Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89161.t1 | XP_003627350.2 | 98.1 | 1082 | 20 | 1 | 1 | 1082 | 1 | 1081 | 0.00E+00 | 2147.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89161.t1 | Q8L748 | 64.7 | 1114 | 344 | 13 | 1 | 1082 | 1 | 1097 | 0.0e+00 | 1417.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89161.t1 | G7L8A5 | 98.1 | 1082 | 20 | 1 | 1 | 1082 | 1 | 1081 | 0.0e+00 | 2147.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050945 | MS.gene89161 | 0.830448 | 2.92E-55 | -1.69E-46 |
| MS.gene051450 | MS.gene89161 | 0.835313 | 1.80E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89161.t1 | MTR_8g022010 | 98.059 | 1082 | 20 | 1 | 1 | 1082 | 1 | 1081 | 0.0 | 2204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89161.t1 | AT3G14120 | 66.147 | 1090 | 344 | 12 | 1 | 1082 | 1 | 1073 | 0.0 | 1454 |
| MS.gene89161.t1 | AT3G14120 | 64.896 | 1111 | 344 | 13 | 1 | 1082 | 1 | 1094 | 0.0 | 1442 |
| MS.gene89161.t1 | AT3G14120 | 64.722 | 1114 | 344 | 13 | 1 | 1082 | 1 | 1097 | 0.0 | 1439 |
Find 268 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCTTGTGGTTCCTTTA+TGG | 0.112266 | 8.1:-77957200 | MS.gene89161:CDS |
| CTCTGTACGCTATTCATTAA+AGG | 0.119276 | 8.1:-77959188 | MS.gene89161:CDS |
| CAGCCCACTTTCACTTAATT+TGG | 0.150697 | 8.1:+77959387 | None:intergenic |
| CTCCTTTGAAAACAGAAATT+TGG | 0.159095 | 8.1:+77948229 | None:intergenic |
| CTCTCTTGTGGTTCCTTTAT+GGG | 0.159196 | 8.1:-77957199 | MS.gene89161:CDS |
| AGGTGAGCTTCCTCGGTTTC+AGG | 0.188572 | 8.1:-77941884 | MS.gene89161:CDS |
| GCTTCCTCTCTGTGTCCTTT+TGG | 0.204457 | 8.1:-77952241 | MS.gene89161:CDS |
| CTTCATTTCCTCGCGGGCCT+CGG | 0.231518 | 8.1:+77948521 | None:intergenic |
| TTCTTCGATGGACGAATCTA+AGG | 0.238299 | 8.1:-77945050 | MS.gene89161:CDS |
| GAAACAAACATCACATTTAA+TGG | 0.238536 | 8.1:-77956284 | MS.gene89161:CDS |
| TTGTTTACATGATGGAATTT+AGG | 0.272162 | 8.1:-77948145 | MS.gene89161:CDS |
| TTGGTCATCAGTGGCATCTT+TGG | 0.274985 | 8.1:-77952132 | MS.gene89161:CDS |
| CTTCTAATGGACCTGAAAAT+TGG | 0.286910 | 8.1:-77951388 | MS.gene89161:CDS |
| TGTCAGAAGTTCCTTTCTTT+AGG | 0.295451 | 8.1:+77953160 | None:intergenic |
| AGGATGTATGGACTCTTCTA+AGG | 0.297421 | 8.1:-77952399 | MS.gene89161:CDS |
| GGCTCCTTTGATCCTTCTAA+TGG | 0.315142 | 8.1:-77951401 | MS.gene89161:CDS |
| GAAACGTTTCAGAATCTATC+AGG | 0.318651 | 8.1:-77958659 | MS.gene89161:intron |
| CATGTAGCAATGTACTCTTC+AGG | 0.330746 | 8.1:-77944183 | MS.gene89161:intron |
| GATTCGTCCATCGAAGAAAA+TGG | 0.338908 | 8.1:+77945055 | None:intergenic |
| ATCAGTGGCATCTTTGGAAA+TGG | 0.340767 | 8.1:-77952126 | MS.gene89161:CDS |
| CAGGTTTCTGTTTCTCTCAT+GGG | 0.340913 | 8.1:-77941494 | MS.gene89161:CDS |
| AAGTCAAGAAAGCGAGTTTC+AGG | 0.346358 | 8.1:+77941419 | None:intergenic |
| GGAATACTCAATCTGCAAAA+TGG | 0.348164 | 8.1:-77940774 | MS.gene89161:CDS |
| CCTTTCACAATGTAAGTTGC+AGG | 0.349817 | 8.1:+77941793 | None:intergenic |
| AACAGGAACTTCTGCATTCT+CGG | 0.352313 | 8.1:+77943853 | None:intergenic |
| TGTGGACTTTGCCGGTCTGC+TGG | 0.355863 | 8.1:-77952355 | MS.gene89161:CDS |
| ATCTCCCCAGCAGTGGTGTT+TGG | 0.360577 | 8.1:-77953200 | MS.gene89161:CDS |
| TTCATTTCCTCGCGGGCCTC+GGG | 0.367738 | 8.1:+77948522 | None:intergenic |
| GTTCAGTCAACAGCAATTAC+AGG | 0.371855 | 8.1:-77941396 | MS.gene89161:intron |
| GGAGCAACAACGACAAATTC+AGG | 0.374077 | 8.1:-77951187 | MS.gene89161:intron |
| AGGATAGTCCAGTGGTTAGA+AGG | 0.375010 | 8.1:-77956217 | MS.gene89161:CDS |
| GTTGACCAACTTGGAACTTT+CGG | 0.375093 | 8.1:-77951458 | MS.gene89161:CDS |
| GCAGGTTTCTGTTTCTCTCA+TGG | 0.377266 | 8.1:-77941495 | MS.gene89161:intron |
| TCTGTTTCTCTCATGGGATC+AGG | 0.379130 | 8.1:-77941488 | MS.gene89161:CDS |
| AAGAGGCGTGTGGACTTTGC+CGG | 0.381719 | 8.1:-77952363 | MS.gene89161:CDS |
| CTTAGCAATGTTATAGCTGC+TGG | 0.388908 | 8.1:-77942675 | MS.gene89161:CDS |
| TTGACATTAGCAATTGTTGA+TGG | 0.390395 | 8.1:+77944779 | None:intergenic |
| AGGTCAACGGCTGATATTCC+TGG | 0.393573 | 8.1:-77959238 | MS.gene89161:CDS |
| TGTTGATTCAAAACTTGAAT+TGG | 0.393636 | 8.1:+77951365 | None:intergenic |
| AGGAAGAGGCACTTGAATTC+AGG | 0.394647 | 8.1:-77959439 | MS.gene89161:CDS |
| CCACGATAACTTGATTGAAC+TGG | 0.396958 | 8.1:-77941450 | MS.gene89161:CDS |
| CACTACCTCTGATGCGCAAT+AGG | 0.398263 | 8.1:+77952099 | None:intergenic |
| GTGCTATCCATGACCATATA+AGG | 0.401084 | 8.1:+77950780 | None:intergenic |
| AAGACGACCAGAATGTATTT+AGG | 0.401893 | 8.1:-77950751 | MS.gene89161:intron |
| CGCGAGAAGTTCCGCAGATA+CGG | 0.404346 | 8.1:-77960580 | MS.gene89161:CDS |
| TGCTTCCACTCTGCACAGAT+TGG | 0.404813 | 8.1:-77951843 | MS.gene89161:CDS |
| ATCAAGTTATCGTGGGAATC+AGG | 0.405278 | 8.1:+77941458 | None:intergenic |
| TCATCCATGCCAGGGATTCC+AGG | 0.407965 | 8.1:+77959220 | None:intergenic |
| TCTAGTGACAACTCAGAAAC+AGG | 0.407971 | 8.1:+77943836 | None:intergenic |
| AATCAAAATGGAGGAAGAAA+TGG | 0.409092 | 8.1:-77960644 | None:intergenic |
| TCCGTCTTAGATTGCTGCAT+TGG | 0.409534 | 8.1:+77951866 | None:intergenic |
| GCGCAGCATTAGTAGGACTA+TGG | 0.411018 | 8.1:+77959344 | None:intergenic |
| TGGTATGTCCGCTAGCATTA+AGG | 0.411181 | 8.1:+77950814 | None:intergenic |
| GCAATGCTCTGCCTGCCATC+TGG | 0.411776 | 8.1:-77943508 | MS.gene89161:CDS |
| ATTGCCGTGTAACAGTTTCA+TGG | 0.414784 | 8.1:+77951214 | None:intergenic |
| AAACTTACCTAAATACATTC+TGG | 0.416786 | 8.1:+77950744 | None:intergenic |
| ACAGGTATGGCTTGAACATA+AGG | 0.417087 | 8.1:-77957292 | MS.gene89161:intron |
| CCGTCTTAGATTGCTGCATT+GGG | 0.420367 | 8.1:+77951867 | None:intergenic |
| AGAATAAGCGCAGCATTAGT+AGG | 0.421205 | 8.1:+77959337 | None:intergenic |
| GCATGAAGTTCAAGGAAAAC+AGG | 0.425168 | 8.1:+77943535 | None:intergenic |
| ATAGGTGCCCACACAGCTCT+TGG | 0.425335 | 8.1:-77944118 | MS.gene89161:CDS |
| CTGTTTGATACCTCTTTGAC+AGG | 0.425705 | 8.1:-77959100 | MS.gene89161:intron |
| GATGTAATGGACCGAAGTCC+TGG | 0.425827 | 8.1:-77951434 | MS.gene89161:CDS |
| GGAACTCTAAGTTGCCATCT+TGG | 0.426031 | 8.1:+77941815 | None:intergenic |
| TGAGTTGTCACTAGAGGAAA+AGG | 0.426746 | 8.1:-77943828 | MS.gene89161:CDS |
| TGAGGCACAATTGAGCTATA+TGG | 0.431101 | 8.1:+77956239 | None:intergenic |
| CTTAGTATCAGATCAGGAAT+AGG | 0.432722 | 8.1:+77958699 | None:intergenic |
| CACGTGTACTAGACCTTATA+TGG | 0.433257 | 8.1:-77950793 | MS.gene89161:CDS |
| AGTCTCTGCAAGTTGTTTCA+AGG | 0.434656 | 8.1:+77944081 | None:intergenic |
| TCAAATCTTAGTATCAGATC+AGG | 0.436673 | 8.1:+77958693 | None:intergenic |
| CTCAGTTGAGCAGGATTACT+CGG | 0.437818 | 8.1:-77959413 | MS.gene89161:CDS |
| CAAGATATTCCTTTCTGCTA+TGG | 0.440416 | 8.1:-77945086 | MS.gene89161:CDS |
| AACATTTGCAGTCAGCATGC+TGG | 0.440998 | 8.1:-77951553 | MS.gene89161:intron |
| CTATTGTAGGTGAGCTTCCT+CGG | 0.442936 | 8.1:-77941891 | MS.gene89161:intron |
| AATCTCTTCTAGAGGATGTA+TGG | 0.444245 | 8.1:-77952411 | MS.gene89161:CDS |
| AAATATCCCGATTGGATGCT+TGG | 0.445498 | 8.1:-77941846 | MS.gene89161:CDS |
| CGAGGCCCGCGAGGAAATGA+AGG | 0.447759 | 8.1:-77948520 | MS.gene89161:CDS |
| CGAAGTCCTGGACAAGTTGA+TGG | 0.452101 | 8.1:-77951422 | MS.gene89161:CDS |
| GAGCTTCAACAGAAGGAAAC+AGG | 0.452470 | 8.1:+77952209 | None:intergenic |
| ACTTTGCCGGTCTGCTGGAC+AGG | 0.453107 | 8.1:-77952350 | MS.gene89161:intron |
| TGGTCAACTCCTCCTCCTGC+TGG | 0.454154 | 8.1:+77951473 | None:intergenic |
| TGGAACTTTCGGAGATGTAA+TGG | 0.454179 | 8.1:-77951447 | MS.gene89161:CDS |
| ATGCATCGAAGAATGACTTC+TGG | 0.455900 | 8.1:+77941748 | None:intergenic |
| GCAATAGTCGGTGACGGACT+TGG | 0.457112 | 8.1:-77942726 | MS.gene89161:CDS |
| GATCCTCAGATGATACGATT+TGG | 0.458276 | 8.1:-77948576 | MS.gene89161:CDS |
| AGAGCTGTGTGGGCACCTAT+AGG | 0.459250 | 8.1:+77944121 | None:intergenic |
| GCTTTCTAAAGAGCAAATAC+TGG | 0.460475 | 8.1:-77956396 | MS.gene89161:intron |
| TTGCAGTTGCATGAAGTTCA+AGG | 0.461546 | 8.1:+77943527 | None:intergenic |
| TTCAGGTGCCTCAGTTGAGC+AGG | 0.461860 | 8.1:-77959422 | MS.gene89161:CDS |
| AATGGCTTGTGAGTTTGTTA+CGG | 0.463445 | 8.1:-77956266 | MS.gene89161:CDS |
| ATGATGCCAAACACCACTGC+TGG | 0.464775 | 8.1:+77953194 | None:intergenic |
| GTGTAAAGTACTTTGTCATC+AGG | 0.464790 | 8.1:+77953078 | None:intergenic |
| GAGTCTCAATGCTGATTACT+TGG | 0.465039 | 8.1:-77959290 | MS.gene89161:CDS |
| TTGTGGTTCCTTTATGGGGA+AGG | 0.465817 | 8.1:-77957194 | MS.gene89161:intron |
| ATATAGCTCAATTGTGCCTC+AGG | 0.466702 | 8.1:-77956237 | MS.gene89161:CDS |
| GGAAATGAAGGGTGCTCTCA+TGG | 0.466876 | 8.1:-77948508 | MS.gene89161:CDS |
| ATATATTACCTTCCCCATAA+AGG | 0.468026 | 8.1:+77957186 | None:intergenic |
| TCAGTGGCATCTTTGGAAAT+GGG | 0.468419 | 8.1:-77952125 | MS.gene89161:CDS |
| AAGCAAGAAGGCGACTCGTT+GGG | 0.474566 | 8.1:-77959160 | MS.gene89161:CDS |
| TGCATCGAAGAATGACTTCT+GGG | 0.474862 | 8.1:+77941749 | None:intergenic |
| GCTTCCACTCTGCACAGATT+GGG | 0.479613 | 8.1:-77951842 | MS.gene89161:CDS |
| GTGATGCAACCTACCGCAAT+TGG | 0.479764 | 8.1:-77943889 | MS.gene89161:CDS |
| TTCTTCGAGCATTGATACAT+AGG | 0.480500 | 8.1:-77944736 | MS.gene89161:intron |
| AGACCTCTTTGTTTACATGA+TGG | 0.480655 | 8.1:-77948153 | MS.gene89161:CDS |
| CAGAATACCAAGCATCCAAT+CGG | 0.480907 | 8.1:+77941839 | None:intergenic |
| AGACGCAGTCAGTGTTTCCT+TGG | 0.481161 | 8.1:+77943787 | None:intergenic |
| TTTACATTTACGCAGGTTCG+CGG | 0.481920 | 8.1:-77953240 | MS.gene89161:intron |
| TGTGCCTCTTACAGGCCTCA+TGG | 0.483274 | 8.1:-77948600 | MS.gene89161:intron |
| ACATTTGCAGTCAGCATGCT+GGG | 0.483958 | 8.1:-77951552 | MS.gene89161:intron |
| CTATTCTTCTGTTGGTGATG+AGG | 0.485098 | 8.1:-77943434 | MS.gene89161:CDS |
| ATGTAGCAATGTACTCTTCA+GGG | 0.487508 | 8.1:-77944182 | MS.gene89161:intron |
| GCTGGGCAATGGCGAAGTCT+TGG | 0.488273 | 8.1:-77951535 | MS.gene89161:CDS |
| AGCACCCTTCATTTCCTCGC+GGG | 0.488882 | 8.1:+77948515 | None:intergenic |
| GTATGGACTCTTCTAAGGGC+TGG | 0.491405 | 8.1:-77952394 | MS.gene89161:CDS |
| AGCTTCTAAAGCACTTGACT+TGG | 0.491449 | 8.1:-77956191 | MS.gene89161:CDS |
| CATCACCAACAGAAGAATAG+AGG | 0.492239 | 8.1:+77943437 | None:intergenic |
| TGAATGCCACTATATCTTCA+AGG | 0.493330 | 8.1:-77942785 | MS.gene89161:CDS |
| TGGGCACCTATAGGCATTGC+TGG | 0.495209 | 8.1:+77944130 | None:intergenic |
| CTCTGTATTCCTCTAGAAAG+AGG | 0.496375 | 8.1:-77959258 | MS.gene89161:CDS |
| TACTCTCCACATAGAAATCA+AGG | 0.496644 | 8.1:+77944153 | None:intergenic |
| TTCAAAGGAGCACGAGGAGT+TGG | 0.498157 | 8.1:-77948216 | MS.gene89161:CDS |
| AGATCTCGAGAGATCAAGAT+TGG | 0.498495 | 8.1:-77944893 | MS.gene89161:CDS |
| GTGGTGCATACAGTAGCATC+TGG | 0.498510 | 8.1:+77943472 | None:intergenic |
| ATCTGAGGGAGTTCGAAGAA+TGG | 0.503897 | 8.1:-77944024 | MS.gene89161:CDS |
| GGAATCCCTGGCATGGATGA+TGG | 0.503917 | 8.1:-77959217 | MS.gene89161:CDS |
| TCAAAACCATCATCCATGCC+AGG | 0.513635 | 8.1:+77959211 | None:intergenic |
| GAACAATATCAATGCAATAG+TGG | 0.513853 | 8.1:+77942760 | None:intergenic |
| GCTTCCAAATTAAGTGAAAG+TGG | 0.514659 | 8.1:-77959391 | MS.gene89161:CDS |
| CTCGAAAACATTATGATCAT+CGG | 0.515167 | 8.1:+77944048 | None:intergenic |
| CTTCGTTGCTTAGCAATAGT+CGG | 0.516058 | 8.1:-77942738 | MS.gene89161:CDS |
| TACAATGGAAATATCCCGAT+TGG | 0.516479 | 8.1:-77941854 | MS.gene89161:CDS |
| TCTCTTGTGGTTCCTTTATG+GGG | 0.519983 | 8.1:-77957198 | MS.gene89161:CDS |
| AGAAAATAGCAGAGCTAGGT+GGG | 0.521605 | 8.1:-77951915 | MS.gene89161:CDS |
| TCTGAGGGAGTTCGAAGAAT+GGG | 0.522621 | 8.1:-77944023 | MS.gene89161:intron |
| GTCTCTGCAAGTTGTTTCAA+GGG | 0.522762 | 8.1:+77944082 | None:intergenic |
| CAAGCTGTTGAATTTGAAAG+TGG | 0.524385 | 8.1:-77952157 | MS.gene89161:CDS |
| AAGGAGCCATCAACTTGTCC+AGG | 0.524605 | 8.1:+77951416 | None:intergenic |
| TCGCGAGTGGTGAGGTCTTG+CGG | 0.526073 | 8.1:+77960598 | None:intergenic |
| GTGATGAGGTTGTCTCAAAT+CGG | 0.527451 | 8.1:-77943420 | MS.gene89161:CDS |
| GCGAGAAGTTCCGCAGATAC+GGG | 0.527520 | 8.1:-77960579 | MS.gene89161:intron |
| GTTGAATTTGAAAGTGGCAT+TGG | 0.528201 | 8.1:-77952151 | MS.gene89161:CDS |
| GCTGATATTCCTGGAATCCC+TGG | 0.528919 | 8.1:-77959229 | MS.gene89161:CDS |
| CGTTCACTGCCAGCAGGAGG+AGG | 0.530394 | 8.1:-77951482 | MS.gene89161:CDS |
| TCTTGAAAATATTAAACAAG+AGG | 0.530658 | 8.1:-77959317 | MS.gene89161:CDS |
| GTTGAAGCTCTGTCGAAGAA+TGG | 0.532224 | 8.1:-77952196 | MS.gene89161:CDS |
| AAAGGAGCACGAGGAGTTGG+TGG | 0.533553 | 8.1:-77948213 | MS.gene89161:CDS |
| GTCACTAGAGGAAAAGGAAA+GGG | 0.534301 | 8.1:-77943822 | MS.gene89161:CDS |
| GGATATTTCCATTGTAACTC+CGG | 0.534594 | 8.1:+77941861 | None:intergenic |
| AAGCTAAACCTTCTAACCAC+TGG | 0.534835 | 8.1:+77956209 | None:intergenic |
| GGAGGAGGAGTTGACCAACT+TGG | 0.534981 | 8.1:-77951467 | MS.gene89161:CDS |
| ATGTTGCCGCTTCATCGAGC+AGG | 0.535509 | 8.1:+77957225 | None:intergenic |
| ATTGCGGTAGGTTGCATCAC+AGG | 0.536167 | 8.1:+77943892 | None:intergenic |
| AACAGGTTCAAACCTCCAAA+AGG | 0.536258 | 8.1:+77952226 | None:intergenic |
| AGTGCCCTCTATTCTTCTGT+TGG | 0.536717 | 8.1:-77943442 | MS.gene89161:CDS |
| GAGCTTCCTCGGTTTCAGGC+CGG | 0.537041 | 8.1:-77941880 | MS.gene89161:CDS |
| CAGGAATGTTGTTCATCACC+TGG | 0.538079 | 8.1:-77953139 | MS.gene89161:CDS |
| GTCACTCGTTCACTGCCAGC+AGG | 0.539049 | 8.1:-77951488 | MS.gene89161:CDS |
| TACTAGACCTTATATGGTCA+TGG | 0.541153 | 8.1:-77950787 | MS.gene89161:CDS |
| AGGTCTTGCGGATCGAAGAA+AGG | 0.541376 | 8.1:+77960610 | None:intergenic |
| ACTCAACGTTACCTAAAGAA+AGG | 0.543574 | 8.1:-77953171 | MS.gene89161:CDS |
| TTCGACAGAGCTTCAACAGA+AGG | 0.544143 | 8.1:+77952202 | None:intergenic |
| TTGTGAAAGGACTTTGTCGC+AGG | 0.546395 | 8.1:-77941780 | MS.gene89161:CDS |
| CAAGCAAGAAGGCGACTCGT+TGG | 0.548539 | 8.1:-77959161 | MS.gene89161:CDS |
| TTGCAGAAAATAGCAGAGCT+AGG | 0.548794 | 8.1:-77951919 | MS.gene89161:intron |
| GCAGTCAGCATGCTGGGCAA+TGG | 0.550304 | 8.1:-77951546 | MS.gene89161:intron |
| GCTGTTCTGCAACATCTGAC+AGG | 0.550330 | 8.1:+77944858 | None:intergenic |
| GGACCACATGATTTCAATGA+CGG | 0.551894 | 8.1:-77942705 | MS.gene89161:CDS |
| TGCTCACCTGTCCAGCAGAC+CGG | 0.552005 | 8.1:+77952344 | None:intergenic |
| CGGCAACATGGTCTCTCTTG+TGG | 0.552011 | 8.1:-77957211 | MS.gene89161:CDS |
| ACATTCTGGTCGTCTTCCAC+AGG | 0.553490 | 8.1:+77950758 | None:intergenic |
| AGAATACCAAGCATCCAATC+GGG | 0.554917 | 8.1:+77941840 | None:intergenic |
| AGGAAGAGAAACACACTGGC+TGG | 0.555629 | 8.1:-77943590 | MS.gene89161:CDS |
| AAGAAAACCAAGAGCTGTGT+GGG | 0.556017 | 8.1:+77944111 | None:intergenic |
| TGATGCCAAACACCACTGCT+GGG | 0.556207 | 8.1:+77953195 | None:intergenic |
| AAGGGCTATTTCAGCTGCCA+AGG | 0.557120 | 8.1:-77943804 | MS.gene89161:CDS |
| GCTAGATGTGCAGATAGACT+TGG | 0.559521 | 8.1:-77951513 | MS.gene89161:CDS |
| AGAGTACCAGCAATGCCTAT+AGG | 0.562763 | 8.1:-77944136 | MS.gene89161:CDS |
| TGTTTCTGAGTTGTCACTAG+AGG | 0.563290 | 8.1:-77943834 | MS.gene89161:CDS |
| AACTGTTACACGGCAATGCA+AGG | 0.563752 | 8.1:-77951208 | MS.gene89161:CDS |
| AGCACTTGACTTGGAAGCAA+AGG | 0.565563 | 8.1:-77956182 | MS.gene89161:intron |
| CATCTCCGAAAGTTCCAAGT+TGG | 0.568201 | 8.1:+77951453 | None:intergenic |
| TTAAAGGCTTGCAAGCAAGA+AGG | 0.569589 | 8.1:-77959172 | MS.gene89161:CDS |
| AGGTCCATTAGAAGGATCAA+AGG | 0.572414 | 8.1:+77951397 | None:intergenic |
| GTTTCAGGCCGGAGTTACAA+TGG | 0.573390 | 8.1:-77941869 | MS.gene89161:CDS |
| CATCAACTTGTCCAGGACTT+CGG | 0.574990 | 8.1:+77951423 | None:intergenic |
| GGACTCTTCTAAGGGCTGGA+AGG | 0.574990 | 8.1:-77952390 | MS.gene89161:CDS |
| CCTGCAACTTACATTGTGAA+AGG | 0.575901 | 8.1:-77941793 | MS.gene89161:CDS |
| ATTCCATCATGTAAACAAAG+AGG | 0.577332 | 8.1:+77948150 | None:intergenic |
| CCAGTTCAATCAAGTTATCG+TGG | 0.577924 | 8.1:+77941450 | None:intergenic |
| TCTTCGATGGACGAATCTAA+GGG | 0.578690 | 8.1:-77945049 | MS.gene89161:CDS |
| TAAAGAAAGGAACTTCTGAC+AGG | 0.581733 | 8.1:-77953158 | MS.gene89161:CDS |
| GTGGTCCCTTGAAGATATAG+TGG | 0.581949 | 8.1:+77942779 | None:intergenic |
| GCAGGTTCGCGGATCACATG+TGG | 0.582833 | 8.1:-77953229 | MS.gene89161:intron |
| ACAAACAATCTCCAGATGGC+AGG | 0.583932 | 8.1:+77943497 | None:intergenic |
| GAGTTGGAGCATCAAAGTCC+AGG | 0.584766 | 8.1:+77953121 | None:intergenic |
| CATAAGGCATCGAGTTGTTG+AGG | 0.585619 | 8.1:-77957276 | MS.gene89161:CDS |
| TGCTCGATGAAGCGGCAACA+TGG | 0.587017 | 8.1:-77957223 | MS.gene89161:CDS |
| ATGGACAAGATTCTGACCGT+TGG | 0.589763 | 8.1:-77948489 | MS.gene89161:CDS |
| CACAGAGAGGAAGCTCTCCA+TGG | 0.590254 | 8.1:+77952250 | None:intergenic |
| GTAACTCCGGCCTGAAACCG+AGG | 0.591092 | 8.1:+77941874 | None:intergenic |
| GGCTTCCTATTGCGCATCAG+AGG | 0.591924 | 8.1:-77952104 | MS.gene89161:intron |
| GTAAGTATTCCATAGCAGAA+AGG | 0.592282 | 8.1:+77945077 | None:intergenic |
| AATGGAGGAAGAAATGGCAA+TGG | 0.592471 | 8.1:-77960638 | MS.gene89161:CDS |
| TCCACTCTGCACAGATTGGG+AGG | 0.593465 | 8.1:-77951839 | MS.gene89161:intron |
| GGATGTATGGACTCTTCTAA+GGG | 0.594158 | 8.1:-77952398 | MS.gene89161:CDS |
| GGAACTTCTCGCGAGTGGTG+AGG | 0.595064 | 8.1:+77960590 | None:intergenic |
| GGTAGTTATCTCCCCAGCAG+TGG | 0.595914 | 8.1:-77953207 | MS.gene89161:CDS |
| GAGGTGTGAAGCAAAGCCAC+TGG | 0.596678 | 8.1:+77944801 | None:intergenic |
| CCCAATGCAGCAATCTAAGA+CGG | 0.598755 | 8.1:-77951867 | MS.gene89161:CDS |
| AGCCGTTGACCTCTTTCTAG+AGG | 0.599289 | 8.1:+77959249 | None:intergenic |
| AGTTTGCCTTGATTTCTATG+TGG | 0.599760 | 8.1:-77944159 | MS.gene89161:CDS |
| CTTTCACAATGTAAGTTGCA+GGG | 0.600191 | 8.1:+77941794 | None:intergenic |
| TCAGCTCCTGCTCGATGAAG+CGG | 0.601401 | 8.1:-77957231 | MS.gene89161:CDS |
| GGCTTGTGAGTTTGTTACGG+AGG | 0.602397 | 8.1:-77956263 | MS.gene89161:CDS |
| TGTCTCAAATCGGCAGCTAG+TGG | 0.602848 | 8.1:-77943410 | MS.gene89161:intron |
| GGACAAATTAATGAGGCAGA+AGG | 0.606309 | 8.1:-77957255 | MS.gene89161:CDS |
| CAGAAAATAGCAGAGCTAGG+TGG | 0.613584 | 8.1:-77951916 | MS.gene89161:CDS |
| GAATGCCACTATATCTTCAA+GGG | 0.614626 | 8.1:-77942784 | MS.gene89161:CDS |
| CTTCCAAATTAAGTGAAAGT+GGG | 0.614863 | 8.1:-77959390 | MS.gene89161:CDS |
| TCTGCGGAACTTCTCGCGAG+TGG | 0.614878 | 8.1:+77960585 | None:intergenic |
| TATTCCTGGAATCCCTGGCA+TGG | 0.615462 | 8.1:-77959224 | MS.gene89161:CDS |
| TGCTTAGCAATAGTCGGTGA+CGG | 0.618835 | 8.1:-77942732 | MS.gene89161:CDS |
| ATGGTCATGGATAGCACCTG+TGG | 0.619071 | 8.1:-77950774 | MS.gene89161:CDS |
| ACAAGATGAATCTCTTCTAG+AGG | 0.619857 | 8.1:-77952419 | MS.gene89161:CDS |
| ATCACCAACAGAAGAATAGA+GGG | 0.621079 | 8.1:+77943438 | None:intergenic |
| TTGTTGAGGACAAATTAATG+AGG | 0.621559 | 8.1:-77957262 | MS.gene89161:CDS |
| TGGAATTTAGGCTACACAGC+AGG | 0.623001 | 8.1:-77948133 | MS.gene89161:intron |
| CAAAACCATCATCCATGCCA+GGG | 0.623374 | 8.1:+77959212 | None:intergenic |
| CAGTTCAATCAAGTTATCGT+GGG | 0.627345 | 8.1:+77941451 | None:intergenic |
| AAAGTGGCATTGGTCATCAG+TGG | 0.628105 | 8.1:-77952141 | MS.gene89161:CDS |
| GCTTGGTATTCTGACCAAGA+TGG | 0.628121 | 8.1:-77941829 | MS.gene89161:CDS |
| AGTTATCGTGGGAATCAGGA+TGG | 0.628150 | 8.1:+77941462 | None:intergenic |
| CTGCAAAATGGAGCATACAC+AGG | 0.635916 | 8.1:-77940762 | MS.gene89161:CDS |
| CAAGAAAACCAAGAGCTGTG+TGG | 0.638870 | 8.1:+77944110 | None:intergenic |
| AAGGAGCACGAGGAGTTGGT+GGG | 0.639639 | 8.1:-77948212 | MS.gene89161:CDS |
| GTGTAAAATATGATCACCAA+CGG | 0.642464 | 8.1:+77948473 | None:intergenic |
| TGTCACTAGAGGAAAAGGAA+AGG | 0.645031 | 8.1:-77943823 | MS.gene89161:CDS |
| CCACCGTCATTGAAATCATG+TGG | 0.646799 | 8.1:+77942702 | None:intergenic |
| GCACCAAATCGTATCATCTG+AGG | 0.647917 | 8.1:+77948573 | None:intergenic |
| CATATAAGGTCTAGTACACG+TGG | 0.648044 | 8.1:+77950794 | None:intergenic |
| ACATTAGCAATTGTTGATGG+AGG | 0.648221 | 8.1:+77944782 | None:intergenic |
| ACCTCCCAATCTGTGCAGAG+TGG | 0.648501 | 8.1:+77951838 | None:intergenic |
| AAGGGCTGGAAGGCTAGAAG+AGG | 0.649819 | 8.1:-77952380 | MS.gene89161:CDS |
| TGATCCATGAAACTGTTACA+CGG | 0.649895 | 8.1:-77951218 | MS.gene89161:CDS |
| AGAGTAGTGACCCGTATCTG+CGG | 0.651877 | 8.1:+77960569 | None:intergenic |
| TTCCTCTAGAAAGAGGTCAA+CGG | 0.651975 | 8.1:-77959251 | MS.gene89161:CDS |
| GAGGCCCGCGAGGAAATGAA+GGG | 0.653429 | 8.1:-77948519 | MS.gene89161:CDS |
| GAGCACCCTTCATTTCCTCG+CGG | 0.654127 | 8.1:+77948514 | None:intergenic |
| ACTCGTTCACTGCCAGCAGG+AGG | 0.656023 | 8.1:-77951485 | MS.gene89161:CDS |
| GATGCCAAACACCACTGCTG+GGG | 0.660508 | 8.1:+77953196 | None:intergenic |
| AAACAAAGAGGTCTATGCAA+CGG | 0.662149 | 8.1:+77948162 | None:intergenic |
| CCACATGATTTCAATGACGG+TGG | 0.662681 | 8.1:-77942702 | MS.gene89161:CDS |
| CGAGTAATCCTGCTCAACTG+AGG | 0.663790 | 8.1:+77959414 | None:intergenic |
| ATATTTGCCCGAGGCCCGCG+AGG | 0.664965 | 8.1:-77948529 | MS.gene89161:CDS |
| GATAACTTGATTGAACTGGT+TGG | 0.669009 | 8.1:-77941446 | MS.gene89161:CDS |
| CAGGTTCGCGGATCACATGT+GGG | 0.670460 | 8.1:-77953228 | MS.gene89161:CDS |
| GGACACAAACAATCTCCAGA+TGG | 0.672446 | 8.1:+77943493 | None:intergenic |
| GGAAGGCTAGAAGAGGCGTG+TGG | 0.682147 | 8.1:-77952373 | MS.gene89161:CDS |
| ACAGATGACCTTAATGCTAG+CGG | 0.685378 | 8.1:-77950822 | MS.gene89161:intron |
| ACCTCCAAAAGGACACAGAG+AGG | 0.686576 | 8.1:+77952237 | None:intergenic |
| GTGTGTGGTACCTGTCAAAG+AGG | 0.687665 | 8.1:+77959090 | None:intergenic |
| CTAACCACTGGACTATCCTG+AGG | 0.691903 | 8.1:+77956221 | None:intergenic |
| TGTGCTTAGATATTTGCCCG+AGG | 0.702420 | 8.1:-77948538 | MS.gene89161:CDS |
| ATACAGGAAGAGAAACACAC+TGG | 0.703738 | 8.1:-77943594 | MS.gene89161:intron |
| TGTGCCTCAGGATAGTCCAG+TGG | 0.712691 | 8.1:-77956225 | MS.gene89161:CDS |
| AGAAGAGATGAAAGTTGTCG+TGG | 0.718554 | 8.1:+77951341 | None:intergenic |
| ATCATCTGAGGATCTCCATG+AGG | 0.722706 | 8.1:+77948585 | None:intergenic |
| ATAGAGGGCACTCGTCAGTG+TGG | 0.737049 | 8.1:+77943453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 77940757 | 77960659 | 77940757 | ID=MS.gene89161 |
| chr8.1 | mRNA | 77940757 | 77960659 | 77940757 | ID=MS.gene89161.t1;Parent=MS.gene89161 |
| chr8.1 | exon | 77960580 | 77960659 | 77960580 | ID=MS.gene89161.t1.exon1;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77960580 | 77960659 | 77960580 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77959101 | 77959459 | 77959101 | ID=MS.gene89161.t1.exon2;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77959101 | 77959459 | 77959101 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77958660 | 77958729 | 77958660 | ID=MS.gene89161.t1.exon3;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77958660 | 77958729 | 77958660 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77957195 | 77957310 | 77957195 | ID=MS.gene89161.t1.exon4;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77957195 | 77957310 | 77957195 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77956397 | 77956428 | 77956397 | ID=MS.gene89161.t1.exon5;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77956397 | 77956428 | 77956397 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77956183 | 77956308 | 77956183 | ID=MS.gene89161.t1.exon6;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77956183 | 77956308 | 77956183 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77953089 | 77953247 | 77953089 | ID=MS.gene89161.t1.exon7;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77953089 | 77953247 | 77953089 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77952351 | 77952443 | 77952351 | ID=MS.gene89161.t1.exon8;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77952351 | 77952443 | 77952351 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77952105 | 77952272 | 77952105 | ID=MS.gene89161.t1.exon9;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77952105 | 77952272 | 77952105 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77951840 | 77951935 | 77951840 | ID=MS.gene89161.t1.exon10;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77951840 | 77951935 | 77951840 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77951323 | 77951564 | 77951323 | ID=MS.gene89161.t1.exon11;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77951323 | 77951564 | 77951323 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77951188 | 77951245 | 77951188 | ID=MS.gene89161.t1.exon12;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77951188 | 77951245 | 77951188 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77950752 | 77950840 | 77950752 | ID=MS.gene89161.t1.exon13;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77950752 | 77950840 | 77950752 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77948471 | 77948608 | 77948471 | ID=MS.gene89161.t1.exon14;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77948471 | 77948608 | 77948471 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77948134 | 77948256 | 77948134 | ID=MS.gene89161.t1.exon15;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77948134 | 77948256 | 77948134 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77945025 | 77945123 | 77945025 | ID=MS.gene89161.t1.exon16;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77945025 | 77945123 | 77945025 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77944737 | 77944925 | 77944737 | ID=MS.gene89161.t1.exon17;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77944737 | 77944925 | 77944737 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77944024 | 77944198 | 77944024 | ID=MS.gene89161.t1.exon18;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77944024 | 77944198 | 77944024 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77943771 | 77943927 | 77943771 | ID=MS.gene89161.t1.exon19;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77943771 | 77943927 | 77943771 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77943411 | 77943610 | 77943411 | ID=MS.gene89161.t1.exon20;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77943411 | 77943610 | 77943411 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77942667 | 77942808 | 77942667 | ID=MS.gene89161.t1.exon21;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77942667 | 77942808 | 77942667 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77941744 | 77941904 | 77941744 | ID=MS.gene89161.t1.exon22;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77941744 | 77941904 | 77941744 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77941397 | 77941513 | 77941397 | ID=MS.gene89161.t1.exon23;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77941397 | 77941513 | 77941397 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| chr8.1 | exon | 77940757 | 77940816 | 77940757 | ID=MS.gene89161.t1.exon24;Parent=MS.gene89161.t1 |
| chr8.1 | CDS | 77940757 | 77940816 | 77940757 | ID=cds.MS.gene89161.t1;Parent=MS.gene89161.t1 |
| Gene Sequence |
| Protein sequence |
