AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05308


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05308.t1 MTR_6g080360 92.110 1052 73 5 1 1049 1 1045 0.0 1888
MS.gene05308.t1 MTR_6g080360 89.818 825 72 4 227 1049 11 825 0.0 1493
MS.gene05308.t1 MTR_7g061330 39.860 143 84 2 485 625 64 206 3.33e-25 112
MS.gene05308.t1 MTR_7g061330 36.364 154 96 2 430 582 62 214 2.62e-22 102
MS.gene05308.t1 MTR_7g061330 38.596 114 66 3 516 625 42 155 6.89e-15 79.3
MS.gene05308.t1 MTR_7g061330 34.351 131 83 3 398 528 83 210 2.88e-14 77.4
MS.gene05308.t1 MTR_7g461410 39.860 143 84 2 485 625 64 206 3.33e-25 112
MS.gene05308.t1 MTR_7g461410 36.364 154 96 2 430 582 62 214 2.62e-22 102
MS.gene05308.t1 MTR_7g461410 38.596 114 66 3 516 625 42 155 6.89e-15 79.3
MS.gene05308.t1 MTR_7g461410 34.351 131 83 3 398 528 83 210 2.88e-14 77.4
MS.gene05308.t1 MTR_7g061330 39.860 143 84 2 485 625 28 170 3.36e-25 111
MS.gene05308.t1 MTR_7g061330 36.364 154 96 2 430 582 26 178 2.71e-22 102
MS.gene05308.t1 MTR_7g061330 38.679 106 61 3 524 625 14 119 1.93e-14 77.8
MS.gene05308.t1 MTR_7g061330 34.351 131 83 3 398 528 47 174 3.71e-14 77.0
MS.gene05308.t1 MTR_3g110028 38.889 144 86 2 484 625 35 178 1.21e-23 108
MS.gene05308.t1 MTR_3g110028 34.667 150 96 2 430 578 34 182 1.23e-21 102
MS.gene05308.t1 MTR_3g110028 33.588 131 84 3 398 528 55 182 3.79e-15 80.9
MS.gene05308.t1 MTR_3g110028 41.053 95 54 2 533 625 33 127 6.90e-12 70.5
MS.gene05308.t1 MTR_1g026870 37.500 144 88 2 484 625 35 178 7.98e-23 105
MS.gene05308.t1 MTR_1g026870 35.333 150 95 2 430 578 34 182 2.69e-22 104
MS.gene05308.t1 MTR_1g026870 32.824 131 85 3 398 528 55 182 2.65e-14 78.2
MS.gene05308.t1 MTR_1g026870 42.105 95 53 2 533 625 33 127 7.14e-13 73.6
MS.gene05308.t1 MTR_5g010650 38.926 149 86 3 482 625 55 203 2.28e-21 99.4
MS.gene05308.t1 MTR_5g010650 32.215 149 98 2 429 574 55 203 1.15e-17 87.8
MS.gene05308.t1 MTR_5g010650 32.773 119 78 2 406 524 87 203 1.88e-11 68.2
MS.gene05308.t1 MTR_7g037260 36.082 97 61 1 479 574 142 238 1.26e-14 77.0
MS.gene05308.t1 MTR_7g037260 38.333 120 68 2 531 649 143 257 8.04e-14 74.7
MS.gene05308.t1 MTR_4g088015 41.667 96 55 1 531 625 219 314 3.62e-14 76.6
MS.gene05308.t1 MTR_4g105660 41.176 102 57 2 525 625 174 273 5.78e-14 75.9
MS.gene05308.t1 MTR_4g105660 35.417 96 61 1 480 574 178 273 1.51e-11 68.2
MS.gene05308.t1 MTR_5g070020 38.298 94 57 1 533 625 122 215 1.88e-13 73.6
MS.gene05308.t1 MTR_5g070020 33.333 96 63 1 480 574 120 215 1.14e-12 71.2
MS.gene05308.t1 MTR_7g451170 34.694 98 63 1 478 574 187 284 1.91e-13 73.9
MS.gene05308.t1 MTR_7g451170 34.400 125 81 1 502 625 160 284 5.47e-12 69.7
MS.gene05308.t1 MTR_5g049190 33.884 121 70 2 531 641 17 137 1.17e-12 69.3
MS.gene05308.t1 MTR_7g037130 34.021 97 63 1 479 574 142 238 1.47e-12 70.9
MS.gene05308.t1 MTR_7g037130 37.500 96 59 1 531 625 143 238 2.73e-11 67.0
MS.gene05308.t1 MTR_6g027340 33.333 93 61 1 483 574 17 109 1.49e-12 68.2
MS.gene05308.t1 MTR_5g038910 36.264 91 57 1 485 574 29 119 1.59e-12 71.2
MS.gene05308.t1 MTR_7g450950 35.577 104 65 2 481 583 156 258 1.75e-12 70.5
MS.gene05308.t1 MTR_5g041570 34.409 93 60 1 483 574 135 227 1.89e-12 71.2
MS.gene05308.t1 MTR_5g041570 30.769 130 87 2 533 661 134 261 2.72e-12 70.5
MS.gene05308.t1 MTR_6g027370 33.684 95 62 1 481 574 98 192 2.10e-12 70.5
MS.gene05308.t1 MTR_5g038910 36.264 91 57 1 485 574 29 119 2.61e-12 70.9
MS.gene05308.t1 MTR_3g077650 39.362 94 56 1 533 625 181 274 2.72e-12 70.9
MS.gene05308.t1 MTR_4g094982 36.170 94 59 1 533 625 5 98 3.81e-12 68.6
MS.gene05308.t1 MTR_1g057980 30.952 126 85 2 478 602 76 200 4.00e-12 68.9
MS.gene05308.t1 MTR_3g463400 32.990 97 64 1 479 574 130 226 4.03e-12 70.1
MS.gene05308.t1 MTR_3g463400 35.294 102 65 1 525 625 125 226 6.45e-11 66.2
MS.gene05308.t1 MTR_4g019370 39.362 94 56 1 533 625 38 131 5.86e-12 68.9
MS.gene05308.t1 MTR_4g019370 32.323 99 66 1 481 578 37 135 8.05e-11 65.5
MS.gene05308.t1 MTR_4g082040 33.696 92 60 1 484 574 107 198 7.71e-12 69.3
MS.gene05308.t1 MTR_6g074860 31.522 92 62 1 484 574 6 97 8.02e-12 67.0
MS.gene05308.t1 MTR_8g468380 35.165 91 58 1 485 574 25 115 1.02e-11 68.9
MS.gene05308.t1 MTR_5g016510 37.234 94 58 1 533 625 5 98 1.83e-11 67.0
MS.gene05308.t1 MTR_7g035075 32.456 114 75 2 475 586 9 122 2.85e-11 64.7
MS.gene05308.t1 MTR_7g086960 36.957 92 57 1 484 574 91 182 4.25e-11 66.2
MS.gene05308.t1 MTR_6g027360 31.313 99 67 1 477 574 73 171 5.53e-11 65.5
MS.gene05308.t1 MTR_6g006030 32.432 111 73 2 475 583 9 119 7.47e-11 63.5
MS.gene05308.t1 MTR_7g115550 36.458 96 59 2 485 579 10 104 8.67e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05308.t1 AT3G18100 43.597 695 302 12 29 667 21 681 5.65e-175 533
MS.gene05308.t1 AT3G18100 53.700 473 204 4 205 667 1 468 8.56e-173 520
MS.gene05308.t1 AT3G18100 53.586 474 205 4 204 667 52 520 9.44e-173 522
MS.gene05308.t1 AT3G18100 39.936 626 294 13 116 667 16 633 1.44e-132 421
MS.gene05308.t1 AT5G11510 34.615 182 107 3 484 663 31 202 4.94e-27 119
MS.gene05308.t1 AT5G11510 34.000 150 97 2 430 578 30 178 6.66e-22 102
MS.gene05308.t1 AT5G11510 32.414 145 94 4 384 528 38 178 9.47e-15 79.7
MS.gene05308.t1 AT5G11510 34.615 182 107 3 484 663 31 202 4.94e-27 119
MS.gene05308.t1 AT5G11510 34.000 150 97 2 430 578 30 178 6.66e-22 102
MS.gene05308.t1 AT5G11510 32.414 145 94 4 384 528 38 178 9.47e-15 79.7
MS.gene05308.t1 AT5G11510 34.615 182 107 3 484 663 31 202 4.94e-27 119
MS.gene05308.t1 AT5G11510 34.000 150 97 2 430 578 30 178 6.66e-22 102
MS.gene05308.t1 AT5G11510 32.414 145 94 4 384 528 38 178 9.47e-15 79.7
MS.gene05308.t1 AT5G11510 34.615 182 107 3 484 663 31 202 6.32e-27 118
MS.gene05308.t1 AT5G11510 33.766 154 100 2 430 582 30 182 8.70e-22 102
MS.gene05308.t1 AT5G11510 32.414 145 94 4 384 528 38 178 1.19e-14 79.3
MS.gene05308.t1 AT5G11510 34.615 182 107 3 484 663 31 202 6.67e-27 118
MS.gene05308.t1 AT5G11510 33.766 154 100 2 430 582 30 182 9.63e-22 102
MS.gene05308.t1 AT5G11510 32.414 145 94 4 384 528 38 178 1.15e-14 79.3
MS.gene05308.t1 AT5G02320 39.161 143 85 2 485 625 18 160 2.09e-24 108
MS.gene05308.t1 AT5G02320 34.615 156 100 2 430 584 16 170 9.01e-23 103
MS.gene05308.t1 AT5G02320 40.000 105 59 3 525 625 5 109 2.53e-15 80.5
MS.gene05308.t1 AT5G02320 33.846 130 83 3 399 528 38 164 5.33e-15 79.7
MS.gene05308.t1 AT5G02320 39.161 143 85 2 485 625 78 220 3.64e-24 108
MS.gene05308.t1 AT5G02320 34.615 156 100 2 430 584 76 230 1.39e-22 103
MS.gene05308.t1 AT5G02320 40.000 105 59 3 525 625 65 169 3.09e-15 80.5
MS.gene05308.t1 AT5G02320 33.846 130 83 3 399 528 98 224 6.09e-15 79.7
MS.gene05308.t1 AT5G02320 39.161 143 85 2 485 625 78 220 3.64e-24 108
MS.gene05308.t1 AT5G02320 34.615 156 100 2 430 584 76 230 1.39e-22 103
MS.gene05308.t1 AT5G02320 40.000 105 59 3 525 625 65 169 3.09e-15 80.5
MS.gene05308.t1 AT5G02320 33.846 130 83 3 399 528 98 224 6.09e-15 79.7
MS.gene05308.t1 AT3G09370 39.161 143 85 2 485 625 86 228 1.32e-23 106
MS.gene05308.t1 AT3G09370 36.667 150 93 2 430 578 84 232 6.97e-22 101
MS.gene05308.t1 AT3G09370 44.000 100 52 3 530 625 78 177 1.27e-15 81.6
MS.gene05308.t1 AT3G09370 34.615 130 82 3 399 528 106 232 2.69e-14 77.4
MS.gene05308.t1 AT3G09370 39.161 143 85 2 485 625 81 223 1.56e-23 106
MS.gene05308.t1 AT3G09370 36.667 150 93 2 430 578 79 227 7.16e-22 101
MS.gene05308.t1 AT3G09370 44.000 100 52 3 530 625 73 172 1.39e-15 81.6
MS.gene05308.t1 AT3G09370 34.615 130 82 3 399 528 101 227 2.77e-14 77.4
MS.gene05308.t1 AT3G09370 39.161 143 85 2 485 625 94 236 2.15e-23 105
MS.gene05308.t1 AT3G09370 36.667 150 93 2 430 578 92 240 1.77e-21 100
MS.gene05308.t1 AT3G09370 44.000 100 52 3 530 625 86 185 1.62e-15 81.3
MS.gene05308.t1 AT3G09370 34.615 130 82 3 399 528 114 240 4.27e-14 77.0
MS.gene05308.t1 AT4G32730 34.000 150 97 2 430 578 36 184 9.79e-22 102
MS.gene05308.t1 AT4G32730 31.522 184 114 3 484 665 37 210 3.50e-21 100
MS.gene05308.t1 AT4G32730 31.298 131 87 3 398 528 57 184 3.57e-14 77.8
MS.gene05308.t1 AT4G32730 41.053 95 54 2 533 625 35 129 4.62e-12 70.9
MS.gene05308.t1 AT4G32730 34.000 150 97 2 430 578 36 184 1.47e-21 102
MS.gene05308.t1 AT4G32730 31.522 184 114 3 484 665 37 210 3.57e-21 100
MS.gene05308.t1 AT4G32730 31.298 131 87 3 398 528 57 184 3.46e-14 77.8
MS.gene05308.t1 AT4G32730 41.053 95 54 2 533 625 35 129 4.26e-12 71.2
MS.gene05308.t1 AT4G32730 34.000 150 97 2 430 578 36 184 1.47e-21 102
MS.gene05308.t1 AT4G32730 31.522 184 114 3 484 665 37 210 3.57e-21 100
MS.gene05308.t1 AT4G32730 31.298 131 87 3 398 528 57 184 3.46e-14 77.8
MS.gene05308.t1 AT4G32730 41.053 95 54 2 533 625 35 129 4.26e-12 71.2
MS.gene05308.t1 AT4G32730 34.000 150 97 2 430 578 36 184 1.47e-21 102
MS.gene05308.t1 AT4G32730 31.522 184 114 3 484 665 37 210 3.57e-21 100
MS.gene05308.t1 AT4G32730 31.298 131 87 3 398 528 57 184 3.46e-14 77.8
MS.gene05308.t1 AT4G32730 41.053 95 54 2 533 625 35 129 4.26e-12 71.2
MS.gene05308.t1 AT4G32730 34.000 150 97 2 430 578 36 184 1.47e-21 102
MS.gene05308.t1 AT4G32730 31.522 184 114 3 484 665 37 210 3.57e-21 100
MS.gene05308.t1 AT4G32730 31.298 131 87 3 398 528 57 184 3.46e-14 77.8
MS.gene05308.t1 AT4G32730 41.053 95 54 2 533 625 35 129 4.26e-12 71.2
MS.gene05308.t1 AT4G00540 35.099 151 88 3 485 625 49 199 4.87e-18 88.2
MS.gene05308.t1 AT4G00540 33.987 153 93 3 430 574 47 199 1.20e-15 80.9
MS.gene05308.t1 AT4G00540 34.266 143 82 5 398 533 68 205 5.26e-11 66.6
MS.gene05308.t1 AT4G00540 35.099 151 88 3 485 625 47 197 7.11e-18 88.2
MS.gene05308.t1 AT4G00540 33.987 153 93 3 430 574 45 197 2.07e-15 80.5
MS.gene05308.t1 AT4G00540 34.266 143 82 5 398 533 66 203 8.59e-11 65.9
MS.gene05308.t1 AT3G27785 40.625 96 56 1 531 625 187 282 7.98e-14 75.5
MS.gene05308.t1 AT3G27785 35.052 97 62 1 479 574 186 282 3.64e-11 67.0
MS.gene05308.t1 AT1G69560 34.021 97 63 1 479 574 104 200 7.87e-13 71.2
MS.gene05308.t1 AT1G69560 27.451 153 101 3 477 628 60 203 6.95e-11 65.5
MS.gene05308.t1 AT1G69560 34.021 97 63 1 479 574 120 216 1.02e-12 71.2
MS.gene05308.t1 AT1G69560 27.451 153 101 3 477 628 76 219 9.55e-11 65.1
MS.gene05308.t1 AT5G11050 36.458 96 60 1 531 625 103 198 1.15e-12 71.6
MS.gene05308.t1 AT5G11050 32.990 97 64 1 479 574 102 198 1.27e-11 68.6
MS.gene05308.t1 AT5G58850 34.021 97 63 1 479 574 102 198 1.77e-12 71.2
MS.gene05308.t1 AT5G58850 34.314 102 66 1 525 625 97 198 7.81e-11 66.2
MS.gene05308.t1 AT5G67300 36.170 94 59 1 533 625 6 99 1.78e-12 70.1
MS.gene05308.t1 AT1G26780 33.333 93 61 1 483 574 99 191 3.47e-12 69.7
MS.gene05308.t1 AT5G39700 34.409 93 60 1 483 574 57 149 3.92e-12 66.6
MS.gene05308.t1 AT4G18770 38.298 94 57 1 533 625 217 310 5.11e-12 69.7
MS.gene05308.t1 AT1G26780 34.066 91 59 1 485 574 101 191 5.64e-12 68.2
MS.gene05308.t1 AT5G17800 34.783 92 59 1 484 574 95 186 1.06e-11 67.8
MS.gene05308.t1 AT5G17800 35.052 97 62 1 533 628 93 189 3.45e-11 66.2
MS.gene05308.t1 AT1G17950 32.258 93 62 1 483 574 6 98 1.18e-11 66.6
MS.gene05308.t1 AT1G17950 36.082 97 61 1 533 628 5 101 2.84e-11 65.5
MS.gene05308.t1 AT1G14350 28.030 132 94 1 485 615 28 159 1.96e-11 68.2
MS.gene05308.t1 AT1G14350 28.030 132 94 1 485 615 28 159 1.96e-11 68.2
MS.gene05308.t1 AT3G29020 35.165 91 58 1 485 574 68 158 2.51e-11 65.5
MS.gene05308.t1 AT2G39880 38.298 94 57 1 533 625 50 143 2.92e-11 67.0
MS.gene05308.t1 AT3G50060 32.323 99 66 1 481 578 5 103 3.22e-11 66.2
MS.gene05308.t1 AT3G29020 34.783 92 59 1 484 574 69 160 4.24e-11 65.9
MS.gene05308.t1 AT5G14750 35.644 101 61 3 485 582 21 120 5.82e-11 63.5
MS.gene05308.t1 AT4G33450 33.673 98 64 1 478 574 15 112 5.96e-11 64.7
MS.gene05308.t1 AT1G09770 36.458 96 59 2 485 579 10 104 9.48e-11 66.6

Find 238 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTTCCAAATTGAAAA+TGG 0.103105 6.3:-74447530 MS.gene05308:CDS
TTGCAGATGCTTTCTTATTA+TGG 0.166772 6.3:+74454943 None:intergenic
ACTTACTTCTAAGAAATTTC+TGG 0.179080 6.3:+74455701 None:intergenic
ATCTAAAAGACGTGCTAAAA+AGG 0.216264 6.3:-74448010 MS.gene05308:CDS
AAATTTGAAGCAACGTTTCT+TGG 0.229500 6.3:+74454784 None:intergenic
GATACGGCCAGGAACATATT+TGG 0.252269 6.3:+74449064 None:intergenic
AACCTTATTGAATCAGTTAA+AGG 0.271720 6.3:-74451413 MS.gene05308:CDS
TACCTTTAACTGATTCAATA+AGG 0.272389 6.3:+74451411 None:intergenic
AGACCAGCAACATCCATATT+TGG 0.276579 6.3:+74448858 None:intergenic
AATCGATCCCAATTAACTTT+AGG 0.296877 6.3:+74451353 None:intergenic
GAAGCTGCAATCACCAAATA+TGG 0.298716 6.3:-74448871 MS.gene05308:CDS
TTCTCGATCGACAAAGTTCC+TGG 0.302389 6.3:+74448612 None:intergenic
TCTTGTTCCTCAGGACAAAA+TGG 0.308882 6.3:+74448189 None:intergenic
TGGCAGATACCTTAATAGTT+TGG 0.316146 6.3:-74448944 MS.gene05308:intron
CGTGATGCTGTTGCATGCTT+TGG 0.317885 6.3:-74450172 MS.gene05308:CDS
TTGTCTCTTACATGTGTTAC+TGG 0.325805 6.3:-74447748 MS.gene05308:CDS
AAGAAGGGTCCAAACTATTA+AGG 0.329261 6.3:+74448935 None:intergenic
AATCCGTCTTGCTCATTAGA+TGG 0.331360 6.3:+74447769 None:intergenic
TTCAACTTGCTGTCATTCTC+AGG 0.333946 6.3:+74455859 None:intergenic
CATGCTTTGGTGAGTGTGAT+TGG 0.337147 6.3:-74450159 MS.gene05308:CDS
GCAACAACTTTATTTCCTAA+TGG 0.345344 6.3:+74447240 None:intergenic
GGATCAGGCCTCGAGTTTAA+TGG 0.348097 6.3:-74455956 MS.gene05308:CDS
CACTAGAATCAACTTCTGTT+TGG 0.349026 6.3:+74447704 None:intergenic
GTTTGGACCCTTCTTTGAAA+TGG 0.349718 6.3:-74448927 MS.gene05308:CDS
GGACAATGTTAAACTCCTTA+AGG 0.355715 6.3:-74455635 MS.gene05308:CDS
AGCAAAGGTCTCAGCTTTCC+AGG 0.357183 6.3:-74448630 MS.gene05308:CDS
TTCTCAGGGTCTTGAGAATC+AGG 0.359272 6.3:+74455874 None:intergenic
TCAATGACATTTATGTTTGT+CGG 0.361986 6.3:+74447391 None:intergenic
TAAACTCCTTAAGGATTTCC+AGG 0.364402 6.3:-74455626 MS.gene05308:CDS
TTCTTCCACGTTGATGTTTG+TGG 0.380173 6.3:+74447327 None:intergenic
TGGAAAGGAAGCATGGGCAG+AGG 0.382172 6.3:-74455980 MS.gene05308:CDS
TTGTCCAAGAGAAGGGTATC+AGG 0.390155 6.3:-74450324 MS.gene05308:CDS
ACTGTAGCGGTCATGCTGTT+TGG 0.394003 6.3:-74449107 MS.gene05308:CDS
CAGGCTTCCATTTCAATGCT+TGG 0.397187 6.3:-74450266 MS.gene05308:CDS
TCTTCCACGTTGATGTTTGT+GGG 0.397828 6.3:+74447328 None:intergenic
TGGCAATGATAAGCCTCTTC+AGG 0.402096 6.3:-74447611 MS.gene05308:CDS
ATGACATCACACTTGCTTGC+TGG 0.403451 6.3:-74447897 MS.gene05308:CDS
ACTTTCTCTTCCGCTTCCTT+CGG 0.404274 6.3:+74448506 None:intergenic
GTAAGGCGTTCGTCCTCCTC+AGG 0.404385 6.3:+74449128 None:intergenic
ATCGGAGGAGGTGGCGGTGG+AGG 0.409764 6.3:+74458052 None:intergenic
CACAGTTCAGAGTGTTTACC+TGG 0.412332 6.3:-74451455 MS.gene05308:intron
CAAATAACCAAATATGTTCC+TGG 0.414406 6.3:-74449071 MS.gene05308:CDS
GTTTGACATTGCTGTATCAT+TGG 0.415041 6.3:-74450296 MS.gene05308:CDS
TGAGAAGGAAAACAAAGAAA+TGG 0.416166 6.3:-74447582 MS.gene05308:CDS
GCAACACGAGAATTCTCATC+TGG 0.420913 6.3:+74454909 None:intergenic
AAAGCATCTGCAATGTGTTA+TGG 0.421920 6.3:-74454933 MS.gene05308:CDS
ATATGGATGTTGCTGGTCTA+AGG 0.424272 6.3:-74448854 MS.gene05308:CDS
TCTCCTTCCAAATTGAAAAT+GGG 0.427041 6.3:-74447529 MS.gene05308:CDS
CTTCTTTGAAATGGAGTGAA+TGG 0.428476 6.3:-74448918 MS.gene05308:CDS
GGAACTTTATCTTGTTCCTC+AGG 0.432258 6.3:+74448180 None:intergenic
ACCTGTCCCTACACTGAGAT+TGG 0.432516 6.3:+74449042 None:intergenic
GGTGCCGATGATAGCTGCTT+CGG 0.433784 6.3:-74457793 MS.gene05308:CDS
TCCTAGAGAAAGACGAAGTC+TGG 0.436288 6.3:+74447827 None:intergenic
TTCATATTATGTGCATCCTC+TGG 0.436433 6.3:+74447640 None:intergenic
ACCTTTGATTTATTTGATGC+AGG 0.437772 6.3:+74455523 None:intergenic
TTAAGCAGAAGAGCTTGTTC+AGG 0.440920 6.3:+74448667 None:intergenic
TCACCAAATATGGATGTTGC+TGG 0.441147 6.3:-74448861 MS.gene05308:CDS
CTGTATCATTGGCCACAAAC+AGG 0.441542 6.3:-74450285 MS.gene05308:CDS
TGGTGGTTGCCTTGTTTCCA+TGG 0.442966 6.3:+74447494 None:intergenic
ATGAAACCTGGAAATCCTTA+AGG 0.447834 6.3:+74455620 None:intergenic
TCCATGTCATTTGCATCTCC+AGG 0.450089 6.3:+74451437 None:intergenic
CATTCACTCCATTTCAAAGA+AGG 0.450882 6.3:+74448919 None:intergenic
TAAAGTTAATTGGGATCGAT+TGG 0.454166 6.3:-74451351 MS.gene05308:CDS
TTCAATTTCGTCTTCATCGG+CGG 0.455242 6.3:+74457971 None:intergenic
TTCTTCAATTTCGTCTTCAT+CGG 0.459661 6.3:+74457968 None:intergenic
AATCGTGCCAAGCATTGAAA+TGG 0.463782 6.3:+74450259 None:intergenic
GCTATAAATTGTACTTCCTC+AGG 0.467128 6.3:+74448111 None:intergenic
CAATTTGTCCTGTGAGGAAA+GGG 0.467162 6.3:-74449160 MS.gene05308:CDS
AGTTCCTGATACCCTTCTCT+TGG 0.467311 6.3:+74450320 None:intergenic
GACCGCATCAATAAAAGCTT+GGG 0.469114 6.3:+74455741 None:intergenic
TGACTTAATTCCTTCACAAA+TGG 0.469153 6.3:-74448563 MS.gene05308:CDS
CGGTGGCAGTGGTAGTGAAA+GGG 0.469281 6.3:+74457907 None:intergenic
GTCATCGGAGGAGGTGGCGG+TGG 0.469668 6.3:+74458049 None:intergenic
CTTCTCAATTACCGAAGAAA+AGG 0.474981 6.3:-74455783 MS.gene05308:CDS
ATCCTCATTGGCGGTGGCAG+TGG 0.475628 6.3:+74457896 None:intergenic
GAAGGAATTAAGTCATTCAC+TGG 0.476334 6.3:+74448571 None:intergenic
TGACCGCATCAATAAAAGCT+TGG 0.479293 6.3:+74455740 None:intergenic
TGCTAACTATAAGATGGTAT+TGG 0.482158 6.3:-74454889 MS.gene05308:CDS
AGGAGGTGGCGGTGGAGGAA+TGG 0.486383 6.3:+74458057 None:intergenic
GGGGAATTCTGTTCCTTCGC+CGG 0.486482 6.3:-74457814 MS.gene05308:CDS
GTGCCGATGATAGCTGCTTC+GGG 0.486538 6.3:-74457792 MS.gene05308:CDS
AAGAGAAGGGTATCAGGAAC+TGG 0.487054 6.3:-74450318 MS.gene05308:CDS
AGACATTCTAGATCATCATC+GGG 0.487140 6.3:+74457867 None:intergenic
GGAAAGGAAGCATGGGCAGA+GGG 0.488737 6.3:-74455979 MS.gene05308:CDS
ATGGGCCATGGTTGATCAAA+GGG 0.489303 6.3:+74450380 None:intergenic
TCGTCGGTGCGTGGTGACAT+TGG 0.489832 6.3:+74458101 None:intergenic
ACTTTCCGAACTCTTGCTAC+AGG 0.490694 6.3:+74447930 None:intergenic
TTCGTCCTCCTCAGGGGTAA+AGG 0.491814 6.3:+74449136 None:intergenic
ATGTATGCCACTGGCCGTAC+TGG 0.492414 6.3:-74451323 MS.gene05308:CDS
GAGACCATCGTCGTCGTCAT+CGG 0.492841 6.3:+74458034 None:intergenic
CGGGAACCCAGTGCTCGAAT+AGG 0.493876 6.3:-74450105 MS.gene05308:intron
TGGTTCTCTGCCATCAGAAA+TGG 0.496137 6.3:+74447474 None:intergenic
GCGGTGGCAGTGGTAGTGAA+AGG 0.496218 6.3:+74457906 None:intergenic
CTTCGATTATAAATAGTGAA+TGG 0.496259 6.3:-74450219 MS.gene05308:CDS
CTTCAGAAGTCCATGGGCCA+TGG 0.498659 6.3:+74450368 None:intergenic
ATCCGTCTTGCTCATTAGAT+GGG 0.504207 6.3:+74447770 None:intergenic
TTTGATTATTGTCCAAGAGA+AGG 0.507766 6.3:-74450332 MS.gene05308:CDS
GTCGTCATCGGAGGAGGTGG+CGG 0.508428 6.3:+74458046 None:intergenic
TTATAAATAGTGAATGGACT+GGG 0.510551 6.3:-74450213 MS.gene05308:CDS
CTTCTCACATAGACCTGAAG+AGG 0.511308 6.3:+74447598 None:intergenic
ATCTCTGACAACTCAGATGC+CGG 0.515219 6.3:-74455907 MS.gene05308:CDS
TCAATAAAAGCTTGGGCCGA+TGG 0.518217 6.3:+74455748 None:intergenic
AAGTCATTCACTGGAAGGAC+GGG 0.518743 6.3:+74448580 None:intergenic
GAACCAACCTATTCGAGCAC+TGG 0.520039 6.3:+74450098 None:intergenic
CAAGACCTGTAGCAAGAGTT+CGG 0.520718 6.3:-74447935 MS.gene05308:CDS
TCTGCATCTTGTACTTCCTC+AGG 0.521598 6.3:+74448255 None:intergenic
AAGGTCAAGCTTTCCTCCAT+CGG 0.523147 6.3:-74455764 MS.gene05308:CDS
TCATGCTGTTTGGACGGAAG+TGG 0.524259 6.3:-74449097 MS.gene05308:CDS
TTGATTATTGTCCAAGAGAA+GGG 0.525222 6.3:-74450331 MS.gene05308:CDS
TCAATTTGTCCTGTGAGGAA+AGG 0.527537 6.3:-74449161 MS.gene05308:CDS
GTCGTCGTCATCGGAGGAGG+TGG 0.528578 6.3:+74458043 None:intergenic
GTAAAGGTCCCTTTCCTCAC+AGG 0.529986 6.3:+74449152 None:intergenic
ATCGTCGTCGTCATCGGAGG+AGG 0.530850 6.3:+74458040 None:intergenic
CCGGCATTGACAATCAGTGC+GGG 0.533494 6.3:+74448813 None:intergenic
TCAACTTGCTGTCATTCTCA+GGG 0.533513 6.3:+74455860 None:intergenic
ATTATAAATAGTGAATGGAC+TGG 0.534017 6.3:-74450214 MS.gene05308:CDS
GTCAGAATCCTCATTGGCGG+TGG 0.534768 6.3:+74457890 None:intergenic
CTGAAAATCTCCGAAGGAAG+CGG 0.534939 6.3:-74448516 MS.gene05308:CDS
AATGCTTGGCACGATTTCAA+AGG 0.535163 6.3:-74450252 MS.gene05308:CDS
GGTGGCGGTGGAGGAATGGT+CGG 0.535673 6.3:+74458061 None:intergenic
GCTATCATCGGCACCGGCGA+AGG 0.536407 6.3:+74457801 None:intergenic
CAGAGTCTCTACAAACCTAC+GGG 0.536494 6.3:-74457834 MS.gene05308:CDS
GTTATCTTGTTCGTAATCGT+CGG 0.536606 6.3:+74458085 None:intergenic
GCCAGACTTCGTCTTTCTCT+AGG 0.536737 6.3:-74447828 MS.gene05308:CDS
ACATCGCTTTGCTCAGACAA+TGG 0.537325 6.3:+74448048 None:intergenic
CACTGAGATTGGATACGGCC+AGG 0.538017 6.3:+74449053 None:intergenic
GAGGATGCACATAATATGAA+TGG 0.539563 6.3:-74447637 MS.gene05308:CDS
CATGGGCCATGGTTGATCAA+AGG 0.541123 6.3:+74450379 None:intergenic
CATTCACTATTTATAATCGA+AGG 0.542434 6.3:+74450220 None:intergenic
GAAAGGGGCAATAGCGTCAC+CGG 0.543325 6.3:+74457923 None:intergenic
AAAATTGTATCTAAGCAGGT+TGG 0.543436 6.3:-74447802 MS.gene05308:CDS
CCCTACACTGAGATTGGATA+CGG 0.544793 6.3:+74449048 None:intergenic
TCGTGTTGCTAACTATAAGA+TGG 0.545643 6.3:-74454895 MS.gene05308:CDS
CCCGCACTGATTGTCAATGC+CGG 0.546948 6.3:-74448813 MS.gene05308:CDS
GGCATCTGAGTTGTCAGAGA+TGG 0.548434 6.3:+74455909 None:intergenic
TCCAATCTCAGTGTAGGGAC+AGG 0.550474 6.3:-74449043 MS.gene05308:intron
CAGACATTCTAGATCATCAT+CGG 0.551437 6.3:+74457866 None:intergenic
AAATTTCAGTAGATAGAATG+AGG 0.552434 6.3:-74454767 MS.gene05308:intron
ACAGCATGACCGCTACAGTA+AGG 0.553023 6.3:+74449111 None:intergenic
ATCGGGGTCAGAATCCTCAT+TGG 0.556340 6.3:+74457884 None:intergenic
TAAGTCATTCACTGGAAGGA+CGG 0.556782 6.3:+74448579 None:intergenic
TTATCCTCTTCAGAAGTCCA+TGG 0.556985 6.3:+74450361 None:intergenic
CTTTGATCAACCATGGCCCA+TGG 0.557051 6.3:-74450378 MS.gene05308:CDS
GCCGTATCCAATCTCAGTGT+AGG 0.557965 6.3:-74449049 MS.gene05308:CDS
TAAGGCGTTCGTCCTCCTCA+GGG 0.560504 6.3:+74449129 None:intergenic
TTGAAATGGAAGCCTGTTTG+TGG 0.562015 6.3:+74450273 None:intergenic
CCGTATCCAATCTCAGTGTA+GGG 0.562137 6.3:-74449048 MS.gene05308:CDS
TTGAAGGTGGAAAGGAAGCA+TGG 0.562281 6.3:-74455987 MS.gene05308:intron
AAAGGGTCGAATTCATCTCA+AGG 0.563869 6.3:-74447992 MS.gene05308:CDS
ATTCACTCCATTTCAAAGAA+GGG 0.563989 6.3:+74448920 None:intergenic
GAAAGGAAGCATGGGCAGAG+GGG 0.564022 6.3:-74455978 MS.gene05308:CDS
AAAGGAAGCATGGGCAGAGG+GGG 0.565557 6.3:-74455977 MS.gene05308:CDS
AAACATAAATGTCATTGAAG+AGG 0.566314 6.3:-74447386 MS.gene05308:CDS
TGTTCGTAATCGTCGGTGCG+TGG 0.566671 6.3:+74458092 None:intergenic
TTGGCTTCTATGTATGCCAC+TGG 0.566806 6.3:-74451332 MS.gene05308:CDS
CTCTTCAGGTCTATGTGAGA+AGG 0.567546 6.3:-74447597 MS.gene05308:CDS
AAAATGGTCGGATAAGGAAA+GGG 0.570382 6.3:-74454838 MS.gene05308:CDS
ATTTGGAAGGAGAGCAAGCA+CGG 0.571481 6.3:+74447539 None:intergenic
TCAGAGTCTCTACAAACCTA+CGG 0.573622 6.3:-74457835 MS.gene05308:CDS
GGGGTCAGAATCCTCATTGG+CGG 0.573729 6.3:+74457887 None:intergenic
GGTGGCAGTGGTAGTGAAAG+GGG 0.573973 6.3:+74457908 None:intergenic
CTTGCAGTCACCAGAAAGAG+AGG 0.580959 6.3:-74448311 MS.gene05308:intron
ACGTATTTAGAACGGCGGAC+GGG 0.581277 6.3:-74450124 MS.gene05308:CDS
TCCTGCATCAAATAAATCAA+AGG 0.581623 6.3:-74455524 MS.gene05308:intron
ATGGGATCGATGTCACTCCA+TGG 0.581696 6.3:-74447511 MS.gene05308:CDS
GAAGCAGCTATCATCGGCAC+CGG 0.582330 6.3:+74457795 None:intergenic
AACCAACCTATTCGAGCACT+GGG 0.582462 6.3:+74450099 None:intergenic
CGATGGTCTCAAAGATGACA+TGG 0.584029 6.3:-74458021 MS.gene05308:CDS
GAAAGGGAGAATCTTTCGAA+GGG 0.584840 6.3:-74454822 MS.gene05308:CDS
TATCCTCTTCAGAAGTCCAT+GGG 0.585905 6.3:+74450362 None:intergenic
TTTGCAAGGTGGAAAGAGGA+AGG 0.587368 6.3:+74447293 None:intergenic
GGAAAGGGAGAATCTTTCGA+AGG 0.587689 6.3:-74454823 MS.gene05308:CDS
TACGTATTTAGAACGGCGGA+CGG 0.587695 6.3:-74450125 MS.gene05308:CDS
TGGTTCCCTTGAAGGTGGAA+AGG 0.589368 6.3:-74455995 MS.gene05308:intron
ATTCACATTCAGCACCAGTA+CGG 0.592033 6.3:+74451309 None:intergenic
TTCATTGGTCAGGAGATGGA+TGG 0.593162 6.3:-74448698 MS.gene05308:intron
TGAAGGTGGAAAGGAAGCAT+GGG 0.594158 6.3:-74455986 MS.gene05308:intron
GAGTGAATGGACTAAAGAAG+AGG 0.598139 6.3:-74448905 MS.gene05308:CDS
GCACATAATATGAATGGTGA+TGG 0.601762 6.3:-74447631 MS.gene05308:CDS
AAGAGTTCGGAAAGTCAAGA+TGG 0.602465 6.3:-74447922 MS.gene05308:CDS
TCACCCGAAGCAGCTATCAT+CGG 0.608781 6.3:+74457789 None:intergenic
AGAATCAGGACACAATTCAC+CGG 0.611779 6.3:+74455888 None:intergenic
ATGCAGATCCCAAGAAAGAG+AGG 0.612274 6.3:-74448239 MS.gene05308:CDS
TCTCTTACATGTGTTACTGG+TGG 0.612638 6.3:-74447745 MS.gene05308:CDS
TAGCGGTCATGCTGTTTGGA+CGG 0.613913 6.3:-74449103 MS.gene05308:CDS
TGGCCCATGGACTTCTGAAG+AGG 0.614566 6.3:-74450365 MS.gene05308:CDS
ATAAAAGCTTGGGCCGATGG+AGG 0.615824 6.3:+74455751 None:intergenic
CAAGTCTCATCAGCACCACA+TGG 0.617617 6.3:+74455826 None:intergenic
ACCATCGTCGTCGTCATCGG+AGG 0.622403 6.3:+74458037 None:intergenic
GATGTCACTCCATGGAAACA+AGG 0.623083 6.3:-74447503 MS.gene05308:CDS
GGTGGAACTACCATTTGTGA+AGG 0.623695 6.3:+74448553 None:intergenic
AAGGCAACCACCATTTCTGA+TGG 0.624361 6.3:-74447484 MS.gene05308:CDS
TACCACTGCCACCGCCAATG+AGG 0.624732 6.3:-74457898 MS.gene05308:CDS
CTGGTGCTGAATGTGAATCA+AGG 0.629877 6.3:-74451304 MS.gene05308:intron
GAATTAAGTCATTCACTGGA+AGG 0.629989 6.3:+74448575 None:intergenic
GAATATAGCATTTAGTGACA+AGG 0.631425 6.3:-74447959 MS.gene05308:CDS
ACCTGGAGATGCAAATGACA+TGG 0.634244 6.3:-74451438 MS.gene05308:CDS
CAACACGAGAATTCTCATCT+GGG 0.635223 6.3:+74454910 None:intergenic
TTGCTCATCCATTAAACTCG+AGG 0.636750 6.3:+74455948 None:intergenic
ATCCCATCTAATGAGCAAGA+CGG 0.639074 6.3:-74447772 MS.gene05308:CDS
GAAGACCCTTTGATCAACCA+TGG 0.645219 6.3:-74450385 MS.gene05308:CDS
AGGGGCAATAGCGTCACCGG+TGG 0.652845 6.3:+74457926 None:intergenic
CATGTCAAAAGTTGTCGTAG+AGG 0.652890 6.3:-74447449 MS.gene05308:CDS
AAAGGCTCGGATTTGTCCTG+AGG 0.653431 6.3:-74448127 MS.gene05308:CDS
TTCTCTGCCATCAGAAATGG+TGG 0.654284 6.3:+74447477 None:intergenic
TCAGCACCAACATCAGATGG+TGG 0.655822 6.3:+74448535 None:intergenic
GATGATATTAACTGCACACG+CGG 0.657130 6.3:+74455556 None:intergenic
TTCAGCACCAGTACGGCCAG+TGG 0.657884 6.3:+74451316 None:intergenic
GTAGTTCCACCATCTGATGT+TGG 0.658029 6.3:-74448541 MS.gene05308:CDS
GGACGAACGCCTTACTGTAG+CGG 0.658493 6.3:-74449120 MS.gene05308:CDS
CTGTAGCTACGTATTTAGAA+CGG 0.659399 6.3:-74450132 MS.gene05308:CDS
AAATGGAGTCAAGATACTGA+AGG 0.660891 6.3:-74447565 MS.gene05308:CDS
TTGGTGCTGAAAATCTCCGA+AGG 0.661899 6.3:-74448522 MS.gene05308:CDS
AGGGACCTTTACCCCTGAGG+AGG 0.664445 6.3:-74449141 MS.gene05308:CDS
TGCTTCGGGTGATGATGATG+AGG 0.664761 6.3:-74457778 MS.gene05308:CDS
CGGCATTGACAATCAGTGCG+GGG 0.666902 6.3:+74448814 None:intergenic
GGAAGCGGAAGAGAAAGTCA+AGG 0.666992 6.3:-74448501 MS.gene05308:intron
GAAGGAACAGAATTCCCCGT+AGG 0.671408 6.3:+74457819 None:intergenic
GCGTCACCGGTGGATAAAAG+CGG 0.676532 6.3:+74457936 None:intergenic
TCCGGCATTGACAATCAGTG+CGG 0.678171 6.3:+74448812 None:intergenic
TCCTCCGATGACGACGACGA+TGG 0.678470 6.3:-74458038 MS.gene05308:CDS
AAGATGAAGACTTCTGATCG+AGG 0.680787 6.3:-74448075 MS.gene05308:CDS
TTGTCGATCGAGAATCTGAA+CGG 0.683321 6.3:-74448603 MS.gene05308:CDS
TATAAATAGTGAATGGACTG+GGG 0.683823 6.3:-74450212 MS.gene05308:CDS
AAATGCAGCTAGAAAACCAG+AGG 0.695473 6.3:-74447656 MS.gene05308:CDS
AAGGCGTTCGTCCTCCTCAG+GGG 0.696660 6.3:+74449130 None:intergenic
AGAGACTGGACTTTGTCCTG+AGG 0.697235 6.3:-74448271 MS.gene05308:CDS
ATGATATTAACTGCACACGC+GGG 0.699180 6.3:+74455557 None:intergenic
GAACAAGTGAGAAAACCAGA+AGG 0.701210 6.3:-74447682 MS.gene05308:CDS
TTGAAATTGATTAAGCCATG+TGG 0.707688 6.3:-74455841 MS.gene05308:CDS
GAAGAGGAGACTGATCTGCA+TGG 0.715634 6.3:-74447370 MS.gene05308:CDS
TAGCTACGTATTTAGAACGG+CGG 0.743423 6.3:-74450129 MS.gene05308:CDS
GAAAGGGACCTTTACCCCTG+AGG 0.748237 6.3:-74449144 MS.gene05308:CDS
GACATTCTAGATCATCATCG+GGG 0.751887 6.3:+74457868 None:intergenic
GTATTGAAATCACACCAGAG+AGG 0.774639 6.3:-74451391 MS.gene05308:CDS
GAGGAGACTGATCTGCATGG+TGG 0.779129 6.3:-74447367 MS.gene05308:CDS
TGAACCCACAAACATCAACG+TGG 0.813346 6.3:-74447332 MS.gene05308:CDS
AGAGTCTCTACAAACCTACG+GGG 0.839118 6.3:-74457833 MS.gene05308:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.3 gene 74447249 74458120 74447249 ID=MS.gene05308
chr6.3 mRNA 74447249 74458120 74447249 ID=MS.gene05308.t1;Parent=MS.gene05308
chr6.3 exon 74457715 74458120 74457715 ID=MS.gene05308.t1.exon1;Parent=MS.gene05308.t1
chr6.3 CDS 74457715 74458120 74457715 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74455525 74456003 74455525 ID=MS.gene05308.t1.exon2;Parent=MS.gene05308.t1
chr6.3 CDS 74455525 74456003 74455525 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74454768 74454967 74454768 ID=MS.gene05308.t1.exon3;Parent=MS.gene05308.t1
chr6.3 CDS 74454768 74454967 74454768 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74451305 74451472 74451305 ID=MS.gene05308.t1.exon4;Parent=MS.gene05308.t1
chr6.3 CDS 74451305 74451472 74451305 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74450106 74450420 74450106 ID=MS.gene05308.t1.exon5;Parent=MS.gene05308.t1
chr6.3 CDS 74450106 74450420 74450106 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74449044 74449193 74449044 ID=MS.gene05308.t1.exon6;Parent=MS.gene05308.t1
chr6.3 CDS 74449044 74449193 74449044 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74448811 74448960 74448811 ID=MS.gene05308.t1.exon7;Parent=MS.gene05308.t1
chr6.3 CDS 74448811 74448960 74448811 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74448502 74448708 74448502 ID=MS.gene05308.t1.exon8;Parent=MS.gene05308.t1
chr6.3 CDS 74448502 74448708 74448502 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
chr6.3 exon 74447249 74448326 74447249 ID=MS.gene05308.t1.exon9;Parent=MS.gene05308.t1
chr6.3 CDS 74447249 74448326 74447249 ID=cds.MS.gene05308.t1;Parent=MS.gene05308.t1
Gene Sequence

>MS.gene05308

ATGTCACCACGCACCGACGATTACGAACAAGATAACACCGACCATTCCTCCACCGCCACCTCCTCCGATGACGACGACGATGGTCTCAAAGATGACATGGCAGCTCTCGCACGCGCTTGTAGATTCACCGCCGATGAAGACGAAATTGAAGAAGTAGAAGATCCGCTTTTATCCACCGGTGACGCTATTGCCCCTTTCACTACCACTGCCACCGCCAATGAGGATTCTGACCCCGATGATGATCTAGAATGTCTGAAGAGAGTTCAGAGTCTCTACAAACCTACGGGGAATTCTGTTCCTTCGCCGGTGCCGATGATAGCTGCTTCGGGTGATGATGATGAGGATGATGAAGATGATTTTGAAACTGTTCGTGCTATTTTTAAACGGTTTTCTGCTTATGATGGAGGTAGGTTAAGTAATTTTTGTTATATAATTTTGAATTTTTCTTTGAAATTTGAAAATTTGGTTGTGAATTTGTTTGTTTTGGTTAGGGTTAATGTGTTTTGAAGAAAAAAGATGCAGCTTGTGGGTTAAGTAATCTTTGAAATTTTTAATTTTTTAGCTAATTTGTTTGTTTTGGTTATGGTTAATGTGTTTTGAAGATAAAAGATGCAGCTTGTGGGTTAAGTAATCTATGAAATTTTGATTTTTTAGTTAATTTGTTTGTTTTGGATTAGGGTTAATGCATAGGAAAAAACAATGTAGCTTAAGTAATCTTTGAAAAACTGCATTTTTGTTATTGTTTATGTGTGTGGTGATTGGAGCTGAACATTGTTTGATTTTGGTTTTCTGTTTATTAATGCATTTTCGGCAAGTATATATAATTTGAGCTGGGTATGTGAAAAAAGCTATATTTTTTAAACATAGGGTCTGTTTGTTTGCTACCGAACACTAAAAAAGGGATTTTGATACTCAAAAATTTAGAGATTAATTTTAAAAAAATTCAGAAGCTGTTTTCAAATGGTTTTCTGCTTATGATGGAGGTAGGTTAAGTAATCTTTGTTATAAAATTCGGAATTTTTCTTTGAAATTTGAAATTTTGGTTTGTTAATTTGTTTGTATTGGTTAGGATTAATGCGTTTTGAAGAAAAAAGAAGCAGCTTGTGGGTTAAGTAATATATGAAATATTGATTTTTTTAGCTAATTTGTTTGTTTTGGTTAGGGTTAATGCGTTTTGAAGAAAAAAGATGCAGCTTGTGGGTTAAGTAAACTTTGAAATTTTAAATTTTTCAGTTAATTGGTTTGTTTTGGTTTAGGGTTAATGCATACTGAAGGAAAAAACAATGTAGCTTAAGTAATCTTTGAAAATAATTTGGTTTAGTTAATTGGTTTGTTTTTGTTTGTGGTGATTGGAGCTGAACATTGTTTGATATTGGTTTTCTGTTAATTAACGTGTTTTCGGCAAGTATATTTGAGCTGGGTATGTAAAAAAAAGCTATCTTTTTGAAACATAGGATTATAAATAAAAGTTTTTTTGATACTCAATCATTTAGAGATTAATTTTTTTAAAAATCAGAAGCTGTTTAGTGTTTGTTTATCAGAATGTGTATAACTTTTTAACTAAAAAATCAGTTACAAAAAAATGATTTTCCTGATAAGATACTAAAAATAGCTTCTCATTTGAAGTAGTATTTATATATATTTTTCTTTCAGATTCTCATTTTTTTGAAAATATGTAAGAAACTGATGAAAATTATAGAAGTGGTTTTTTAATGAAAAAAGCTGTAAGAAACGGGATCATAATATATATATATATATATATAGTTTTTTCATGTGTGTGGTAATTGAAGCTTAATATTGTTTCGTTTTGGTTTTCTGTTAATGCTTGCGTTTTGGGCTAGTATATTTGAGTTGTGCAAGTAAAAGAAGAGGTTATCTTTTTGAAAGGAATAAAAAAACAAAACAATATGTAGTTTTTGATGCACGAGTGATTGACATGAATAGCAAGAGTCCATATTTATGGAGCTTGATAATGGTTTTCTCAAAAATGTCTTTTTGATGTCATTTTTTGCGCCCATTTACCACTGATTATGTCCTTTGTCACTTTTATATCACTTGGATTTTTTATTTTTGATAAAAAAACTTGGCATAGTGACAAATATCTGGTTCCCTTGAAGGTGGAAAGGAAGCATGGGCAGAGGGGGATCAGGCCTCGAGTTTAATGGATGAGCAAGATGTTGTCAAGAGCTCCATCTCTGACAACTCAGATGCCGGTGAATTGTGTCCTGATTCTCAAGACCCTGAGAATGACAGCAAGTTGAAATTGATTAAGCCATGTGGTGCTGATGAGACTTGTAAAAATGATGCGGGCTTGGCTTCTCAATTACCGAAGAAAAGGTCAAGCTTTCCTCCATCGGCCCAAGCTTTTATTGATGCGGTCAAGAAGAATAGAGCTCTCCAGAAATTTCTTAGAAGTAAGTTAATTGAAATTGAAGCAAAAATTGGGGAAAACAAAAAGATAAGGGACAATGTTAAACTCCTTAAGGATTTCCAGGTTTCATGCATTAGAAAAACGGGAAGTGCTTTTTCACTGAGAAAGGACCCGCGTGTGCAGTTAATATCATCCAAAAAGTCTCCTGCATCAAATAAATCAAAGGTTGGTTGTGTAATGCTTCTATATTTCTGTGAACTCTAGTCCGAATTGTTATTCATATTGATATTGATGTTCATTCATTGTGATTTCATGGTCCCTGTTCAGGAATTTGTTTGTTTATAATGTGCTATATGACTGAATAATATTGCTCAAGATTTTCCTTCGTTTGAAACGTAATTTTGTAAATCACAAGAACTGTAGCTAATGTCTGTTTTGTTAGATGCTAATGTTATCTCCATATAGTCATTGGATTTAAATGGGTAATATATATCGAATAAGAGAGATGTTGGGTTCTCTCTTTACGTTCTTTGATTAGATTTGTAAAAAGTAGTCTTTCCCTATTATGGTATTGTGTCTGGGTGTCTGTCTTTTGGGCAGCTTGAGGGCTTCAAATTTGTTGCAACAATCTTTCCTAGTTAGTGGCTTAACCCAATATTAAACTACAATGAACTAGTACAAAGACCAAGATAAATTAGACATAAGCATAGCATTTGTGACATTCTTGGTATTGTCACTGTAAGTATTGGTTGGTAATCCTTGATTTGTTTTTCTTTTGGCAGAGCCATAATAAGAAAGCATCTGCAATGTGTTATGGCCCAGATGAGAATTCTCGTGTTGCTAACTATAAGATGGTATTGGAAAGATTTCCGCTTTCATTGACCAAGAAAAAATGGTCGGATAAGGAAAGGGAGAATCTTTCGAAGGGAATTAAGCAACAATTCCAAGAAACGTTGCTTCAAATTTCAGTAGATAGAATGAGGTAATAACAGTTTTTTTTTATTTTGTTAAATGTACCATTTGGACCTTTGTCATTGCAACCCTTTAATCCTGCCAAGGCCGGTCCCAAGCCCGGGTAAAATGGAGAGGGTTGTGTTAGGCCTCGACAGCCAACGTAAAACTTTGTCGAATCTCTATGACATGGACCAAATACGAAATAGTGTGAATGCTAGGTCGTTGCCCGGAAGCAACGCGCTGTATGGCTCGAGTACAGTGTCAAATGAGCAAGGGCCGCTGCATCGCCGCCTGGATGTAGTGAAAAATAAGCAAGGGTTCCCACATCTTCGTGAACGGGTGCGGGTAAAGAAGCTAGTTCATGAGAGTAGGATTCGTTTTGGAACTTGGAATATAGGTACTCTTACGGGTAAATCTATGGAAGTAGTAGACACTATGACTAGGAGGAGGATTAACTTTATGTGCCTACAAGAAACTAAGTGGGTGGGGAAAAAGGCGAGAGAATTAGATAGTTCAGGATTTAAGCTTTGGTACACGGGCGAAGTTAGATCAAGAAATGGGGTAGGCATCATTGTGGATAAGGAGTGGAAGAAAGATATTGTGGATGTTAAAAGGATAGGAGATCGGATTATAGCCTTAAAGTGTGTAGTGGAACAAGACACCTTTAACGTAATTAGCGTTTATGCACCTCAGGTAGGATTAGAAGAACACCTTAAAGTAAAGTTTTGGGAGGAGCTAGAAGGATTAATTCAGGATATTCCATTAGGAGAAAAGATTTTTCTAGGAGGGGATTTGAATGGGCATGTAGGGAGGGTTTCGAGAGGTTTCGAGGGTGTGCATGGGGGGTATGGTCTCGGGGAGGTAAATGCGGAGGGAAATTCCATCTTAGATTTTTCATCGGCTTTTGATCTTACTATAGCAAATACGTGTTTTAGGAAAAGAGAGGAGCATCTCATCACTTACAAGAGTGGGGCCTCTTGTTCTCAGATCGATTTCTTTCTCATTAGGAAAACAGACAGGAAGATCTGTTTAGACTGTAAAGTCATACCTGGAGAGGGCTTAACTACCCAACATAGAGTAATGGTGATGGATGTAAGGGTTAAGAGGAGGGCAAAGAGAAGAGACCGTAGGGGGGCCCCGCGAATCAAGTGGTGGCATTTAAAGGGTGACAAACAAAGGATATTCCAACACAAGATATTAGAGGGAGGTTTCAGGCAACCACATGGAAGCGCTAATGATATGTGGGGGAGGATGGCTCATGAGATTAAGAAGGTGGCAAAAGAGACGTTGGGAGAATCTAGAGGTTTTGGACCTAGGGGTAAAGAATCTTGGTGGTGGAATGACAGTGTTCAGAGTAAAGTTCGGATCAAGAGAGATTGTTTTAGAGATTGGTCTAAGTGTAAAAATGCCGAAACTTGGGATAAATATAAGATAGCTAGGAAAGAGGCTAAGAAGGCGGTAAGCGAAGCGAGAACTCAAGCATTTGAAGGATTATACCAATCTTTAGGTACCAAGGAGGGGGAGAAATCTATATACAAGCTTGCGAAGGGACGAGAACGAAAGACAAGAGACCTGGACCAAGTGAAGTGTATTAAGGATGAAGAGGGTAGAGTTTTGGTGCAAGAGAGAGATATTAAGGATCGATGGAAGAAGTATTTCCACAACTTATTTAATGAAGGATATGAGATCTTACCAGACTCTAACAGGTTAGACATCAGAGAGGAGGACCGGAACTATAACTATTATCGTCGGATTCAGGAGCACGAGGTGAAAGAAGCGTTGAAAAGGATGAGTAATGGCAAGGCAGTTGGGCCGGACAACATACCTATCGAAGTGTGGAAAAGTCTTGGCGATAGAGGAGTTGGGTGGCTCACAAAACTTTTCAACGAGATTATGAGGACGAAGAAAATGCCAGACGAGTGGAGAAGAAGCACCTTAATTCCAATCTATAAGAACAAGGGGGATATACAAGATTGCGCGAATTATAGGGGAATTAAGCTAATGAGTCATACCATGAAGTTATGGGAGAGGGTAATTGAGCGAAGACTAAGAAAAGAGACTCACGTTACGGATAACCAATTTGGTTTTATGCCTGGGAGGTCGACTATGGAAGCGATCTACTTACTTCGACGCGTGATGGAGCGATATCGGACGGATAAAAAAGACTTGCACTTAGTTTTCATTGATTTGGAGAAGGCGTATGATAGAGTACCTAGAGAGATTTTGTGGAAAGCCCTGGAGAAGAAAGGGGTGAGGATTGCCTATATTAGAGCTATCCAGGATATGTATGAGGGCGCTTCGACTAGTGTGAGGACGCAGGATGGGGATACCGGAGATTTTCCCATAACAATAGGACTGCACCAAGGGTCAACCCTAAGTCCTTATCTTTTTACTTTAGTTTTGGATGTACTGACGGAACACATCCAAGAGTTAGCACCGAGATGTATGCTTTTTGCAGATGATGTAGTCTTGCTTGGTGAGTCGAGGGAGGAGTTAAATGGGAGGCTAGAGACTTGGAGGCAAGCCTTAGAAGCGTATGGTTTCCGCCTGAGTAGAAACAAGACGGAGTATATGGAATGTAACTTCAGTAAAAGGAGAAGTGGGTCTACCTTAGAGGTGAAAGTTGGAGATCATATCATACCCCAAGTTACACGGTTTAGATATCTTGGGTCCATAGTACAAAATGACGGAGAAATAGAAGCTGATGTACATCATCGTATTCAAGCTGGGTGGTTGAAATGGAGAAGAGCCTCAGGTGTGTTGTGCGATAAGAAGGTACCACTTAAGCTGAAAGGAAAGTTCTATCGGACAGCAGTCAGACCGGCAATGTTGTATGGTACGGAGTGTTGGGCGGTTAAGAGCCAACACGAGAGTAAAGTAAGCGTAGCGGAGATGAGGATGTTGCGTTGGATGAGTGGTAAGACTAGACATGATAGGATTAGGAATGACATCATTAGAGAGAGAGTGGGGGTAGCACCTATAGTAGAAAAGTTGGTAGAAAATAGGCTTAGATGGTTTGGACATGTAGAGAGAAGACCAATAGACGCCGTGGTAAGAAGAGTAGATCAAATGGAGGAGAGTCAGGTTAAAAGAGGTAGAGGAAGACCTAAGAAAACCATTAGAGAAACCATTAGAAAAGATTTAGAGGTCAATGAGTTGGATCCAAATATGGTATTTGATAGAACATTATGGCGGCATTTGATCCATGTAGCCGACCCCACTTAGTGGGATAAGGCTTGGTTGTTGGTTGGTTGTTGGTTGGTCATTGCAACCCTTTCCAGTATTGAGTACTGATTTTATTCTTCAATGTATTTACTTCACAGTTCAGAGTGTTTACCTGGAGATGCAAATGACATGGATAACCTTATTGAATCAGTTAAAGGTATTGAAATCACACCAGAGAGGATTAGAGAATTTTTACCTAAAGTTAATTGGGATCGATTGGCTTCTATGTATGCCACTGGCCGTACTGGTGCTGAATGTGAATCAAGGTATGTATTTCTTAATTGGTGAATTCTGTTTTCCTATGCAAGCAAAGATAGTTATTGATGATAAAGCTTTGTGCTTCATGTTTTTATTATTGCGCCATGCTCATGCTTCATATCATATCTTGTCTTATGATCATGAGAACCACATCTCCCCTGTTATTTAGATACCGTGGTTTGAACATTTGTAAGGATATTTTATATATTTAATAGATGACTGACGCTAACATAGAGTTTGAAGCTAGTGAAAGAAAATATGAAGATAGTACTGTGATTTATTCGCATGTATGCCAGTTTACTTTTTGTTTGGGTGGGGGAGATCATGACTAGATGTAAGATTCATATTAAATTGATTCATATTAAATTGAATTAGGATCCTGCTTAGGATGATGTGTATGTGAATGTTCCATACCTGTTTGATAAATTAGGTTTGGGTATTAAAGGTGTTCCATCAATCCCATACCATACCTGTAGGGAGGATCAACGTGTCTCTTGCTGTGCACGTTTGATGTGTTTTCAGATGCTTCATTATCAGTGTTATATTATTTGTATATTCAACACAGTTCTTTGACTATTGTTTCGTGTTTACTGCCTTTCTTTGAAGAATTTCTTCCTGGACATTGCAGACATCTATGACGATCACAATCACAGACAGTTTATCCTTTTTGGTTTTCCATAAGGGTTCAAGATCAACATAGATCATGCAGGTGGGACTGTACATGAACTGATTTTTAAAATGGTGCTGCTTAACATGTCTGTGATGATTGTCATCACAGATGTCTGTGACACTCCTTTCTTGAATCGAATGTAGACCATAGAATAACATTTGTGTGAATGGATGGATTCTGATACATATACTTGACTAATTCTTTTAATGTTCGCAACCATAGGTGGTTGAATTGTGAAGACCCTTTGATCAACCATGGCCCATGGACTTCTGAAGAGGATAAATCTCTTTTGATTATTGTCCAAGAGAAGGGTATCAGGAACTGGTTTGACATTGCTGTATCATTGGCCACAAACAGGCTTCCATTTCAATGCTTGGCACGATTTCAAAGGAGCTTAAATCCTTCGATTATAAATAGTGAATGGACTGGGGAAGAAGATGCTCAACTTCGTGATGCTGTTGCATGCTTTGGTGAGTGTGATTGGCAGTCTGTAGCTACGTATTTAGAACGGCGGACGGGAACCCAGTGCTCGAATAGGTTGGTTCACTCTTTGATTTAATTTTGTACTACATACATGTTTAGAATTTTTTTGCATTTTGCTAGTGATTCTAGTAATTCAATATCTGAAATCAGAACAATTTTCAATGGTAGCCTATCACTTAAATTAACAATGTGCATGTTATATGCTAGTTCAAAGCCAATTCATAAGTATTTCATTTACAACTGTTGATGAATTAAAATAATTTATTTTTTCATGGGAAAGTCATGTGGCCTCACAGGTGTAAGTGACTAACAAATAATAATTAGATTTCAGCTCAGTTTAATTTGAACCTCAACTGCTTCACTTCTTTTCTTATATAGTAGTATGGTTGGAAGATTGAGAAAAGTATTATGCCACACCACCTAAAGCTTCAAGCGTTTAACATTCTTTTAGCAACACAAAAAACAGCCATCTAGCCCGTTGTATGAGTTGTTGATTTACATTCTGGTTTTATCTGAGAGTGGTTACAACTTTTAGATGGAGACATTTTATGTTTTCCCCATCCCAAGCTGCTATGTATTGAATGAATTGCTTCATGTAGAAATTATTGTGCCCTCCTAGAGGACAGATGCTAGTCTCTTGAGGCCGTGCATATTTTTTTTTTTTGCCTTGATTACCACATGCATCTTAAACTCCATTTGGAATAGGCTTAACCCCCCAAATCCTCCTTATATTTCGCTTTCATGGTTGCTAAATGTAAATATAAAAATATAAAACGAGAATGATATGCGTATTCTTGATAATGAAATGACATGGTTAGTAATTAACATAGCCTGATCACTTATATAAAAAACTGAAACAGGATCACCCTAAATTGGCATGAATGTTAAGTACATTGGAGAACAGGAGTTGTTTTTTGTATGCTGCTGAATTTTGTCTGCTAATGCAACAAATCATAATTTATGCAGATGGAAAAAATCAATTTGTCCTGTGAGGAAAGGGACCTTTACCCCTGAGGAGGACGAACGCCTTACTGTAGCGGTCATGCTGTTTGGACGGAAGTGGAAGCAAATAACCAAATATGTTCCTGGCCGTATCCAATCTCAGTGTAGGGACAGGTATTGCATTGTATTATAAACATTTTGGCAACAGAGTTTTTATGGTTTAGACTTCTTGTAATTCTTGAGCATTTTTATGGCAGATACCTTAATAGTTTGGACCCTTCTTTGAAATGGAGTGAATGGACTAAAGAAGAGGATTCAAGATTAGAAGCTGCAATCACCAAATATGGATGTTGCTGGTCTAAGGTTGCTGAAGATGTGACTCCCCGCACTGATTGTCAATGCCGGAAGTACGCTTCTAGTATTAACTTCTTTGATGAAAATCTTTGTTTTAAAAATCTTTCAGTTTTGTCATGTTACCCATACCTATATATGTTTGTTTCATTGGTCAGGAGATGGATGGTGTTACATCCTGAACAAGCTCTTCTGCTTAAAGAAGCAAAAAAGAAGCAAAGGTCTCAGCTTTCCAGGAACTTTGTCGATCGAGAATCTGAACGGCCCGTCCTTCCAGTGAATGACTTAATTCCTTCACAAATGGTAGTTCCACCATCTGATGTTGGTGCTGAAAATCTCCGAAGGAAGCGGAAGAGAAAGTCAAGGTACATTCTCTTTCTCTTTAAACTTCTCTTTAATTGATTGTTAACAGCATAGTTATATGATGATGCCAGCCTTGTTAGAATTATTATTGTTCCAGTAAATTGTACTGGCCATTTAGTGTATTGATTTTTGCTATAGGTGTACCTTTGTTTTTTAATTCCCACTCATTTCTTGCAGTCACCAGAAAGAGAGGTCCAAAAATCATGCAAAAGAGACTGGACTTTGTCCTGAGGAAGTACAAGATGCAGATCCCAAGAAAGAGAGGCCTAAAAGACATGCAAAAAAGAAGGTACCATTTTGTCCTGAGGAACAAGATAAAGTTCCCAAGAAAGAGAAGCCTAAAAGACATTCAAAAAAGGCTCGGATTTGTCCTGAGGAAGTACAATTTATAGCAGCATATAGTGATAAGATGAAGACTTCTGATCGAGGTGTTCCATTGTCTGAGCAAAGCGATGTTCTCAATAATATGAGATCTAAAAGACGTGCTAAAAAGGGTCGAATTCATCTCAAGGAAGTAGAGAAGAATATAGCATTTAGTGACAAGGTCAAGACCTGTAGCAAGAGTTCGGAAAGTCAAGATGGAGATGACATCACACTTGCTTGCTGGCGCAACAAATTAAAGAAGAAACTATCTAACTGTACCAAAAATGCGAGCCAGACTTCGTCTTTCTCTAGGACAAAAATTGTATCTAAGCAGGTTGGAAATCAAATCCCATCTAATGAGCAAGACGGATTGTCTCTTACATGTGTTACTGGTGGAACTAAAGATTTGTTAATCCAAACAGAAGTTGATTCTAGTGAACAAGTGAGAAAACCAGAAGGTGAAAATGCAGCTAGAAAACCAGAGGATGCACATAATATGAATGGTGATGGCAATGATAAGCCTCTTCAGGTCTATGTGAGAAGGAAAACAAAGAAATGGAGTCAAGATACTGAAGGATGCCGTGCTTGCTCTCCTTCCAAATTGAAAATGGGATCGATGTCACTCCATGGAAACAAGGCAACCACCATTTCTGATGGCAGAGAACCATCCATGTCAAAAGTTGTCGTAGAGGAGACTGTTTTACATGGTGGTGTGGCTGAAGCTGAACCGACAAACATAAATGTCATTGAAGAGGAGACTGATCTGCATGGTGGTGTTGCTCATGCTGAACCCACAAACATCAACGTGGAAGAAAATGATGACGACCTTCCTCTTTCCACCTTGCAAAACAAGATGATGAGACGAAAAAGACGGCACTCCATTAGGAAATAA

Protein sequence

>MS.gene05308.t1

MSPRTDDYEQDNTDHSSTATSSDDDDDGLKDDMAALARACRFTADEDEIEEVEDPLLSTGDAIAPFTTTATANEDSDPDDDLECLKRVQSLYKPTGNSVPSPVPMIAASGDDDEDDEDDFETVRAIFKRFSAYDGGGKEAWAEGDQASSLMDEQDVVKSSISDNSDAGELCPDSQDPENDSKLKLIKPCGADETCKNDAGLASQLPKKRSSFPPSAQAFIDAVKKNRALQKFLRSKLIEIEAKIGENKKIRDNVKLLKDFQVSCIRKTGSAFSLRKDPRVQLISSKKSPASNKSKSHNKKASAMCYGPDENSRVANYKMVLERFPLSLTKKKWSDKERENLSKGIKQQFQETLLQISVDRMSSECLPGDANDMDNLIESVKGIEITPERIREFLPKVNWDRLASMYATGRTGAECESRWLNCEDPLINHGPWTSEEDKSLLIIVQEKGIRNWFDIAVSLATNRLPFQCLARFQRSLNPSIINSEWTGEEDAQLRDAVACFGECDWQSVATYLERRTGTQCSNRWKKSICPVRKGTFTPEEDERLTVAVMLFGRKWKQITKYVPGRIQSQCRDRYLNSLDPSLKWSEWTKEEDSRLEAAITKYGCCWSKVAEDVTPRTDCQCRKRWMVLHPEQALLLKEAKKKQRSQLSRNFVDRESERPVLPVNDLIPSQMVVPPSDVGAENLRRKRKRKSSHQKERSKNHAKETGLCPEEVQDADPKKERPKRHAKKKVPFCPEEQDKVPKKEKPKRHSKKARICPEEVQFIAAYSDKMKTSDRGVPLSEQSDVLNNMRSKRRAKKGRIHLKEVEKNIAFSDKVKTCSKSSESQDGDDITLACWRNKLKKKLSNCTKNASQTSSFSRTKIVSKQVGNQIPSNEQDGLSLTCVTGGTKDLLIQTEVDSSEQVRKPEGENAARKPEDAHNMNGDGNDKPLQVYVRRKTKKWSQDTEGCRACSPSKLKMGSMSLHGNKATTISDGREPSMSKVVVEETVLHGGVAEAEPTNINVIEEETDLHGGVAHAEPTNINVEENDDDLPLSTLQNKMMRRKRRHSIRK