGATTTACTAGCTAAA+TGG + chr2.2:14113995-14114014 None:intergenic 30.0%
! GTGTAGTTTTCTACTTGAAA+GGG - chr2.2:14109219-14109238 MS.gene87293:intron 30.0%
! GTTAAAAGAAGGTCATGTTT+TGG + chr2.2:14110245-14110264 None:intergenic 30.0%
! TAATTGTCCGATACAGTTTT+GGG + chr2.2:14109970-14109989 None:intergenic 30.0%
! TGAGGACATTGAATGTTTTT+AGG - chr2.2:14112168-14112187 MS.gene87293:intron 30.0%
! TGTGTAGTTTTCTACTTGAA+AGG - chr2.2:14109218-14109237 MS.gene87293:intron 30.0%
! TTAAAGTTTGGGATTACGTA+AGG - chr2.2:14112925-14112944 MS.gene87293:CDS 30.0%
! TTAATTGTCCGATACAGTTT+TGG + chr2.2:14109971-14109990 None:intergenic 30.0%
! TTCCTTTTTCTTTGATGCTT+TGG + chr2.2:14109561-14109580 None:intergenic 30.0%
!! ACATTTTGTAATGGAAGCTA+GGG - chr2.2:14112234-14112253 MS.gene87293:intron 30.0%
!! GGTTTTATAGGTGTATCAAA+TGG - chr2.2:14113795-14113814 MS.gene87293:CDS 30.0%
!! TACATTTTGTAATGGAAGCT+AGG - chr2.2:14112233-14112252 MS.gene87293:intron 30.0%
!! TCTTGTAGACAAGTTTTATC+GGG - chr2.2:14112295-14112314 MS.gene87293:intron 30.0%
!! TGATGGTGTTTTATGATTGA+TGG - chr2.2:14108774-14108793 MS.gene87293:intron 30.0%
!!! GAATTTTCAGTTGATGATGA+AGG - chr2.2:14111289-14111308 MS.gene87293:intron 30.0%
!!! GGAAGTTTTTTTCTCACTTT+GGG - chr2.2:14113816-14113835 MS.gene87293:CDS 30.0%
!!! TGAAATTAGGGTTTTGGATT+GGG + chr2.2:14108533-14108552 None:intergenic 30.0%
!!! TGGAAGTTTTTTTCTCACTT+TGG - chr2.2:14113815-14113834 MS.gene87293:CDS 30.0%
AACAACCAGTTAAAACCTGA+AGG - chr2.2:14110010-14110029 MS.gene87293:intron 35.0%
AACAGAGAGCCAAATAACAA+TGG + chr2.2:14109374-14109393 None:intergenic 35.0%
AAGACCGTTATTCAGAAATG+CGG - chr2.2:14111069-14111088 MS.gene87293:intron 35.0%
AATTGAACTGCTGTAGTTTG+GGG - chr2.2:14109256-14109275 MS.gene87293:intron 35.0%
ACATCATCCCAAAACTGTAT+CGG - chr2.2:14109960-14109979 MS.gene87293:intron 35.0%
ACATGGCATCTAATCTAACA+TGG + chr2.2:14113594-14113613 None:intergenic 35.0%
ACCCTATTGTTGCAAGTTAT+GGG - chr2.2:14113692-14113711 MS.gene87293:intron 35.0%
AGAATTTAAATTGCGCACAC+AGG - chr2.2:14111596-14111615 MS.gene87293:intron 35.0%
ATAATGAGGCTATCATAGGA+AGG - chr2.2:14113132-14113151 MS.gene87293:intron 35.0%
ATCATTATGCTCTTAGACAC+AGG + chr2.2:14109738-14109757 None:intergenic 35.0%
ATGACACTCTCAAGGTTAAT+TGG + chr2.2:14110267-14110286 None:intergenic 35.0%
ATGACACTGTAAACTTATGC+AGG - chr2.2:14113389-14113408 MS.gene87293:intron 35.0%
ATGCATAATGAGGCTATCAT+AGG - chr2.2:14113128-14113147 MS.gene87293:intron 35.0%
ATTATATTAAGCGACAAGGG+AGG - chr2.2:14113958-14113977 MS.gene87293:intron 35.0%
CACATGATAGGATTACTTTG+AGG - chr2.2:14109885-14109904 MS.gene87293:intron 35.0%
CTTATACTCCATAAGCCATT+GGG - chr2.2:14112032-14112051 MS.gene87293:intron 35.0%
CTTTGTGGGAATAATGTTCA+TGG - chr2.2:14109429-14109448 MS.gene87293:intron 35.0%
GAAGTTAGATATTAGTGGGA+TGG + chr2.2:14112083-14112102 None:intergenic 35.0%
GATTCAGTTAAACTAAGCCT+AGG - chr2.2:14112746-14112765 MS.gene87293:intron 35.0%
GCTGATTATATTAAGCGACA+AGG - chr2.2:14113954-14113973 MS.gene87293:intron 35.0%
GGTTATAATTGTAACCGTGT+GGG - chr2.2:14111490-14111509 MS.gene87293:intron 35.0%
GTCTCGGATTACTAAACAAT+AGG + chr2.2:14110630-14110649 None:intergenic 35.0%
GTTAAACTAGTACTGCTTTG+TGG - chr2.2:14109414-14109433 MS.gene87293:intron 35.0%
TACCCTATTGTTGCAAGTTA+TGG - chr2.2:14113691-14113710 MS.gene87293:intron 35.0%
TCAAAAGGAGTAGATGGTAA+TGG + chr2.2:14113551-14113570 None:intergenic 35.0%
TCTTATACTCCATAAGCCAT+TGG - chr2.2:14112031-14112050 MS.gene87293:intron 35.0%
TCTTGTGATTCTCAATTGCA+TGG - chr2.2:14112598-14112617 MS.gene87293:intron 35.0%
TGGAGATAGAGAAGAGAAAA+GGG + chr2.2:14110225-14110244 None:intergenic 35.0%
TGTTCTTGAAACTGACTGAT+CGG - chr2.2:14113242-14113261 MS.gene87293:intron 35.0%
TTAGAGTTTGACAAGTGGAA+AGG - chr2.2:14111265-14111284 MS.gene87293:intron 35.0%
TTATATTAAGCGACAAGGGA+GGG - chr2.2:14113959-14113978 MS.gene87293:intron 35.0%
TTGGAGATAGAGAAGAGAAA+AGG + chr2.2:14110226-14110245 None:intergenic 35.0%
TTGTGTTTGGTATTGCATGA+TGG - chr2.2:14108757-14108776 MS.gene87293:intron 35.0%
TTTCTACTTGAAAGGGTTGA+CGG - chr2.2:14109226-14109245 MS.gene87293:intron 35.0%
! AAGTAATGGAGCCCTATTTA+CGG - chr2.2:14113284-14113303 MS.gene87293:intron 35.0%
! ATGTGGTGAAATTAGGGTTT+TGG + chr2.2:14108539-14108558 None:intergenic 35.0%
! GTATACTTTTGAACAGAGTC+TGG - chr2.2:14109494-14109513 MS.gene87293:intron 35.0%
! GTTGTTGATTGAAGTCTAAG+TGG - chr2.2:14110990-14111009 MS.gene87293:intron 35.0%
! TCATAGGAAGGATTAGCATA+TGG - chr2.2:14113144-14113163 MS.gene87293:intron 35.0%
! TGTTTGTTGCTGTTAGTTTG+TGG - chr2.2:14111723-14111742 MS.gene87293:intron 35.0%
! TTAGGGTGGATTTCATAATG+TGG - chr2.2:14109330-14109349 MS.gene87293:intron 35.0%
! TTTCGAGAAACTCTCCATTT+TGG + chr2.2:14109775-14109794 None:intergenic 35.0%
! TTTTATGGCGTTAACATGAC+TGG - chr2.2:14113013-14113032 MS.gene87293:intron 35.0%
! TTTTGTACACAACAGAGCAA+AGG - chr2.2:14110441-14110460 MS.gene87293:intron 35.0%
! TTTTGTTCAAGTGTTTAGGG+TGG - chr2.2:14109316-14109335 MS.gene87293:intron 35.0%
!! AGCATGTACGTAGGTTTTAT+AGG - chr2.2:14113783-14113802 MS.gene87293:CDS 35.0%
!! ATGCCTACTTGTTATTCGAT+GGG - chr2.2:14110951-14110970 MS.gene87293:intron 35.0%
!! CTTGTAGACAAGTTTTATCG+GGG - chr2.2:14112296-14112315 MS.gene87293:intron 35.0%
!! GTTTCGACTGGGTTTTATAT+TGG - chr2.2:14113054-14113073 MS.gene87293:intron 35.0%
!! GTTTGTTGCTGTTAGTTTGT+GGG - chr2.2:14111724-14111743 MS.gene87293:intron 35.0%
!! TATGCCTACTTGTTATTCGA+TGG - chr2.2:14110950-14110969 MS.gene87293:intron 35.0%
!! TCTCAGGATTAGCTTTCTTA+TGG - chr2.2:14111162-14111181 MS.gene87293:CDS 35.0%
!! TTGGCTCTAAATCAATGAAC+TGG + chr2.2:14114016-14114035 None:intergenic 35.0%
!!! GCTCTCTGTTTTTTGTTATG+CGG - chr2.2:14109384-14109403 MS.gene87293:intron 35.0%
!!! GTAGGAATTTTTAGCAGTGT+TGG - chr2.2:14111853-14111872 MS.gene87293:intron 35.0%
!!! GTGAAATTAGGGTTTTGGAT+TGG + chr2.2:14108534-14108553 None:intergenic 35.0%
AAATGAACCAGTTTGCAACG+TGG + chr2.2:14109633-14109652 None:intergenic 40.0%
AACATCAAACCGTTCCAAAC+AGG + chr2.2:14110069-14110088 None:intergenic 40.0%
AAGGCAAAATAAGGAGAGCA+AGG + chr2.2:14111407-14111426 None:intergenic 40.0%
AAGGGAAAAACAGAGATGCT+TGG - chr2.2:14112319-14112338 MS.gene87293:intron 40.0%
AATAAACCTTGTTGCGTTGC+AGG + chr2.2:14108704-14108723 None:intergenic 40.0%
AATACGGACATTCACCTGTT+TGG - chr2.2:14110052-14110071 MS.gene87293:intron 40.0%
ACATTCAATGTCCTCAGGAT+AGG + chr2.2:14112164-14112183 None:intergenic 40.0%
ACCTCCGCATTTCTGAATAA+CGG + chr2.2:14111076-14111095 None:intergenic 40.0%
AGACCGTTTGAAAGAGCTTA+TGG + chr2.2:14109037-14109056 None:intergenic 40.0%
AGAGAAAAGGGTCTCAATCT+CGG + chr2.2:14110213-14110232 None:intergenic 40.0%
AGCACCAACAAACCGTAAAT+AGG + chr2.2:14113299-14113318 None:intergenic 40.0%
AGGTGATAGAGGGAATAGAT+TGG + chr2.2:14111656-14111675 None:intergenic 40.0%
AGTAGAAAATCCACCAAGGA+GGG + chr2.2:14110295-14110314 None:intergenic 40.0%
ATAGCCTCATTATGCATAGC+CGG + chr2.2:14113125-14113144 None:intergenic 40.0%
ATTGAACTGCTGTAGTTTGG+GGG - chr2.2:14109257-14109276 MS.gene87293:intron 40.0%
CAAACTGTCATGCACATGAT+AGG - chr2.2:14109873-14109892 MS.gene87293:intron 40.0%
CAAATCATTGTGCAGAGTCT+CGG + chr2.2:14110646-14110665 None:intergenic 40.0%
CACTAATTCCACTCTACCTA+TGG - chr2.2:14108440-14108459 MS.gene87293:CDS 40.0%
CAGTTAAAACCTGAAGGAAC+TGG - chr2.2:14110016-14110035 MS.gene87293:intron 40.0%
CAGTTATAAAACCTCCCACA+CGG + chr2.2:14111507-14111526 None:intergenic 40.0%
CATGTCATAGAGTTTCGACT+GGG - chr2.2:14113043-14113062 MS.gene87293:intron 40.0%
CATTAAGTTTCGATGCCCTA+TGG + chr2.2:14111457-14111476 None:intergenic 40.0%
CTTTGGCAAACAAACAGCTT+TGG + chr2.2:14110381-14110400 None:intergenic 40.0%
GAACAGTAGAAAATCCACCA+AGG + chr2.2:14110299-14110318 None:intergenic 40.0%
GCAAACCTGATGAGATTCTT+CGG + chr2.2:14108506-14108525 None:intergenic 40.0%
GCACCAACAAACCGTAAATA+GGG + chr2.2:14113298-14113317 None:intergenic 40.0%
GGGTAGGAGAGATAATACAA+AGG - chr2.2:14110158-14110177 MS.gene87293:intron 40.0%
GGGTTATAATTGTAACCGTG+TGG - chr2.2:14111489-14111508 MS.gene87293:intron 40.0%
GTGAATAAATCATCAGGCTC+CGG - chr2.2:14108592-14108611 MS.gene87293:intron 40.0%
TATAATTGTAACCGTGTGGG+AGG - chr2.2:14111493-14111512 MS.gene87293:intron 40.0%
TATCAATCGCATCACATCTC+TGG - chr2.2:14113416-14113435 MS.gene87293:intron 40.0%
TCAACACACGTTCACGTTAA+AGG - chr2.2:14109167-14109186 MS.gene87293:intron 40.0%
TCAACTTATACGAGCTCTCA+AGG + chr2.2:14109012-14109031 None:intergenic 40.0%
TCACACGATGAGTTATCCTT+CGG - chr2.2:14111971-14111990 MS.gene87293:intron 40.0%
TCCTCAGCATAATGAGTCTT+TGG + chr2.2:14114035-14114054 None:intergenic 40.0%
TCTGCAGCAAGATCTTCTAA+GGG + chr2.2:14111579-14111598 None:intergenic 40.0%
TGAGGACATTAGTAACATGG+AGG - chr2.2:14114049-14114068 MS.gene87293:CDS 40.0%
TGCTGAGGACATTAGTAACA+TGG - chr2.2:14114046-14114065 MS.gene87293:CDS 40.0%
TGGTCATGAGCTGGTAAATA+CGG - chr2.2:14110036-14110055 MS.gene87293:intron 40.0%
TTCTGCAGCAAGATCTTCTA+AGG + chr2.2:14111580-14111599 None:intergenic 40.0%
! AGCCCATAACTTGCAACAAT+AGG + chr2.2:14113697-14113716 None:intergenic 40.0%
! ATCACATCTCTGGAAAGCAT+GGG - chr2.2:14113426-14113445 MS.gene87293:intron 40.0%
! GCCCATAACTTGCAACAATA+GGG + chr2.2:14113696-14113715 None:intergenic 40.0%
! GGAAAAGCACACGTTCATAT+AGG - chr2.2:14111195-14111214 MS.gene87293:CDS 40.0%
! GGCCAAAGCATCAAAGAAAA+AGG - chr2.2:14109556-14109575 MS.gene87293:intron 40.0%
! TGATGAAGGTACACTTGAAG+AGG - chr2.2:14111303-14111322 MS.gene87293:intron 40.0%
! TTCCATTAATCAGATGGTGG+TGG + chr2.2:14109104-14109123 None:intergenic 40.0%
!! AGACAAGTTTTATCGGGGAA+GGG - chr2.2:14112301-14112320 MS.gene87293:intron 40.0%
!! CAGTTCCTTCAGGTTTTAAC+TGG + chr2.2:14110018-14110037 None:intergenic 40.0%
!! TAGACAAGTTTTATCGGGGA+AGG - chr2.2:14112300-14112319 MS.gene87293:intron 40.0%
!! TATTTTGTCAGGTCGGCTTT+CGG - chr2.2:14113872-14113891 MS.gene87293:intron 40.0%
!! TGCCTACTTGTTATTCGATG+GGG - chr2.2:14110952-14110971 MS.gene87293:intron 40.0%
AACCTGATGAGATTCTTCGG+AGG + chr2.2:14108503-14108522 None:intergenic 45.0%
AAGCCAAAGCTCAAAAGGCT+AGG - chr2.2:14111224-14111243 MS.gene87293:CDS 45.0%
AAGTGAGTGCAAGTCCTATG+AGG - chr2.2:14110496-14110515 MS.gene87293:intron 45.0%
ACCGTTATTCAGAAATGCGG+AGG - chr2.2:14111072-14111091 MS.gene87293:intron 45.0%
ACCTACGTACATGCTAGAGT+AGG + chr2.2:14113778-14113797 None:intergenic 45.0%
AGAAAGATCAGCCTATCCTG+AGG - chr2.2:14112150-14112169 MS.gene87293:intron 45.0%
AGAGGAAGCCAAAGCTCAAA+AGG - chr2.2:14111219-14111238 MS.gene87293:CDS 45.0%
AGATGCCATGTCATTCGCAA+GGG - chr2.2:14113603-14113622 MS.gene87293:intron 45.0%
AGCCAAAGCTCAAAAGGCTA+GGG - chr2.2:14111225-14111244 MS.gene87293:CDS 45.0%
AGGAACTCAAAAGGCAAGAG+AGG - chr2.2:14109576-14109595 MS.gene87293:intron 45.0%
AGTGTCATCAAAACCCTCCT+TGG - chr2.2:14110279-14110298 MS.gene87293:intron 45.0%
ATGAGGATTGAGAATCGCGA+TGG + chr2.2:14108471-14108490 None:intergenic 45.0%
CACCACCACCATCTGATTAA+TGG - chr2.2:14109099-14109118 MS.gene87293:intron 45.0%
CAGCAAGTAGTTAGACAGCT+TGG + chr2.2:14112716-14112735 None:intergenic 45.0%
CAGTAGAAAATCCACCAAGG+AGG + chr2.2:14110296-14110315 None:intergenic 45.0%
CCAGTCGAAACTCTATGACA+TGG + chr2.2:14113045-14113064 None:intergenic 45.0%
CCATGTCATAGAGTTTCGAC+TGG - chr2.2:14113042-14113061 MS.gene87293:intron 45.0%
CCTGAGACTAAACCAGAACA+AGG + chr2.2:14111149-14111168 None:intergenic 45.0%
CTGCGTTAGAGTTTGACAAG+TGG - chr2.2:14111260-14111279 MS.gene87293:intron 45.0%
CTTAGATCACTCACTGCCAT+CGG - chr2.2:14112057-14112076 MS.gene87293:intron 45.0%
GAAAGTGACAATGAAGCTGC+TGG - chr2.2:14109521-14109540 MS.gene87293:intron 45.0%
GAGCCCTATTTACGGTTTGT+TGG - chr2.2:14113292-14113311 MS.gene87293:intron 45.0%
GCACACGTTCATATAGGAAG+AGG - chr2.2:14111201-14111220 MS.gene87293:CDS 45.0%
GCCAAAGACTCATTATGCTG+AGG - chr2.2:14114031-14114050 MS.gene87293:CDS 45.0%
GGAACTCAAAAGGCAAGAGA+GGG - chr2.2:14109577-14109596 MS.gene87293:intron 45.0%
GGACATTCACCTGTTTGGAA+CGG - chr2.2:14110057-14110076 MS.gene87293:intron 45.0%
GTGAGTCAACATCCTTGTTC+TGG - chr2.2:14111134-14111153 MS.gene87293:CDS 45.0%
TAAAAGGGGAGGGTTGTGTT+AGG + chr2.2:14113090-14113109 None:intergenic 45.0%
TAGATGCCATGTCATTCGCA+AGG - chr2.2:14113602-14113621 MS.gene87293:intron 45.0%
TCCCCCATCGAATAACAAGT+AGG + chr2.2:14110957-14110976 None:intergenic 45.0%
TCTAAGTGCCCAATGGCTTA+TGG + chr2.2:14112043-14112062 None:intergenic 45.0%
TCTTGAACTAGTGTTTCCCC+TGG - chr2.2:14110893-14110912 MS.gene87293:CDS 45.0%
TGAGTGATCTAAGTGCCCAA+TGG + chr2.2:14112050-14112069 None:intergenic 45.0%
TTCAGAAATGCGGAGGTTGA+AGG - chr2.2:14111079-14111098 MS.gene87293:intron 45.0%
TTCCTCCGAAGAATCTCATC+AGG - chr2.2:14108498-14108517 MS.gene87293:CDS 45.0%
TTCGGAGGAAGATGAAGATG+AGG + chr2.2:14108488-14108507 None:intergenic 45.0%
TTCTCACTTTGGGCTGTCTA+GGG - chr2.2:14113826-14113845 MS.gene87293:CDS 45.0%
TTGTGGGAGAAACAGTGTCA+CGG - chr2.2:14111740-14111759 MS.gene87293:intron 45.0%
TTTAGATAAAGGGGGGGCAA+AGG - chr2.2:14110122-14110141 MS.gene87293:intron 45.0%
TTTCTCACTTTGGGCTGTCT+AGG - chr2.2:14113825-14113844 MS.gene87293:CDS 45.0%
TTTGAAAGGCCGAAGAAGCT+CGG - chr2.2:14111036-14111055 MS.gene87293:intron 45.0%
! ACACAACCCTCCCCTTTTAT+TGG - chr2.2:14113091-14113110 MS.gene87293:intron 45.0%
! CACAACCCTCCCCTTTTATT+GGG - chr2.2:14113092-14113111 MS.gene87293:intron 45.0%
! CATCACATCTCTGGAAAGCA+TGG - chr2.2:14113425-14113444 MS.gene87293:intron 45.0%
! CTGCAATGAGAAGTGTAGAG+AGG + chr2.2:14108420-14108439 None:intergenic 45.0%
! TTCGGGTGTCATGGATGATA+GGG - chr2.2:14113890-14113909 MS.gene87293:intron 45.0%
! TTGTTATTCGATGGGGGAGA+GGG - chr2.2:14110959-14110978 MS.gene87293:intron 45.0%
! TTTCGGGTGTCATGGATGAT+AGG - chr2.2:14113889-14113908 MS.gene87293:intron 45.0%
!! ATTTTGTCAGGTCGGCTTTC+GGG - chr2.2:14113873-14113892 MS.gene87293:intron 45.0%
!! CATTAATCAGATGGTGGTGG+TGG + chr2.2:14109101-14109120 None:intergenic 45.0%
!! CCTTGTTCTGGTTTAGTCTC+AGG - chr2.2:14111146-14111165 MS.gene87293:CDS 45.0%
!! GCCTACTTGTTATTCGATGG+GGG - chr2.2:14110953-14110972 MS.gene87293:intron 45.0%
!! GGGTTTTGATGACACTCTCA+AGG + chr2.2:14110275-14110294 None:intergenic 45.0%
!! TTCCCTAGCCTTTTGAGCTT+TGG + chr2.2:14111230-14111249 None:intergenic 45.0%
!! AACAATTAAATAATATTTAA+TGG + chr2.2:14110834-14110853 None:intergenic 5.0%
AAACCTTGTTGCGTTGCAGG+CGG + chr2.2:14108701-14108720 None:intergenic 50.0%
AAGGTTTCTGCTGGCACTCA+TGG + chr2.2:14110332-14110351 None:intergenic 50.0%
AATCGCGATGGCGTTTCCAT+AGG + chr2.2:14108459-14108478 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTATA+TGG + chr2.2:14113201-14113220 None:intergenic 50.0%
AGAGTCTACGCAAGATCAGG+AGG - chr2.2:14112441-14112460 MS.gene87293:intron 50.0%
AGCTCAAAAGGCTAGGGAAG+AGG - chr2.2:14111231-14111250 MS.gene87293:CDS 50.0%
AGCTCATGACCAGTTCCTTC+AGG + chr2.2:14110028-14110047 None:intergenic 50.0%
AGGTACACTTGAAGAGGAGC+AGG - chr2.2:14111309-14111328 MS.gene87293:intron 50.0%
ATATAGCCGACCCCACTTAG+TGG - chr2.2:14113200-14113219 MS.gene87293:intron 50.0%
CCAAGCCCAATAAAAGGGGA+GGG + chr2.2:14113100-14113119 None:intergenic 50.0%
CCAGTTTGCAACGTGGAATG+AGG + chr2.2:14109626-14109645 None:intergenic 50.0%
CCTCATTCCACGTTGCAAAC+TGG - chr2.2:14109623-14109642 MS.gene87293:intron 50.0%
CGGTCCCAAGCCCAATAAAA+GGG + chr2.2:14113105-14113124 None:intergenic 50.0%
CTTTGACTGCCGAGCTTCTT+CGG + chr2.2:14111048-14111067 None:intergenic 50.0%
GACAGCTGACATCTCAGCAT+AGG + chr2.2:14112674-14112693 None:intergenic 50.0%
GAGCAGAAGAAGGTTTCTGC+TGG + chr2.2:14110341-14110360 None:intergenic 50.0%
GATATTAGTGGGATGGCCGA+TGG + chr2.2:14112076-14112095 None:intergenic 50.0%
GCAAAGGAGGAGGAAGAATG+GGG - chr2.2:14110138-14110157 MS.gene87293:intron 50.0%
GCCTACTCTAGCATGTACGT+AGG - chr2.2:14113774-14113793 MS.gene87293:CDS 50.0%
GGCAAAGGAGGAGGAAGAAT+GGG - chr2.2:14110137-14110156 MS.gene87293:intron 50.0%
GGTCCCAAGCCCAATAAAAG+GGG + chr2.2:14113104-14113123 None:intergenic 50.0%
GTCATCAAAACCCTCCTTGG+TGG - chr2.2:14110282-14110301 MS.gene87293:intron 50.0%
TATAGCCGACCCCACTTAGT+GGG - chr2.2:14113201-14113220 MS.gene87293:intron 50.0%
TCAAGCCCTTGCGAATGACA+TGG + chr2.2:14113611-14113630 None:intergenic 50.0%
TCGAGAGTCTACGCAAGATC+AGG - chr2.2:14112438-14112457 MS.gene87293:intron 50.0%
TCTCACTTTGGGCTGTCTAG+GGG - chr2.2:14113827-14113846 MS.gene87293:CDS 50.0%
TGAAGGAACTGGTCATGAGC+TGG - chr2.2:14110027-14110046 MS.gene87293:intron 50.0%
TGGCGTTTCCATAGGTAGAG+TGG + chr2.2:14108451-14108470 None:intergenic 50.0%
TGTGGGAGAAACAGTGTCAC+GGG - chr2.2:14111741-14111760 MS.gene87293:intron 50.0%
TGTTATTCGATGGGGGAGAG+GGG - chr2.2:14110960-14110979 MS.gene87293:intron 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG + chr2.2:14113213-14113232 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG + chr2.2:14113214-14113233 None:intergenic 50.0%
! CCTCCCCTTTTATTGGGCTT+GGG - chr2.2:14113098-14113117 MS.gene87293:intron 50.0%
! CCTTTTATTGGGCTTGGGAC+CGG - chr2.2:14113103-14113122 MS.gene87293:intron 50.0%
! GTTGAAGGATGAAGAGCGTG+AGG - chr2.2:14111094-14111113 MS.gene87293:intron 50.0%
! TCGGGTGTCATGGATGATAG+GGG - chr2.2:14113891-14113910 MS.gene87293:intron 50.0%
!! CTTGTTATTCGATGGGGGAG+AGG - chr2.2:14110958-14110977 MS.gene87293:intron 50.0%
AGATAAAGGGGGGGCAAAGG+AGG - chr2.2:14110125-14110144 MS.gene87293:intron 55.0%
AGGAGGAGGAAGAATGGGGT+AGG - chr2.2:14110142-14110161 MS.gene87293:intron 55.0%
CCACTTAGTGGGACAAGGCT+TGG - chr2.2:14113212-14113231 MS.gene87293:intron 55.0%
CCCAAGCCCAATAAAAGGGG+AGG + chr2.2:14113101-14113120 None:intergenic 55.0%
CCGGTCCCAAGCCCAATAAA+AGG + chr2.2:14113106-14113125 None:intergenic 55.0%
CGTGCAGCAGGTTCTCTAAC+CGG + chr2.2:14108614-14108633 None:intergenic 55.0%
CTTGTCCCACTAAGTGGGGT+CGG + chr2.2:14113209-14113228 None:intergenic 55.0%
GCTCGAGAGTGAGCAGAAGA+AGG + chr2.2:14110351-14110370 None:intergenic 55.0%
GGGACCGGCTATGCATAATG+AGG - chr2.2:14113118-14113137 MS.gene87293:intron 55.0%
GGGCAAAGGAGGAGGAAGAA+TGG - chr2.2:14110136-14110155 MS.gene87293:intron 55.0%
GTCTACGCAAGATCAGGAGG+TGG - chr2.2:14112444-14112463 MS.gene87293:intron 55.0%
GTTATTCGATGGGGGAGAGG+GGG - chr2.2:14110961-14110980 MS.gene87293:intron 55.0%
TCTCGGCTGAGAGGCTACAA+TGG + chr2.2:14110196-14110215 None:intergenic 55.0%
TTATTCGATGGGGGAGAGGG+GGG - chr2.2:14110962-14110981 MS.gene87293:intron 55.0%
! AGCTGCTGGTGATGAGCATG+AGG - chr2.2:14109535-14109554 MS.gene87293:intron 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG + chr2.2:14113215-14113234 None:intergenic 55.0%
! CCCTCCCCTTTTATTGGGCT+TGG - chr2.2:14113097-14113116 MS.gene87293:intron 55.0%
! TGAGGCACAGGAGCGTAAGT+TGG - chr2.2:14111112-14111131 MS.gene87293:CDS 55.0%
CAACCGTTCTCCGACGCATG+CGG + chr2.2:14108652-14108671 None:intergenic 60.0%
CGACCCCACTTAGTGGGACA+AGG - chr2.2:14113207-14113226 MS.gene87293:intron 60.0%
GGCAAGAGAGGGAAGCTCGA+CGG - chr2.2:14109588-14109607 MS.gene87293:intron 60.0%
GGGTCTCAATCTCGGCTGAG+AGG + chr2.2:14110205-14110224 None:intergenic 60.0%
TAAAGGGGGGGCAAAGGAGG+AGG - chr2.2:14110128-14110147 MS.gene87293:intron 60.0%
! AGGTCGGCTTTCGGGTGTCA+TGG - chr2.2:14113881-14113900 MS.gene87293:intron 60.0%
! GGATGAAGAGCGTGAGGCAC+AGG - chr2.2:14111100-14111119 MS.gene87293:intron 60.0%
AGAGAGGGAAGCTCGACGGC+AGG - chr2.2:14109592-14109611 MS.gene87293:intron 65.0%
CGTCGGAGAACGGTTGCGTC+TGG - chr2.2:14108656-14108675 MS.gene87293:intron 65.0%
GCTCCGCCTGCAACGCAACA+AGG - chr2.2:14108695-14108714 MS.gene87293:intron 65.0%
TCGCCGCATGCGTCGGAGAA+CGG - chr2.2:14108646-14108665 MS.gene87293:intron 65.0%
ACGCATGCGGCGAGTAGCGG+TGG + chr2.2:14108639-14108658 None:intergenic 70.0%
CCGACGCATGCGGCGAGTAG+CGG + chr2.2:14108642-14108661 None:intergenic 70.0%
CCGCTACTCGCCGCATGCGT+CGG - chr2.2:14108639-14108658 MS.gene87293:intron 70.0%
GTAGCGGTGGCACGTGCAGC+AGG + chr2.2:14108626-14108645 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 14108394 14114088 14108394 ID=MS.gene87293
chr2.2 mRNA 14108394 14114088 14108394 ID=MS.gene87293.t1;Parent=MS.gene87293
chr2.2 exon 14113963 14114088 14113963 ID=MS.gene87293.t1.exon1;Parent=MS.gene87293.t1
chr2.2 CDS 14113963 14114088 14113963 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14113766 14113874 14113766 ID=MS.gene87293.t1.exon2;Parent=MS.gene87293.t1
chr2.2 CDS 14113766 14113874 14113766 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14112869 14112972 14112869 ID=MS.gene87293.t1.exon3;Parent=MS.gene87293.t1
chr2.2 CDS 14112869 14112972 14112869 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14111349 14111438 14111349 ID=MS.gene87293.t1.exon4;Parent=MS.gene87293.t1
chr2.2 CDS 14111349 14111438 14111349 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14111107 14111265 14111107 ID=MS.gene87293.t1.exon5;Parent=MS.gene87293.t1
chr2.2 CDS 14111107 14111265 14111107 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14110865 14110921 14110865 ID=MS.gene87293.t1.exon6;Parent=MS.gene87293.t1
chr2.2 CDS 14110865 14110921 14110865 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14109035 14109071 14109035 ID=MS.gene87293.t1.exon7;Parent=MS.gene87293.t1
chr2.2 CDS 14109035 14109071 14109035 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
chr2.2 exon 14108394 14108599 14108394 ID=MS.gene87293.t1.exon8;Parent=MS.gene87293.t1
chr2.2 CDS 14108394 14108599 14108394 ID=cds.MS.gene87293.t1;Parent=MS.gene87293.t1
Gene Sequence

>MS.gene87293

ATGGATGATTTTTTCGTAGCAATCCTCTCTACACTTCTCATTGCAGCACTAATTCCACTCTACCTATGGAAACGCCATCGCGATTCTCAATCCTCATCTTCATCTTCCTCCGAAGAATCTCATCAGGTTTGCAATTCCCAATCCAAAACCCTAATTTCACCACATTTTAACAATAAAACTCGAATTCTTAGTTTAATTGTGAATAAATCATCAGGCTCCGGTTAGAGAACCTGCTGCACGTGCCACCGCTACTCGCCGCATGCGTCGGAGAACGGTTGCGTCTGGTGCTAGCTCTTCATCAGCTCCGCCTGCAACGCAACAAGGTTTATTGATCGTTTTGATTTAATTTTGATTTAATTTTATTTGTGTTTGGTATTGCATGATGGTGTTTTATGATTGATGGATTAGAATAAATAATTGAATTAATTCTTGTTTGGATAAACAGCTTAATTAAACGATTTTCGTATAATTGTTAATGCTTATGTATACACTATTTGCATAACAAAAGATGAAATACTGTCAAAATGTTTTTATATAAAGCTGCAAGTTGTTTTTATAAGTTATCATGGAGAGCTTGTGTAAATAAGCTAAAAACAAGTTGTTTTTGTAAGCTATCCTTGAGAGCTCGTATAAGTTGATTCCATAAGCTCTTTCAAACGGTCTCACAAATGTTTATATCAGTAAATAAGATCAAGTAAGTCAATCCACCACCACCATCTGATTAATGGAATTTTATTGTGAAAATGAAGAAGCTACAATATGTAGCTTGTAAATCAACACACGTTCACGTTAAAGGCAATGTTAAAAACAAACACATACTAAGTTGTGTAGTTTTCTACTTGAAAGGGTTGACGGACTTGAAAATTGAACTGCTGTAGTTTGGGGGATCTTTGTGACATTCCTTTTCTTTTCCATTTCACTATTTTGTTCAAGTGTTTAGGGTGGATTTCATAATGTGGAGTCAAGTCAACTACTTGCCATTGTTATTTGGCTCTCTGTTTTTTGTTATGCGGAAATATTGTTAAACTAGTACTGCTTTGTGGGAATAATGTTCATGGATTGCATCTTGAAATCGAGTTGCATTTGTGAAGTGATCAACTGTATACTTTTGAACAGAGTCTGGAGATGAAAGTGACAATGAAGCTGCTGGTGATGAGCATGAGGCCAAAGCATCAAAGAAAAAGGAACTCAAAAGGCAAGAGAGGGAAGCTCGACGGCAGGTATTCTTTCCTCATTCCACGTTGCAAACTGGTTCATTTATCTATTGTTAGTTTTATTCATTATTAAAGACACTAAGATATTCATTTGTCTGGCTTCTTGTTATTCGCAATGTGTTCAGAACCTGTGTCTAAGAGCATAATGATTTAAATTTGACTAACCAAAATGGAGAGTTTCTCGAAATGAAAGATGTTATGTGTATATGAAGGTTTAATAAGGTTACTGACATTTATAAATTGTGTAAATTATCAAACTATTGTTCAAACTGTCATGCACATGATAGGATTACTTTGAGGAATACTCTACAGACATGATATTCAGATATTGGTGAAAAATATATTATTCAAGACATCATCCCAAAACTGTATCGGACAATTAACCTATAGAATTTCTCTGCTAACAACCAGTTAAAACCTGAAGGAACTGGTCATGAGCTGGTAAATACGGACATTCACCTGTTTGGAACGGTTTGATGTTGAGACTTTTTTGAAAAATAAAAGGAAATAATATTTTAGATAAAGGGGGGGCAAAGGAGGAGGAAGAATGGGGTAGGAGAGATAATACAAAGGATAATTTGGCTTCCATTGTAGCCTCTCAGCCGAGATTGAGACCCTTTTCTCTTCTCTATCTCCAAAACATGACCTTCTTTTAACCAATTAACCTTGAGAGTGTCATCAAAACCCTCCTTGGTGGATTTTCTACTGTTCTTTGCTTCAGCCATGAGTGCCAGCAGAAACCTTCTTCTGCTCACTCTCGAGCTAAACAACCAAAGCTGTTTGTTTGCCAAAGATCTTCACTAGAATGAACCCATCTCATAAATCAAAATCTGTTTTGTACACAACAGAGCAAAGGTACTGATAACAGAACAATAAACAAGTGGGAGAAAGTGAGTGCAAGTCCTATGAGGACATCAATAGTTTAATTTTGTTCTCAGGTCATCACTCATTATTAAAAATGGGTACAATGATTAAACAGCACTATATTGTTGCGGCCATGACTCTATTTTATGCAATACCCTATTGTTTAGTAATCCGAGACTCTGCACAATGATTTGACAACACTAGCAGTTGATTATTATGCCATCAATTTGTTGCCTTTTCTTACTTGTTATTTGTGATTTTAAAATATTACTGCATGCAATTTTTTATTCTTTGAAATTATAAATATTCTAATTCTAAATATAATTTTTTGACTAATATTTAGTATATTATATAAAATTCCATTAAATATTATTTAATTGTTAACAGTTCAACATGATTTTATCGCAATTAGAGCATTAAATCTTGAACTAGTGTTTCCCCTGGTTAAATGATTAGTTAGTTTTTTATATATTGTATGTATGCCTACTTGTTATTCGATGGGGGAGAGGGGGGTCTATGTTGTTGATTGAAGTCTAAGTGGTTGATTAGATTTTGGTACTTCTTTTTGAAAGGCCGAAGAAGCTCGGCAGTCAAAGCAAGACCGTTATTCAGAAATGCGGAGGTTGAAGGATGAAGAGCGTGAGGCACAGGAGCGTAAGTTGGTGAGTCAACATCCTTGTTCTGGTTTAGTCTCAGGATTAGCTTTCTTATGGTCTATTGATCGGAAAAGCACACGTTCATATAGGAAGAGGAAGCCAAAGCTCAAAAGGCTAGGGAAGAGGAAGCTGCTGCGTTAGAGTTTGACAAGTGGAAAGGTGAATTTTCAGTTGATGATGAAGGTACACTTGAAGAGGAGCAGGATAAAACTGAAGATTTGCTTACCAATTTTGTTGAATATATAAAGGTTATTTTCTGTTTTGTACTTTCTATATCCTTGCTCTCCTTATTTTGCCTTGATAAGTTGTCAAAAGTTTATTTATGTCCATAGGGCATCGAAACTTAATGATAATTAGCTAAGGGTTATAATTGTAACCGTGTGGGAGGTTTTATAACTGTTCTAATTTAGACAAATTTTGTGTAATTATTCAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGCACACAGGTATTCTTTCTATTCTTTTCCTTTTTCTGAATTGACCAATCTATTCCCTCTATCACCTCTTCTTTTTTATATTCTATTCCCTCTATCACCTCTTCTTTTTTATATTGTTTGTTGCTGTTAGTTTGTGGGAGAAACAGTGTCACGGGATAACAAACTCTGCTATGCCAGTATGTTTAATGATTTATATGATAGATCTTTTGTATCTAGTTTTACTTTTCTACTTACATATTTAGTTGTAGGAATTTTTAGCAGTGTTGGCAGAAAACAAGTGAAAAGACAATGGGAAAACAAAGGGTGATGTAATAGAGAACATAGTATTCCACTATTTACAGAGATTGGTTATATACAGTTATTCACACGATGAGTTATCCTTCGGTTTATATTAACAAACATGACTAGTATTATACAGGGACTCTTATACTCCATAAGCCATTGGGCACTTAGATCACTCACTGCCATCGGCCATCCCACTAATATCTAACTTCTTTTCCCAAACATTATTAATTGGAAGTTAGTATAAAATATAAAAATTAGAAAGATCAGCCTATCCTGAGGACATTGAATGTTTTTAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGATTTTTTATCTTACATTTTGTAATGGAAGCTAGGGAGAACCAAATGTTCAACATAGATGATATCACTATGATATCTTGTAGACAAGTTTTATCGGGGAAGGGAAAAACAGAGATGCTTGGCAGAAAACATAATAATCAATTGTTTAATTCGTGGGTGATCATATATTTATATTAATAATGCTGCTATACAAAGACTTGTACCCAATGTTTTAAAAATCGAGAGTCTACGCAAGATCAGGAGGTGGTTGAAAGATCGTAATTCAAGAATCATATCACAGATTCTGATAGGGAAAATATATACTTATTATATACTGTTAAAAGTTGATATTCATAGAGATGAGGAGAATCAGCTAGAGAGAGTGATTGTGTAACTAAATCTTGTGATTCTCAATTGCATGGAAACTGTGATGATTACAAGTATTTATACACTGTTAGAATCGTAGTGAACTCCTATGCTGAGATGTCAGCTGTCATAACTACTTGACAGCTGTCCAAGCTGTCTAACTACTTGCTGAGCAAGTTAAGATTCAGTTAAACTAAGCCTAGGTATATTTGCTAATATGCTAAGCTGTATTTCCTAATACATACATATAATTAAATACACATGCACAAAAATCTCTTAAGGATACAAGAAACAATCTCTTAAGTTTGGGATCCTTAAGTTTATAGAATATTTATATACAAGGATACAAGAAACAATATCTTAAAGTTTGGGATTACGTAAGGATAAGATACAACAGAATCAAACCTGAACCATATTTCAATAGGATGATGTCTCGACTACTTTATAATTTTATGGCGTTAACATGACTGGTCAGATCCATGTCATAGAGTTTCGACTGGGTTTTATATTGGCTGACGACTGCCTAACACAACCCTCCCCTTTTATTGGGCTTGGGACCGGCTATGCATAATGAGGCTATCATAGGAAGGATTAGCATATGGTTTATGATAGAACGTTATGGCATAATTTGATCCATATAGCCGACCCCACTTAGTGGGACAAGGCTTGGTTGTTGTTGTTCTTGAAACTGACTGATCGGATCCTTTTCTAATGTTTCTAAGTAATGGAGCCCTATTTACGGTTTGTTGGTGCTCTTTCAATTTGTTCATGAATCAATTTAATATATCTAAGTAATATATTTTTCATTTTCGGGGTTCTTTTTTATGACACTGTAAACTTATGCAGGAATGTATCAATCGCATCACATCTCTGGAAAGCATGGGTAAGAGCCTTTCGTGTATCCTTTCTTTTAAATTACCATCTATCAAAAGAAATATATACACTTTCCCTTGGTTTATTTTTCATCATAGTTCTTGTCTTCTCCATTACCATCTACTCCTTTTGAATTCATATACAATCAATTTACCATGTTAGATTAGATGCCATGTCATTCGCAAGGGCTTGAATAAGTAGAAGAAATATTTGACATAATTGGGACTGCTAATTTTTTATTTATAATGACTTATACCCTATTGTTGCAAGTTATGGGCTGTCTATACTCTTATTGATTTTAGTTAGAAGTTTCCTACAAAAATAGCTAGGTTTTATGCCTACTCTAGCATGTACGTAGGTTTTATAGGTGTATCAAATGGAAGTTTTTTTCTCACTTTGGGCTGTCTAGGGGCAAACATAAATAATGATTTATTTATTTTGTCAGGTCGGCTTTCGGGTGTCATGGATGATAGGGGAAAATTCATTTACATCTCACAGGAAGAGATGAAAGCTGTTGCTGATTATATTAAGCGACAAGGGAGGGTTAGCATTTCCCATTTAGCTAGTAAATCAAACCAGTTCATTGATTTAGAGCCAAAGACTCATTATGCTGAGGACATTAGTAACATGGAGGAGATAACTGTCAACTGA
Protein sequence

>MS.gene87293.t1

MDDFFVAILSTLLIAALIPLYLWKRHRDSQSSSSSSSEESHQAPVREPAARATATRRMRRRTVASGASSSSAPPATQQESGDESDNEAAGDEHEAKASKKKELKRQEREARRQAEEARQSKQDRYSEMRRLKDEEREAQERKLEEEAKAQKAREEEAAALEFDKWKGEFSVDDEGTLEEEQDKTEDLLTNFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTHYAEDISNMEEITVN