Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89328.t1 | ACJ84726.1 | 95.4 | 263 | 12 | 0 | 1 | 263 | 1 | 263 | 1.50E-140 | 508.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89328.t1 | P50165 | 57.8 | 263 | 111 | 0 | 1 | 263 | 1 | 263 | 1.4e-83 | 310.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89328.t1 | B7FIZ7 | 95.4 | 263 | 12 | 0 | 1 | 263 | 1 | 263 | 1.1e-140 | 508.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053074 | MS.gene89328 | 0.81652 | 5.30E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89328.t1 | MTR_7g063330 | 95.437 | 263 | 12 | 0 | 1 | 263 | 1 | 263 | 0.0 | 526 |
| MS.gene89328.t1 | MTR_7g063390 | 75.472 | 265 | 63 | 2 | 1 | 263 | 1 | 265 | 1.66e-149 | 418 |
| MS.gene89328.t1 | MTR_7g063360 | 75.472 | 265 | 63 | 2 | 1 | 263 | 1 | 265 | 1.03e-146 | 411 |
| MS.gene89328.t1 | MTR_7g063320 | 76.046 | 263 | 62 | 1 | 1 | 262 | 1 | 263 | 2.57e-145 | 407 |
| MS.gene89328.t1 | MTR_7g063270 | 68.561 | 264 | 82 | 1 | 1 | 263 | 1 | 264 | 3.64e-138 | 389 |
| MS.gene89328.t1 | MTR_7g063260 | 69.057 | 265 | 80 | 2 | 1 | 263 | 1 | 265 | 5.17e-137 | 387 |
| MS.gene89328.t1 | MTR_3g068070 | 58.555 | 263 | 106 | 1 | 1 | 263 | 1 | 260 | 2.48e-109 | 317 |
| MS.gene89328.t1 | MTR_3g068155 | 56.489 | 262 | 111 | 1 | 2 | 263 | 6 | 264 | 1.44e-107 | 312 |
| MS.gene89328.t1 | MTR_4g064883 | 57.480 | 254 | 105 | 1 | 10 | 263 | 9 | 259 | 5.11e-105 | 306 |
| MS.gene89328.t1 | MTR_7g063270 | 57.197 | 264 | 63 | 2 | 1 | 263 | 1 | 215 | 1.27e-104 | 303 |
| MS.gene89328.t1 | MTR_3g068085 | 60.241 | 249 | 96 | 1 | 15 | 263 | 15 | 260 | 3.47e-104 | 303 |
| MS.gene89328.t1 | MTR_3g068175 | 57.143 | 252 | 105 | 1 | 12 | 263 | 14 | 262 | 4.25e-102 | 298 |
| MS.gene89328.t1 | MTR_3g068175 | 56.250 | 256 | 105 | 2 | 12 | 263 | 14 | 266 | 1.13e-99 | 292 |
| MS.gene89328.t1 | MTR_3g068065 | 58.233 | 249 | 101 | 1 | 15 | 263 | 17 | 262 | 7.06e-99 | 290 |
| MS.gene89328.t1 | MTR_4g064887 | 52.091 | 263 | 123 | 1 | 1 | 263 | 1 | 260 | 4.31e-97 | 285 |
| MS.gene89328.t1 | MTR_4g064883 | 58.000 | 200 | 84 | 0 | 10 | 209 | 9 | 208 | 8.40e-83 | 247 |
| MS.gene89328.t1 | MTR_4g064887 | 53.960 | 202 | 93 | 0 | 1 | 202 | 1 | 202 | 6.59e-75 | 228 |
| MS.gene89328.t1 | MTR_3g085740 | 30.400 | 250 | 154 | 7 | 21 | 262 | 81 | 318 | 2.49e-27 | 107 |
| MS.gene89328.t1 | MTR_4g132850 | 32.129 | 249 | 161 | 5 | 15 | 262 | 7 | 248 | 5.00e-27 | 105 |
| MS.gene89328.t1 | MTR_7g094510 | 30.980 | 255 | 163 | 7 | 15 | 262 | 6 | 254 | 3.72e-26 | 103 |
| MS.gene89328.t1 | MTR_7g094520 | 29.658 | 263 | 164 | 6 | 11 | 262 | 7 | 259 | 1.76e-24 | 99.0 |
| MS.gene89328.t1 | MTR_1196s0010 | 31.984 | 247 | 152 | 8 | 20 | 262 | 279 | 513 | 7.53e-23 | 97.4 |
| MS.gene89328.t1 | MTR_4g058810 | 29.572 | 257 | 169 | 7 | 15 | 263 | 11 | 263 | 1.37e-22 | 94.0 |
| MS.gene89328.t1 | MTR_4g058840 | 29.183 | 257 | 170 | 7 | 15 | 263 | 11 | 263 | 4.69e-22 | 92.8 |
| MS.gene89328.t1 | MTR_4g058820 | 29.183 | 257 | 170 | 7 | 15 | 263 | 11 | 263 | 4.69e-22 | 92.8 |
| MS.gene89328.t1 | MTR_8g442750 | 26.848 | 257 | 174 | 5 | 15 | 262 | 14 | 265 | 2.44e-20 | 88.6 |
| MS.gene89328.t1 | MTR_4g131740 | 28.906 | 256 | 167 | 6 | 15 | 261 | 40 | 289 | 5.01e-20 | 87.4 |
| MS.gene89328.t1 | MTR_6g023610 | 28.346 | 254 | 171 | 7 | 15 | 262 | 13 | 261 | 8.52e-20 | 86.7 |
| MS.gene89328.t1 | MTR_4g052350 | 29.961 | 257 | 160 | 9 | 15 | 263 | 14 | 258 | 4.19e-19 | 84.7 |
| MS.gene89328.t1 | MTR_7g071680 | 27.778 | 270 | 170 | 6 | 15 | 263 | 29 | 294 | 1.56e-18 | 83.6 |
| MS.gene89328.t1 | MTR_6g023590 | 28.063 | 253 | 173 | 7 | 15 | 262 | 13 | 261 | 1.74e-18 | 82.8 |
| MS.gene89328.t1 | MTR_7g107670 | 29.457 | 258 | 167 | 6 | 15 | 263 | 33 | 284 | 1.99e-18 | 83.2 |
| MS.gene89328.t1 | MTR_6g023990 | 28.063 | 253 | 173 | 7 | 15 | 262 | 14 | 262 | 3.93e-18 | 82.0 |
| MS.gene89328.t1 | MTR_4g052320 | 29.134 | 254 | 167 | 7 | 15 | 263 | 8 | 253 | 8.63e-18 | 80.9 |
| MS.gene89328.t1 | MTR_7g080410 | 29.032 | 186 | 126 | 4 | 22 | 202 | 45 | 229 | 2.47e-17 | 80.5 |
| MS.gene89328.t1 | MTR_4g052340 | 28.063 | 253 | 170 | 7 | 15 | 263 | 14 | 258 | 2.91e-17 | 79.7 |
| MS.gene89328.t1 | MTR_7g080410 | 29.032 | 186 | 126 | 4 | 22 | 202 | 45 | 229 | 2.95e-17 | 80.1 |
| MS.gene89328.t1 | MTR_1g068955 | 28.137 | 263 | 165 | 7 | 11 | 260 | 10 | 261 | 6.13e-17 | 79.0 |
| MS.gene89328.t1 | MTR_1g082760 | 26.172 | 256 | 173 | 7 | 15 | 261 | 40 | 288 | 6.44e-17 | 79.0 |
| MS.gene89328.t1 | MTR_8g089575 | 29.798 | 198 | 134 | 3 | 16 | 208 | 46 | 243 | 1.76e-16 | 77.8 |
| MS.gene89328.t1 | MTR_1g051165 | 26.316 | 266 | 180 | 8 | 11 | 263 | 9 | 271 | 2.16e-16 | 77.4 |
| MS.gene89328.t1 | MTR_7g083870 | 28.295 | 258 | 171 | 6 | 15 | 263 | 35 | 287 | 3.53e-16 | 77.0 |
| MS.gene89328.t1 | MTR_6g023950 | 27.586 | 261 | 164 | 7 | 15 | 262 | 13 | 261 | 5.64e-16 | 75.9 |
| MS.gene89328.t1 | MTR_6g023600 | 28.458 | 253 | 172 | 7 | 15 | 262 | 13 | 261 | 5.71e-16 | 75.9 |
| MS.gene89328.t1 | MTR_4g052300 | 28.125 | 256 | 166 | 10 | 15 | 263 | 8 | 252 | 6.24e-16 | 75.9 |
| MS.gene89328.t1 | MTR_7g113650 | 26.562 | 256 | 172 | 7 | 15 | 261 | 40 | 288 | 6.66e-16 | 76.3 |
| MS.gene89328.t1 | MTR_6g023910 | 26.104 | 249 | 173 | 7 | 20 | 262 | 18 | 261 | 9.90e-16 | 75.1 |
| MS.gene89328.t1 | MTR_7g105460 | 27.626 | 257 | 169 | 8 | 15 | 263 | 13 | 260 | 3.15e-15 | 73.9 |
| MS.gene89328.t1 | MTR_4g058830 | 31.847 | 157 | 98 | 5 | 112 | 263 | 57 | 209 | 5.20e-15 | 72.4 |
| MS.gene89328.t1 | MTR_6g023600 | 28.063 | 253 | 167 | 7 | 15 | 262 | 13 | 255 | 7.86e-14 | 69.7 |
| MS.gene89328.t1 | MTR_4g134660 | 27.273 | 220 | 147 | 5 | 19 | 226 | 10 | 228 | 8.85e-14 | 69.3 |
| MS.gene89328.t1 | MTR_3g086210 | 30.476 | 210 | 127 | 7 | 6 | 202 | 40 | 243 | 1.41e-13 | 69.7 |
| MS.gene89328.t1 | MTR_7g105590 | 28.571 | 189 | 128 | 5 | 15 | 200 | 8 | 192 | 2.53e-13 | 67.4 |
| MS.gene89328.t1 | MTR_3g020670 | 30.943 | 265 | 157 | 8 | 15 | 263 | 16 | 270 | 6.02e-13 | 67.4 |
| MS.gene89328.t1 | MTR_8g096620 | 28.761 | 226 | 146 | 8 | 17 | 232 | 47 | 267 | 2.71e-12 | 66.2 |
| MS.gene89328.t1 | MTR_4g078630 | 25.869 | 259 | 176 | 6 | 15 | 263 | 19 | 271 | 1.64e-11 | 63.5 |
| MS.gene89328.t1 | MTR_7g110130 | 27.737 | 274 | 156 | 10 | 11 | 263 | 2 | 254 | 1.69e-11 | 63.2 |
| MS.gene89328.t1 | MTR_7g105580 | 24.901 | 253 | 163 | 6 | 15 | 263 | 8 | 237 | 3.63e-11 | 62.0 |
| MS.gene89328.t1 | MTR_7g110140 | 27.863 | 262 | 168 | 9 | 12 | 263 | 3 | 253 | 5.72e-11 | 61.6 |
| MS.gene89328.t1 | MTR_7g110160 | 27.519 | 258 | 156 | 8 | 12 | 263 | 3 | 235 | 6.40e-11 | 61.2 |
| MS.gene89328.t1 | MTR_1579s0020 | 34.940 | 83 | 50 | 1 | 181 | 263 | 1 | 79 | 6.60e-11 | 57.8 |
| MS.gene89328.t1 | MTR_8g044240 | 28.643 | 199 | 126 | 7 | 21 | 207 | 75 | 269 | 6.74e-11 | 62.0 |
| MS.gene89328.t1 | MTR_3g087850 | 28.426 | 197 | 132 | 5 | 5 | 200 | 18 | 206 | 8.62e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89328.t1 | AT5G06060 | 57.087 | 254 | 106 | 1 | 10 | 263 | 4 | 254 | 3.80e-108 | 313 |
| MS.gene89328.t1 | AT1G07440 | 54.118 | 255 | 113 | 1 | 9 | 263 | 6 | 256 | 3.04e-99 | 291 |
| MS.gene89328.t1 | AT2G29260 | 54.941 | 253 | 111 | 1 | 11 | 263 | 64 | 313 | 1.09e-98 | 291 |
| MS.gene89328.t1 | AT2G29320 | 55.682 | 264 | 111 | 4 | 1 | 263 | 1 | 259 | 8.23e-98 | 287 |
| MS.gene89328.t1 | AT2G29290 | 54.331 | 254 | 113 | 1 | 10 | 263 | 2 | 252 | 6.59e-97 | 285 |
| MS.gene89328.t1 | AT2G29300 | 54.902 | 255 | 111 | 3 | 10 | 263 | 2 | 253 | 1.51e-96 | 284 |
| MS.gene89328.t1 | AT2G29340 | 54.724 | 254 | 112 | 1 | 10 | 263 | 2 | 252 | 2.58e-96 | 283 |
| MS.gene89328.t1 | AT2G29300 | 54.902 | 255 | 111 | 3 | 10 | 263 | 2 | 253 | 4.97e-96 | 283 |
| MS.gene89328.t1 | AT2G29330 | 54.724 | 254 | 112 | 2 | 10 | 263 | 2 | 252 | 6.59e-96 | 282 |
| MS.gene89328.t1 | AT2G29340 | 54.724 | 254 | 112 | 1 | 10 | 263 | 2 | 252 | 1.09e-95 | 283 |
| MS.gene89328.t1 | AT2G29310 | 55.118 | 254 | 111 | 1 | 10 | 263 | 2 | 252 | 2.39e-95 | 281 |
| MS.gene89328.t1 | AT2G29360 | 53.788 | 264 | 118 | 2 | 1 | 263 | 1 | 261 | 2.77e-95 | 281 |
| MS.gene89328.t1 | AT2G29150 | 55.344 | 262 | 112 | 4 | 1 | 261 | 1 | 258 | 1.36e-93 | 276 |
| MS.gene89328.t1 | AT2G30670 | 51.969 | 254 | 119 | 1 | 10 | 263 | 2 | 252 | 5.68e-93 | 275 |
| MS.gene89328.t1 | AT2G29350 | 54.118 | 255 | 113 | 1 | 9 | 263 | 9 | 259 | 8.16e-93 | 275 |
| MS.gene89328.t1 | AT1G07450 | 53.755 | 253 | 113 | 2 | 11 | 263 | 4 | 252 | 9.58e-93 | 274 |
| MS.gene89328.t1 | AT2G29370 | 53.876 | 258 | 115 | 2 | 7 | 263 | 7 | 261 | 2.37e-91 | 271 |
| MS.gene89328.t1 | AT2G29320 | 55.556 | 234 | 100 | 3 | 31 | 263 | 11 | 241 | 3.77e-86 | 257 |
| MS.gene89328.t1 | AT2G29290 | 52.586 | 232 | 107 | 1 | 32 | 263 | 7 | 235 | 4.76e-83 | 249 |
| MS.gene89328.t1 | AT2G29310 | 53.648 | 233 | 105 | 1 | 31 | 263 | 21 | 250 | 7.40e-82 | 246 |
| MS.gene89328.t1 | AT2G29350 | 52.232 | 224 | 103 | 1 | 40 | 263 | 2 | 221 | 4.72e-76 | 231 |
| MS.gene89328.t1 | AT2G29320 | 55.024 | 209 | 91 | 2 | 1 | 208 | 1 | 207 | 4.84e-76 | 230 |
| MS.gene89328.t1 | AT2G29350 | 58.247 | 194 | 81 | 0 | 9 | 202 | 9 | 202 | 7.00e-76 | 230 |
| MS.gene89328.t1 | AT2G29310 | 55.500 | 200 | 89 | 0 | 10 | 209 | 2 | 201 | 4.88e-75 | 227 |
| MS.gene89328.t1 | AT2G29340 | 54.500 | 200 | 91 | 0 | 10 | 209 | 2 | 201 | 5.26e-75 | 227 |
| MS.gene89328.t1 | AT2G29340 | 54.500 | 200 | 91 | 0 | 10 | 209 | 2 | 201 | 5.26e-75 | 227 |
| MS.gene89328.t1 | AT1G07440 | 57.927 | 164 | 69 | 0 | 9 | 172 | 6 | 169 | 3.33e-65 | 201 |
| MS.gene89328.t1 | AT2G29310 | 53.631 | 179 | 83 | 0 | 31 | 209 | 21 | 199 | 3.22e-61 | 192 |
| MS.gene89328.t1 | AT2G29170 | 59.804 | 102 | 40 | 1 | 1 | 101 | 1 | 102 | 5.35e-39 | 132 |
| MS.gene89328.t1 | AT3G03980 | 32.567 | 261 | 158 | 5 | 15 | 262 | 14 | 269 | 1.15e-32 | 120 |
| MS.gene89328.t1 | AT5G18210 | 31.907 | 257 | 163 | 5 | 14 | 262 | 7 | 259 | 1.18e-29 | 112 |
| MS.gene89328.t1 | AT4G13180 | 30.980 | 255 | 163 | 4 | 15 | 262 | 13 | 261 | 1.61e-27 | 107 |
| MS.gene89328.t1 | AT4G05530 | 32.400 | 250 | 159 | 6 | 15 | 262 | 9 | 250 | 3.66e-26 | 103 |
| MS.gene89328.t1 | AT1G24360 | 29.150 | 247 | 161 | 5 | 21 | 262 | 80 | 317 | 2.25e-25 | 102 |
| MS.gene89328.t1 | AT5G18210 | 31.128 | 257 | 152 | 6 | 14 | 262 | 7 | 246 | 5.53e-25 | 100 |
| MS.gene89328.t1 | AT3G05260 | 30.970 | 268 | 161 | 8 | 7 | 262 | 30 | 285 | 3.29e-24 | 99.0 |
| MS.gene89328.t1 | AT3G04000 | 31.154 | 260 | 162 | 4 | 15 | 261 | 14 | 269 | 6.29e-24 | 97.8 |
| MS.gene89328.t1 | AT3G55310 | 28.571 | 259 | 169 | 8 | 15 | 263 | 17 | 269 | 1.61e-21 | 91.3 |
| MS.gene89328.t1 | AT3G55290 | 29.389 | 262 | 163 | 9 | 15 | 263 | 18 | 270 | 1.88e-21 | 91.3 |
| MS.gene89328.t1 | AT3G55290 | 29.389 | 262 | 163 | 9 | 15 | 263 | 17 | 269 | 2.01e-21 | 91.3 |
| MS.gene89328.t1 | AT1G54870 | 28.125 | 256 | 168 | 7 | 15 | 261 | 82 | 330 | 6.10e-21 | 90.9 |
| MS.gene89328.t1 | AT1G54870 | 28.125 | 256 | 168 | 7 | 15 | 261 | 84 | 332 | 7.18e-21 | 90.5 |
| MS.gene89328.t1 | AT3G12800 | 26.357 | 258 | 175 | 6 | 15 | 262 | 10 | 262 | 4.02e-20 | 87.8 |
| MS.gene89328.t1 | AT3G26760 | 27.473 | 273 | 184 | 5 | 2 | 264 | 23 | 291 | 2.53e-19 | 85.9 |
| MS.gene89328.t1 | AT1G63380 | 27.519 | 258 | 174 | 8 | 15 | 263 | 19 | 272 | 6.10e-19 | 84.3 |
| MS.gene89328.t1 | AT1G63380 | 27.519 | 258 | 174 | 8 | 15 | 263 | 17 | 270 | 6.63e-19 | 84.3 |
| MS.gene89328.t1 | AT1G63380 | 27.519 | 258 | 174 | 8 | 15 | 263 | 15 | 268 | 7.13e-19 | 84.3 |
| MS.gene89328.t1 | AT1G63380 | 27.519 | 258 | 174 | 8 | 15 | 263 | 22 | 275 | 7.54e-19 | 84.3 |
| MS.gene89328.t1 | AT3G46170 | 28.077 | 260 | 169 | 8 | 15 | 263 | 26 | 278 | 2.09e-18 | 83.2 |
| MS.gene89328.t1 | AT1G62610 | 26.744 | 258 | 176 | 8 | 15 | 263 | 19 | 272 | 3.78e-18 | 82.4 |
| MS.gene89328.t1 | AT1G62610 | 26.744 | 258 | 176 | 8 | 15 | 263 | 14 | 267 | 3.94e-18 | 82.0 |
| MS.gene89328.t1 | AT1G62610 | 26.744 | 258 | 176 | 8 | 15 | 263 | 15 | 268 | 4.12e-18 | 82.0 |
| MS.gene89328.t1 | AT1G62610 | 26.744 | 258 | 176 | 8 | 15 | 263 | 13 | 266 | 4.21e-18 | 82.0 |
| MS.gene89328.t1 | AT3G47360 | 32.804 | 189 | 116 | 6 | 19 | 202 | 49 | 231 | 4.77e-18 | 82.4 |
| MS.gene89328.t1 | AT3G51680 | 28.195 | 266 | 172 | 7 | 15 | 263 | 32 | 295 | 2.46e-17 | 80.1 |
| MS.gene89328.t1 | AT2G17845 | 25.194 | 258 | 178 | 7 | 15 | 261 | 47 | 300 | 3.84e-17 | 79.7 |
| MS.gene89328.t1 | AT3G47350 | 31.606 | 193 | 117 | 8 | 17 | 202 | 46 | 230 | 5.91e-17 | 79.3 |
| MS.gene89328.t1 | AT3G47350 | 31.606 | 193 | 117 | 8 | 17 | 202 | 46 | 230 | 8.61e-17 | 79.0 |
| MS.gene89328.t1 | AT4G03140 | 26.562 | 256 | 177 | 6 | 15 | 263 | 78 | 329 | 2.24e-16 | 78.2 |
| MS.gene89328.t1 | AT5G50690 | 29.319 | 191 | 124 | 6 | 15 | 200 | 45 | 229 | 9.61e-16 | 75.1 |
| MS.gene89328.t1 | AT5G50590 | 29.319 | 191 | 124 | 6 | 15 | 200 | 45 | 229 | 9.61e-16 | 75.1 |
| MS.gene89328.t1 | AT1G10310 | 30.415 | 217 | 130 | 6 | 19 | 222 | 19 | 227 | 1.01e-15 | 74.7 |
| MS.gene89328.t1 | AT1G52340 | 30.370 | 270 | 157 | 10 | 15 | 264 | 18 | 276 | 1.49e-15 | 75.1 |
| MS.gene89328.t1 | AT3G03330 | 29.231 | 195 | 131 | 5 | 14 | 202 | 40 | 233 | 1.65e-15 | 75.5 |
| MS.gene89328.t1 | AT5G50690 | 29.319 | 191 | 124 | 6 | 15 | 200 | 45 | 229 | 2.00e-15 | 74.7 |
| MS.gene89328.t1 | AT5G50590 | 29.319 | 191 | 124 | 6 | 15 | 200 | 45 | 229 | 2.00e-15 | 74.7 |
| MS.gene89328.t1 | AT2G47130 | 27.273 | 253 | 174 | 7 | 15 | 263 | 6 | 252 | 9.16e-15 | 72.4 |
| MS.gene89328.t1 | AT1G67730 | 28.646 | 192 | 132 | 3 | 16 | 202 | 50 | 241 | 4.59e-14 | 71.2 |
| MS.gene89328.t1 | AT3G26770 | 25.681 | 257 | 179 | 5 | 15 | 263 | 41 | 293 | 4.61e-14 | 71.2 |
| MS.gene89328.t1 | AT3G06060 | 27.962 | 211 | 139 | 5 | 20 | 225 | 42 | 244 | 6.00e-14 | 70.9 |
| MS.gene89328.t1 | AT3G06060 | 27.962 | 211 | 139 | 5 | 20 | 225 | 59 | 261 | 8.62e-14 | 70.5 |
| MS.gene89328.t1 | AT2G47120 | 28.195 | 266 | 156 | 11 | 15 | 264 | 7 | 253 | 8.91e-13 | 67.0 |
| MS.gene89328.t1 | AT2G47120 | 28.195 | 266 | 156 | 11 | 15 | 264 | 6 | 252 | 1.01e-12 | 66.6 |
| MS.gene89328.t1 | AT5G04900 | 29.648 | 199 | 123 | 8 | 21 | 207 | 83 | 276 | 8.86e-12 | 64.7 |
| MS.gene89328.t1 | AT1G49670 | 29.327 | 208 | 126 | 8 | 17 | 208 | 6 | 208 | 1.29e-11 | 64.7 |
| MS.gene89328.t1 | AT1G49670 | 29.327 | 208 | 126 | 8 | 17 | 208 | 6 | 208 | 1.40e-11 | 64.7 |
| MS.gene89328.t1 | AT3G29260 | 26.538 | 260 | 167 | 7 | 15 | 263 | 6 | 252 | 7.51e-11 | 61.2 |
| MS.gene89328.t1 | AT5G10050 | 27.660 | 188 | 129 | 4 | 21 | 207 | 11 | 192 | 9.00e-11 | 61.2 |
Find 51 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTGGTGCATTGATTAA+TGG | 0.234202 | 7.3:+42070321 | None:intergenic |
| ATATTCCAATGCTATGTTCT+TGG | 0.241471 | 7.3:+42070306 | None:intergenic |
| GTGGAAGAGTTGGCAGAATT+TGG | 0.288532 | 7.3:-42072792 | MS.gene89328:CDS |
| ATAATAAAACATACCTTTAG+AGG | 0.312423 | 7.3:+42070445 | None:intergenic |
| CGTGCAAATGTTGTCGCACC+TGG | 0.331230 | 7.3:-42070268 | MS.gene89328:CDS |
| AAGAACATAGCATTGGAATA+TGG | 0.331460 | 7.3:-42070304 | MS.gene89328:CDS |
| CAGGCCTAAAATAGAAGATA+TGG | 0.345798 | 7.3:+42070499 | None:intergenic |
| ACCAAAGCTGATATGTCTTT+AGG | 0.346420 | 7.3:+42069399 | None:intergenic |
| AGATGATATTAACAAATGTT+TGG | 0.374991 | 7.3:-42072739 | MS.gene89328:CDS |
| TGAAGATGTGACAAATATAA+TGG | 0.380271 | 7.3:-42070603 | MS.gene89328:CDS |
| TCCATGACCTTCGGAGCATC+GGG | 0.387122 | 7.3:+42069462 | None:intergenic |
| GTATATTCTAGCATCGTCTT+AGG | 0.387261 | 7.3:+42070629 | None:intergenic |
| GGATACAATGCTCCCGTATC+CGG | 0.410786 | 7.3:+42070520 | None:intergenic |
| TTAACAAATGTTTGGAAGAG+TGG | 0.416511 | 7.3:-42072731 | MS.gene89328:CDS |
| ACCTAAAGACATATCAGCTT+TGG | 0.423637 | 7.3:-42069400 | MS.gene89328:CDS |
| GGTTGTGCCACACGACTGAT+AGG | 0.438269 | 7.3:+42069420 | None:intergenic |
| GTTGATGGAAACTGTTGCTT+CGG | 0.441499 | 7.3:-42072643 | MS.gene89328:CDS |
| TCTATTTATGCAGCCTCTAA+AGG | 0.448351 | 7.3:-42070458 | MS.gene89328:intron |
| TTCCATGACCTTCGGAGCAT+CGG | 0.452281 | 7.3:+42069461 | None:intergenic |
| ATCTGTTAGGTGAATAATGC+TGG | 0.454547 | 7.3:-42070662 | MS.gene89328:intron |
| ATCTGCAGCTATAATCTGTC+CGG | 0.490891 | 7.3:+42069341 | None:intergenic |
| ATCAATCAGGTATGCAATTG+TGG | 0.492239 | 7.3:-42072811 | MS.gene89328:intron |
| ACTGGTGGAACCCGAGGCAT+AGG | 0.496266 | 7.3:-42072929 | MS.gene89328:CDS |
| AACAAAGAGGAACAGATCTC+AGG | 0.503248 | 7.3:+42070480 | None:intergenic |
| ACTGTTGCTTCGGTCTTCGA+TGG | 0.504556 | 7.3:-42072633 | MS.gene89328:CDS |
| GAAGATGTGACAAATATAAT+GGG | 0.512454 | 7.3:-42070602 | MS.gene89328:CDS |
| ATTACAACTTCCATGACCTT+CGG | 0.518760 | 7.3:+42069453 | None:intergenic |
| AACGTGGTCATTACTGCCCC+AGG | 0.525729 | 7.3:+42070250 | None:intergenic |
| GAGAACTGACCCTATGCCTC+GGG | 0.531174 | 7.3:+42072919 | None:intergenic |
| GTATGCAATTGTGGAAGAGT+TGG | 0.535529 | 7.3:-42072802 | MS.gene89328:CDS |
| CCCCGATGCTCCGAAGGTCA+TGG | 0.541391 | 7.3:-42069463 | MS.gene89328:CDS |
| ATGCACCAAGAACATAGCAT+TGG | 0.554507 | 7.3:-42070311 | MS.gene89328:CDS |
| TTGGAAGAGTGGAAAGGCAA+AGG | 0.565426 | 7.3:-42072720 | MS.gene89328:CDS |
| GTGCAAATGTTGTCGCACCT+GGG | 0.574156 | 7.3:-42070267 | MS.gene89328:CDS |
| AGAGAACTGACCCTATGCCT+CGG | 0.576626 | 7.3:+42072918 | None:intergenic |
| CTGGTGGAACCCGAGGCATA+GGG | 0.587209 | 7.3:-42072928 | MS.gene89328:intron |
| CCAGCTGCTTCATATATCAC+CGG | 0.590790 | 7.3:-42069360 | MS.gene89328:CDS |
| GGAACACCCCGATGCTCCGA+AGG | 0.591459 | 7.3:-42069469 | MS.gene89328:CDS |
| CAGATTATAGCTGCAGATGG+TGG | 0.591683 | 7.3:-42069336 | MS.gene89328:CDS |
| TGCAAATGTTGTCGCACCTG+GGG | 0.595217 | 7.3:-42070266 | MS.gene89328:CDS |
| GGAATGACTGCTCTAGTGAC+TGG | 0.605058 | 7.3:-42072947 | MS.gene89328:CDS |
| CCGGTGATATATGAAGCAGC+TGG | 0.615845 | 7.3:+42069360 | None:intergenic |
| ATGACTGCTCTAGTGACTGG+TGG | 0.625303 | 7.3:-42072944 | MS.gene89328:CDS |
| CTAGTGACTGGTGGAACCCG+AGG | 0.631978 | 7.3:-42072935 | MS.gene89328:CDS |
| AAATGTTTGGAAGAGTGGAA+AGG | 0.633316 | 7.3:-42072726 | MS.gene89328:CDS |
| GGACAGATTATAGCTGCAGA+TGG | 0.635577 | 7.3:-42069339 | MS.gene89328:CDS |
| GGTGTGCAAGTTGACACAAA+TGG | 0.648867 | 7.3:+42070558 | None:intergenic |
| GCTGCATAAATAGAACAAAG+AGG | 0.663140 | 7.3:+42070467 | None:intergenic |
| TCAAACACCTATCAGTCGTG+TGG | 0.683164 | 7.3:-42069427 | MS.gene89328:CDS |
| TCTGTTAGGTGAATAATGCT+GGG | 0.689049 | 7.3:-42070661 | MS.gene89328:intron |
| CCATGACCTTCGGAGCATCG+GGG | 0.716783 | 7.3:+42069463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGACAATTAAAAAAAT+AGG | + | chr7.3:42069753-42069772 | None:intergenic | 10.0% |
| !! | CAAAATACTTAAAAAAAAAA+AGG | - | chr7.3:42070834-42070853 | MS.gene89328:intron | 10.0% |
| !! | TAAAAAATAAAATTGTTACT+AGG | + | chr7.3:42072785-42072804 | None:intergenic | 10.0% |
| !! | TTGGTAAAAATAATAATTAA+TGG | - | chr7.3:42071264-42071283 | MS.gene89328:intron | 10.0% |
| !!! | GCATATTTTATTTTAAAAAA+TGG | - | chr7.3:42071630-42071649 | MS.gene89328:intron | 10.0% |
| !! | AAATAGAATGAAATAATCAT+TGG | + | chr7.3:42070128-42070147 | None:intergenic | 15.0% |
| !! | AACTAAATATCTTTGATAAA+AGG | + | chr7.3:42071225-42071244 | None:intergenic | 15.0% |
| !! | AATGTTGACAAAAATTATAT+TGG | - | chr7.3:42071245-42071264 | MS.gene89328:intron | 15.0% |
| !! | ACTAATATTTGTCTATATAA+AGG | - | chr7.3:42070771-42070790 | MS.gene89328:intron | 15.0% |
| !! | ATTCTTCTACAAATTATTAT+AGG | - | chr7.3:42072828-42072847 | MS.gene89328:intron | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr7.3:42070002-42070021 | None:intergenic | 15.0% |
| !! | TAGTATACATGTATATTATA+AGG | - | chr7.3:42071920-42071939 | MS.gene89328:intron | 15.0% |
| !! | TATGTTATTATAAATAGCAA+CGG | + | chr7.3:42071088-42071107 | None:intergenic | 15.0% |
| !! | TCAAAATAGTCATATATTTA+AGG | + | chr7.3:42071124-42071143 | None:intergenic | 15.0% |
| !! | TGTATACTAGATTTAATAAA+AGG | + | chr7.3:42071909-42071928 | None:intergenic | 15.0% |
| !!! | CAGTTTTTTTTTTTTTTTGA+AGG | + | chr7.3:42070407-42070426 | None:intergenic | 15.0% |
| !!! | CATTTCAATTTTTTTACAAA+AGG | - | chr7.3:42070860-42070879 | MS.gene89328:intron | 15.0% |
| !!! | CTTTTGTAAAAAAATTGAAA+TGG | + | chr7.3:42070862-42070881 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGATTACTTTTTT+AGG | - | chr7.3:42070672-42070691 | MS.gene89328:intron | 15.0% |
| !!! | TACTTTTAATACATTGTTTA+AGG | + | chr7.3:42072667-42072686 | None:intergenic | 15.0% |
| !! | AAATCATCTTGCAAATAAAA+AGG | + | chr7.3:42070478-42070497 | None:intergenic | 20.0% |
| !! | ACAAAATTATCCTTCATTAA+TGG | - | chr7.3:42072397-42072416 | MS.gene89328:intron | 20.0% |
| !! | ACGATAGTATATTAATTACT+TGG | - | chr7.3:42070894-42070913 | MS.gene89328:intron | 20.0% |
| !! | AGATGATATTAACAAATGTT+TGG | - | chr7.3:42069579-42069598 | MS.gene89328:intron | 20.0% |
| !! | ATAATAAAACATACCTTTAG+AGG | + | chr7.3:42071876-42071895 | None:intergenic | 20.0% |
| !! | ATGATAAGGACATAAATATA+CGG | - | chr7.3:42070339-42070358 | MS.gene89328:intron | 20.0% |
| !! | ATGTGTAATTAATGTTGTAT+TGG | - | chr7.3:42072351-42072370 | MS.gene89328:intron | 20.0% |
| !! | GTTAAAACGTCATATAATTT+AGG | + | chr7.3:42072331-42072350 | None:intergenic | 20.0% |
| !! | TATATTTATGTCCTTATCAT+AGG | + | chr7.3:42070339-42070358 | None:intergenic | 20.0% |
| !! | TATGAAATTGATCTATGTAA+AGG | - | chr7.3:42071972-42071991 | MS.gene89328:intron | 20.0% |
| !! | TGAAACTAATATAGACAATT+TGG | - | chr7.3:42070530-42070549 | MS.gene89328:CDS | 20.0% |
| !! | TGACACTAATCATATAAATA+GGG | + | chr7.3:42071434-42071453 | None:intergenic | 20.0% |
| !! | TTGACACTAATCATATAAAT+AGG | + | chr7.3:42071435-42071454 | None:intergenic | 20.0% |
| !! | TTTATTTACCTATCAACAAA+CGG | - | chr7.3:42069824-42069843 | MS.gene89328:intron | 20.0% |
| !!! | AATTAGTTCTCTTATGTTTA+AGG | - | chr7.3:42072133-42072152 | MS.gene89328:intron | 20.0% |
| !!! | ACTTGGAGAAAAATATTTTA+AGG | - | chr7.3:42070911-42070930 | MS.gene89328:intron | 20.0% |
| !!! | CTTTTTTTGAATAATCAATC+AGG | - | chr7.3:42069494-42069513 | MS.gene89328:intron | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr7.3:42070080-42070099 | MS.gene89328:intron | 20.0% |
| !!! | TACTACGAATTTTCTAAAAA+TGG | - | chr7.3:42071061-42071080 | MS.gene89328:intron | 20.0% |
| !!! | TCTTTTCTTATATTTAAGAC+CGG | + | chr7.3:42070662-42070681 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr7.3:42070079-42070098 | MS.gene89328:intron | 20.0% |
| !!! | TTTAAGGTTCTTTTTTTCTA+GGG | - | chr7.3:42072149-42072168 | MS.gene89328:intron | 20.0% |
| !!! | TTTTCCTTCTATATTTATGT+CGG | - | chr7.3:42072697-42072716 | MS.gene89328:CDS | 20.0% |
| ! | AAACGTCATATAATTTAGGA+CGG | + | chr7.3:42072327-42072346 | None:intergenic | 25.0% |
| ! | AACTAATATAGACAATTTGG+AGG | - | chr7.3:42070533-42070552 | MS.gene89328:CDS | 25.0% |
| ! | ATGGAGTATATATATAGCTT+TGG | + | chr7.3:42072304-42072323 | None:intergenic | 25.0% |
| ! | CTTTCTTATACCATTAATGA+AGG | + | chr7.3:42072410-42072429 | None:intergenic | 25.0% |
| ! | GAAGATGTGACAAATATAAT+GGG | - | chr7.3:42071716-42071735 | MS.gene89328:intron | 25.0% |
| ! | GACACTAATCATATAAATAG+GGG | + | chr7.3:42071433-42071452 | None:intergenic | 25.0% |
| ! | TAAAAAATGGTTGATCTGTT+AGG | - | chr7.3:42071643-42071662 | MS.gene89328:intron | 25.0% |
| ! | TGAAGATGTGACAAATATAA+TGG | - | chr7.3:42071715-42071734 | MS.gene89328:intron | 25.0% |
| ! | TGAATTTCAAAGACCAAAAA+TGG | - | chr7.3:42069339-42069358 | MS.gene89328:CDS | 25.0% |
| ! | TGAGTTAGATTGTTTCAAAA+TGG | - | chr7.3:42070960-42070979 | MS.gene89328:intron | 25.0% |
| ! | TGATAAGGACATAAATATAC+GGG | - | chr7.3:42070340-42070359 | MS.gene89328:intron | 25.0% |
| ! | TTAATTAGTTGCCTATGATA+AGG | - | chr7.3:42070325-42070344 | MS.gene89328:CDS | 25.0% |
| ! | TTTGAAGAACAAAAATTCAG+AGG | - | chr7.3:42071139-42071158 | MS.gene89328:intron | 25.0% |
| !! | GTATCCATATCTTCTATTTT+AGG | - | chr7.3:42071815-42071834 | MS.gene89328:intron | 25.0% |
| !! | GTCAATTGAACAAGTTTTTA+TGG | - | chr7.3:42070608-42070627 | MS.gene89328:CDS | 25.0% |
| !! | TTGATAGCTTACAAACTTTA+AGG | - | chr7.3:42071473-42071492 | MS.gene89328:intron | 25.0% |
| !! | TTGTCTATATTAGTTTCAAG+TGG | + | chr7.3:42070528-42070547 | None:intergenic | 25.0% |
| !!! | AAGTGACACTCATTTTAAAA+CGG | - | chr7.3:42070171-42070190 | MS.gene89328:intron | 25.0% |
| !!! | GTTTAAGGTTCTTTTTTTCT+AGG | - | chr7.3:42072148-42072167 | MS.gene89328:intron | 25.0% |
| !!! | TTTAAAATGAGTGTCACTTT+AGG | + | chr7.3:42070170-42070189 | None:intergenic | 25.0% |
| AAAATTCAGAGGACTTGAAA+AGG | - | chr7.3:42071150-42071169 | MS.gene89328:intron | 30.0% | |
| AAACGACTTATAGTTTGAGA+CGG | - | chr7.3:42072537-42072556 | MS.gene89328:intron | 30.0% | |
| AAATTGTGTGAGAGAAAAGT+TGG | + | chr7.3:42070042-42070061 | None:intergenic | 30.0% | |
| AGAACCGACATAAATATAGA+AGG | + | chr7.3:42072704-42072723 | None:intergenic | 30.0% | |
| AGTGGGACTAATTAATAATG+TGG | + | chr7.3:42071553-42071572 | None:intergenic | 30.0% | |
| ATATTCCAATGCTATGTTCT+TGG | + | chr7.3:42072015-42072034 | None:intergenic | 30.0% | |
| GTTGTATTGGAAATGTAAAG+CGG | + | chr7.3:42069989-42070008 | None:intergenic | 30.0% | |
| TAGACAAATCCAAATCATGT+TGG | + | chr7.3:42071014-42071033 | None:intergenic | 30.0% | |
| TATCAACCATTTGAAAGTTG+AGG | + | chr7.3:42071459-42071478 | None:intergenic | 30.0% | |
| TATTTGTCTTTCCCTGTTTA+TGG | - | chr7.3:42069891-42069910 | MS.gene89328:intron | 30.0% | |
| TCTTTCACTCATGTTCAAAT+CGG | + | chr7.3:42070561-42070580 | None:intergenic | 30.0% | |
| TTAACAAATGTTTGGAAGAG+TGG | - | chr7.3:42069587-42069606 | MS.gene89328:intron | 30.0% | |
| ! | AAGAACATAGCATTGGAATA+TGG | - | chr7.3:42072014-42072033 | MS.gene89328:intron | 30.0% |
| ! | ATAACTTTTCGAATCTCCTT+CGG | + | chr7.3:42070449-42070468 | None:intergenic | 30.0% |
| ! | ATCTAGTCTATATTTGAGAC+CGG | - | chr7.3:42070714-42070733 | MS.gene89328:intron | 30.0% |
| ! | TTCTTATATTTAAGACCGGA+GGG | + | chr7.3:42070658-42070677 | None:intergenic | 30.0% |
| ! | TTTCCATCAACTTTTTACGT+TGG | + | chr7.3:42069666-42069685 | None:intergenic | 30.0% |
| ! | TTTCTTATATTTAAGACCGG+AGG | + | chr7.3:42070659-42070678 | None:intergenic | 30.0% |
| !! | ACGAAAGAGTTTTATCTACA+AGG | - | chr7.3:42071335-42071354 | MS.gene89328:intron | 30.0% |
| !! | AGTTTTATCTACAAGGATGA+AGG | - | chr7.3:42071342-42071361 | MS.gene89328:intron | 30.0% |
| !! | ATCCGGATTCTTTTAAAAGT+GGG | + | chr7.3:42071784-42071803 | None:intergenic | 30.0% |
| !! | CTTTTAAAAGAATCCGGATA+CGG | - | chr7.3:42071785-42071804 | MS.gene89328:intron | 30.0% |
| !! | GACTTTAAAATTCGAAAGAG+AGG | - | chr7.3:42071286-42071305 | MS.gene89328:intron | 30.0% |
| !! | TATCCGGATTCTTTTAAAAG+TGG | + | chr7.3:42071785-42071804 | None:intergenic | 30.0% |
| !! | TTTTAAAAGAATCCGGATAC+GGG | - | chr7.3:42071786-42071805 | MS.gene89328:intron | 30.0% |
| AAATGTTTGGAAGAGTGGAA+AGG | - | chr7.3:42069592-42069611 | MS.gene89328:intron | 35.0% | |
| AAGAGAGCAATAAATTGCTG+AGG | - | chr7.3:42072442-42072461 | MS.gene89328:intron | 35.0% | |
| ACCAAAGCTGATATGTCTTT+AGG | + | chr7.3:42072922-42072941 | None:intergenic | 35.0% | |
| ACCTAAAGACATATCAGCTT+TGG | - | chr7.3:42072918-42072937 | MS.gene89328:intron | 35.0% | |
| ACTATGTCGTCGATATTGTT+AGG | + | chr7.3:42070590-42070609 | None:intergenic | 35.0% | |
| AGGTCCAATAGAATAAGTAG+TGG | + | chr7.3:42071571-42071590 | None:intergenic | 35.0% | |
| AGTCCCACTACTTATTCTAT+TGG | - | chr7.3:42071564-42071583 | MS.gene89328:intron | 35.0% | |
| ATCAATCAGGTATGCAATTG+TGG | - | chr7.3:42069507-42069526 | MS.gene89328:intron | 35.0% | |
| ATCAGATGTTCAATACAACG+AGG | + | chr7.3:42071591-42071610 | None:intergenic | 35.0% | |
| ATCTGTTAGGTGAATAATGC+TGG | - | chr7.3:42071656-42071675 | MS.gene89328:intron | 35.0% | |
| ATTACAACTTCCATGACCTT+CGG | + | chr7.3:42072868-42072887 | None:intergenic | 35.0% | |
| ATTTACCTATCAACAAACGG+TGG | - | chr7.3:42069827-42069846 | MS.gene89328:intron | 35.0% | |
| ATTTGTCTTCCACCATAAAC+AGG | + | chr7.3:42069906-42069925 | None:intergenic | 35.0% | |
| CAAAATAGACTCCAAAAACG+TGG | + | chr7.3:42072087-42072106 | None:intergenic | 35.0% | |
| CAGGCCTAAAATAGAAGATA+TGG | + | chr7.3:42071822-42071841 | None:intergenic | 35.0% | |
| CGATATCTACCAACATGATT+TGG | - | chr7.3:42071002-42071021 | MS.gene89328:intron | 35.0% | |
| GATTGATGTCAACTCAACAT+GGG | - | chr7.3:42070211-42070230 | MS.gene89328:intron | 35.0% | |
| GCTGCATAAATAGAACAAAG+AGG | + | chr7.3:42071854-42071873 | None:intergenic | 35.0% | |
| GGTCCAATAGAATAAGTAGT+GGG | + | chr7.3:42071570-42071589 | None:intergenic | 35.0% | |
| GTATATTCTAGCATCGTCTT+AGG | + | chr7.3:42071692-42071711 | None:intergenic | 35.0% | |
| TAATCGACGACAAGTAAATG+AGG | - | chr7.3:42071503-42071522 | MS.gene89328:intron | 35.0% | |
| TATTCGATTAGACAGCTTTC+TGG | + | chr7.3:42072732-42072751 | None:intergenic | 35.0% | |
| TCTATTTATGCAGCCTCTAA+AGG | - | chr7.3:42071860-42071879 | MS.gene89328:intron | 35.0% | |
| TCTGTTAGGTGAATAATGCT+GGG | - | chr7.3:42071657-42071676 | MS.gene89328:intron | 35.0% | |
| TCTTATAGCATTAGCGCTTA+TGG | - | chr7.3:42072264-42072283 | MS.gene89328:intron | 35.0% | |
| TGACCAACGTAAAAAGTTGA+TGG | - | chr7.3:42069660-42069679 | MS.gene89328:intron | 35.0% | |
| TGATTGATGTCAACTCAACA+TGG | - | chr7.3:42070210-42070229 | MS.gene89328:intron | 35.0% | |
| TTTGTCTTCCACCATAAACA+GGG | + | chr7.3:42069905-42069924 | None:intergenic | 35.0% | |
| ! | ATTTTTAACCATACTCCCTC+CGG | - | chr7.3:42070640-42070659 | MS.gene89328:CDS | 35.0% |
| ! | GTCATATAATTTAGGACGGA+TGG | + | chr7.3:42072323-42072342 | None:intergenic | 35.0% |
| ! | TTCCATGAAGTGACCATTTT+TGG | + | chr7.3:42069355-42069374 | None:intergenic | 35.0% |
| ! | TTTATCCACCGTTTGTTGAT+AGG | + | chr7.3:42069835-42069854 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7.3:42069936-42069955 | None:intergenic | 35.0% |
| !! | CACCCACTTTTAAAAGAATC+CGG | - | chr7.3:42071779-42071798 | MS.gene89328:intron | 35.0% |
| !! | GTTCTTGGTGCATTGATTAA+TGG | + | chr7.3:42072000-42072019 | None:intergenic | 35.0% |
| !!! | CACGTTTTTGGAGTCTATTT+TGG | - | chr7.3:42072085-42072104 | MS.gene89328:intron | 35.0% |
| !!! | TGACACTCATTTTAAAACGG+AGG | - | chr7.3:42070174-42070193 | MS.gene89328:intron | 35.0% |
| AAAGTTGGAGAGGGTAAAGT+TGG | + | chr7.3:42070027-42070046 | None:intergenic | 40.0% | |
| AACAAAGAGGAACAGATCTC+AGG | + | chr7.3:42071841-42071860 | None:intergenic | 40.0% | |
| ACCCATCTTCCATCGATAAA+AGG | + | chr7.3:42070249-42070268 | None:intergenic | 40.0% | |
| ATCTGCAGCTATAATCTGTC+CGG | + | chr7.3:42072980-42072999 | None:intergenic | 40.0% | |
| ATGCACCAAGAACATAGCAT+TGG | - | chr7.3:42072007-42072026 | MS.gene89328:intron | 40.0% | |
| CCATCTTCCATCGATAAAAG+GGG | + | chr7.3:42070247-42070266 | None:intergenic | 40.0% | |
| CCCATCTTCCATCGATAAAA+GGG | + | chr7.3:42070248-42070267 | None:intergenic | 40.0% | |
| GACCAAAAATGGTCACTTCA+TGG | - | chr7.3:42069350-42069369 | MS.gene89328:CDS | 40.0% | |
| GTATGCAATTGTGGAAGAGT+TGG | - | chr7.3:42069516-42069535 | MS.gene89328:intron | 40.0% | |
| GTCAAGCCTCAACTTTCAAA+TGG | - | chr7.3:42071450-42071469 | MS.gene89328:intron | 40.0% | |
| TGTGAGAGAAAAGTTGGAGA+GGG | + | chr7.3:42070036-42070055 | None:intergenic | 40.0% | |
| TTCAGAGGACTTGAAAAGGT+TGG | - | chr7.3:42071154-42071173 | MS.gene89328:intron | 40.0% | |
| TTGTCTTTCCCTGTTTATGG+TGG | - | chr7.3:42069894-42069913 | MS.gene89328:intron | 40.0% | |
| ! | CCCTTTTATCGATGGAAGAT+GGG | - | chr7.3:42070245-42070264 | MS.gene89328:CDS | 40.0% |
| ! | GCAAAGGATTTTGTGTGACA+GGG | - | chr7.3:42069614-42069633 | MS.gene89328:intron | 40.0% |
| ! | GTTGATGGAAACTGTTGCTT+CGG | - | chr7.3:42069675-42069694 | MS.gene89328:intron | 40.0% |
| ! | TAGTCTATATTTGAGACCGG+AGG | - | chr7.3:42070717-42070736 | MS.gene89328:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7.3:42069932-42069951 | None:intergenic | 40.0% |
| CAGATTATAGCTGCAGATGG+TGG | - | chr7.3:42072982-42073001 | MS.gene89328:CDS | 45.0% | |
| CCAGCTGCTTCATATATCAC+CGG | - | chr7.3:42072958-42072977 | MS.gene89328:CDS | 45.0% | |
| GGACAGATTATAGCTGCAGA+TGG | - | chr7.3:42072979-42072998 | MS.gene89328:CDS | 45.0% | |
| GTGGAAGAGTTGGCAGAATT+TGG | - | chr7.3:42069526-42069545 | MS.gene89328:intron | 45.0% | |
| GTGTGAGAGAAAAGTTGGAG+AGG | + | chr7.3:42070037-42070056 | None:intergenic | 45.0% | |
| TCAAACACCTATCAGTCGTG+TGG | - | chr7.3:42072891-42072910 | MS.gene89328:intron | 45.0% | |
| TGTGTTAACAGCTACTCCTC+CGG | + | chr7.3:42070736-42070755 | None:intergenic | 45.0% | |
| TTCCATCGATAAAAGGGGAG+TGG | + | chr7.3:42070242-42070261 | None:intergenic | 45.0% | |
| TTGGAAGAGTGGAAAGGCAA+AGG | - | chr7.3:42069598-42069617 | MS.gene89328:intron | 45.0% | |
| ! | ATTTAAGACCGGAGGGAGTA+TGG | + | chr7.3:42070651-42070670 | None:intergenic | 45.0% |
| ! | CCCCTTTTATCGATGGAAGA+TGG | - | chr7.3:42070244-42070263 | MS.gene89328:CDS | 45.0% |
| ! | GGCAAAGGATTTTGTGTGAC+AGG | - | chr7.3:42069613-42069632 | MS.gene89328:intron | 45.0% |
| ! | GGCAGTAATGACCACGTTTT+TGG | - | chr7.3:42072073-42072092 | MS.gene89328:intron | 45.0% |
| ! | GGTGTGCAAGTTGACACAAA+TGG | + | chr7.3:42071763-42071782 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7.3:42069933-42069952 | None:intergenic | 45.0% |
| !! | ATTCTATTAAAATAATTAAA+AGG | - | chr7.3:42071036-42071055 | MS.gene89328:intron | 5.0% |
| !! | TACAATTTAATAAAATATTA+TGG | - | chr7.3:42071395-42071414 | MS.gene89328:intron | 5.0% |
| AGAGAACTGACCCTATGCCT+CGG | + | chr7.3:42069403-42069422 | None:intergenic | 50.0% | |
| AGCATTAGCGCTTATGGCAC+TGG | - | chr7.3:42072270-42072289 | MS.gene89328:intron | 50.0% | |
| AGGTAGCTCACGCTCTTGTT+AGG | - | chr7.3:42071523-42071542 | MS.gene89328:intron | 50.0% | |
| ATGACTGCTCTAGTGACTGG+TGG | - | chr7.3:42069374-42069393 | MS.gene89328:CDS | 50.0% | |
| CCGGTGATATATGAAGCAGC+TGG | + | chr7.3:42072961-42072980 | None:intergenic | 50.0% | |
| GGAATGACTGCTCTAGTGAC+TGG | - | chr7.3:42069371-42069390 | MS.gene89328:CDS | 50.0% | |
| GGATACAATGCTCCCGTATC+CGG | + | chr7.3:42071801-42071820 | None:intergenic | 50.0% | |
| GGTAGCTCACGCTCTTGTTA+GGG | - | chr7.3:42071524-42071543 | MS.gene89328:intron | 50.0% | |
| GTGCAAATGTTGTCGCACCT+GGG | - | chr7.3:42072051-42072070 | MS.gene89328:intron | 50.0% | |
| TGCAAATGTTGTCGCACCTG+GGG | - | chr7.3:42072052-42072071 | MS.gene89328:intron | 50.0% | |
| TTCCATGACCTTCGGAGCAT+CGG | + | chr7.3:42072860-42072879 | None:intergenic | 50.0% | |
| ! | ACTGTTGCTTCGGTCTTCGA+TGG | - | chr7.3:42069685-42069704 | MS.gene89328:intron | 50.0% |
| ! | CTCCACTCCCCTTTTATCGA+TGG | - | chr7.3:42070237-42070256 | MS.gene89328:CDS | 50.0% |
| AACGTGGTCATTACTGCCCC+AGG | + | chr7.3:42072071-42072090 | None:intergenic | 55.0% | |
| CGTGCAAATGTTGTCGCACC+TGG | - | chr7.3:42072050-42072069 | MS.gene89328:intron | 55.0% | |
| GAGAACTGACCCTATGCCTC+GGG | + | chr7.3:42069402-42069421 | None:intergenic | 55.0% | |
| GCTCTAGTGTTTGCGTCCGA+AGG | - | chr7.3:42070430-42070449 | MS.gene89328:intron | 55.0% | |
| GGTTGTGCCACACGACTGAT+AGG | + | chr7.3:42072901-42072920 | None:intergenic | 55.0% | |
| ! | TCCATGACCTTCGGAGCATC+GGG | + | chr7.3:42072859-42072878 | None:intergenic | 55.0% |
| ACTGGTGGAACCCGAGGCAT+AGG | - | chr7.3:42069389-42069408 | MS.gene89328:CDS | 60.0% | |
| CTAGTGACTGGTGGAACCCG+AGG | - | chr7.3:42069383-42069402 | MS.gene89328:CDS | 60.0% | |
| CTGGTGGAACCCGAGGCATA+GGG | - | chr7.3:42069390-42069409 | MS.gene89328:CDS | 60.0% | |
| !! | CCATGACCTTCGGAGCATCG+GGG | + | chr7.3:42072858-42072877 | None:intergenic | 60.0% |
| CCCCGATGCTCCGAAGGTCA+TGG | - | chr7.3:42072855-42072874 | MS.gene89328:intron | 65.0% | |
| GGAACACCCCGATGCTCCGA+AGG | - | chr7.3:42072849-42072868 | MS.gene89328:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 42069323 | 42073017 | 42069323 | ID=MS.gene89328 |
| chr7.3 | mRNA | 42069323 | 42073017 | 42069323 | ID=MS.gene89328.t1;Parent=MS.gene89328 |
| chr7.3 | exon | 42072929 | 42073017 | 42072929 | ID=MS.gene89328.t1.exon1;Parent=MS.gene89328.t1 |
| chr7.3 | CDS | 42072929 | 42073017 | 42072929 | ID=cds.MS.gene89328.t1;Parent=MS.gene89328.t1 |
| chr7.3 | exon | 42072617 | 42072824 | 42072617 | ID=MS.gene89328.t1.exon2;Parent=MS.gene89328.t1 |
| chr7.3 | CDS | 42072617 | 42072824 | 42072617 | ID=cds.MS.gene89328.t1;Parent=MS.gene89328.t1 |
| chr7.3 | exon | 42070459 | 42070675 | 42070459 | ID=MS.gene89328.t1.exon3;Parent=MS.gene89328.t1 |
| chr7.3 | CDS | 42070459 | 42070675 | 42070459 | ID=cds.MS.gene89328.t1;Parent=MS.gene89328.t1 |
| chr7.3 | exon | 42070234 | 42070346 | 42070234 | ID=MS.gene89328.t1.exon4;Parent=MS.gene89328.t1 |
| chr7.3 | CDS | 42070234 | 42070346 | 42070234 | ID=cds.MS.gene89328.t1;Parent=MS.gene89328.t1 |
| chr7.3 | exon | 42069323 | 42069490 | 42069323 | ID=MS.gene89328.t1.exon5;Parent=MS.gene89328.t1 |
| chr7.3 | CDS | 42069323 | 42069490 | 42069323 | ID=cds.MS.gene89328.t1;Parent=MS.gene89328.t1 |
| Gene Sequence |
| Protein sequence |
