Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88804.t1 | XP_003615675.1 | 95.6 | 362 | 16 | 0 | 1 | 362 | 1 | 362 | 1.70E-187 | 665.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88804.t1 | F4IQJ2 | 50.3 | 380 | 165 | 7 | 1 | 362 | 1 | 374 | 1.2e-85 | 318.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88804.t1 | G7KE89 | 95.6 | 362 | 16 | 0 | 1 | 362 | 1 | 362 | 1.2e-187 | 665.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene88804 | 0.807466 | 4.99E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene88804 | 0.817083 | 3.96E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene88804 | 0.804187 | 2.44E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88804.t1 | MTR_5g070860 | 95.429 | 350 | 16 | 0 | 1 | 350 | 1 | 350 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88804.t1 | AT2G18410 | 50.678 | 369 | 156 | 7 | 1 | 350 | 1 | 362 | 1.12e-112 | 333 |
| MS.gene88804.t1 | AT2G18410 | 47.782 | 293 | 132 | 6 | 1 | 279 | 1 | 286 | 3.26e-79 | 245 |
Find 74 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCAAATTTCAAGTATATT+TGG | 0.165288 | 5.4:+55466810 | MS.gene88804:intron |
| TTCTTCCGAGAACTCCTTAT+TGG | 0.193034 | 5.4:+55466923 | MS.gene88804:CDS |
| TTCTCATCGTTTCGCTTTCT+CGG | 0.238411 | 5.4:+55463617 | MS.gene88804:CDS |
| CCTCACTGCTGCTCTCTTCA+AGG | 0.319817 | 5.4:-55467968 | None:intergenic |
| ACGTTGCAGGATTCATGTTT+TGG | 0.323737 | 5.4:+55465040 | MS.gene88804:intron |
| CATATACTTGCAGGTTTAGT+TGG | 0.338834 | 5.4:+55465319 | MS.gene88804:intron |
| CATATATCTAAATCATCATC+TGG | 0.349360 | 5.4:-55468089 | None:intergenic |
| TTGTAGTAGCAAGTGAAATT+TGG | 0.362698 | 5.4:-55465133 | None:intergenic |
| TTATAAATCAGTCAAGGATA+TGG | 0.367636 | 5.4:+55465157 | MS.gene88804:CDS |
| CAATGGTATTACCGAGTCTA+TGG | 0.368131 | 5.4:-55465368 | None:intergenic |
| GAAGATGGAACAACCGTTGC+AGG | 0.375116 | 5.4:+55467154 | MS.gene88804:CDS |
| GCAGTATGTGAGTGAGATTT+TGG | 0.375270 | 5.4:-55463592 | None:intergenic |
| ATCTTTCTTCTTCTAGCAAA+TGG | 0.375882 | 5.4:+55463683 | MS.gene88804:CDS |
| CGGAGAAGGAGCAAGTTGAT+AGG | 0.401470 | 5.4:+55467790 | MS.gene88804:CDS |
| GGCTACGCAGATTGCTTAGA+AGG | 0.401578 | 5.4:-55466579 | None:intergenic |
| GTCAGACTCAAACGCAGAAA+TGG | 0.412350 | 5.4:+55466975 | MS.gene88804:CDS |
| TCTGGGTCTTCATCAGAATC+TGG | 0.427379 | 5.4:-55468071 | None:intergenic |
| AAGGGTAAGACAAGGAAATC+TGG | 0.430423 | 5.4:+55465089 | MS.gene88804:CDS |
| GAAAAGTTTAAAGTTGAAGC+AGG | 0.437344 | 5.4:+55467103 | MS.gene88804:CDS |
| ACTTCTGCTTCAGCAGAAGA+TGG | 0.442521 | 5.4:+55467139 | MS.gene88804:CDS |
| TTACGCGACGGCGCGTTAGA+AGG | 0.442752 | 5.4:+55463478 | MS.gene88804:CDS |
| ACCTATTTCAAAGGGTAAAA+CGG | 0.446678 | 5.4:+55467995 | MS.gene88804:CDS |
| TTCTAACGCGCCGTCGCGTA+AGG | 0.450290 | 5.4:-55463476 | None:intergenic |
| ATCATACCTTGGTGTTCAAA+AGG | 0.453627 | 5.4:-55467828 | None:intergenic |
| GATTGTTATACAGATCCTCT+TGG | 0.456861 | 5.4:+55465062 | MS.gene88804:CDS |
| TTTCTCCAATAAGGAGTTCT+CGG | 0.461886 | 5.4:-55466928 | None:intergenic |
| AGTGTCTTTGATAGTGAGAG+TGG | 0.476958 | 5.4:-55463512 | None:intergenic |
| CTACCATCATAAATTTGAAT+CGG | 0.477609 | 5.4:-55467939 | None:intergenic |
| CTTGAAGAGAGCAGCAGTGA+GGG | 0.479698 | 5.4:+55467969 | MS.gene88804:CDS |
| CTTGCTCCTTCTCCGACAGC+TGG | 0.481450 | 5.4:-55467782 | None:intergenic |
| CTCACTGCTGCTCTCTTCAA+GGG | 0.486177 | 5.4:-55467967 | None:intergenic |
| GCACCGATTCAAATTTATGA+TGG | 0.500504 | 5.4:+55467936 | MS.gene88804:CDS |
| GCGATTACTGAATTGGGAAG+AGG | 0.503963 | 5.4:+55465194 | MS.gene88804:CDS |
| TACAGATCCTCTTGGTTGGA+AGG | 0.505892 | 5.4:+55465070 | MS.gene88804:CDS |
| TTGAAGAGAGCAGCAGTGAG+GGG | 0.511953 | 5.4:+55467970 | MS.gene88804:CDS |
| CAATCTCCAGCTGTCGGAGA+AGG | 0.518414 | 5.4:+55467776 | MS.gene88804:CDS |
| TTCTGACCTTCATGAGGAGA+GGG | 0.523680 | 5.4:+55466842 | MS.gene88804:CDS |
| GTTATACAGATCCTCTTGGT+TGG | 0.526377 | 5.4:+55465066 | MS.gene88804:CDS |
| GCAAGTGAAATTTGGTCAGA+AGG | 0.527173 | 5.4:-55465125 | None:intergenic |
| GCATCTTTGCAGTCAGTCGC+AGG | 0.541954 | 5.4:+55466556 | MS.gene88804:CDS |
| AATGTGAGAGAAAACGTTGA+AGG | 0.547299 | 5.4:-55463551 | None:intergenic |
| CTGCAGCCCTCTCCTCATGA+AGG | 0.549659 | 5.4:-55466848 | None:intergenic |
| GAAAATATATAATCTCACCT+AGG | 0.551369 | 5.4:-55468028 | None:intergenic |
| AAAATATATAATCTCACCTA+GGG | 0.558090 | 5.4:-55468027 | None:intergenic |
| ACAGATCCTCTTGGTTGGAA+GGG | 0.558800 | 5.4:+55465071 | MS.gene88804:CDS |
| GGAGAAGGAGCAAGTTGATA+GGG | 0.569101 | 5.4:+55467791 | MS.gene88804:CDS |
| GTGTCTTTGATAGTGAGAGT+GGG | 0.577637 | 5.4:-55463511 | None:intergenic |
| TCTTGAGTACATGTCCTCCA+TGG | 0.578101 | 5.4:+55466875 | MS.gene88804:CDS |
| TGAAGAGAGCAGCAGTGAGG+GGG | 0.579393 | 5.4:+55467971 | MS.gene88804:CDS |
| CTAAGCAATCTGCGTAGCCA+TGG | 0.584264 | 5.4:+55466583 | MS.gene88804:CDS |
| CGTTTGTGTTGCCATAGACT+CGG | 0.590273 | 5.4:+55465357 | MS.gene88804:CDS |
| AAGTTTAAAGTTGAAGCAGG+AGG | 0.591459 | 5.4:+55467106 | MS.gene88804:CDS |
| AAAACGGAGGACTCAGCCCT+AGG | 0.592196 | 5.4:+55468011 | MS.gene88804:CDS |
| ATTCTGACCTTCATGAGGAG+AGG | 0.594867 | 5.4:+55466841 | MS.gene88804:CDS |
| ATATATCTAAATCATCATCT+GGG | 0.597804 | 5.4:-55468088 | None:intergenic |
| GTCTTACCCTTCCAACCAAG+AGG | 0.598767 | 5.4:-55465077 | None:intergenic |
| GGAGCAAGTTGATAGGGCAA+AGG | 0.602173 | 5.4:+55467797 | MS.gene88804:CDS |
| TACAACTTATAAATCAGTCA+AGG | 0.606201 | 5.4:+55465151 | MS.gene88804:CDS |
| ACAATTCAATCTCCAGCTGT+CGG | 0.612927 | 5.4:+55467770 | MS.gene88804:CDS |
| ATTGCATTCTGACCTTCATG+AGG | 0.614181 | 5.4:+55466836 | MS.gene88804:CDS |
| GAGAAAACGTTGAAGGCGAA+AGG | 0.615791 | 5.4:-55463544 | None:intergenic |
| TGATTCTACACTAGCCACCA+TGG | 0.622429 | 5.4:-55466892 | None:intergenic |
| TGAGTACATGTCCTCCATGG+TGG | 0.628826 | 5.4:+55466878 | MS.gene88804:CDS |
| CGTTGCAGGCTTACTGCCGA+AGG | 0.634937 | 5.4:+55467168 | MS.gene88804:CDS |
| CTTCGGCAGTAAGCCTGCAA+CGG | 0.639094 | 5.4:-55467167 | None:intergenic |
| ATTTGCAGATCCTTACGCGA+CGG | 0.643811 | 5.4:+55463466 | MS.gene88804:CDS |
| AAATGGACGAGTTAGAGTGA+CGG | 0.646988 | 5.4:+55466992 | MS.gene88804:CDS |
| CCTTGAAGAGAGCAGCAGTG+AGG | 0.653081 | 5.4:+55467968 | MS.gene88804:CDS |
| AAGAAATGAGCATAGAACGA+GGG | 0.672388 | 5.4:-55463643 | None:intergenic |
| GAAGAAATGAGCATAGAACG+AGG | 0.690113 | 5.4:-55463644 | None:intergenic |
| TTGGTTGGAAGGGTAAGACA+AGG | 0.697722 | 5.4:+55465081 | MS.gene88804:CDS |
| AGTCTATGGCAACACAAACG+CGG | 0.706339 | 5.4:-55465354 | None:intergenic |
| TATTTCAAAGGGTAAAACGG+AGG | 0.732486 | 5.4:+55467998 | MS.gene88804:CDS |
| TTCTACACTAGCCACCATGG+AGG | 0.784181 | 5.4:-55466889 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTGAAAAGAATTTT+AGG | + | chr5.4:55464800-55464819 | MS.gene88804:intron | 10.0% |
| !!! | TATTTTTGAAAAGAATTTTA+GGG | + | chr5.4:55464801-55464820 | MS.gene88804:intron | 10.0% |
| !! | ATACTTAATTGGAATATTAA+TGG | - | chr5.4:55466436-55466455 | None:intergenic | 15.0% |
| !! | ATATCTTTATAATCACTTAA+TGG | - | chr5.4:55466230-55466249 | None:intergenic | 15.0% |
| !! | TAAAGTATAAAAGAGTTTAA+TGG | - | chr5.4:55464982-55465001 | None:intergenic | 15.0% |
| !! | TTCTATAATATCTTTGTAAT+TGG | + | chr5.4:55466022-55466041 | MS.gene88804:intron | 15.0% |
| !! | TTTACTCTTATTATCTTAAT+CGG | - | chr5.4:55464023-55464042 | None:intergenic | 15.0% |
| !!! | AAATTTAGGATTTTAAATTG+TGG | + | chr5.4:55467349-55467368 | MS.gene88804:intron | 15.0% |
| !!! | AATTTAGGATTTTAAATTGT+GGG | + | chr5.4:55467350-55467369 | MS.gene88804:intron | 15.0% |
| !!! | TGAAACTTTATGTTTTTAAT+AGG | + | chr5.4:55467746-55467765 | MS.gene88804:intron | 15.0% |
| !!! | TTTTATAAATTTTGCGAAAA+AGG | + | chr5.4:55465795-55465814 | MS.gene88804:intron | 15.0% |
| !! | AAAATATATAATCTCACCTA+GGG | - | chr5.4:55468030-55468049 | None:intergenic | 20.0% |
| !! | AACAAAAATAAGATCTCTTT+AGG | - | chr5.4:55467208-55467227 | None:intergenic | 20.0% |
| !! | AATGATTTACATTCTATAGT+TGG | + | chr5.4:55466117-55466136 | MS.gene88804:intron | 20.0% |
| !! | ACAAAGATATTATAGAACTT+CGG | - | chr5.4:55466019-55466038 | None:intergenic | 20.0% |
| !! | ACTATAGAATGTAAATCATT+TGG | - | chr5.4:55466117-55466136 | None:intergenic | 20.0% |
| !! | AGTAGATAATATTTATGTCA+CGG | + | chr5.4:55466732-55466751 | MS.gene88804:intron | 20.0% |
| !! | ATAAAAAGATTACTGTATCA+AGG | - | chr5.4:55465577-55465596 | None:intergenic | 20.0% |
| !! | ATATATCTAAATCATCATCT+GGG | - | chr5.4:55468091-55468110 | None:intergenic | 20.0% |
| !! | ATATTCCAATTAAGTATGTT+CGG | + | chr5.4:55466439-55466458 | MS.gene88804:intron | 20.0% |
| !! | ATCTTGTTACAATTTAATGA+TGG | + | chr5.4:55466248-55466267 | MS.gene88804:intron | 20.0% |
| !! | GATTATGAAAATTGTAAGAA+GGG | + | chr5.4:55465514-55465533 | MS.gene88804:intron | 20.0% |
| !! | TAACTTCTTCTTTATATTTC+TGG | + | chr5.4:55463723-55463742 | MS.gene88804:intron | 20.0% |
| !! | TATTATCTTAATCGGAAAAA+AGG | - | chr5.4:55464015-55464034 | None:intergenic | 20.0% |
| !! | TGATTATGAAAATTGTAAGA+AGG | + | chr5.4:55465513-55465532 | MS.gene88804:intron | 20.0% |
| !! | TGTAAAAGAAAGCAAAAATA+TGG | - | chr5.4:55465282-55465301 | None:intergenic | 20.0% |
| !! | TTCAACCTATTATTTATTTG+CGG | - | chr5.4:55467730-55467749 | None:intergenic | 20.0% |
| !!! | AAATACTTTTTTATGATGAG+AGG | - | chr5.4:55465677-55465696 | None:intergenic | 20.0% |
| !!! | ACAAAATAATGGATTCATAT+TGG | - | chr5.4:55464848-55464867 | None:intergenic | 20.0% |
| !!! | ATTCAAAGGTATTTTTTCTA+AGG | + | chr5.4:55467257-55467276 | MS.gene88804:intron | 20.0% |
| !!! | ATTTGCTCTTATTTTGAATA+CGG | + | chr5.4:55466607-55466626 | MS.gene88804:intron | 20.0% |
| !!! | CATCATAAAAAAGTATTTTG+TGG | + | chr5.4:55465679-55465698 | MS.gene88804:intron | 20.0% |
| !!! | GATCAAATTTCAAGTATATT+TGG | + | chr5.4:55466810-55466829 | MS.gene88804:intron | 20.0% |
| !!! | TCTTTTTCTTTTTTGACAAA+GGG | - | chr5.4:55466335-55466354 | None:intergenic | 20.0% |
| !!! | TGTTATATGTAATTTGCAAT+TGG | + | chr5.4:55467488-55467507 | MS.gene88804:intron | 20.0% |
| !!! | TTCTTTTTCTTTTTTGACAA+AGG | - | chr5.4:55466336-55466355 | None:intergenic | 20.0% |
| ! | AAAAATGGAACCAATACAAA+AGG | - | chr5.4:55464626-55464645 | None:intergenic | 25.0% |
| ! | AAAATGGAACCAATACAAAA+GGG | - | chr5.4:55464625-55464644 | None:intergenic | 25.0% |
| ! | AAAGATATTATAGAACTTCG+GGG | - | chr5.4:55466017-55466036 | None:intergenic | 25.0% |
| ! | AAGCTGTTATCTAATTCAAA+GGG | + | chr5.4:55464535-55464554 | MS.gene88804:intron | 25.0% |
| ! | AATATTATTAACGACAAGCT+CGG | - | chr5.4:55464674-55464693 | None:intergenic | 25.0% |
| ! | AATGAACCTATAACATATAG+CGG | + | chr5.4:55464235-55464254 | MS.gene88804:intron | 25.0% |
| ! | AATTGTAAATCTTCTTTCTC+AGG | - | chr5.4:55466403-55466422 | None:intergenic | 25.0% |
| ! | ATATCCAAAAAGAATCCATT+AGG | - | chr5.4:55466509-55466528 | None:intergenic | 25.0% |
| ! | ATTGACCGCAAATAAATAAT+AGG | + | chr5.4:55467722-55467741 | MS.gene88804:intron | 25.0% |
| ! | CAAAGATATTATAGAACTTC+GGG | - | chr5.4:55466018-55466037 | None:intergenic | 25.0% |
| ! | CAAATAACCATTTGAAAAGT+GGG | - | chr5.4:55464878-55464897 | None:intergenic | 25.0% |
| ! | CATATATCTAAATCATCATC+TGG | - | chr5.4:55468092-55468111 | None:intergenic | 25.0% |
| ! | CTACCATCATAAATTTGAAT+CGG | - | chr5.4:55467942-55467961 | None:intergenic | 25.0% |
| ! | GAAAATATATAATCTCACCT+AGG | - | chr5.4:55468031-55468050 | None:intergenic | 25.0% |
| ! | GAAATGAAAATTTAGATGCT+AGG | + | chr5.4:55467279-55467298 | MS.gene88804:intron | 25.0% |
| ! | GAAATTGAATTTGTAGTGTT+TGG | + | chr5.4:55463895-55463914 | MS.gene88804:intron | 25.0% |
| ! | GTAGATAATATTTATGTCAC+GGG | + | chr5.4:55466733-55466752 | MS.gene88804:intron | 25.0% |
| ! | GTGCTTCTAACATTAAATTT+AGG | + | chr5.4:55467335-55467354 | MS.gene88804:intron | 25.0% |
| ! | TACAAATCTATATCATACCT+TGG | - | chr5.4:55467842-55467861 | None:intergenic | 25.0% |
| ! | TACAACTTATAAATCAGTCA+AGG | + | chr5.4:55465151-55465170 | MS.gene88804:CDS | 25.0% |
| ! | TATATAAGCTCAAATGTTAC+TGG | + | chr5.4:55464064-55464083 | MS.gene88804:intron | 25.0% |
| ! | TTATAAATCAGTCAAGGATA+TGG | + | chr5.4:55465157-55465176 | MS.gene88804:CDS | 25.0% |
| ! | TTTGCAATTAATATGGTGAT+TGG | + | chr5.4:55465459-55465478 | MS.gene88804:intron | 25.0% |
| !! | ACAATTAGCTATTTGTTACA+AGG | - | chr5.4:55464162-55464181 | None:intergenic | 25.0% |
| !! | TAGCAAATAACTGATAATGT+TGG | + | chr5.4:55463873-55463892 | MS.gene88804:intron | 25.0% |
| !! | TATAAATTTTGCGAAAAAGG+TGG | + | chr5.4:55465798-55465817 | MS.gene88804:intron | 25.0% |
| !! | TATAAGATTGAATGCGTTTT+TGG | + | chr5.4:55464718-55464737 | MS.gene88804:intron | 25.0% |
| !! | TCTGACATTAAATTTTCCTT+GGG | - | chr5.4:55466961-55466980 | None:intergenic | 25.0% |
| !! | TTACAATTTAATGATGGAAC+TGG | + | chr5.4:55466254-55466273 | MS.gene88804:intron | 25.0% |
| !! | TTCTAGTGTAAAAGGAATTT+TGG | - | chr5.4:55466378-55466397 | None:intergenic | 25.0% |
| !! | TTGTCATTTGTGATAGAATT+GGG | + | chr5.4:55465974-55465993 | MS.gene88804:intron | 25.0% |
| !! | TTTCAATCAAAGCATCAAAT+AGG | - | chr5.4:55467309-55467328 | None:intergenic | 25.0% |
| !! | TTTCATTTTCAATGTGAATC+TGG | + | chr5.4:55463780-55463799 | MS.gene88804:intron | 25.0% |
| !! | TTTTCAATTCATATACTTGC+AGG | + | chr5.4:55465310-55465329 | MS.gene88804:intron | 25.0% |
| !!! | ATTCTAGTCAATGTTTTTTG+TGG | + | chr5.4:55465435-55465454 | MS.gene88804:intron | 25.0% |
| !!! | CAAGGTTATTTTATTTAGCT+TGG | - | chr5.4:55465559-55465578 | None:intergenic | 25.0% |
| !!! | CTTTTATTTCTTTTGGTTGT+TGG | + | chr5.4:55464574-55464593 | MS.gene88804:intron | 25.0% |
| !!! | TAATCCTAATGGATTCTTTT+TGG | + | chr5.4:55466502-55466521 | MS.gene88804:intron | 25.0% |
| AAAAAACTGGTAAGTATGGT+TGG | + | chr5.4:55466157-55466176 | MS.gene88804:intron | 30.0% | |
| AAAAGGAGAATCCATAACTA+AGG | - | chr5.4:55464503-55464522 | None:intergenic | 30.0% | |
| AAGATATTATAGAACTTCGG+GGG | - | chr5.4:55466016-55466035 | None:intergenic | 30.0% | |
| ACCTATTTCAAAGGGTAAAA+CGG | + | chr5.4:55467995-55468014 | MS.gene88804:CDS | 30.0% | |
| ACTAGCTGATAAATACGAAA+TGG | + | chr5.4:55463964-55463983 | MS.gene88804:intron | 30.0% | |
| AGAAACCGAACATACTTAAT+TGG | - | chr5.4:55466447-55466466 | None:intergenic | 30.0% | |
| AGACTGTATGTTTACATTGT+AGG | + | chr5.4:55465702-55465721 | MS.gene88804:intron | 30.0% | |
| AGCAATTCCAAATAAGTTCA+CGG | - | chr5.4:55467036-55467055 | None:intergenic | 30.0% | |
| AGCTGTTATCTAATTCAAAG+GGG | + | chr5.4:55464536-55464555 | MS.gene88804:intron | 30.0% | |
| AGCTTCTATCACAATCAAAA+AGG | - | chr5.4:55464520-55464539 | None:intergenic | 30.0% | |
| AGGACTAAAAAATACCTGTT+CGG | - | chr5.4:55464135-55464154 | None:intergenic | 30.0% | |
| ATAATATTTATGTCACGGGT+TGG | + | chr5.4:55466737-55466756 | MS.gene88804:intron | 30.0% | |
| ATATTATTAACGACAAGCTC+GGG | - | chr5.4:55464673-55464692 | None:intergenic | 30.0% | |
| ATCTTTCTTCTTCTAGCAAA+TGG | + | chr5.4:55463683-55463702 | MS.gene88804:CDS | 30.0% | |
| CAAAATAAGAGCAAATACCA+TGG | - | chr5.4:55466603-55466622 | None:intergenic | 30.0% | |
| CCAAATAACCATTTGAAAAG+TGG | - | chr5.4:55464879-55464898 | None:intergenic | 30.0% | |
| CTAATAAGCTCACGAAAAAA+TGG | - | chr5.4:55464641-55464660 | None:intergenic | 30.0% | |
| GAAGCTGTTATCTAATTCAA+AGG | + | chr5.4:55464534-55464553 | MS.gene88804:intron | 30.0% | |
| GAATTGCTAATCTTCAAAAC+TGG | + | chr5.4:55467048-55467067 | MS.gene88804:intron | 30.0% | |
| GACTGTATGTTTACATTGTA+GGG | + | chr5.4:55465703-55465722 | MS.gene88804:intron | 30.0% | |
| GATTTAAACACCGTAAGAAA+TGG | - | chr5.4:55467871-55467890 | None:intergenic | 30.0% | |
| GCTCATTTCTTCAAAAACAA+GGG | + | chr5.4:55463655-55463674 | MS.gene88804:CDS | 30.0% | |
| GTGTGTGTATATAATCCTAA+TGG | + | chr5.4:55466491-55466510 | MS.gene88804:intron | 30.0% | |
| TGAAGTTGAATATACTCTGT+TGG | + | chr5.4:55465409-55465428 | MS.gene88804:intron | 30.0% | |
| TGCTCATTTCTTCAAAAACA+AGG | + | chr5.4:55463654-55463673 | MS.gene88804:CDS | 30.0% | |
| TGGGTAACATGACAAAATAA+TGG | - | chr5.4:55464859-55464878 | None:intergenic | 30.0% | |
| TGTATTTGAGCCATTTCTTA+CGG | + | chr5.4:55467858-55467877 | MS.gene88804:intron | 30.0% | |
| TTAATGGTTGTATACTGCTA+GGG | - | chr5.4:55464966-55464985 | None:intergenic | 30.0% | |
| TTATGACATATTCAATCCAC+TGG | - | chr5.4:55463944-55463963 | None:intergenic | 30.0% | |
| TTCTTTACCGTGAACTTATT+TGG | + | chr5.4:55467026-55467045 | MS.gene88804:intron | 30.0% | |
| TTGTAGTAGCAAGTGAAATT+TGG | - | chr5.4:55465136-55465155 | None:intergenic | 30.0% | |
| TTTAATGGTTGTATACTGCT+AGG | - | chr5.4:55464967-55464986 | None:intergenic | 30.0% | |
| ! | AGGTCTATTATTCAAGTTTG+TGG | - | chr5.4:55465657-55465676 | None:intergenic | 30.0% |
| ! | ATATGCGCTCTTTTATAAAG+GGG | - | chr5.4:55467236-55467255 | None:intergenic | 30.0% |
| ! | CTTGTCATTTGTGATAGAAT+TGG | + | chr5.4:55465973-55465992 | MS.gene88804:intron | 30.0% |
| ! | GAAAAGTTTAAAGTTGAAGC+AGG | + | chr5.4:55467103-55467122 | MS.gene88804:CDS | 30.0% |
| ! | GATATGCGCTCTTTTATAAA+GGG | - | chr5.4:55467237-55467256 | None:intergenic | 30.0% |
| ! | GGTAAAGTTTTTCTCCAATA+AGG | - | chr5.4:55466940-55466959 | None:intergenic | 30.0% |
| ! | GTCTGACATTAAATTTTCCT+TGG | - | chr5.4:55466962-55466981 | None:intergenic | 30.0% |
| ! | GTTACCAAATACGTCTATTT+TGG | + | chr5.4:55464425-55464444 | MS.gene88804:intron | 30.0% |
| ! | TCAAAGCTATTTCAAGTCAA+TGG | - | chr5.4:55465388-55465407 | None:intergenic | 30.0% |
| ! | TGATATGCGCTCTTTTATAA+AGG | - | chr5.4:55467238-55467257 | None:intergenic | 30.0% |
| ! | TGTCATTTGTGATAGAATTG+GGG | + | chr5.4:55465975-55465994 | MS.gene88804:intron | 30.0% |
| ! | TTAATGGCTCGTTTATTTCT+GGG | - | chr5.4:55466214-55466233 | None:intergenic | 30.0% |
| ! | TTACTGGGTTGAAAATGATT+AGG | + | chr5.4:55465907-55465926 | MS.gene88804:intron | 30.0% |
| ! | TTGTGGCTTTGCAATTAATA+TGG | + | chr5.4:55465452-55465471 | MS.gene88804:intron | 30.0% |
| !! | AAGAGGTATTGATTGCTATT+AGG | + | chr5.4:55465211-55465230 | MS.gene88804:intron | 30.0% |
| !! | CCACTTTTCAAATGGTTATT+TGG | + | chr5.4:55464876-55464895 | MS.gene88804:intron | 30.0% |
| !! | GGATATGGATAAGTTGTTTT+TGG | + | chr5.4:55465172-55465191 | MS.gene88804:CDS | 30.0% |
| !! | TGAAAATGATTAGGTTGAGT+TGG | + | chr5.4:55465916-55465935 | MS.gene88804:intron | 30.0% |
| !! | TTATTTCTGGGAAGTTTAAG+AGG | - | chr5.4:55466202-55466221 | None:intergenic | 30.0% |
| !! | TTTTTGGCGATTACTGAATT+GGG | + | chr5.4:55465188-55465207 | MS.gene88804:CDS | 30.0% |
| !!! | CTCGCTACTTTTATTTCTTT+TGG | + | chr5.4:55464567-55464586 | MS.gene88804:intron | 30.0% |
| AAGAAATGAGCATAGAACGA+GGG | - | chr5.4:55463646-55463665 | None:intergenic | 35.0% | |
| AATGTGAGAGAAAACGTTGA+AGG | - | chr5.4:55463554-55463573 | None:intergenic | 35.0% | |
| ACGAAAATCTCACAAACTGA+TGG | - | chr5.4:55465608-55465627 | None:intergenic | 35.0% | |
| AGGACCAAAATAGACGTATT+TGG | - | chr5.4:55464432-55464451 | None:intergenic | 35.0% | |
| ATAAAGCTAGTTCAAGCAAG+TGG | + | chr5.4:55464289-55464308 | MS.gene88804:intron | 35.0% | |
| ATCACACACCATATCTTGTT+TGG | - | chr5.4:55467683-55467702 | None:intergenic | 35.0% | |
| ATGAGCTTATAGCAAATAGC+AGG | + | chr5.4:55464207-55464226 | MS.gene88804:intron | 35.0% | |
| CAAGAAAATTGTTACCGAAC+AGG | + | chr5.4:55464118-55464137 | MS.gene88804:intron | 35.0% | |
| CAATTCCTATCACTTAGCAT+GGG | + | chr5.4:55466080-55466099 | MS.gene88804:intron | 35.0% | |
| CATATACTTGCAGGTTTAGT+TGG | + | chr5.4:55465319-55465338 | MS.gene88804:intron | 35.0% | |
| CGAAAATCTCACAAACTGAT+GGG | - | chr5.4:55465607-55465626 | None:intergenic | 35.0% | |
| CTCAGGAATTCTAGTGTAAA+AGG | - | chr5.4:55466386-55466405 | None:intergenic | 35.0% | |
| CTTAAAGCTTATAAGCTCGT+AGG | - | chr5.4:55464452-55464471 | None:intergenic | 35.0% | |
| CTTAATGGCTCGTTTATTTC+TGG | - | chr5.4:55466215-55466234 | None:intergenic | 35.0% | |
| CTTATAGCAAATAGCAGGTA+GGG | + | chr5.4:55464212-55464231 | MS.gene88804:intron | 35.0% | |
| GATTGTGTGACATTGACAAA+TGG | + | chr5.4:55464904-55464923 | MS.gene88804:intron | 35.0% | |
| GATTGTTATACAGATCCTCT+TGG | + | chr5.4:55465062-55465081 | MS.gene88804:CDS | 35.0% | |
| GCTTATCCGCTATATGTTAT+AGG | - | chr5.4:55464244-55464263 | None:intergenic | 35.0% | |
| TATCGCGTGTGTATATAAGA+AGG | - | chr5.4:55467586-55467605 | None:intergenic | 35.0% | |
| TATTTCAAAGGGTAAAACGG+AGG | + | chr5.4:55467998-55468017 | MS.gene88804:CDS | 35.0% | |
| TCTGCTGTAATGATCCAAAT+CGG | - | chr5.4:55467376-55467395 | None:intergenic | 35.0% | |
| TGGGAAAAAACTGGTAAGTA+TGG | + | chr5.4:55466153-55466172 | MS.gene88804:intron | 35.0% | |
| TTATCTAATTCAAAGGGGCT+GGG | + | chr5.4:55464541-55464560 | MS.gene88804:intron | 35.0% | |
| TTGGAGAAAAACTTTACCCA+AGG | + | chr5.4:55466942-55466961 | MS.gene88804:CDS | 35.0% | |
| TTTCTAATGTGTTACGTTGC+AGG | + | chr5.4:55465027-55465046 | MS.gene88804:intron | 35.0% | |
| TTTCTCCAATAAGGAGTTCT+CGG | - | chr5.4:55466931-55466950 | None:intergenic | 35.0% | |
| ! | AAAGAGCGCATATCATTCAA+AGG | + | chr5.4:55467243-55467262 | MS.gene88804:intron | 35.0% |
| ! | AAGTTTAAAGTTGAAGCAGG+AGG | + | chr5.4:55467106-55467125 | MS.gene88804:CDS | 35.0% |
| ! | GCTATTTGTTACAAGGTCAT+AGG | - | chr5.4:55464155-55464174 | None:intergenic | 35.0% |
| ! | GTGAATCTGGAATGACATTT+AGG | + | chr5.4:55463793-55463812 | MS.gene88804:intron | 35.0% |
| ! | TATGCGCTCTTTTATAAAGG+GGG | - | chr5.4:55467235-55467254 | None:intergenic | 35.0% |
| ! | TGCTTAAGCTCTTCTCTTTT+AGG | + | chr5.4:55467906-55467925 | MS.gene88804:intron | 35.0% |
| ! | TTTTAAATTGTGGGCCGATT+TGG | + | chr5.4:55467359-55467378 | MS.gene88804:intron | 35.0% |
| ! | TTTTAGTGGCCCTTTTGTAT+TGG | + | chr5.4:55464613-55464632 | MS.gene88804:intron | 35.0% |
| !! | AAGGAATTTTGGAAACATGC+AGG | - | chr5.4:55466367-55466386 | None:intergenic | 35.0% |
| !! | AGCTCTTCTCTTTTAGGAAA+TGG | + | chr5.4:55467912-55467931 | MS.gene88804:intron | 35.0% |
| !! | ATCATACCTTGGTGTTCAAA+AGG | - | chr5.4:55467831-55467850 | None:intergenic | 35.0% |
| !! | CATGTTACCCACTTTTCAAA+TGG | + | chr5.4:55464868-55464887 | MS.gene88804:intron | 35.0% |
| !! | GCACCGATTCAAATTTATGA+TGG | + | chr5.4:55467936-55467955 | MS.gene88804:CDS | 35.0% |
| !! | GCTATTTGCTATAAGCTCAT+AGG | - | chr5.4:55464207-55464226 | None:intergenic | 35.0% |
| !! | GGTATTGATTGCTATTAGGT+TGG | + | chr5.4:55465215-55465234 | MS.gene88804:intron | 35.0% |
| !!! | CAGTTCACTTCTGTTTTGAT+AGG | + | chr5.4:55465864-55465883 | MS.gene88804:intron | 35.0% |
| !!! | CAGTTTTTTCCCAAGCTTTA+GGG | - | chr5.4:55466146-55466165 | None:intergenic | 35.0% |
| !!! | GTTTTTGGCGATTACTGAAT+TGG | + | chr5.4:55465187-55465206 | MS.gene88804:CDS | 35.0% |
| !!! | TCCGTTTTACCCTTTGAAAT+AGG | - | chr5.4:55467999-55468018 | None:intergenic | 35.0% |
| AAATGGACGAGTTAGAGTGA+CGG | + | chr5.4:55466992-55467011 | MS.gene88804:CDS | 40.0% | |
| AAGGGTAAGACAAGGAAATC+TGG | + | chr5.4:55465089-55465108 | MS.gene88804:CDS | 40.0% | |
| AAGTTCCCATGCTAAGTGAT+AGG | - | chr5.4:55466088-55466107 | None:intergenic | 40.0% | |
| ACAATTCAATCTCCAGCTGT+CGG | + | chr5.4:55467770-55467789 | MS.gene88804:CDS | 40.0% | |
| ACTAAGTGCTTAGCATGTGT+AGG | - | chr5.4:55467556-55467575 | None:intergenic | 40.0% | |
| ACTCTCACATTCTAGACTTC+TGG | - | chr5.4:55466698-55466717 | None:intergenic | 40.0% | |
| AGGACCAAAAGATACCTGTT+CGG | - | chr5.4:55464187-55464206 | None:intergenic | 40.0% | |
| AGTTGGTTAGACAGTTAGGA+TGG | + | chr5.4:55465933-55465952 | MS.gene88804:intron | 40.0% | |
| ATAGCTAATTGTTGCCGAAC+AGG | + | chr5.4:55464170-55464189 | MS.gene88804:intron | 40.0% | |
| ATTGCATTCTGACCTTCATG+AGG | + | chr5.4:55466836-55466855 | MS.gene88804:CDS | 40.0% | |
| CAACCCAGTAACAACGAATT+GGG | - | chr5.4:55465898-55465917 | None:intergenic | 40.0% | |
| CAATGGTATTACCGAGTCTA+TGG | - | chr5.4:55465371-55465390 | None:intergenic | 40.0% | |
| CACAGTCACAAACAGTTGTA+AGG | + | chr5.4:55467644-55467663 | MS.gene88804:intron | 40.0% | |
| CCAATTCCTATCACTTAGCA+TGG | + | chr5.4:55466079-55466098 | MS.gene88804:intron | 40.0% | |
| CCATGCTAAGTGATAGGAAT+TGG | - | chr5.4:55466082-55466101 | None:intergenic | 40.0% | |
| CCTAAAGCTTGGGAAAAAAC+TGG | + | chr5.4:55466144-55466163 | MS.gene88804:intron | 40.0% | |
| GAAGAAATGAGCATAGAACG+AGG | - | chr5.4:55463647-55463666 | None:intergenic | 40.0% | |
| GACAGAGACCAAACAAGATA+TGG | + | chr5.4:55467672-55467691 | MS.gene88804:intron | 40.0% | |
| GCAACTACATCTGATTGTGA+GGG | - | chr5.4:55467408-55467427 | None:intergenic | 40.0% | |
| GCAAGTGAAATTTGGTCAGA+AGG | - | chr5.4:55465128-55465147 | None:intergenic | 40.0% | |
| GCTTATAGCAAATAGCAGGT+AGG | + | chr5.4:55464211-55464230 | MS.gene88804:intron | 40.0% | |
| GGAAACTAAAGACTGACCTT+CGG | - | chr5.4:55467187-55467206 | None:intergenic | 40.0% | |
| GTTATACAGATCCTCTTGGT+TGG | + | chr5.4:55465066-55465085 | MS.gene88804:CDS | 40.0% | |
| GTTATCTAATTCAAAGGGGC+TGG | + | chr5.4:55464540-55464559 | MS.gene88804:intron | 40.0% | |
| GTTGGTTAGACAGTTAGGAT+GGG | + | chr5.4:55465934-55465953 | MS.gene88804:intron | 40.0% | |
| TCAACCCAGTAACAACGAAT+TGG | - | chr5.4:55465899-55465918 | None:intergenic | 40.0% | |
| TGATAGAATTGGGGCCTTTA+AGG | + | chr5.4:55465984-55466003 | MS.gene88804:intron | 40.0% | |
| TGCAACTACATCTGATTGTG+AGG | - | chr5.4:55467409-55467428 | None:intergenic | 40.0% | |
| TGTGTGACATTGACAAATGG+TGG | + | chr5.4:55464907-55464926 | MS.gene88804:intron | 40.0% | |
| TTCTCATCGTTTCGCTTTCT+CGG | + | chr5.4:55463617-55463636 | MS.gene88804:CDS | 40.0% | |
| TTCTTCCGAGAACTCCTTAT+TGG | + | chr5.4:55466923-55466942 | MS.gene88804:CDS | 40.0% | |
| TTTGGTATGCTAGCTGATAG+TGG | + | chr5.4:55463913-55463932 | MS.gene88804:intron | 40.0% | |
| ! | ACGTTGCAGGATTCATGTTT+TGG | + | chr5.4:55465040-55465059 | MS.gene88804:intron | 40.0% |
| ! | AGGTTGGAAATGTCGCTTAT+TGG | + | chr5.4:55465231-55465250 | MS.gene88804:intron | 40.0% |
| ! | AGTTGGTTTCCCTAAAGCTT+GGG | + | chr5.4:55466134-55466153 | MS.gene88804:intron | 40.0% |
| ! | ATGCGCTCTTTTATAAAGGG+GGG | - | chr5.4:55467234-55467253 | None:intergenic | 40.0% |
| ! | GCAGTATGTGAGTGAGATTT+TGG | - | chr5.4:55463595-55463614 | None:intergenic | 40.0% |
| ! | TAGTTGGTTTCCCTAAAGCT+TGG | + | chr5.4:55466133-55466152 | MS.gene88804:intron | 40.0% |
| ! | TTAGGATGGGAGTATAGGTA+TGG | + | chr5.4:55465947-55465966 | MS.gene88804:intron | 40.0% |
| !! | AGTGTCTTTGATAGTGAGAG+TGG | - | chr5.4:55463515-55463534 | None:intergenic | 40.0% |
| !! | ATGTGAGTGAGATTTTGGTG+AGG | - | chr5.4:55463590-55463609 | None:intergenic | 40.0% |
| !! | GTGTCTTTGATAGTGAGAGT+GGG | - | chr5.4:55463514-55463533 | None:intergenic | 40.0% |
| !! | GTTGAGTTGGTTAGACAGTT+AGG | + | chr5.4:55465929-55465948 | MS.gene88804:intron | 40.0% |
| !! | TTTTGTGCTGCGCTTTTTAG+TGG | + | chr5.4:55464599-55464618 | MS.gene88804:intron | 40.0% |
| !!! | CCAGTTTTTTCCCAAGCTTT+AGG | - | chr5.4:55466147-55466166 | None:intergenic | 40.0% |
| ACAGATCCTCTTGGTTGGAA+GGG | + | chr5.4:55465071-55465090 | MS.gene88804:CDS | 45.0% | |
| ACTTCTGCTTCAGCAGAAGA+TGG | + | chr5.4:55467139-55467158 | MS.gene88804:CDS | 45.0% | |
| AGTCTATGGCAACACAAACG+CGG | - | chr5.4:55465357-55465376 | None:intergenic | 45.0% | |
| ATTCTGACCTTCATGAGGAG+AGG | + | chr5.4:55466841-55466860 | MS.gene88804:CDS | 45.0% | |
| ATTTGCAGATCCTTACGCGA+CGG | + | chr5.4:55463466-55463485 | MS.gene88804:CDS | 45.0% | |
| CAGTAACAACGAATTGGGTG+GGG | - | chr5.4:55465893-55465912 | None:intergenic | 45.0% | |
| CCAAGCAGAAGCCTTAGTTA+TGG | + | chr5.4:55464489-55464508 | MS.gene88804:intron | 45.0% | |
| CCACCCAATTCGTTGTTACT+GGG | + | chr5.4:55465892-55465911 | MS.gene88804:intron | 45.0% | |
| CCAGTAACAACGAATTGGGT+GGG | - | chr5.4:55465894-55465913 | None:intergenic | 45.0% | |
| CCATAACTAAGGCTTCTGCT+TGG | - | chr5.4:55464492-55464511 | None:intergenic | 45.0% | |
| CGTTTGTGTTGCCATAGACT+CGG | + | chr5.4:55465357-55465376 | MS.gene88804:CDS | 45.0% | |
| GAGAAAACGTTGAAGGCGAA+AGG | - | chr5.4:55463547-55463566 | None:intergenic | 45.0% | |
| GCGATTACTGAATTGGGAAG+AGG | + | chr5.4:55465194-55465213 | MS.gene88804:CDS | 45.0% | |
| GTAGGGAACTCATGCAGTAA+GGG | + | chr5.4:55465720-55465739 | MS.gene88804:intron | 45.0% | |
| GTCAGACTCAAACGCAGAAA+TGG | + | chr5.4:55466975-55466994 | MS.gene88804:CDS | 45.0% | |
| TACAGATCCTCTTGGTTGGA+AGG | + | chr5.4:55465070-55465089 | MS.gene88804:CDS | 45.0% | |
| TAGGGAACTCATGCAGTAAG+GGG | + | chr5.4:55465721-55465740 | MS.gene88804:intron | 45.0% | |
| TCTGGGAAGTTTAAGAGGTG+AGG | - | chr5.4:55466197-55466216 | None:intergenic | 45.0% | |
| TCTGGGTCTTCATCAGAATC+TGG | - | chr5.4:55468074-55468093 | None:intergenic | 45.0% | |
| TCTTGAGTACATGTCCTCCA+TGG | + | chr5.4:55466875-55466894 | MS.gene88804:CDS | 45.0% | |
| TGATTCTACACTAGCCACCA+TGG | - | chr5.4:55466895-55466914 | None:intergenic | 45.0% | |
| TGTAGGGAACTCATGCAGTA+AGG | + | chr5.4:55465719-55465738 | MS.gene88804:intron | 45.0% | |
| TTCTGACCTTCATGAGGAGA+GGG | + | chr5.4:55466842-55466861 | MS.gene88804:CDS | 45.0% | |
| TTGGTTGGAAGGGTAAGACA+AGG | + | chr5.4:55465081-55465100 | MS.gene88804:CDS | 45.0% | |
| ! | GACAGTTAGGATGGGAGTAT+AGG | + | chr5.4:55465942-55465961 | MS.gene88804:intron | 45.0% |
| ! | GTGCTTCCTTTTGAACACCA+AGG | + | chr5.4:55467822-55467841 | MS.gene88804:CDS | 45.0% |
| ! | GTTGCCGAACAGGTATCTTT+TGG | + | chr5.4:55464180-55464199 | MS.gene88804:intron | 45.0% |
| !! | GCTGATAGTGGATAAACCAG+TGG | + | chr5.4:55463925-55463944 | MS.gene88804:intron | 45.0% |
| !! | GGAGAAGGAGCAAGTTGATA+GGG | + | chr5.4:55467791-55467810 | MS.gene88804:CDS | 45.0% |
| AGCATGTGTAGGCATGGCAT+CGG | - | chr5.4:55467545-55467564 | None:intergenic | 50.0% | |
| CCCACCCAATTCGTTGTTAC+TGG | + | chr5.4:55465891-55465910 | MS.gene88804:intron | 50.0% | |
| CCCAGTAACAACGAATTGGG+TGG | - | chr5.4:55465895-55465914 | None:intergenic | 50.0% | |
| CTAAGCAATCTGCGTAGCCA+TGG | + | chr5.4:55466583-55466602 | MS.gene88804:CDS | 50.0% | |
| CTCACTGCTGCTCTCTTCAA+GGG | - | chr5.4:55467970-55467989 | None:intergenic | 50.0% | |
| CTTGAAGAGAGCAGCAGTGA+GGG | + | chr5.4:55467969-55467988 | MS.gene88804:CDS | 50.0% | |
| GAAGATGGAACAACCGTTGC+AGG | + | chr5.4:55467154-55467173 | MS.gene88804:CDS | 50.0% | |
| GGCTACGCAGATTGCTTAGA+AGG | - | chr5.4:55466582-55466601 | None:intergenic | 50.0% | |
| GTCTTACCCTTCCAACCAAG+AGG | - | chr5.4:55465080-55465099 | None:intergenic | 50.0% | |
| GTGCTTAGCATGTGTAGGCA+TGG | - | chr5.4:55467551-55467570 | None:intergenic | 50.0% | |
| TGAGTACATGTCCTCCATGG+TGG | + | chr5.4:55466878-55466897 | MS.gene88804:CDS | 50.0% | |
| TTCTACACTAGCCACCATGG+AGG | - | chr5.4:55466892-55466911 | None:intergenic | 50.0% | |
| TTGAAGAGAGCAGCAGTGAG+GGG | + | chr5.4:55467970-55467989 | MS.gene88804:CDS | 50.0% | |
| !! | CGGAGAAGGAGCAAGTTGAT+AGG | + | chr5.4:55467790-55467809 | MS.gene88804:CDS | 50.0% |
| !! | GAGGGGGCACCTATTTCAAA+GGG | + | chr5.4:55467987-55468006 | MS.gene88804:CDS | 50.0% |
| !! | GGAGCAAGTTGATAGGGCAA+AGG | + | chr5.4:55467797-55467816 | MS.gene88804:CDS | 50.0% |
| !! | TGAGGGGGCACCTATTTCAA+AGG | + | chr5.4:55467986-55468005 | MS.gene88804:CDS | 50.0% |
| AAAACGGAGGACTCAGCCCT+AGG | + | chr5.4:55468011-55468030 | MS.gene88804:CDS | 55.0% | |
| CAATCTCCAGCTGTCGGAGA+AGG | + | chr5.4:55467776-55467795 | MS.gene88804:CDS | 55.0% | |
| CCTCACTGCTGCTCTCTTCA+AGG | - | chr5.4:55467971-55467990 | None:intergenic | 55.0% | |
| CCTTGAAGAGAGCAGCAGTG+AGG | + | chr5.4:55467968-55467987 | MS.gene88804:CDS | 55.0% | |
| CTTCGGCAGTAAGCCTGCAA+CGG | - | chr5.4:55467170-55467189 | None:intergenic | 55.0% | |
| GCATCTTTGCAGTCAGTCGC+AGG | + | chr5.4:55466556-55466575 | MS.gene88804:CDS | 55.0% | |
| TGAAGAGAGCAGCAGTGAGG+GGG | + | chr5.4:55467971-55467990 | MS.gene88804:CDS | 55.0% | |
| TTCGGGGGTCTGCACCTTAA+AGG | - | chr5.4:55466001-55466020 | None:intergenic | 55.0% | |
| CGTTGCAGGCTTACTGCCGA+AGG | + | chr5.4:55467168-55467187 | MS.gene88804:CDS | 60.0% | |
| CTGCAGCCCTCTCCTCATGA+AGG | - | chr5.4:55466851-55466870 | None:intergenic | 60.0% | |
| CTTGCTCCTTCTCCGACAGC+TGG | - | chr5.4:55467785-55467804 | None:intergenic | 60.0% | |
| TTACGCGACGGCGCGTTAGA+AGG | + | chr5.4:55463478-55463497 | MS.gene88804:CDS | 60.0% | |
| TTCTAACGCGCCGTCGCGTA+AGG | - | chr5.4:55463479-55463498 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 55463454 | 55468112 | 55463454 | ID=MS.gene88804 |
| chr5.4 | mRNA | 55463454 | 55468112 | 55463454 | ID=MS.gene88804.t1;Parent=MS.gene88804 |
| chr5.4 | exon | 55463454 | 55463704 | 55463454 | ID=MS.gene88804.t1.exon1;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55463454 | 55463704 | 55463454 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55465049 | 55465215 | 55465049 | ID=MS.gene88804.t1.exon2;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55465049 | 55465215 | 55465049 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55465332 | 55465378 | 55465332 | ID=MS.gene88804.t1.exon3;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55465332 | 55465378 | 55465332 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55466535 | 55466604 | 55466535 | ID=MS.gene88804.t1.exon4;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55466535 | 55466604 | 55466535 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55466811 | 55467013 | 55466811 | ID=MS.gene88804.t1.exon5;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55466811 | 55467013 | 55466811 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55467100 | 55467189 | 55467100 | ID=MS.gene88804.t1.exon6;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55467100 | 55467189 | 55467100 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55467768 | 55467843 | 55467768 | ID=MS.gene88804.t1.exon7;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55467768 | 55467843 | 55467768 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| chr5.4 | exon | 55467928 | 55468112 | 55467928 | ID=MS.gene88804.t1.exon8;Parent=MS.gene88804.t1 |
| chr5.4 | CDS | 55467928 | 55468112 | 55467928 | ID=cds.MS.gene88804.t1;Parent=MS.gene88804.t1 |
| Gene Sequence |
| Protein sequence |
