Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88238.t1 | XP_003606114.1 | 87.1 | 589 | 56 | 1 | 1 | 569 | 1 | 589 | 7.80E-288 | 999.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88238.t1 | F4HW17 | 49.8 | 584 | 266 | 5 | 8 | 569 | 11 | 589 | 8.4e-158 | 558.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88238.t1 | G7JIE2 | 87.1 | 589 | 56 | 1 | 1 | 569 | 1 | 589 | 5.6e-288 | 999.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051651 | MS.gene88238 | 0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene88238 | -0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene88238 | 0.804871 | 1.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88238.t1 | MTR_4g053270 | 89.643 | 589 | 41 | 1 | 1 | 569 | 1 | 589 | 0.0 | 999 |
| MS.gene88238.t1 | MTR_5g077170 | 45.904 | 586 | 291 | 4 | 8 | 569 | 8 | 591 | 0.0 | 545 |
| MS.gene88238.t1 | MTR_6g074910 | 44.351 | 593 | 301 | 5 | 1 | 569 | 1 | 588 | 0.0 | 528 |
| MS.gene88238.t1 | MTR_8g016270 | 30.156 | 577 | 345 | 8 | 43 | 567 | 76 | 646 | 3.09e-94 | 301 |
| MS.gene88238.t1 | MTR_2g006300 | 32.414 | 580 | 352 | 7 | 20 | 569 | 14 | 583 | 6.59e-92 | 294 |
| MS.gene88238.t1 | MTR_8g088730 | 31.904 | 583 | 345 | 11 | 24 | 569 | 22 | 589 | 2.45e-89 | 287 |
| MS.gene88238.t1 | MTR_1g014080 | 29.654 | 607 | 352 | 10 | 31 | 567 | 34 | 635 | 6.17e-89 | 287 |
| MS.gene88238.t1 | MTR_3g105950 | 31.023 | 577 | 338 | 10 | 46 | 567 | 63 | 634 | 2.89e-87 | 283 |
| MS.gene88238.t1 | MTR_0204s0010 | 29.295 | 454 | 290 | 9 | 137 | 569 | 5 | 448 | 2.30e-61 | 209 |
| MS.gene88238.t1 | MTR_5g098730 | 26.266 | 632 | 363 | 15 | 29 | 567 | 42 | 663 | 3.18e-57 | 203 |
| MS.gene88238.t1 | MTR_3g082140 | 26.981 | 593 | 352 | 14 | 47 | 567 | 74 | 657 | 2.54e-55 | 198 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88238.t1 | AT1G08350 | 50.514 | 584 | 262 | 5 | 8 | 569 | 11 | 589 | 0.0 | 598 |
| MS.gene88238.t1 | AT1G08350 | 50.514 | 584 | 262 | 5 | 8 | 569 | 11 | 589 | 0.0 | 598 |
| MS.gene88238.t1 | AT1G08350 | 51.874 | 507 | 242 | 2 | 65 | 569 | 2 | 508 | 0.0 | 555 |
| MS.gene88238.t1 | AT2G01970 | 44.857 | 593 | 302 | 4 | 1 | 569 | 1 | 592 | 0.0 | 541 |
| MS.gene88238.t1 | AT1G14670 | 45.194 | 593 | 300 | 4 | 1 | 569 | 1 | 592 | 0.0 | 536 |
| MS.gene88238.t1 | AT5G37310 | 45.254 | 590 | 298 | 4 | 4 | 569 | 5 | 593 | 0.0 | 528 |
| MS.gene88238.t1 | AT5G37310 | 45.254 | 590 | 298 | 4 | 4 | 569 | 5 | 593 | 0.0 | 528 |
| MS.gene88238.t1 | AT1G08350 | 48.544 | 515 | 238 | 5 | 8 | 500 | 11 | 520 | 1.50e-171 | 497 |
| MS.gene88238.t1 | AT3G13772 | 30.782 | 588 | 337 | 10 | 39 | 567 | 63 | 639 | 1.00e-96 | 308 |
| MS.gene88238.t1 | AT2G24170 | 31.076 | 576 | 341 | 9 | 43 | 567 | 65 | 635 | 1.63e-92 | 297 |
| MS.gene88238.t1 | AT1G10950 | 31.424 | 576 | 355 | 7 | 24 | 569 | 24 | 589 | 1.06e-90 | 291 |
| MS.gene88238.t1 | AT1G55130 | 29.082 | 588 | 347 | 10 | 39 | 567 | 59 | 635 | 1.73e-89 | 289 |
| MS.gene88238.t1 | AT5G25100 | 30.860 | 593 | 335 | 10 | 36 | 567 | 71 | 649 | 3.98e-83 | 273 |
| MS.gene88238.t1 | AT5G25100 | 30.860 | 593 | 335 | 10 | 36 | 567 | 64 | 642 | 4.33e-83 | 272 |
| MS.gene88238.t1 | AT5G10840 | 30.626 | 591 | 337 | 9 | 36 | 567 | 70 | 646 | 1.32e-82 | 271 |
| MS.gene88238.t1 | AT5G35160 | 26.833 | 641 | 371 | 16 | 8 | 569 | 9 | 630 | 1.32e-61 | 214 |
| MS.gene88238.t1 | AT5G35160 | 26.689 | 607 | 357 | 13 | 40 | 569 | 63 | 658 | 3.30e-61 | 214 |
| MS.gene88238.t1 | AT5G35160 | 26.689 | 607 | 357 | 13 | 40 | 569 | 63 | 658 | 3.30e-61 | 214 |
| MS.gene88238.t1 | AT5G35160 | 26.689 | 607 | 357 | 13 | 40 | 569 | 63 | 658 | 3.30e-61 | 214 |
| MS.gene88238.t1 | AT4G12650 | 26.636 | 657 | 377 | 15 | 5 | 567 | 5 | 650 | 1.11e-59 | 210 |
| MS.gene88238.t1 | AT2G24170 | 28.125 | 384 | 222 | 7 | 43 | 376 | 65 | 444 | 1.59e-46 | 169 |
Find 128 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGATGATCTTCCATTT+TGG | 0.104752 | 4.4:+49190164 | MS.gene88238:CDS |
| TTACAACTATCCTTCTTTAT+TGG | 0.166873 | 4.4:+49194197 | MS.gene88238:CDS |
| TCGGTTTAGGTCCAAGTTTC+AGG | 0.182537 | 4.4:+49193110 | MS.gene88238:CDS |
| TATGCTTTCTTCCTGATATT+TGG | 0.187363 | 4.4:+49194239 | MS.gene88238:CDS |
| ATCGTGATTATTAGTTTATT+TGG | 0.195282 | 4.4:+49193042 | MS.gene88238:CDS |
| ACACCATTTCAAATGTTTAT+TGG | 0.207200 | 4.4:+49193192 | MS.gene88238:CDS |
| ATACACTCTTCCTGGCATTT+TGG | 0.207826 | 4.4:+49193287 | MS.gene88238:CDS |
| AATTCACTTATTCGGTTATC+TGG | 0.221535 | 4.4:+49190368 | MS.gene88238:CDS |
| AAGCTTACAATTGATGAAAT+TGG | 0.229144 | 4.4:+49190097 | MS.gene88238:CDS |
| ACATTATTGCAATATCTTAC+AGG | 0.260840 | 4.4:+49192989 | MS.gene88238:CDS |
| CCCATCCATTCTCAGCAAAT+TGG | 0.263581 | 4.4:-49192808 | None:intergenic |
| TAGCGTACACCTGGTGTAAT+TGG | 0.283426 | 4.4:-49193245 | None:intergenic |
| AACATCAATGCCAACATCTT+TGG | 0.283609 | 4.4:-49190344 | None:intergenic |
| TGATGTTAAATTCACTTATT+CGG | 0.301127 | 4.4:+49190360 | MS.gene88238:CDS |
| CAAGCTGAACATGTGTAAAA+AGG | 0.322583 | 4.4:-49190249 | None:intergenic |
| CGATCCCATTACTTGCATTC+GGG | 0.330440 | 4.4:+49193073 | MS.gene88238:CDS |
| GAGTAATTGGATATCGGTTT+AGG | 0.339176 | 4.4:+49193097 | MS.gene88238:CDS |
| GTTTGTATGAGTTCAAATTC+AGG | 0.346786 | 4.4:+49190041 | MS.gene88238:CDS |
| GTTATATCTACAGCGCGATT+TGG | 0.348460 | 4.4:-49190322 | None:intergenic |
| TCGATCCCATTACTTGCATT+CGG | 0.351439 | 4.4:+49193072 | MS.gene88238:CDS |
| AACTGATGGCACCAAATATC+AGG | 0.360427 | 4.4:-49194250 | None:intergenic |
| CTTCTGTTCCTAGCAATTAT+CGG | 0.376000 | 4.4:+49192683 | MS.gene88238:CDS |
| GAGAAGAGTGTTAGTCTAGC+TGG | 0.385735 | 4.4:+49192922 | MS.gene88238:CDS |
| ACCGTAACCAAACATGAAAA+TGG | 0.387429 | 4.4:-49194138 | None:intergenic |
| CATACCTCCACCACCATTCA+TGG | 0.389249 | 4.4:-49193389 | None:intergenic |
| CTAGCGCAAATGAAGAAGAT+AGG | 0.390988 | 4.4:+49190669 | MS.gene88238:CDS |
| GGAAGCTGTTGAATCTCTTT+CGG | 0.396624 | 4.4:-49193156 | None:intergenic |
| GGAGAAGGAGAATGAGTTGA+TGG | 0.400929 | 4.4:-49189423 | None:intergenic |
| TACAAAATATACACTCTTCC+TGG | 0.403164 | 4.4:+49193279 | MS.gene88238:CDS |
| TCTGGAATGCCACAGAATTA+CGG | 0.407619 | 4.4:+49190386 | MS.gene88238:CDS |
| GTTGTAGAAGTAAAAGCATT+TGG | 0.408783 | 4.4:+49190295 | MS.gene88238:CDS |
| GTCACAGCTGGACTCCCATT+GGG | 0.412663 | 4.4:+49193012 | MS.gene88238:CDS |
| AGCTTGATGTTCTTTACAAT+GGG | 0.413660 | 4.4:+49190266 | MS.gene88238:CDS |
| GTCCAAGTTTCAGGTCCCCT+TGG | 0.415276 | 4.4:+49193119 | MS.gene88238:CDS |
| GAATGGTGAAGATGAGGAGA+AGG | 0.426866 | 4.4:-49189438 | None:intergenic |
| GAAGATGAAAGTTTGATTCA+TGG | 0.429871 | 4.4:+49190205 | MS.gene88238:CDS |
| CATGGCCAATTTGCTGAGAA+TGG | 0.430352 | 4.4:+49192803 | MS.gene88238:CDS |
| TCCAAGTTTCAGGTCCCCTT+GGG | 0.431667 | 4.4:+49193120 | MS.gene88238:CDS |
| CAGATGAAAGAGCGAATAGA+AGG | 0.436318 | 4.4:-49192751 | None:intergenic |
| TCAAATATCTCGTATAAAGC+AGG | 0.441728 | 4.4:-49190528 | None:intergenic |
| AAGAGATTCAACAGCTTCCT+TGG | 0.444008 | 4.4:+49193160 | MS.gene88238:CDS |
| ACCCAAGGGGACCTGAAACT+TGG | 0.452480 | 4.4:-49193121 | None:intergenic |
| TGGGATTCTTTACATTGGTC+CGG | 0.456365 | 4.4:+49192942 | MS.gene88238:CDS |
| CAGCTTGATGTTCTTTACAA+TGG | 0.457083 | 4.4:+49190265 | MS.gene88238:CDS |
| CCAGGTGTACGCTAGTTTGT+GGG | 0.458018 | 4.4:+49193254 | MS.gene88238:CDS |
| AGCTTACAAGATTAGCAGTT+GGG | 0.461088 | 4.4:-49190777 | None:intergenic |
| CACCATGACTGTATGGATAG+AGG | 0.461983 | 4.4:-49192709 | None:intergenic |
| ACCAGGTGTACGCTAGTTTG+TGG | 0.462770 | 4.4:+49193253 | MS.gene88238:CDS |
| TTGTGTATCGTAAAGTTCAT+TGG | 0.462873 | 4.4:+49190452 | MS.gene88238:CDS |
| TTCAACAGCTTCCTTGGTAC+AGG | 0.467031 | 4.4:+49193166 | MS.gene88238:CDS |
| CCTCCAATAAACATTTGAAA+TGG | 0.469524 | 4.4:-49193195 | None:intergenic |
| ATTACGGTTTGAGAATAGAA+TGG | 0.470012 | 4.4:+49190402 | MS.gene88238:CDS |
| GGTCACAGCTGGACTCCCAT+TGG | 0.470714 | 4.4:+49193011 | MS.gene88238:CDS |
| GAATAGAAGGACAAGCCAAC+TGG | 0.478682 | 4.4:-49192738 | None:intergenic |
| GCCAATTTGCTGAGAATGGA+TGG | 0.479155 | 4.4:+49192807 | MS.gene88238:CDS |
| TGATGAAATTGGTATCTTGA+AGG | 0.481322 | 4.4:+49190108 | MS.gene88238:CDS |
| CGGATATCTCTTTGTACCCA+AGG | 0.484114 | 4.4:-49193136 | None:intergenic |
| CCATTTCAAATGTTTATTGG+AGG | 0.484636 | 4.4:+49193195 | MS.gene88238:CDS |
| AAGAAGATAGGGAGGTTGGT+TGG | 0.486649 | 4.4:+49190681 | MS.gene88238:CDS |
| TGGATGAAAATTGCACCAAA+AGG | 0.486946 | 4.4:-49193225 | None:intergenic |
| TTTGTATGAGTTCAAATTCA+GGG | 0.499515 | 4.4:+49190042 | MS.gene88238:CDS |
| GAGAGTCCACCATGACTGTA+TGG | 0.501120 | 4.4:-49192716 | None:intergenic |
| AATAAGGACGGGTGCGGAGG+AGG | 0.503888 | 4.4:-49190731 | None:intergenic |
| TCACGATAATAGAGCCCAAT+GGG | 0.504953 | 4.4:-49193026 | None:intergenic |
| GAGAAGGAGAATGAGTTGAT+GGG | 0.506779 | 4.4:-49189422 | None:intergenic |
| AATGGTGATCGTTTGAGCAA+TGG | 0.518346 | 4.4:+49190019 | MS.gene88238:CDS |
| ATTGTAGAATGGTGAAGATG+AGG | 0.521362 | 4.4:-49189444 | None:intergenic |
| CATTATTGCAATATCTTACA+GGG | 0.521402 | 4.4:+49192990 | MS.gene88238:CDS |
| ATATCTTACAGGGTCACAGC+TGG | 0.526781 | 4.4:+49193000 | MS.gene88238:CDS |
| CTAGCTGGGATTCTTTACAT+TGG | 0.529641 | 4.4:+49192937 | MS.gene88238:CDS |
| ATCTTGAAGGAAGCTATAAA+CGG | 0.530516 | 4.4:+49190121 | MS.gene88238:CDS |
| CGCACTGTAGCCAATAAAGA+AGG | 0.533327 | 4.4:-49194207 | None:intergenic |
| TGAAAGTTTGATTCATGGTG+GGG | 0.534546 | 4.4:+49190210 | MS.gene88238:CDS |
| ATGAAAGTTTGATTCATGGT+GGG | 0.539192 | 4.4:+49190209 | MS.gene88238:CDS |
| AGAAGAGTGTTAGTCTAGCT+GGG | 0.542187 | 4.4:+49192923 | MS.gene88238:CDS |
| CTCAGCAAATTGGCCATGGA+AGG | 0.542407 | 4.4:-49192798 | None:intergenic |
| AGAAGGAGAATGAGTTGATG+GGG | 0.542606 | 4.4:-49189421 | None:intergenic |
| TAGCGCAAATGAAGAAGATA+GGG | 0.545410 | 4.4:+49190670 | MS.gene88238:CDS |
| AATGAAGAAGATAGGGAGGT+TGG | 0.554718 | 4.4:+49190677 | MS.gene88238:CDS |
| ATCGTTGTAGATGTGATTTG+AGG | 0.556673 | 4.4:-49189488 | None:intergenic |
| ACCATGACTGTATGGATAGA+GGG | 0.558598 | 4.4:-49192708 | None:intergenic |
| CATTCTCAGCAAATTGGCCA+TGG | 0.562379 | 4.4:-49192802 | None:intergenic |
| GGATATCTCTTTGTACCCAA+GGG | 0.562534 | 4.4:-49193135 | None:intergenic |
| CCCACAAACTAGCGTACACC+TGG | 0.564764 | 4.4:-49193254 | None:intergenic |
| TAGCTTACAAGATTAGCAGT+TGG | 0.564792 | 4.4:-49190778 | None:intergenic |
| AGTGTCGCAGCCAAAATGCC+AGG | 0.566462 | 4.4:-49193297 | None:intergenic |
| TACTCAACAGCATCCTTCCA+TGG | 0.574888 | 4.4:+49192785 | MS.gene88238:CDS |
| TCTCTTGGAGAAGTTCTCAA+TGG | 0.576224 | 4.4:+49190001 | MS.gene88238:CDS |
| CAAAGAAACTCTGAAACTGA+TGG | 0.577705 | 4.4:-49194264 | None:intergenic |
| ATTGTTGCGCTCGTAAATGT+TGG | 0.577891 | 4.4:+49193336 | MS.gene88238:CDS |
| CAAATATCTCGTATAAAGCA+GGG | 0.578014 | 4.4:-49190527 | None:intergenic |
| GTAGATATAACCAAAGATGT+TGG | 0.578689 | 4.4:+49190334 | MS.gene88238:CDS |
| GACATATGTTCAACTATCTG+TGG | 0.579107 | 4.4:+49193362 | MS.gene88238:CDS |
| AACGGTAGAAGATTGTAGAA+TGG | 0.584443 | 4.4:-49189455 | None:intergenic |
| CGATAATTGCTAGGAACAGA+AGG | 0.585429 | 4.4:-49192682 | None:intergenic |
| TCAAATCACATCTACAACGA+TGG | 0.586736 | 4.4:+49189490 | MS.gene88238:CDS |
| ATTTGAGGTTGATGCGGTAA+CGG | 0.587799 | 4.4:-49189473 | None:intergenic |
| AGAGGGTACCGATAATTGCT+AGG | 0.591090 | 4.4:-49192691 | None:intergenic |
| GTCATGGTGGACTCTCCAGT+TGG | 0.591186 | 4.4:+49192723 | MS.gene88238:CDS |
| TTTATACGAGATATTTGAAG+AGG | 0.593080 | 4.4:+49190533 | MS.gene88238:CDS |
| TGCAGATCTGTGCTGTGTGG+TGG | 0.593952 | 4.4:+49194107 | MS.gene88238:intron |
| TGGAAGACCATGAATGGTGG+TGG | 0.594903 | 4.4:+49193382 | MS.gene88238:CDS |
| GAAAGTTTGATTCATGGTGG+GGG | 0.605503 | 4.4:+49190211 | MS.gene88238:CDS |
| ATCACGATAATAGAGCCCAA+TGG | 0.607721 | 4.4:-49193027 | None:intergenic |
| TTATACGAGATATTTGAAGA+GGG | 0.612050 | 4.4:+49190534 | MS.gene88238:CDS |
| AAGATATTGCAATAATGTTG+AGG | 0.614798 | 4.4:-49192984 | None:intergenic |
| ATTCTCAAACCGTAATTCTG+TGG | 0.615995 | 4.4:-49190395 | None:intergenic |
| GTTGGTTGGAAGTCAATCCA+TGG | 0.623172 | 4.4:+49190695 | MS.gene88238:CDS |
| ACCCTCTATCCATACAGTCA+TGG | 0.624597 | 4.4:+49192707 | MS.gene88238:CDS |
| GATGAAAGTTTGATTCATGG+TGG | 0.627468 | 4.4:+49190208 | MS.gene88238:CDS |
| TATCTGTGGAAGACCATGAA+TGG | 0.629462 | 4.4:+49193376 | MS.gene88238:CDS |
| ATAGAGAATGCAACAAACAC+CGG | 0.633680 | 4.4:-49192961 | None:intergenic |
| ATCCCATTACTTGCATTCGG+GGG | 0.634423 | 4.4:+49193075 | MS.gene88238:CDS |
| CGCAAATGAAGAAGATAGGG+AGG | 0.637904 | 4.4:+49190673 | MS.gene88238:CDS |
| GATCCCATTACTTGCATTCG+GGG | 0.641089 | 4.4:+49193074 | MS.gene88238:CDS |
| CTCTATCCATACAGTCATGG+TGG | 0.644933 | 4.4:+49192710 | MS.gene88238:CDS |
| AAGACCATGAATGGTGGTGG+AGG | 0.651799 | 4.4:+49193385 | MS.gene88238:CDS |
| CAAAAGCAAAATGATGACGA+AGG | 0.660240 | 4.4:-49190491 | None:intergenic |
| CAGGTGTACGCTAGTTTGTG+GGG | 0.666363 | 4.4:+49193255 | MS.gene88238:CDS |
| CCAATTTGCTGAGAATGGAT+GGG | 0.667467 | 4.4:+49192808 | MS.gene88238:CDS |
| TATGCAAGATCAAGAATGAG+CGG | 0.669114 | 4.4:+49194170 | MS.gene88238:CDS |
| GAGCGCAACAATCACAATGA+CGG | 0.674592 | 4.4:-49193325 | None:intergenic |
| GTGTGCAGATCTGTGCTGTG+TGG | 0.676378 | 4.4:+49194104 | MS.gene88238:intron |
| GATATCTCTTTGTACCCAAG+GGG | 0.684564 | 4.4:-49193134 | None:intergenic |
| GAGGCTTGAATACATCACCA+TGG | 0.694814 | 4.4:-49190712 | None:intergenic |
| GATGTGATTTGAGGTTGATG+CGG | 0.702090 | 4.4:-49189479 | None:intergenic |
| AATGGTGTTCTCCTGTACCA+AGG | 0.705648 | 4.4:-49193177 | None:intergenic |
| CTGTGGAAGACCATGAATGG+TGG | 0.732393 | 4.4:+49193379 | MS.gene88238:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAAAATCAAATAATTA+AGG | + | chr4.4:49189907-49189926 | MS.gene88238:intron | 10.0% |
| !! | AATGAAAATCAAATAATTAA+GGG | + | chr4.4:49189908-49189927 | MS.gene88238:intron | 10.0% |
| !! | AAAAATACCAAAAAAAAACT+TGG | + | chr4.4:49191205-49191224 | MS.gene88238:intron | 15.0% |
| !! | AAAATACCAAAAAAAAACTT+GGG | + | chr4.4:49191206-49191225 | MS.gene88238:intron | 15.0% |
| !! | AAAGAAAAATTGAATGAAAA+TGG | - | chr4.4:49189622-49189641 | None:intergenic | 15.0% |
| !! | AGAAATTAAATTGAAAAGAA+AGG | - | chr4.4:49192586-49192605 | None:intergenic | 15.0% |
| !! | ATGAAAATCAAATAATTAAG+GGG | + | chr4.4:49189909-49189928 | MS.gene88238:intron | 15.0% |
| !! | ATTGTAAAATGAATATAGTT+AGG | - | chr4.4:49190640-49190659 | None:intergenic | 15.0% |
| !! | GGTTAAAAATGAAATAAAAA+TGG | - | chr4.4:49192871-49192890 | None:intergenic | 15.0% |
| !! | TTAAATATTTCTTGATTGTT+TGG | - | chr4.4:49191232-49191251 | None:intergenic | 15.0% |
| !!! | AAAAACCAAAATTTTGAATT+GGG | - | chr4.4:49192208-49192227 | None:intergenic | 15.0% |
| !!! | ACTTTGAAACTAAAATTTAT+CGG | - | chr4.4:49193809-49193828 | None:intergenic | 15.0% |
| !!! | CTATATTCATTTTACAATTT+AGG | + | chr4.4:49190642-49190661 | MS.gene88238:intron | 15.0% |
| !!! | CTTTTAATATTCTATATTCA+AGG | - | chr4.4:49192362-49192381 | None:intergenic | 15.0% |
| !!! | TTCTTTTCAATTTAATTTCT+TGG | + | chr4.4:49192586-49192605 | MS.gene88238:intron | 15.0% |
| !! | AAATAATTAAGGGGTTTAAT+TGG | + | chr4.4:49189918-49189937 | MS.gene88238:intron | 20.0% |
| !! | AATACATTTAATTGCTTCAA+AGG | + | chr4.4:49193875-49193894 | MS.gene88238:intron | 20.0% |
| !! | AGAAAAAACATTAAAAGTGA+TGG | - | chr4.4:49193451-49193470 | None:intergenic | 20.0% |
| !! | AGAGGAATATTTATGTAAAT+AGG | + | chr4.4:49192006-49192025 | MS.gene88238:intron | 20.0% |
| !! | GATATGATTTATAGTAAGTT+TGG | + | chr4.4:49191272-49191291 | MS.gene88238:intron | 20.0% |
| !! | TGAAAATTGAATGAAAATAG+AGG | - | chr4.4:49189584-49189603 | None:intergenic | 20.0% |
| !! | TGATGTTAAATTCACTTATT+CGG | + | chr4.4:49190360-49190379 | MS.gene88238:CDS | 20.0% |
| !! | TTCTAATATAGAAATCAAAG+AGG | + | chr4.4:49191644-49191663 | MS.gene88238:intron | 20.0% |
| !!! | AAGGATTTTATTACAAACAT+AGG | - | chr4.4:49190950-49190969 | None:intergenic | 20.0% |
| !!! | ATCGTGATTATTAGTTTATT+TGG | + | chr4.4:49193042-49193061 | MS.gene88238:CDS | 20.0% |
| !!! | ATTCTATCTTTTTCACTATT+GGG | - | chr4.4:49189982-49190001 | None:intergenic | 20.0% |
| !!! | CAAAAACCAAAATTTTGAAT+TGG | - | chr4.4:49192209-49192228 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAGTACAGGAATA+GGG | + | chr4.4:49193898-49193917 | MS.gene88238:intron | 20.0% |
| !!! | TTTTGACATTATGGTATATA+TGG | - | chr4.4:49194301-49194320 | None:intergenic | 20.0% |
| ! | AAAGAATATTAAAGGATCGA+GGG | + | chr4.4:49192300-49192319 | MS.gene88238:intron | 25.0% |
| ! | AAAGTAAACGACTTTATGTT+AGG | - | chr4.4:49192614-49192633 | None:intergenic | 25.0% |
| ! | AAGATATTGCAATAATGTTG+AGG | - | chr4.4:49192987-49193006 | None:intergenic | 25.0% |
| ! | AAGCTTACAATTGATGAAAT+TGG | + | chr4.4:49190097-49190116 | MS.gene88238:CDS | 25.0% |
| ! | AATTCTATATGCATTTCTCA+AGG | + | chr4.4:49192832-49192851 | MS.gene88238:intron | 25.0% |
| ! | ACACCATTTCAAATGTTTAT+TGG | + | chr4.4:49193192-49193211 | MS.gene88238:CDS | 25.0% |
| ! | ACATGCATATCTATCTATTT+GGG | - | chr4.4:49193638-49193657 | None:intergenic | 25.0% |
| ! | ACATTATTGCAATATCTTAC+AGG | + | chr4.4:49192989-49193008 | MS.gene88238:CDS | 25.0% |
| ! | ACTGTTAGGATATAGAATAA+AGG | + | chr4.4:49191934-49191953 | MS.gene88238:intron | 25.0% |
| ! | ATATTAAAAGTAGTTAGAGC+AGG | + | chr4.4:49192372-49192391 | MS.gene88238:intron | 25.0% |
| ! | CAATTTACAAGTAAACTGTT+AGG | + | chr4.4:49191920-49191939 | MS.gene88238:intron | 25.0% |
| ! | CATTATTGCAATATCTTACA+GGG | + | chr4.4:49192990-49193009 | MS.gene88238:CDS | 25.0% |
| ! | CTACTTTGTTGACAAAAAAT+GGG | - | chr4.4:49189525-49189544 | None:intergenic | 25.0% |
| ! | CTGTTAGGATATAGAATAAA+GGG | + | chr4.4:49191935-49191954 | MS.gene88238:intron | 25.0% |
| ! | GGAATATTTATGTAAATAGG+AGG | + | chr4.4:49192009-49192028 | MS.gene88238:intron | 25.0% |
| ! | GTCAATAAATTCATCTTTGA+AGG | + | chr4.4:49191378-49191397 | MS.gene88238:intron | 25.0% |
| ! | TAAGAATTGTGATATCAATG+TGG | - | chr4.4:49193754-49193773 | None:intergenic | 25.0% |
| ! | TACAGAAGTTGAAAGAATTA+GGG | - | chr4.4:49191451-49191470 | None:intergenic | 25.0% |
| ! | TACATGCATATCTATCTATT+TGG | - | chr4.4:49193639-49193658 | None:intergenic | 25.0% |
| ! | TAGAAAGATATCATATTCCA+TGG | - | chr4.4:49191490-49191509 | None:intergenic | 25.0% |
| ! | TAGTTTCAAAGTTTGTACAT+AGG | + | chr4.4:49193817-49193836 | MS.gene88238:intron | 25.0% |
| ! | TGGTAATTCATAGTATTCAT+AGG | - | chr4.4:49189669-49189688 | None:intergenic | 25.0% |
| ! | TGTTAGGATATAGAATAAAG+GGG | + | chr4.4:49191936-49191955 | MS.gene88238:intron | 25.0% |
| ! | TTAAGAGTAATTAGAGTAGT+TGG | + | chr4.4:49191969-49191988 | MS.gene88238:intron | 25.0% |
| ! | TTAAGAGTAGCATAAATGTT+AGG | + | chr4.4:49191179-49191198 | MS.gene88238:intron | 25.0% |
| ! | TTACAACTATCCTTCTTTAT+TGG | + | chr4.4:49194197-49194216 | MS.gene88238:CDS | 25.0% |
| ! | TTATACGAGATATTTGAAGA+GGG | + | chr4.4:49190534-49190553 | MS.gene88238:CDS | 25.0% |
| ! | TTTATACGAGATATTTGAAG+AGG | + | chr4.4:49190533-49190552 | MS.gene88238:CDS | 25.0% |
| ! | TTTGTATGAGTTCAAATTCA+GGG | + | chr4.4:49190042-49190061 | MS.gene88238:CDS | 25.0% |
| !! | ATTACAAAGCTTTATACTGA+AGG | - | chr4.4:49194062-49194081 | None:intergenic | 25.0% |
| !! | ATTTTGTACAAGATAAGAGT+GGG | + | chr4.4:49191087-49191106 | MS.gene88238:intron | 25.0% |
| !! | GAAAGGACTATTTTATTGAA+AGG | - | chr4.4:49192569-49192588 | None:intergenic | 25.0% |
| !! | TATCTCTATCTTTGTTTACT+AGG | - | chr4.4:49193782-49193801 | None:intergenic | 25.0% |
| !! | TGATTTTACTTAAGATGTCA+TGG | - | chr4.4:49193531-49193550 | None:intergenic | 25.0% |
| !! | TGTTCTCTTTTCTTTAATTC+TGG | + | chr4.4:49193944-49193963 | MS.gene88238:intron | 25.0% |
| !! | TTACAAAGCTTTATACTGAA+GGG | - | chr4.4:49194061-49194080 | None:intergenic | 25.0% |
| !! | TTTTCTCATGTTACACAAAT+GGG | - | chr4.4:49191712-49191731 | None:intergenic | 25.0% |
| !!! | GATTCTATCTTTTTCACTAT+TGG | - | chr4.4:49189983-49190002 | None:intergenic | 25.0% |
| !!! | GTTTTAAAAAGTACAGGAAT+AGG | + | chr4.4:49193897-49193916 | MS.gene88238:intron | 25.0% |
| !!! | TACAAGAGAAGATTTTTAGT+AGG | + | chr4.4:49190597-49190616 | MS.gene88238:intron | 25.0% |
| !!! | TCAAAGGTTTTAAAAAGTAC+AGG | + | chr4.4:49193891-49193910 | MS.gene88238:intron | 25.0% |
| AAAACAATTTGTCCTTGTCT+AGG | + | chr4.4:49191830-49191849 | MS.gene88238:intron | 30.0% | |
| AAAACTAGAGGCTGAATATT+TGG | - | chr4.4:49190859-49190878 | None:intergenic | 30.0% | |
| AAACAATTTGTCCTTGTCTA+GGG | + | chr4.4:49191831-49191850 | MS.gene88238:intron | 30.0% | |
| AAGCATTTACCTATTAGACA+GGG | - | chr4.4:49191316-49191335 | None:intergenic | 30.0% | |
| AATTCACTTATTCGGTTATC+TGG | + | chr4.4:49190368-49190387 | MS.gene88238:CDS | 30.0% | |
| ACAAACACAACATTTAGTCA+AGG | - | chr4.4:49191567-49191586 | None:intergenic | 30.0% | |
| ACAACAGCAAAAAATAAGGA+CGG | - | chr4.4:49190746-49190765 | None:intergenic | 30.0% | |
| ACACTTCATATATTGTTGTG+AGG | - | chr4.4:49190895-49190914 | None:intergenic | 30.0% | |
| ACATCGACACTTCTAATAAA+AGG | - | chr4.4:49189866-49189885 | None:intergenic | 30.0% | |
| ACATGCATTGTATGTGTTTA+AGG | - | chr4.4:49191614-49191633 | None:intergenic | 30.0% | |
| AGCTTGATGTTCTTTACAAT+GGG | + | chr4.4:49190266-49190285 | MS.gene88238:CDS | 30.0% | |
| ATCTTGAAGGAAGCTATAAA+CGG | + | chr4.4:49190121-49190140 | MS.gene88238:CDS | 30.0% | |
| ATGAAAGTTTGATTCATGGT+GGG | + | chr4.4:49190209-49190228 | MS.gene88238:CDS | 30.0% | |
| ATTACGGTTTGAGAATAGAA+TGG | + | chr4.4:49190402-49190421 | MS.gene88238:CDS | 30.0% | |
| CAAACACAACATTTAGTCAA+GGG | - | chr4.4:49191566-49191585 | None:intergenic | 30.0% | |
| CAAATATCTCGTATAAAGCA+GGG | - | chr4.4:49190530-49190549 | None:intergenic | 30.0% | |
| CATGCATTGTATGTGTTTAA+GGG | - | chr4.4:49191613-49191632 | None:intergenic | 30.0% | |
| CCATTTCAAATGTTTATTGG+AGG | + | chr4.4:49193195-49193214 | MS.gene88238:CDS | 30.0% | |
| CCTACTTTGTTGACAAAAAA+TGG | - | chr4.4:49189526-49189545 | None:intergenic | 30.0% | |
| CCTCCAATAAACATTTGAAA+TGG | - | chr4.4:49193198-49193217 | None:intergenic | 30.0% | |
| CGATCCTTTAATATTCTTTC+TGG | - | chr4.4:49192299-49192318 | None:intergenic | 30.0% | |
| GAAAGAATATTAAAGGATCG+AGG | + | chr4.4:49192299-49192318 | MS.gene88238:intron | 30.0% | |
| GAACTACTTGGATTTGAAAA+AGG | + | chr4.4:49189940-49189959 | MS.gene88238:intron | 30.0% | |
| GAAGATGAAAGTTTGATTCA+TGG | + | chr4.4:49190205-49190224 | MS.gene88238:CDS | 30.0% | |
| GTACAGAAGTTGAAAGAATT+AGG | - | chr4.4:49191452-49191471 | None:intergenic | 30.0% | |
| GTAGATATAACCAAAGATGT+TGG | + | chr4.4:49190334-49190353 | MS.gene88238:CDS | 30.0% | |
| GTCTAGATTTAGATTGGTAA+AGG | - | chr4.4:49190969-49190988 | None:intergenic | 30.0% | |
| GTGAAAAAGATAGAATCTCT+TGG | + | chr4.4:49189986-49190005 | MS.gene88238:CDS | 30.0% | |
| GTTTGTATGAGTTCAAATTC+AGG | + | chr4.4:49190041-49190060 | MS.gene88238:CDS | 30.0% | |
| TACAAAATATACACTCTTCC+TGG | + | chr4.4:49193279-49193298 | MS.gene88238:CDS | 30.0% | |
| TATGCTTTCTTCCTGATATT+TGG | + | chr4.4:49194239-49194258 | MS.gene88238:CDS | 30.0% | |
| TATGTAAATAGGAGGATACA+AGG | + | chr4.4:49192017-49192036 | MS.gene88238:intron | 30.0% | |
| TCAAATATCTCGTATAAAGC+AGG | - | chr4.4:49190531-49190550 | None:intergenic | 30.0% | |
| TCAAGTACACAATCAAAAGA+AGG | - | chr4.4:49193486-49193505 | None:intergenic | 30.0% | |
| TGATGAAATTGGTATCTTGA+AGG | + | chr4.4:49190108-49190127 | MS.gene88238:CDS | 30.0% | |
| TTAAGATGTCATGGCTATTA+AGG | - | chr4.4:49193522-49193541 | None:intergenic | 30.0% | |
| TTGTGTATCGTAAAGTTCAT+TGG | + | chr4.4:49190452-49190471 | MS.gene88238:CDS | 30.0% | |
| TTTCAAAGTTTGTACATAGG+AGG | + | chr4.4:49193820-49193839 | MS.gene88238:intron | 30.0% | |
| ! | AATTTTCATCCAATTACACC+AGG | + | chr4.4:49193236-49193255 | MS.gene88238:CDS | 30.0% |
| ! | ATTTTTGCATAAGGTGATTC+GGG | + | chr4.4:49191117-49191136 | MS.gene88238:intron | 30.0% |
| ! | CTATCTTTGTTTACTAGGAT+GGG | - | chr4.4:49193777-49193796 | None:intergenic | 30.0% |
| ! | CTTTTCTCATGTTACACAAA+TGG | - | chr4.4:49191713-49191732 | None:intergenic | 30.0% |
| ! | GATTTTACGTTCCTAATTTG+AGG | + | chr4.4:49192146-49192165 | MS.gene88238:intron | 30.0% |
| ! | GATTTTGTACAAGATAAGAG+TGG | + | chr4.4:49191086-49191105 | MS.gene88238:intron | 30.0% |
| ! | GATTTTTGCATAAGGTGATT+CGG | + | chr4.4:49191116-49191135 | MS.gene88238:intron | 30.0% |
| ! | TAGAAAAGTGCATGTTAGTA+AGG | - | chr4.4:49192650-49192669 | None:intergenic | 30.0% |
| ! | TCTAGCCCAATTCAAAATTT+TGG | + | chr4.4:49192200-49192219 | MS.gene88238:intron | 30.0% |
| ! | TCTATCTTTGTTTACTAGGA+TGG | - | chr4.4:49193778-49193797 | None:intergenic | 30.0% |
| ! | TTGGTAGTCTAGATTTAGAT+TGG | - | chr4.4:49190975-49190994 | None:intergenic | 30.0% |
| !! | AAGAGAAAAAAGAGTACTTC+TGG | - | chr4.4:49191011-49191030 | None:intergenic | 30.0% |
| !! | ATCTTGATGATCTTCCATTT+TGG | + | chr4.4:49190164-49190183 | MS.gene88238:CDS | 30.0% |
| !! | GTTGTAGAAGTAAAAGCATT+TGG | + | chr4.4:49190295-49190314 | MS.gene88238:CDS | 30.0% |
| !! | TATTAGAAGTGTCGATGTTA+CGG | + | chr4.4:49189868-49189887 | MS.gene88238:intron | 30.0% |
| !! | TCTTGATGATCTTCCATTTT+GGG | + | chr4.4:49190165-49190184 | MS.gene88238:CDS | 30.0% |
| !!! | CCATTTTTTGTCAACAAAGT+AGG | + | chr4.4:49189523-49189542 | MS.gene88238:CDS | 30.0% |
| !!! | TCCTTATTTTTTGCTGTTGT+GGG | + | chr4.4:49190746-49190765 | MS.gene88238:CDS | 30.0% |
| AACAATTTGTCCTTGTCTAG+GGG | + | chr4.4:49191832-49191851 | MS.gene88238:intron | 35.0% | |
| AACATCAATGCCAACATCTT+TGG | - | chr4.4:49190347-49190366 | None:intergenic | 35.0% | |
| AACGGTAGAAGATTGTAGAA+TGG | - | chr4.4:49189458-49189477 | None:intergenic | 35.0% | |
| AAGGAAGATACAAGGATAGA+GGG | + | chr4.4:49192332-49192351 | MS.gene88238:intron | 35.0% | |
| AATATTAAAGGATCGAGGGA+AGG | + | chr4.4:49192304-49192323 | MS.gene88238:intron | 35.0% | |
| AATGTGGATATTAAGCCATG+AGG | - | chr4.4:49193738-49193757 | None:intergenic | 35.0% | |
| ACAATCAAAAGAAGGAAGCT+AGG | - | chr4.4:49193478-49193497 | None:intergenic | 35.0% | |
| ACAGGAATCTTTGCAGAAAT+AGG | + | chr4.4:49192404-49192423 | MS.gene88238:intron | 35.0% | |
| ACCGTAACCAAACATGAAAA+TGG | - | chr4.4:49194141-49194160 | None:intergenic | 35.0% | |
| AGACTACCAAGTGATAGTAA+AGG | + | chr4.4:49190985-49191004 | MS.gene88238:intron | 35.0% | |
| AGCTTACAAGATTAGCAGTT+GGG | - | chr4.4:49190780-49190799 | None:intergenic | 35.0% | |
| AGTCAAGACAGAGAAATAGT+TGG | - | chr4.4:49192892-49192911 | None:intergenic | 35.0% | |
| ATAGAGAATGCAACAAACAC+CGG | - | chr4.4:49192964-49192983 | None:intergenic | 35.0% | |
| ATCGTTGTAGATGTGATTTG+AGG | - | chr4.4:49189491-49189510 | None:intergenic | 35.0% | |
| ATGAACTTTGGCCTCAAATT+AGG | - | chr4.4:49192160-49192179 | None:intergenic | 35.0% | |
| ATTCTCAAACCGTAATTCTG+TGG | - | chr4.4:49190398-49190417 | None:intergenic | 35.0% | |
| ATTGTAGAATGGTGAAGATG+AGG | - | chr4.4:49189447-49189466 | None:intergenic | 35.0% | |
| CAACAGCAAAAAATAAGGAC+GGG | - | chr4.4:49190745-49190764 | None:intergenic | 35.0% | |
| CAAGCTGAACATGTGTAAAA+AGG | - | chr4.4:49190252-49190271 | None:intergenic | 35.0% | |
| CAATGCCATGTAAAAACTAG+AGG | - | chr4.4:49190871-49190890 | None:intergenic | 35.0% | |
| CAGCTTGATGTTCTTTACAA+TGG | + | chr4.4:49190265-49190284 | MS.gene88238:CDS | 35.0% | |
| CTTCTGTTCCTAGCAATTAT+CGG | + | chr4.4:49192683-49192702 | MS.gene88238:CDS | 35.0% | |
| GACATATGTTCAACTATCTG+TGG | + | chr4.4:49193362-49193381 | MS.gene88238:CDS | 35.0% | |
| GACTTAAATTGTAACTGACC+TGG | - | chr4.4:49189701-49189720 | None:intergenic | 35.0% | |
| GAGTAATTAGAGTAGTTGGT+TGG | + | chr4.4:49191973-49191992 | MS.gene88238:intron | 35.0% | |
| GATGAAAGTTTGATTCATGG+TGG | + | chr4.4:49190208-49190227 | MS.gene88238:CDS | 35.0% | |
| GGGTCCAGAAAGAATATTAA+AGG | + | chr4.4:49192292-49192311 | MS.gene88238:intron | 35.0% | |
| TAATCACATGTGTCACATGT+CGG | + | chr4.4:49189828-49189847 | MS.gene88238:intron | 35.0% | |
| TAGCGCAAATGAAGAAGATA+GGG | + | chr4.4:49190670-49190689 | MS.gene88238:CDS | 35.0% | |
| TAGCTTACAAGATTAGCAGT+TGG | - | chr4.4:49190781-49190800 | None:intergenic | 35.0% | |
| TATGCAAGATCAAGAATGAG+CGG | + | chr4.4:49194170-49194189 | MS.gene88238:CDS | 35.0% | |
| TATGCATGTAACTGATCTTG+TGG | + | chr4.4:49193649-49193668 | MS.gene88238:intron | 35.0% | |
| TCAAATCACATCTACAACGA+TGG | + | chr4.4:49189490-49189509 | MS.gene88238:CDS | 35.0% | |
| TCCCACAACAGCAAAAAATA+AGG | - | chr4.4:49190750-49190769 | None:intergenic | 35.0% | |
| TGAAAGTTTGATTCATGGTG+GGG | + | chr4.4:49190210-49190229 | MS.gene88238:CDS | 35.0% | |
| TGGATGAAAATTGCACCAAA+AGG | - | chr4.4:49193228-49193247 | None:intergenic | 35.0% | |
| TTAAAAGTAGTTAGAGCAGG+TGG | + | chr4.4:49192375-49192394 | MS.gene88238:intron | 35.0% | |
| TTACCTATTAGACAGGGTAT+TGG | - | chr4.4:49191310-49191329 | None:intergenic | 35.0% | |
| ! | AATTTGAGGCCAAAGTTCAT+TGG | + | chr4.4:49192160-49192179 | MS.gene88238:intron | 35.0% |
| ! | ACTAACATGCACTTTTCTAC+AGG | + | chr4.4:49192651-49192670 | MS.gene88238:intron | 35.0% |
| ! | ATTTGAGGCCAAAGTTCATT+GGG | + | chr4.4:49192161-49192180 | MS.gene88238:intron | 35.0% |
| ! | CAAAAGCAAAATGATGACGA+AGG | - | chr4.4:49190494-49190513 | None:intergenic | 35.0% |
| ! | CTCTTGATTTTTGCTTTCAC+TGG | + | chr4.4:49191026-49191045 | MS.gene88238:intron | 35.0% |
| ! | CTTCGTCATCATTTTGCTTT+TGG | + | chr4.4:49190492-49190511 | MS.gene88238:CDS | 35.0% |
| ! | GAAGCATTTACCTATTAGAC+AGG | - | chr4.4:49191317-49191336 | None:intergenic | 35.0% |
| ! | TGATCTTGTGGTTTTCTGTA+GGG | + | chr4.4:49193661-49193680 | MS.gene88238:intron | 35.0% |
| !! | ATTGTTTTTCTCATGTCCCT+TGG | - | chr4.4:49191818-49191837 | None:intergenic | 35.0% |
| !! | CAAAGAAACTCTGAAACTGA+TGG | - | chr4.4:49194267-49194286 | None:intergenic | 35.0% |
| !! | CTTGATGATCTTCCATTTTG+GGG | + | chr4.4:49190166-49190185 | MS.gene88238:CDS | 35.0% |
| !! | GAGTAATTGGATATCGGTTT+AGG | + | chr4.4:49193097-49193116 | MS.gene88238:CDS | 35.0% |
| !! | GCCATTTTCATGTTTGGTTA+CGG | + | chr4.4:49194137-49194156 | MS.gene88238:CDS | 35.0% |
| !! | TCAACAGCCATTTTCATGTT+TGG | + | chr4.4:49194131-49194150 | MS.gene88238:CDS | 35.0% |
| !! | TTGATGATCTTCCATTTTGG+GGG | + | chr4.4:49190167-49190186 | MS.gene88238:CDS | 35.0% |
| !! | TTGTTTTTCTCATGTCCCTT+GGG | - | chr4.4:49191817-49191836 | None:intergenic | 35.0% |
| !!! | ATTGGAGGTTTTGTTCCTTT+TGG | + | chr4.4:49193210-49193229 | MS.gene88238:CDS | 35.0% |
| !!! | ATTTTTTGCTGTTGTGGGAA+TGG | + | chr4.4:49190751-49190770 | MS.gene88238:CDS | 35.0% |
| !!! | CTCTTTCATCTGTTTTTGCT+GGG | + | chr4.4:49192762-49192781 | MS.gene88238:CDS | 35.0% |
| !!! | GTCCTTATTTTTTGCTGTTG+TGG | + | chr4.4:49190745-49190764 | MS.gene88238:CDS | 35.0% |
| !!! | GTTTGGCCCAAGTTTTTTTT+TGG | - | chr4.4:49191215-49191234 | None:intergenic | 35.0% |
| !!! | TTCAGCCTCTAGTTTTTACA+TGG | + | chr4.4:49190863-49190882 | MS.gene88238:intron | 35.0% |
| !!! | TTTTTTGCTGTTGTGGGAAT+GGG | + | chr4.4:49190752-49190771 | MS.gene88238:CDS | 35.0% |
| AACTGATGGCACCAAATATC+AGG | - | chr4.4:49194253-49194272 | None:intergenic | 40.0% | |
| AAGAGATTCAACAGCTTCCT+TGG | + | chr4.4:49193160-49193179 | MS.gene88238:CDS | 40.0% | |
| AAGATACAAGGATAGAGGGA+AGG | + | chr4.4:49192336-49192355 | MS.gene88238:intron | 40.0% | |
| AAGCCAATACCCTGTCTAAT+AGG | + | chr4.4:49191304-49191323 | MS.gene88238:intron | 40.0% | |
| AATGAAGAAGATAGGGAGGT+TGG | + | chr4.4:49190677-49190696 | MS.gene88238:CDS | 40.0% | |
| AATGGTGATCGTTTGAGCAA+TGG | + | chr4.4:49190019-49190038 | MS.gene88238:CDS | 40.0% | |
| ACAATTTGTCCTTGTCTAGG+GGG | + | chr4.4:49191833-49191852 | MS.gene88238:intron | 40.0% | |
| ACCAAAATCAGTGTCGTATC+CGG | - | chr4.4:49189778-49189797 | None:intergenic | 40.0% | |
| ACCATGACTGTATGGATAGA+GGG | - | chr4.4:49192711-49192730 | None:intergenic | 40.0% | |
| ATAGGAGGATACAAGGATAG+AGG | + | chr4.4:49192422-49192441 | MS.gene88238:intron | 40.0% | |
| ATCACGATAATAGAGCCCAA+TGG | - | chr4.4:49193030-49193049 | None:intergenic | 40.0% | |
| ATTGTTGCGCTCGTAAATGT+TGG | + | chr4.4:49193336-49193355 | MS.gene88238:CDS | 40.0% | |
| CAGATGAAAGAGCGAATAGA+AGG | - | chr4.4:49192754-49192773 | None:intergenic | 40.0% | |
| CGATAATTGCTAGGAACAGA+AGG | - | chr4.4:49192685-49192704 | None:intergenic | 40.0% | |
| CTAGCGCAAATGAAGAAGAT+AGG | + | chr4.4:49190669-49190688 | MS.gene88238:CDS | 40.0% | |
| CTAGCTGGGATTCTTTACAT+TGG | + | chr4.4:49192937-49192956 | MS.gene88238:CDS | 40.0% | |
| GAAAGTTTGATTCATGGTGG+GGG | + | chr4.4:49190211-49190230 | MS.gene88238:CDS | 40.0% | |
| GAAGGAAGATACAAGGATAG+AGG | + | chr4.4:49192331-49192350 | MS.gene88238:intron | 40.0% | |
| GAATTACCATTCTGCAAACC+AGG | + | chr4.4:49189680-49189699 | MS.gene88238:intron | 40.0% | |
| GAGGATGAATCAGATTACCA+GGG | - | chr4.4:49193719-49193738 | None:intergenic | 40.0% | |
| GATATCTCTTTGTACCCAAG+GGG | - | chr4.4:49193137-49193156 | None:intergenic | 40.0% | |
| GATGTCAGATACTACACTAG+AGG | - | chr4.4:49193604-49193623 | None:intergenic | 40.0% | |
| GCTTCTATTGTTGTAACCAG+TGG | + | chr4.4:49191332-49191351 | MS.gene88238:intron | 40.0% | |
| GGAAGCTGTTGAATCTCTTT+CGG | - | chr4.4:49193159-49193178 | None:intergenic | 40.0% | |
| GGAATCTTTGCAGAAATAGG+AGG | + | chr4.4:49192407-49192426 | MS.gene88238:intron | 40.0% | |
| GGATATCTCTTTGTACCCAA+GGG | - | chr4.4:49193138-49193157 | None:intergenic | 40.0% | |
| GGGGTTTAATTGGAACTACT+TGG | + | chr4.4:49189928-49189947 | MS.gene88238:intron | 40.0% | |
| GGTAATCTGATTCATCCTCA+TGG | + | chr4.4:49193720-49193739 | MS.gene88238:intron | 40.0% | |
| GTCTGTTCTTATGTATGGTG+TGG | + | chr4.4:49191048-49191067 | MS.gene88238:intron | 40.0% | |
| GTGAAGAGAATTGTTGACCT+GGG | - | chr4.4:49189562-49189581 | None:intergenic | 40.0% | |
| GTTATATCTACAGCGCGATT+TGG | - | chr4.4:49190325-49190344 | None:intergenic | 40.0% | |
| TAGGAGGATACAAGGATAGA+GGG | + | chr4.4:49192423-49192442 | MS.gene88238:intron | 40.0% | |
| TATCTGTGGAAGACCATGAA+TGG | + | chr4.4:49193376-49193395 | MS.gene88238:CDS | 40.0% | |
| TATTCCATGGCAAAGATACC+AGG | - | chr4.4:49191477-49191496 | None:intergenic | 40.0% | |
| TCACGATAATAGAGCCCAAT+GGG | - | chr4.4:49193029-49193048 | None:intergenic | 40.0% | |
| TCGATCCCATTACTTGCATT+CGG | + | chr4.4:49193072-49193091 | MS.gene88238:CDS | 40.0% | |
| TCTCTTGGAGAAGTTCTCAA+TGG | + | chr4.4:49190001-49190020 | MS.gene88238:CDS | 40.0% | |
| TGAGGATGAATCAGATTACC+AGG | - | chr4.4:49193720-49193739 | None:intergenic | 40.0% | |
| TGCAGAAATAGGAGGATACA+AGG | + | chr4.4:49192415-49192434 | MS.gene88238:intron | 40.0% | |
| TGGGATTCTTTACATTGGTC+CGG | + | chr4.4:49192942-49192961 | MS.gene88238:CDS | 40.0% | |
| TGGGGGACATCTGATAAAAT+TGG | - | chr4.4:49191798-49191817 | None:intergenic | 40.0% | |
| TTGTACAAGATAAGAGTGGG+TGG | + | chr4.4:49191090-49191109 | MS.gene88238:intron | 40.0% | |
| TTGTAGAGGAGGAAACTCTT+GGG | + | chr4.4:49192494-49192513 | MS.gene88238:intron | 40.0% | |
| ! | AATTGGGCTAGATGTACCTT+GGG | - | chr4.4:49192192-49192211 | None:intergenic | 40.0% |
| ! | AGAGTAGTTGGTTGGTTAGT+CGG | + | chr4.4:49191981-49192000 | MS.gene88238:intron | 40.0% |
| ! | ATACACTCTTCCTGGCATTT+TGG | + | chr4.4:49193287-49193306 | MS.gene88238:CDS | 40.0% |
| ! | ATTTTATCAGATGTCCCCCA+AGG | + | chr4.4:49191798-49191817 | MS.gene88238:intron | 40.0% |
| ! | CACTGGTCTGTTCTTATGTA+TGG | + | chr4.4:49191043-49191062 | MS.gene88238:intron | 40.0% |
| ! | CTGATCTTGTGGTTTTCTGT+AGG | + | chr4.4:49193660-49193679 | MS.gene88238:intron | 40.0% |
| ! | CTTCTAATAAAAGGCGTGTC+CGG | - | chr4.4:49189857-49189876 | None:intergenic | 40.0% |
| ! | GATCTTGTGGTTTTCTGTAG+GGG | + | chr4.4:49193662-49193681 | MS.gene88238:intron | 40.0% |
| ! | GGTGGTAGGATTTTTGCATA+AGG | + | chr4.4:49191108-49191127 | MS.gene88238:intron | 40.0% |
| ! | TCTGGAATGCCACAGAATTA+CGG | + | chr4.4:49190386-49190405 | MS.gene88238:CDS | 40.0% |
| ! | TGTTTTTCTCATGTCCCTTG+GGG | - | chr4.4:49191816-49191835 | None:intergenic | 40.0% |
| ! | TTCTGGCCTTTACTATCACT+TGG | - | chr4.4:49190994-49191013 | None:intergenic | 40.0% |
| ! | TTTTATCAGATGTCCCCCAA+GGG | + | chr4.4:49191799-49191818 | MS.gene88238:intron | 40.0% |
| !! | AGAAGAGTGTTAGTCTAGCT+GGG | + | chr4.4:49192923-49192942 | MS.gene88238:CDS | 40.0% |
| !! | AGAAGGAGAATGAGTTGATG+GGG | - | chr4.4:49189424-49189443 | None:intergenic | 40.0% |
| !! | AGGCATTGAAGGAAGATACA+AGG | + | chr4.4:49192324-49192343 | MS.gene88238:intron | 40.0% |
| !! | ATTTGAGGTTGATGCGGTAA+CGG | - | chr4.4:49189476-49189495 | None:intergenic | 40.0% |
| !! | CCAATTTGCTGAGAATGGAT+GGG | + | chr4.4:49192808-49192827 | MS.gene88238:CDS | 40.0% |
| !! | GAGAAGGAGAATGAGTTGAT+GGG | - | chr4.4:49189425-49189444 | None:intergenic | 40.0% |
| !! | GATGTGATTTGAGGTTGATG+CGG | - | chr4.4:49189482-49189501 | None:intergenic | 40.0% |
| !! | TTAGACAGGGTATTGGCTTA+TGG | - | chr4.4:49191303-49191322 | None:intergenic | 40.0% |
| !!! | GCTCTTTCATCTGTTTTTGC+TGG | + | chr4.4:49192761-49192780 | MS.gene88238:CDS | 40.0% |
| AATGGTGTTCTCCTGTACCA+AGG | - | chr4.4:49193180-49193199 | None:intergenic | 45.0% | |
| ACAAGATAAGAGTGGGTGGT+AGG | + | chr4.4:49191094-49191113 | MS.gene88238:intron | 45.0% | |
| ACCCTCTATCCATACAGTCA+TGG | + | chr4.4:49192707-49192726 | MS.gene88238:CDS | 45.0% | |
| AGGATACAAGGATAGAGGGA+AGG | + | chr4.4:49192427-49192446 | MS.gene88238:intron | 45.0% | |
| ATAGGAGGATACAAGGACTG+AGG | + | chr4.4:49192024-49192043 | MS.gene88238:intron | 45.0% | |
| ATATCTTACAGGGTCACAGC+TGG | + | chr4.4:49193000-49193019 | MS.gene88238:CDS | 45.0% | |
| ATCCCATTACTTGCATTCGG+GGG | + | chr4.4:49193075-49193094 | MS.gene88238:CDS | 45.0% | |
| CAAGTAACAAAGTCTGCCAC+TGG | - | chr4.4:49191351-49191370 | None:intergenic | 45.0% | |
| CACCATGACTGTATGGATAG+AGG | - | chr4.4:49192712-49192731 | None:intergenic | 45.0% | |
| CAGTGACTCTGTTGTAGAAG+GGG | + | chr4.4:49192083-49192102 | MS.gene88238:intron | 45.0% | |
| CATTCTCAGCAAATTGGCCA+TGG | - | chr4.4:49192805-49192824 | None:intergenic | 45.0% | |
| CCCATCCATTCTCAGCAAAT+TGG | - | chr4.4:49192811-49192830 | None:intergenic | 45.0% | |
| CGATCCCATTACTTGCATTC+GGG | + | chr4.4:49193073-49193092 | MS.gene88238:CDS | 45.0% | |
| CGCAAATGAAGAAGATAGGG+AGG | + | chr4.4:49190673-49190692 | MS.gene88238:CDS | 45.0% | |
| CGCACTGTAGCCAATAAAGA+AGG | - | chr4.4:49194210-49194229 | None:intergenic | 45.0% | |
| CGGATATCTCTTTGTACCCA+AGG | - | chr4.4:49193139-49193158 | None:intergenic | 45.0% | |
| CTAGACTAACACTCTTCTCC+TGG | - | chr4.4:49192921-49192940 | None:intergenic | 45.0% | |
| CTCTATCCATACAGTCATGG+TGG | + | chr4.4:49192710-49192729 | MS.gene88238:CDS | 45.0% | |
| CTTTCAACTTCTGTACTGCC+TGG | + | chr4.4:49191456-49191475 | MS.gene88238:intron | 45.0% | |
| GAAAAGAGAACACAGTGCAG+AGG | - | chr4.4:49193936-49193955 | None:intergenic | 45.0% | |
| GAATAGAAGGACAAGCCAAC+TGG | - | chr4.4:49192741-49192760 | None:intergenic | 45.0% | |
| GAATGGTGAAGATGAGGAGA+AGG | - | chr4.4:49189441-49189460 | None:intergenic | 45.0% | |
| GAGCGCAACAATCACAATGA+CGG | - | chr4.4:49193328-49193347 | None:intergenic | 45.0% | |
| GAGGCTTGAATACATCACCA+TGG | - | chr4.4:49190715-49190734 | None:intergenic | 45.0% | |
| GATCCCATTACTTGCATTCG+GGG | + | chr4.4:49193074-49193093 | MS.gene88238:CDS | 45.0% | |
| GCAAAAAATAAGGACGGGTG+CGG | - | chr4.4:49190740-49190759 | None:intergenic | 45.0% | |
| GCAGTGACTCTGTTGTAGAA+GGG | + | chr4.4:49192082-49192101 | MS.gene88238:intron | 45.0% | |
| GGTGAAGAGAATTGTTGACC+TGG | - | chr4.4:49189563-49189582 | None:intergenic | 45.0% | |
| GTTGACCTGGGATTGTTGAA+GGG | - | chr4.4:49189550-49189569 | None:intergenic | 45.0% | |
| GTTGGTTGGAAGTCAATCCA+TGG | + | chr4.4:49190695-49190714 | MS.gene88238:CDS | 45.0% | |
| GTTGTAGAAGGGGAAATCCT+TGG | + | chr4.4:49192093-49192112 | MS.gene88238:intron | 45.0% | |
| GTTGTAGAGGAGGAAACTCT+TGG | + | chr4.4:49192493-49192512 | MS.gene88238:intron | 45.0% | |
| TACTCAACAGCATCCTTCCA+TGG | + | chr4.4:49192785-49192804 | MS.gene88238:CDS | 45.0% | |
| TACTTCTCCTGAGATCAGGA+GGG | - | chr4.4:49193694-49193713 | None:intergenic | 45.0% | |
| TAGCGTACACCTGGTGTAAT+TGG | - | chr4.4:49193248-49193267 | None:intergenic | 45.0% | |
| TAGGAGGATACAAGGACTGA+GGG | + | chr4.4:49192025-49192044 | MS.gene88238:intron | 45.0% | |
| TCGGGGGAGTAATTGGATAT+CGG | + | chr4.4:49193091-49193110 | MS.gene88238:CDS | 45.0% | |
| TCGGTTTAGGTCCAAGTTTC+AGG | + | chr4.4:49193110-49193129 | MS.gene88238:CDS | 45.0% | |
| TCTGTCTTGACTATGACTCC+AGG | + | chr4.4:49192900-49192919 | MS.gene88238:intron | 45.0% | |
| TGAAGCACAGACACATACAC+CGG | + | chr4.4:49189756-49189775 | MS.gene88238:intron | 45.0% | |
| TGTAGAGGAGGAAACTCTTG+GGG | + | chr4.4:49192495-49192514 | MS.gene88238:intron | 45.0% | |
| TGTTGACCTGGGATTGTTGA+AGG | - | chr4.4:49189551-49189570 | None:intergenic | 45.0% | |
| TTACTTCTCCTGAGATCAGG+AGG | - | chr4.4:49193695-49193714 | None:intergenic | 45.0% | |
| TTATCATTGCCCCCTAGACA+AGG | - | chr4.4:49191759-49191778 | None:intergenic | 45.0% | |
| TTCAACAGCTTCCTTGGTAC+AGG | + | chr4.4:49193166-49193185 | MS.gene88238:CDS | 45.0% | |
| ! | AACTGACCTGGTTTGCAGAA+TGG | - | chr4.4:49189689-49189708 | None:intergenic | 45.0% |
| ! | AAGAAGATAGGGAGGTTGGT+TGG | + | chr4.4:49190681-49190700 | MS.gene88238:CDS | 45.0% |
| ! | AGAAAAGTGCAGATCGAAGG+GGG | + | chr4.4:49192272-49192291 | MS.gene88238:intron | 45.0% |
| ! | AGCAGAAAAGTGCAGATCGA+AGG | + | chr4.4:49192269-49192288 | MS.gene88238:intron | 45.0% |
| ! | CAGAAAAGTGCAGATCGAAG+GGG | + | chr4.4:49192271-49192290 | MS.gene88238:intron | 45.0% |
| ! | GAATTGGGCTAGATGTACCT+TGG | - | chr4.4:49192193-49192212 | None:intergenic | 45.0% |
| ! | GCAGAAAAGTGCAGATCGAA+GGG | + | chr4.4:49192270-49192289 | MS.gene88238:intron | 45.0% |
| ! | GGAGAAGGAGAATGAGTTGA+TGG | - | chr4.4:49189426-49189445 | None:intergenic | 45.0% |
| ! | GTTTTTCTCATGTCCCTTGG+GGG | - | chr4.4:49191815-49191834 | None:intergenic | 45.0% |
| ! | TAGAGCAGGTGGTTAGTTAC+AGG | + | chr4.4:49192386-49192405 | MS.gene88238:intron | 45.0% |
| !! | AAGTGCTGTGGAAAAGTGCT+GGG | + | chr4.4:49192232-49192251 | MS.gene88238:intron | 45.0% |
| !! | AGAGGGTACCGATAATTGCT+AGG | - | chr4.4:49192694-49192713 | None:intergenic | 45.0% |
| !! | CATGGCCAATTTGCTGAGAA+TGG | + | chr4.4:49192803-49192822 | MS.gene88238:CDS | 45.0% |
| !! | GAGAAGAGTGTTAGTCTAGC+TGG | + | chr4.4:49192922-49192941 | MS.gene88238:CDS | 45.0% |
| !! | GCCAATTTGCTGAGAATGGA+TGG | + | chr4.4:49192807-49192826 | MS.gene88238:CDS | 45.0% |
| !! | TGGTTTTTGCTCAAGTGCTG+TGG | + | chr4.4:49192220-49192239 | MS.gene88238:intron | 45.0% |
| !! | TTCCATTTTGGGGGTTCGTT+GGG | + | chr4.4:49190176-49190195 | MS.gene88238:CDS | 45.0% |
| !!! | ACCGGATACGACACTGATTT+TGG | + | chr4.4:49189774-49189793 | MS.gene88238:intron | 45.0% |
| !!! | GTGGAAAAGTGCTGGGTTTT+TGG | + | chr4.4:49192239-49192258 | MS.gene88238:intron | 45.0% |
| AAAAATAAGGACGGGTGCGG+AGG | - | chr4.4:49190737-49190756 | None:intergenic | 50.0% | |
| ACACAGTGCAGAGGTCAACA+AGG | - | chr4.4:49193927-49193946 | None:intergenic | 50.0% | |
| ACTCCCCCGAATGCAAGTAA+TGG | - | chr4.4:49193081-49193100 | None:intergenic | 50.0% | |
| ACTGCCTGGTATCTTTGCCA+TGG | + | chr4.4:49191470-49191489 | MS.gene88238:intron | 50.0% | |
| AGACAAGGACGACACGCAAT+TGG | - | chr4.4:49191744-49191763 | None:intergenic | 50.0% | |
| AGTTCATTGGGCCTAACCCA+AGG | + | chr4.4:49192173-49192192 | MS.gene88238:intron | 50.0% | |
| ATCTCAGGAGAAGTAAGCCC+TGG | + | chr4.4:49193699-49193718 | MS.gene88238:intron | 50.0% | |
| ATGTGTCACATGTCGGACAC+CGG | + | chr4.4:49189835-49189854 | MS.gene88238:intron | 50.0% | |
| ATTGCGTGTCGTCCTTGTCT+AGG | + | chr4.4:49191744-49191763 | MS.gene88238:intron | 50.0% | |
| CATACCTCCACCACCATTCA+TGG | - | chr4.4:49193392-49193411 | None:intergenic | 50.0% | |
| CGCAGTGACTCTGTTGTAGA+AGG | + | chr4.4:49192081-49192100 | MS.gene88238:intron | 50.0% | |
| CTCAGCAAATTGGCCATGGA+AGG | - | chr4.4:49192801-49192820 | None:intergenic | 50.0% | |
| CTCCCCCGAATGCAAGTAAT+GGG | - | chr4.4:49193080-49193099 | None:intergenic | 50.0% | |
| CTGTGGAAGACCATGAATGG+TGG | + | chr4.4:49193379-49193398 | MS.gene88238:CDS | 50.0% | |
| CTTGCATTCGGGGGAGTAAT+TGG | + | chr4.4:49193084-49193103 | MS.gene88238:CDS | 50.0% | |
| GAAGGGGAAATCCTTGGAGT+TGG | + | chr4.4:49192099-49192118 | MS.gene88238:intron | 50.0% | |
| GACAAGGACGACACGCAATT+GGG | - | chr4.4:49191743-49191762 | None:intergenic | 50.0% | |
| GAGAGTCCACCATGACTGTA+TGG | - | chr4.4:49192719-49192738 | None:intergenic | 50.0% | |
| GCAGTGTGACTCTGTTGTAG+AGG | + | chr4.4:49192480-49192499 | MS.gene88238:intron | 50.0% | |
| GGCTAGATGTACCTTGGGTT+AGG | - | chr4.4:49192187-49192206 | None:intergenic | 50.0% | |
| GGCTTACTTCTCCTGAGATC+AGG | - | chr4.4:49193698-49193717 | None:intergenic | 50.0% | |
| GGGTTAGGCCCAATGAACTT+TGG | - | chr4.4:49192172-49192191 | None:intergenic | 50.0% | |
| GTCTTAACCCTCCTGATCTC+AGG | + | chr4.4:49193684-49193703 | MS.gene88238:intron | 50.0% | |
| GTGTGACTCTGTTGTAGAGG+AGG | + | chr4.4:49192483-49192502 | MS.gene88238:intron | 50.0% | |
| TAGGTCCCTTCAACAATCCC+AGG | + | chr4.4:49189542-49189561 | MS.gene88238:intron | 50.0% | |
| TCCAGCAGATACCAACTCCA+AGG | - | chr4.4:49192113-49192132 | None:intergenic | 50.0% | |
| TCTGCTGGAGTCGAGAACAA+AGG | + | chr4.4:49192124-49192143 | MS.gene88238:intron | 50.0% | |
| TGGAAGACCATGAATGGTGG+TGG | + | chr4.4:49193382-49193401 | MS.gene88238:CDS | 50.0% | |
| TTCCCAACGAACCCCCAAAA+TGG | - | chr4.4:49190181-49190200 | None:intergenic | 50.0% | |
| TTGCGTGTCGTCCTTGTCTA+GGG | + | chr4.4:49191745-49191764 | MS.gene88238:intron | 50.0% | |
| ! | ACCAGGTGTACGCTAGTTTG+TGG | + | chr4.4:49193253-49193272 | MS.gene88238:CDS | 50.0% |
| ! | AGTTTGATTCATGGTGGGGG+AGG | + | chr4.4:49190214-49190233 | MS.gene88238:CDS | 50.0% |
| ! | CAAGTGCTGTGGAAAAGTGC+TGG | + | chr4.4:49192231-49192250 | MS.gene88238:intron | 50.0% |
| ! | CAGGTGTACGCTAGTTTGTG+GGG | + | chr4.4:49193255-49193274 | MS.gene88238:CDS | 50.0% |
| ! | CCAGGTGTACGCTAGTTTGT+GGG | + | chr4.4:49193254-49193273 | MS.gene88238:CDS | 50.0% |
| ! | TCCAAGTTTCAGGTCCCCTT+GGG | + | chr4.4:49193120-49193139 | MS.gene88238:CDS | 50.0% |
| ! | TTGGTTGGTTAGTCGGTCAG+AGG | + | chr4.4:49191988-49192007 | MS.gene88238:intron | 50.0% |
| !! | AAGACCATGAATGGTGGTGG+AGG | + | chr4.4:49193385-49193404 | MS.gene88238:CDS | 50.0% |
| !! | CTTCCATTTTGGGGGTTCGT+TGG | + | chr4.4:49190175-49190194 | MS.gene88238:CDS | 50.0% |
| !! | TCCTTGGAGTTGGTATCTGC+TGG | + | chr4.4:49192109-49192128 | MS.gene88238:intron | 50.0% |
| ACCCAAGGGGACCTGAAACT+TGG | - | chr4.4:49193124-49193143 | None:intergenic | 55.0% | |
| AGTGTCGCAGCCAAAATGCC+AGG | - | chr4.4:49193300-49193319 | None:intergenic | 55.0% | |
| CCCACAAACTAGCGTACACC+TGG | - | chr4.4:49193257-49193276 | None:intergenic | 55.0% | |
| GAGGAAACTCTTGGGGTTGG+AGG | + | chr4.4:49192502-49192521 | MS.gene88238:intron | 55.0% | |
| GAGGAGGAAACTCTTGGGGT+TGG | + | chr4.4:49192499-49192518 | MS.gene88238:intron | 55.0% | |
| GTCACAGCTGGACTCCCATT+GGG | + | chr4.4:49193012-49193031 | MS.gene88238:CDS | 55.0% | |
| GTGTGCAGATCTGTGCTGTG+TGG | + | chr4.4:49194104-49194123 | MS.gene88238:intron | 55.0% | |
| TGCAGATCTGTGCTGTGTGG+TGG | + | chr4.4:49194107-49194126 | MS.gene88238:intron | 55.0% | |
| TGCGTGTCGTCCTTGTCTAG+GGG | + | chr4.4:49191746-49191765 | MS.gene88238:intron | 55.0% | |
| ! | GTCCAAGTTTCAGGTCCCCT+TGG | + | chr4.4:49193119-49193138 | MS.gene88238:CDS | 55.0% |
| !! | GGATCGAGGGAAGGCATTGA+AGG | + | chr4.4:49192313-49192332 | MS.gene88238:intron | 55.0% |
| !! | GTCATGGTGGACTCTCCAGT+TGG | + | chr4.4:49192723-49192742 | MS.gene88238:CDS | 55.0% |
| AATAAGGACGGGTGCGGAGG+AGG | - | chr4.4:49190734-49190753 | None:intergenic | 60.0% | |
| GCGTGTCGTCCTTGTCTAGG+GGG | + | chr4.4:49191747-49191766 | MS.gene88238:intron | 60.0% | |
| GGTCACAGCTGGACTCCCAT+TGG | + | chr4.4:49193011-49193030 | MS.gene88238:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 49189412 | 49194328 | 49189412 | ID=MS.gene88238 |
| chr4.4 | mRNA | 49189412 | 49194328 | 49189412 | ID=MS.gene88238.t1;Parent=MS.gene88238 |
| chr4.4 | exon | 49189412 | 49189544 | 49189412 | ID=MS.gene88238.t1.exon1;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49189412 | 49189544 | 49189412 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| chr4.4 | exon | 49189978 | 49190566 | 49189978 | ID=MS.gene88238.t1.exon2;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49189978 | 49190566 | 49189978 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| chr4.4 | exon | 49190664 | 49190792 | 49190664 | ID=MS.gene88238.t1.exon3;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49190664 | 49190792 | 49190664 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| chr4.4 | exon | 49192673 | 49192829 | 49192673 | ID=MS.gene88238.t1.exon4;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49192673 | 49192829 | 49192673 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| chr4.4 | exon | 49192922 | 49193406 | 49192922 | ID=MS.gene88238.t1.exon5;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49192922 | 49193406 | 49192922 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| chr4.4 | exon | 49194112 | 49194328 | 49194112 | ID=MS.gene88238.t1.exon6;Parent=MS.gene88238.t1 |
| chr4.4 | CDS | 49194112 | 49194328 | 49194112 | ID=cds.MS.gene88238.t1;Parent=MS.gene88238.t1 |
| Gene Sequence |
| Protein sequence |
