AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053074


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053074.t1 MTR_6g004630 98.280 465 8 0 1 465 41 505 0.0 947
MS.gene053074.t1 MTR_6g004610 90.260 462 45 0 1 462 1 462 0.0 882
MS.gene053074.t1 MTR_6g004670 83.656 465 73 3 1 463 42 505 0.0 813
MS.gene053074.t1 MTR_6g004600 66.667 477 146 5 1 465 42 517 0.0 646
MS.gene053074.t1 MTR_6g004590 66.457 477 147 4 1 465 42 517 0.0 642
MS.gene053074.t1 MTR_8g088470 57.511 466 189 4 1 464 34 492 0.0 552
MS.gene053074.t1 MTR_7g033580 56.009 466 197 4 1 465 38 496 0.0 536
MS.gene053074.t1 MTR_7g033570 56.867 466 193 4 1 465 38 496 0.0 536
MS.gene053074.t1 MTR_1g036200 52.401 479 201 8 1 465 36 501 1.26e-169 487
MS.gene053074.t1 MTR_1g035790 52.008 473 213 7 1 465 38 504 4.31e-168 483
MS.gene053074.t1 MTR_1g035670 49.893 469 228 4 1 465 39 504 1.14e-167 482
MS.gene053074.t1 MTR_1g035750 50.529 473 223 5 1 465 38 507 7.04e-165 475
MS.gene053074.t1 MTR_1g036130 48.832 471 234 4 1 465 39 508 6.58e-162 467
MS.gene053074.t1 MTR_1g035760 49.041 469 209 5 1 465 39 481 1.63e-160 463
MS.gene053074.t1 MTR_1g050362 49.684 475 223 8 1 463 36 506 3.38e-160 463
MS.gene053074.t1 MTR_1g035580 49.263 475 218 7 1 465 37 498 4.87e-158 457
MS.gene053074.t1 MTR_1g036010 48.632 475 230 8 1 465 39 509 1.79e-157 456
MS.gene053074.t1 MTR_1g035940 48.632 475 229 9 2 465 39 509 3.29e-157 455
MS.gene053074.t1 MTR_1g035800 49.790 476 225 6 1 463 38 512 3.23e-156 453
MS.gene053074.t1 MTR_1g035830 48.626 473 233 7 1 465 39 509 6.92e-156 452
MS.gene053074.t1 MTR_1g036270 47.699 478 235 7 1 465 38 513 1.47e-155 451
MS.gene053074.t1 MTR_1g069715 49.752 404 191 6 47 440 1 402 1.04e-140 419
MS.gene053074.t1 MTR_1g035860 48.166 409 205 4 1 405 45 450 7.84e-137 403
MS.gene053074.t1 MTR_1g037560 39.655 464 264 6 12 463 84 543 9.37e-121 364
MS.gene053074.t1 MTR_1g037550 37.397 484 275 8 4 463 68 547 9.22e-111 338
MS.gene053074.t1 MTR_4g075110 37.526 477 279 8 2 464 79 550 5.69e-108 331
MS.gene053074.t1 MTR_8g030590 37.500 488 274 11 2 465 32 512 4.52e-106 325
MS.gene053074.t1 MTR_8g098435 35.744 484 283 10 2 465 32 507 2.39e-98 305
MS.gene053074.t1 MTR_5g070010 36.345 476 274 9 8 465 46 510 2.94e-97 302
MS.gene053074.t1 MTR_4g012320 60.748 214 83 1 253 465 12 225 1.87e-91 277
MS.gene053074.t1 MTR_3g080580 34.029 479 289 8 2 463 49 517 4.40e-90 284
MS.gene053074.t1 MTR_3g463060 34.737 475 283 9 3 465 45 504 8.37e-90 283
MS.gene053074.t1 MTR_7g096340 33.641 434 261 9 41 463 85 502 7.64e-86 272
MS.gene053074.t1 MTR_7g096320 33.102 432 266 8 41 463 86 503 6.20e-83 265
MS.gene053074.t1 MTR_7g029275 33.047 466 284 9 11 463 58 508 6.38e-83 265
MS.gene053074.t1 MTR_7g088330 33.537 492 273 16 2 463 41 508 2.91e-80 258
MS.gene053074.t1 MTR_1g070365 32.791 430 267 9 43 463 88 504 2.82e-79 255
MS.gene053074.t1 MTR_4g119660 31.902 489 294 10 3 463 38 515 4.03e-79 255
MS.gene053074.t1 MTR_1g060550 34.332 434 260 9 41 463 93 512 4.66e-79 255
MS.gene053074.t1 MTR_4g054920 31.545 466 285 11 14 463 69 516 1.12e-78 254
MS.gene053074.t1 MTR_1g070345 33.333 432 264 11 43 464 88 505 2.63e-78 253
MS.gene053074.t1 MTR_2g086040 31.429 455 289 8 12 463 64 498 1.17e-77 251
MS.gene053074.t1 MTR_5g019140 31.633 490 296 10 3 464 53 531 1.95e-77 251
MS.gene053074.t1 MTR_8g035860 33.333 447 272 12 6 439 51 484 2.31e-77 250
MS.gene053074.t1 MTR_1g102220 29.832 476 303 11 2 463 48 506 5.47e-76 246
MS.gene053074.t1 MTR_8g035780 35.802 405 233 10 41 429 82 475 9.34e-76 246
MS.gene053074.t1 MTR_8g035810 32.662 447 276 12 6 439 51 485 5.53e-75 244
MS.gene053074.t1 MTR_8g035820 33.557 447 271 12 6 439 51 484 8.69e-75 243
MS.gene053074.t1 MTR_7g406990 37.574 338 192 8 12 338 67 396 4.50e-69 227
MS.gene053074.t1 MTR_8g035680 26.964 471 315 11 6 463 58 512 4.06e-65 218
MS.gene053074.t1 MTR_8g035760 27.813 471 312 12 6 464 58 512 4.63e-64 215
MS.gene053074.t1 MTR_8g035810 32.203 413 255 12 6 405 51 451 2.20e-63 212
MS.gene053074.t1 MTR_8g035680 27.247 356 237 7 120 463 20 365 2.36e-50 175
MS.gene053074.t1 MTR_1g102210 28.869 336 198 6 129 455 49 352 2.74e-44 159
MS.gene053074.t1 MTR_1g070370 35.317 252 147 5 132 381 5 242 1.31e-43 154
MS.gene053074.t1 MTR_8g035810 30.904 343 215 10 6 336 51 383 1.34e-43 158
MS.gene053074.t1 MTR_7g079440 24.494 445 298 15 35 463 226 648 5.79e-31 126
MS.gene053074.t1 MTR_6g004570 63.462 104 27 3 202 294 1 104 1.23e-30 119
MS.gene053074.t1 MTR_6g084040 41.497 147 66 3 1 146 38 165 1.48e-29 114
MS.gene053074.t1 MTR_1g040110 47.321 112 56 1 88 196 56 167 1.90e-27 108
MS.gene053074.t1 MTR_5g009110 24.416 471 303 14 35 463 111 570 1.23e-26 113
MS.gene053074.t1 MTR_1g050590 44.538 119 63 2 209 326 2 118 3.47e-26 102
MS.gene053074.t1 MTR_7g079440 26.230 366 234 13 35 386 226 569 1.29e-24 107
MS.gene053074.t1 MTR_1g062190 23.636 440 301 13 39 463 120 539 8.75e-24 104
MS.gene053074.t1 MTR_5g009110 24.018 433 276 14 73 463 1 422 6.60e-23 100
MS.gene053074.t1 MTR_2g062670 34.320 169 99 3 130 297 66 223 1.84e-22 100
MS.gene053074.t1 MTR_1g101050 28.626 262 171 8 192 448 248 498 3.97e-22 99.4
MS.gene053074.t1 MTR_2g010250 27.444 266 186 6 204 463 241 505 4.64e-22 99.4
MS.gene053074.t1 MTR_1g101040 28.788 264 170 7 192 452 252 500 5.32e-22 99.0
MS.gene053074.t1 MTR_6g072490 29.600 250 160 7 204 448 262 500 1.08e-21 98.2
MS.gene053074.t1 MTR_7g006900 28.270 237 151 8 217 448 237 459 2.94e-21 96.7
MS.gene053074.t1 MTR_6g017325 28.696 230 148 7 217 443 273 489 3.53e-21 96.7
MS.gene053074.t1 MTR_2g010380 28.000 250 172 6 221 463 261 509 4.06e-21 96.3
MS.gene053074.t1 MTR_2g010330 24.433 397 265 11 84 463 129 507 7.42e-21 95.5
MS.gene053074.t1 MTR_2g061200 22.410 415 274 12 73 462 137 528 3.12e-20 94.0
MS.gene053074.t1 MTR_2g010290 29.389 262 164 9 218 463 276 532 3.13e-20 94.0
MS.gene053074.t1 MTR_5g009110 26.807 332 219 9 35 352 111 432 6.26e-20 92.4
MS.gene053074.t1 MTR_4g095050 25.589 297 202 7 131 424 173 453 1.23e-19 92.0
MS.gene053074.t1 MTR_6g008500 27.039 233 159 7 192 418 258 485 1.32e-19 92.0
MS.gene053074.t1 MTR_8g098565 27.437 277 167 9 218 463 233 506 1.37e-19 91.7
MS.gene053074.t1 MTR_5g070920 25.105 239 168 5 193 424 225 459 1.80e-19 91.3
MS.gene053074.t1 MTR_6g084900 25.100 251 163 6 202 442 1 236 2.76e-19 88.2
MS.gene053074.t1 MTR_4g113650 22.791 430 295 11 34 452 101 504 2.95e-19 90.9
MS.gene053074.t1 MTR_2g010320 28.226 248 164 6 225 463 261 503 2.96e-19 90.5
MS.gene053074.t1 MTR_0171s0030 26.459 257 175 8 187 436 139 388 3.54e-19 89.7
MS.gene053074.t1 MTR_5g034900 29.500 200 137 3 267 463 319 517 4.15e-19 90.1
MS.gene053074.t1 MTR_0025s0110 22.222 459 304 13 12 452 88 511 6.05e-19 89.7
MS.gene053074.t1 MTR_8g046580 39.216 102 59 2 338 438 193 292 6.44e-19 87.4
MS.gene053074.t1 MTR_4g089055 23.753 421 290 12 4 413 60 460 1.40e-18 88.6
MS.gene053074.t1 MTR_4g088195 26.148 283 188 9 177 445 208 483 1.46e-18 88.6
MS.gene053074.t1 MTR_1g015860 29.020 255 160 10 217 463 287 528 2.60e-18 87.8
MS.gene053074.t1 MTR_0147s0030 23.829 491 269 21 13 452 92 528 2.87e-18 87.8
MS.gene053074.t1 MTR_6g008530 26.639 244 164 6 197 432 257 493 3.31e-18 87.4
MS.gene053074.t1 MTR_7g012860 27.200 250 162 8 197 439 235 471 3.33e-18 87.4
MS.gene053074.t1 MTR_0287s0060 27.200 250 162 8 197 439 235 471 3.33e-18 87.4
MS.gene053074.t1 MTR_2g061750 29.255 188 110 5 38 207 12 194 4.79e-18 82.8
MS.gene053074.t1 MTR_4g088160 24.066 482 277 19 4 442 40 475 5.38e-18 87.0
MS.gene053074.t1 MTR_2g061740 29.255 188 110 5 38 207 12 194 5.70e-18 82.8
MS.gene053074.t1 MTR_8g042060 27.372 274 166 12 207 462 265 523 8.04e-18 86.3
MS.gene053074.t1 MTR_1g036140 44.565 92 49 1 212 303 69 158 8.29e-18 81.3
MS.gene053074.t1 MTR_2g010280 29.703 202 136 4 267 463 303 503 8.82e-18 86.3
MS.gene053074.t1 MTR_8g042060 27.372 274 166 12 207 462 229 487 8.96e-18 85.9
MS.gene053074.t1 MTR_7g012330 27.523 218 139 7 228 439 266 470 1.18e-17 85.9
MS.gene053074.t1 MTR_2g055430 22.059 476 313 18 10 465 81 518 1.26e-17 85.9
MS.gene053074.t1 MTR_3g025260 25.610 246 164 8 192 427 231 467 1.54e-17 85.5
MS.gene053074.t1 MTR_8g008530 28.037 214 139 4 254 462 315 518 1.70e-17 85.5
MS.gene053074.t1 MTR_2g072400 22.851 477 305 19 10 462 78 515 2.07e-17 85.1
MS.gene053074.t1 MTR_0181s0030 22.395 451 323 15 3 441 41 476 2.78e-17 84.7
MS.gene053074.t1 MTR_4g094775 24.615 325 224 9 108 429 147 453 2.83e-17 84.7
MS.gene053074.t1 MTR_8g104030 24.031 258 173 7 197 442 8 254 3.10e-17 82.4
MS.gene053074.t1 MTR_0171s0020 22.895 380 275 11 57 429 101 469 3.13e-17 84.3
MS.gene053074.t1 MTR_3g104560 27.755 245 160 8 226 463 167 401 3.40e-17 83.6
MS.gene053074.t1 MTR_3g093530 26.068 234 157 6 235 462 300 523 4.92e-17 84.0
MS.gene053074.t1 MTR_4g018800 22.727 308 229 7 130 432 186 489 5.85e-17 83.6
MS.gene053074.t1 MTR_3g104560 27.755 245 160 8 226 463 302 536 6.78e-17 83.6
MS.gene053074.t1 MTR_5g470730 24.878 205 143 4 193 389 225 426 7.17e-17 82.8
MS.gene053074.t1 MTR_8g042000 19.463 447 298 14 34 455 107 516 8.35e-17 83.2
MS.gene053074.t1 MTR_5g070830 23.643 258 180 6 193 442 335 583 8.39e-17 83.6
MS.gene053074.t1 MTR_6g008600 25.514 243 167 6 197 432 256 491 9.77e-17 83.2
MS.gene053074.t1 MTR_4g088170 25.606 289 182 10 177 444 208 484 9.87e-17 82.8
MS.gene053074.t1 MTR_8g104100 24.348 230 150 7 213 429 4 222 1.68e-16 79.7
MS.gene053074.t1 MTR_6g008620 26.786 224 156 6 192 411 249 468 1.99e-16 82.0
MS.gene053074.t1 MTR_5g070710 23.950 238 169 5 193 423 224 456 1.99e-16 82.0
MS.gene053074.t1 MTR_4g062510 24.024 333 222 9 144 452 175 500 2.62e-16 81.6
MS.gene053074.t1 MTR_1g023730 24.779 226 159 5 209 432 259 475 2.77e-16 81.6
MS.gene053074.t1 MTR_5g016410 25.589 297 201 9 131 424 170 449 3.07e-16 81.3
MS.gene053074.t1 MTR_4g077210 26.432 227 156 5 192 417 235 451 3.15e-16 81.3
MS.gene053074.t1 MTR_5g009110 26.531 294 192 9 73 352 1 284 3.43e-16 79.7
MS.gene053074.t1 MTR_2g055470 22.222 459 303 19 10 448 81 505 4.68e-16 80.9
MS.gene053074.t1 MTR_6g084770 23.438 256 171 6 197 439 233 476 4.75e-16 80.9
MS.gene053074.t1 MTR_7g103450 25.610 246 173 5 188 432 245 481 5.15e-16 80.9
MS.gene053074.t1 MTR_4g109470 23.529 391 254 15 73 442 111 477 6.24e-16 80.5
MS.gene053074.t1 MTR_5g094660 22.173 451 316 17 4 439 40 470 6.84e-16 80.5
MS.gene053074.t1 MTR_5g070690 23.673 245 175 5 193 429 223 463 6.88e-16 80.5
MS.gene053074.t1 MTR_5g070800 23.673 245 175 5 193 429 223 463 6.88e-16 80.5
MS.gene053074.t1 MTR_1g069200 24.370 238 173 4 204 441 260 490 7.43e-16 80.1
MS.gene053074.t1 MTR_4g071710 25.191 262 169 7 200 442 234 487 7.75e-16 80.1
MS.gene053074.t1 MTR_6g008430 25.197 254 173 9 192 439 245 487 1.00e-15 79.7
MS.gene053074.t1 MTR_6g008650 25.403 248 176 6 190 432 246 489 1.06e-15 79.7
MS.gene053074.t1 MTR_8g063280 25.000 256 178 7 217 463 248 498 1.09e-15 79.7
MS.gene053074.t1 MTR_6g008640 23.810 315 219 10 129 432 183 487 1.76e-15 79.0
MS.gene053074.t1 MTR_7g092600 21.134 388 242 9 81 429 111 473 1.89e-15 79.0
MS.gene053074.t1 MTR_2g062680 30.612 147 70 3 247 389 19 137 2.04e-15 75.1
MS.gene053074.t1 MTR_8g042020 23.188 276 197 7 194 462 255 522 2.39e-15 78.6
MS.gene053074.t1 MTR_1g091003 25.751 233 157 7 202 432 241 459 2.54e-15 78.6
MS.gene053074.t1 MTR_3g014880 25.506 247 174 7 192 432 248 490 2.82e-15 78.6
MS.gene053074.t1 MTR_0171s0010 23.873 377 241 15 75 429 119 471 2.96e-15 78.6
MS.gene053074.t1 MTR_1g103670 25.112 223 149 7 198 417 239 446 3.22e-15 78.2
MS.gene053074.t1 MTR_8g042040 26.515 264 164 10 207 462 265 506 3.23e-15 78.2
MS.gene053074.t1 MTR_2g010300 27.723 202 126 5 267 463 303 489 3.65e-15 78.2
MS.gene053074.t1 MTR_5g070700 24.793 242 164 7 193 423 225 459 3.69e-15 78.2
MS.gene053074.t1 MTR_3g025230 24.771 327 212 12 130 439 168 477 3.71e-15 78.2
MS.gene053074.t1 MTR_7g075610 26.316 247 162 6 202 442 245 477 3.83e-15 78.2
MS.gene053074.t1 MTR_4g089020 22.931 423 291 14 4 413 38 438 5.04e-15 77.4
MS.gene053074.t1 MTR_2g073480 28.780 205 130 7 219 418 170 363 5.55e-15 77.0
MS.gene053074.t1 MTR_4g088400 27.092 251 171 6 192 439 250 491 6.41e-15 77.4
MS.gene053074.t1 MTR_2g073440 30.097 206 124 8 219 417 237 429 8.91e-15 76.6
MS.gene053074.t1 MTR_5g091760 25.338 296 187 10 140 432 183 447 1.05e-14 76.6
MS.gene053074.t1 MTR_1g085680 20.915 459 287 16 34 460 99 513 1.19e-14 76.6
MS.gene053074.t1 MTR_5g007450 26.291 213 146 5 230 442 270 471 1.30e-14 76.3
MS.gene053074.t1 MTR_7g055793 28.837 215 129 7 251 452 263 466 1.46e-14 75.9
MS.gene053074.t1 MTR_7g028020 23.925 372 239 15 78 429 116 463 2.03e-14 75.9
MS.gene053074.t1 MTR_2g437840 24.742 291 199 7 131 418 170 443 2.06e-14 75.9
MS.gene053074.t1 MTR_7g055793 28.837 215 129 7 251 452 318 521 2.20e-14 75.9
MS.gene053074.t1 MTR_5g094550 23.735 257 177 8 189 439 228 471 2.24e-14 75.5
MS.gene053074.t1 MTR_7g075580 23.214 448 305 16 16 442 47 476 2.83e-14 75.1
MS.gene053074.t1 MTR_5g007460 26.009 223 153 5 213 432 227 440 2.85e-14 75.1
MS.gene053074.t1 MTR_5g070850 24.372 398 250 16 54 424 87 460 3.55e-14 75.1
MS.gene053074.t1 MTR_3g436390 25.641 234 162 6 193 422 231 456 3.89e-14 74.7
MS.gene053074.t1 MTR_7g079440 25.725 276 177 10 35 297 226 486 4.17e-14 74.7
MS.gene053074.t1 MTR_4g104610 27.027 185 128 4 229 413 269 446 4.46e-14 74.7
MS.gene053074.t1 MTR_8g027040 25.551 227 152 7 210 432 298 511 4.83e-14 74.7
MS.gene053074.t1 MTR_4g048580 22.652 362 253 11 74 429 121 461 5.41e-14 74.3
MS.gene053074.t1 MTR_3g024520 24.159 327 214 12 130 439 168 477 7.48e-14 73.9
MS.gene053074.t1 MTR_7g098550 24.034 466 276 18 10 444 70 488 9.32e-14 73.6
MS.gene053074.t1 MTR_7g098550 24.017 458 278 17 10 444 70 480 9.82e-14 73.6
MS.gene053074.t1 MTR_4g078110 24.887 221 158 5 220 439 235 448 1.13e-13 73.2
MS.gene053074.t1 MTR_7g027960 26.296 270 173 11 177 429 203 463 1.23e-13 73.2
MS.gene053074.t1 MTR_1g091010 27.513 189 123 6 231 417 267 443 1.47e-13 73.2
MS.gene053074.t1 MTR_1g091023 25.490 204 138 6 231 432 268 459 1.65e-13 72.8
MS.gene053074.t1 MTR_8g035790 34.694 98 62 2 367 463 1 97 1.72e-13 67.0
MS.gene053074.t1 MTR_6g042610 23.125 320 219 12 130 434 178 485 1.93e-13 72.8
MS.gene053074.t1 MTR_8g076290 23.932 234 160 8 192 413 223 450 1.98e-13 72.8
MS.gene053074.t1 MTR_1g031700 21.429 350 243 13 78 417 119 446 2.43e-13 72.4
MS.gene053074.t1 MTR_4g104540 28.571 161 110 3 253 413 221 376 2.82e-13 72.0
MS.gene053074.t1 MTR_1g037370 28.495 186 122 6 235 418 268 444 2.96e-13 72.0
MS.gene053074.t1 MTR_4g104570 30.000 150 100 3 264 413 1 145 3.29e-13 68.9
MS.gene053074.t1 MTR_4g088420 27.684 177 123 3 264 439 31 203 5.30e-13 68.9
MS.gene053074.t1 MTR_4g026200 23.868 243 175 6 199 441 237 469 6.03e-13 71.2
MS.gene053074.t1 MTR_5g007550 25.123 203 141 5 230 432 270 461 6.81e-13 70.9
MS.gene053074.t1 MTR_1g031710 26.733 202 129 8 217 417 67 250 9.46e-13 69.3
MS.gene053074.t1 MTR_2g031920 25.419 358 232 16 112 463 159 487 1.33e-12 70.1
MS.gene053074.t1 MTR_8g469360 26.639 244 158 7 224 452 184 421 1.65e-12 69.3
MS.gene053074.t1 MTR_4g025980 28.251 223 150 5 222 441 254 469 2.10e-12 69.3
MS.gene053074.t1 MTR_4g133750 23.457 243 169 6 207 442 245 477 2.35e-12 69.3
MS.gene053074.t1 MTR_4g088425 26.295 251 174 6 192 439 233 475 2.42e-12 69.3
MS.gene053074.t1 MTR_4g026030 24.254 268 186 9 178 441 63 317 3.07e-12 68.2
MS.gene053074.t1 MTR_4g088405 29.947 187 126 3 254 439 223 405 5.41e-12 67.8
MS.gene053074.t1 MTR_8g080520 22.543 346 244 11 126 464 198 526 5.51e-12 68.2
MS.gene053074.t1 MTR_8g469300 24.031 258 186 7 187 440 227 478 6.20e-12 68.2
MS.gene053074.t1 MTR_1750s0010 27.815 151 104 3 263 413 1 146 9.51e-12 63.5
MS.gene053074.t1 MTR_7g075540 21.978 455 294 15 16 439 47 471 9.82e-12 67.4
MS.gene053074.t1 MTR_5g018980 25.000 244 162 7 197 429 233 466 1.08e-11 67.4
MS.gene053074.t1 MTR_3g057970 24.797 246 162 8 192 429 222 452 3.09e-11 65.9
MS.gene053074.t1 MTR_3g058110 23.922 255 182 7 192 439 227 476 3.28e-11 65.9
MS.gene053074.t1 MTR_5g095290 22.353 255 180 7 191 439 229 471 3.95e-11 65.5
MS.gene053074.t1 MTR_6g035115 28.070 171 108 5 257 423 291 450 4.68e-11 65.1
MS.gene053074.t1 MTR_4g026080 25.989 177 124 4 264 439 1 171 5.78e-11 62.4
MS.gene053074.t1 MTR_1g097220 23.237 241 168 8 230 463 298 528 5.85e-11 65.1
MS.gene053074.t1 MTR_3g057980 23.182 220 145 6 212 422 246 450 5.94e-11 64.7
MS.gene053074.t1 MTR_3g058000 22.179 257 184 6 192 439 227 476 6.06e-11 64.7
MS.gene053074.t1 MTR_0608s0010 22.105 285 182 9 78 354 119 371 6.38e-11 64.3
MS.gene053074.t1 MTR_5g072980 21.149 383 259 15 75 439 116 473 6.47e-11 64.7
MS.gene053074.t1 MTR_5g072930 21.149 383 259 15 75 439 116 473 6.47e-11 64.7
MS.gene053074.t1 MTR_1g035660 33.613 119 60 5 120 235 17 119 7.15e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053074.t1 AT2G23180 45.666 473 247 4 1 464 42 513 1.19e-150 439
MS.gene053074.t1 AT4G39480 45.064 466 244 4 9 463 49 513 5.84e-147 429
MS.gene053074.t1 AT4G39490 46.122 477 242 4 1 463 41 516 2.37e-146 428
MS.gene053074.t1 AT4G39500 44.492 472 247 6 1 463 1 466 1.50e-144 422
MS.gene053074.t1 AT4G32170 44.111 467 254 4 1 463 40 503 3.76e-144 422
MS.gene053074.t1 AT4G39500 44.492 472 247 6 1 463 51 516 1.18e-143 421
MS.gene053074.t1 AT1G47620 44.776 469 251 4 1 463 49 515 7.74e-143 419
MS.gene053074.t1 AT2G21910 43.617 470 255 5 1 463 40 506 2.45e-139 410
MS.gene053074.t1 AT4G39510 44.374 471 249 6 1 463 40 505 9.08e-136 400
MS.gene053074.t1 AT5G52320 40.685 467 265 4 1 462 42 501 3.30e-133 394
MS.gene053074.t1 AT1G57750 41.631 466 259 4 1 463 41 496 1.37e-131 390
MS.gene053074.t1 AT5G52320 40.476 462 263 4 1 457 42 496 7.66e-131 388
MS.gene053074.t1 AT1G65340 40.171 468 267 4 1 462 42 502 1.84e-129 384
MS.gene053074.t1 AT5G02900 41.263 475 241 8 1 463 31 479 7.02e-120 359
MS.gene053074.t1 AT5G23190 36.910 466 277 7 12 465 82 542 2.77e-110 337
MS.gene053074.t1 AT1G63710 36.570 484 281 8 2 465 32 509 5.60e-107 327
MS.gene053074.t1 AT1G01600 37.090 488 279 9 2 465 32 515 1.08e-105 325
MS.gene053074.t1 AT1G24540 36.920 474 285 6 2 464 51 521 1.30e-105 324
MS.gene053074.t1 AT4G00360 37.037 486 280 9 2 465 32 513 8.45e-104 320
MS.gene053074.t1 AT5G08250 35.729 487 281 10 2 465 3 480 8.60e-104 318
MS.gene053074.t1 AT5G08250 35.729 487 281 10 2 465 65 542 2.62e-103 319
MS.gene053074.t1 AT1G57750 40.102 394 223 4 1 391 41 424 1.50e-102 313
MS.gene053074.t1 AT3G26125 36.421 475 279 6 12 465 62 534 1.19e-101 314
MS.gene053074.t1 AT2G45970 36.140 487 282 10 2 465 32 512 2.39e-101 313
MS.gene053074.t1 AT5G58860 36.575 473 277 8 5 463 45 508 2.56e-97 302
MS.gene053074.t1 AT1G13140 35.991 464 285 5 12 465 65 526 1.25e-95 298
MS.gene053074.t1 AT1G13150 35.197 483 290 6 4 465 39 519 9.60e-94 293
MS.gene053074.t1 AT1G13140 35.358 461 266 7 12 465 65 500 4.32e-92 288
MS.gene053074.t1 AT3G56630 33.895 475 288 12 4 463 35 498 1.33e-85 271
MS.gene053074.t1 AT1G34540 33.833 467 289 10 5 463 43 497 1.49e-85 271
MS.gene053074.t1 AT5G63450 34.491 432 263 6 41 464 84 503 9.73e-85 270
MS.gene053074.t1 AT2G27690 32.026 459 291 7 12 464 52 495 1.50e-84 268
MS.gene053074.t1 AT3G48520 31.897 464 295 6 8 464 51 500 2.77e-84 268
MS.gene053074.t1 AT5G63450 34.491 432 263 6 41 464 142 561 5.24e-84 269
MS.gene053074.t1 AT2G45510 32.548 467 288 12 2 455 47 499 4.18e-79 255
MS.gene053074.t1 AT2G44890 32.334 467 289 12 2 455 47 499 1.47e-75 246
MS.gene053074.t1 AT1G69500 31.412 503 286 12 3 463 38 523 2.32e-74 243
MS.gene053074.t1 AT3G01900 30.444 473 297 10 2 464 41 491 4.11e-71 234
MS.gene053074.t1 AT2G44890 31.116 466 278 12 2 455 47 481 1.85e-69 229
MS.gene053074.t1 AT3G53130 25.000 440 295 14 39 463 120 539 3.00e-29 120
MS.gene053074.t1 AT1G31800 23.928 443 303 13 35 463 147 569 2.13e-28 118
MS.gene053074.t1 AT5G52400 31.222 221 141 5 221 440 286 496 3.72e-23 102
MS.gene053074.t1 AT2G26710 24.724 453 299 17 9 452 81 500 7.67e-23 101
MS.gene053074.t1 AT5G51900 39.098 133 72 2 178 301 1 133 3.23e-22 95.9
MS.gene053074.t1 AT3G61040 30.837 227 145 7 217 442 255 470 6.31e-21 95.9
MS.gene053074.t1 AT4G13290 25.055 451 285 19 4 432 35 454 6.42e-21 95.9
MS.gene053074.t1 AT4G15110 23.319 476 303 19 35 463 118 578 9.13e-21 95.5
MS.gene053074.t1 AT3G14680 23.778 450 287 21 10 441 79 490 3.30e-20 93.6
MS.gene053074.t1 AT3G14650 22.857 455 285 20 10 441 79 490 7.97e-20 92.4
MS.gene053074.t1 AT5G24900 27.559 254 167 8 213 460 165 407 9.41e-20 91.7
MS.gene053074.t1 AT5G24900 26.190 252 173 6 213 460 282 524 1.20e-19 92.0
MS.gene053074.t1 AT4G13310 24.330 448 300 18 4 432 34 461 1.80e-19 91.3
MS.gene053074.t1 AT4G37340 25.862 290 192 10 131 417 171 440 2.28e-19 90.9
MS.gene053074.t1 AT3G48270 23.721 430 271 18 3 411 38 431 2.92e-19 90.5
MS.gene053074.t1 AT3G48300 22.296 453 303 19 3 438 36 456 3.26e-19 90.5
MS.gene053074.t1 AT3G48300 22.296 453 303 19 3 438 38 458 3.29e-19 90.5
MS.gene053074.t1 AT3G14660 22.026 454 290 19 10 441 79 490 3.46e-19 90.5
MS.gene053074.t1 AT3G14640 24.348 460 274 24 10 441 101 514 5.50e-19 90.1
MS.gene053074.t1 AT3G14640 24.348 460 274 24 10 441 79 492 6.15e-19 89.7
MS.gene053074.t1 AT1G13080 23.140 363 246 10 86 439 16 354 1.41e-18 87.8
MS.gene053074.t1 AT1G66030 36.975 119 66 3 6 123 53 163 1.42e-18 83.2
MS.gene053074.t1 AT4G37370 25.836 329 202 10 108 424 148 446 1.44e-18 88.6
MS.gene053074.t1 AT5G57260 26.074 326 208 12 103 411 134 443 1.89e-18 88.2
MS.gene053074.t1 AT1G13080 23.256 387 254 11 72 439 110 472 6.23e-18 86.7
MS.gene053074.t1 AT5G07990 24.803 254 182 6 193 442 228 476 1.24e-17 85.9
MS.gene053074.t1 AT2G24180 27.542 236 159 5 197 429 238 464 1.89e-17 85.1
MS.gene053074.t1 AT2G27000 25.000 376 241 14 82 440 129 480 2.05e-17 85.1
MS.gene053074.t1 AT2G30770 24.249 466 311 17 4 448 35 479 2.12e-17 85.1
MS.gene053074.t1 AT1G64940 27.638 199 139 3 267 463 313 508 2.65e-17 84.7
MS.gene053074.t1 AT5G38450 30.144 209 130 6 255 460 316 511 3.91e-17 84.3
MS.gene053074.t1 AT3G20940 22.611 429 295 13 12 421 55 465 4.79e-17 84.0
MS.gene053074.t1 AT2G45580 20.244 410 283 17 50 442 100 482 5.76e-17 83.6
MS.gene053074.t1 AT5G24910 22.565 421 260 17 73 463 148 532 1.01e-16 83.2
MS.gene053074.t1 AT5G06905 29.719 249 142 10 197 424 231 467 1.37e-16 82.4
MS.gene053074.t1 AT3G03470 25.869 259 180 6 214 463 254 509 1.58e-16 82.4
MS.gene053074.t1 AT2G46660 25.177 282 187 9 193 463 260 528 1.85e-16 82.4
MS.gene053074.t1 AT3G14660 26.210 248 157 10 204 441 113 344 2.44e-16 80.9
MS.gene053074.t1 AT3G20950 23.626 364 250 12 78 431 132 477 3.13e-16 81.6
MS.gene053074.t1 AT4G13770 27.679 224 138 6 229 442 264 473 3.54e-16 81.3
MS.gene053074.t1 AT3G20140 24.425 348 245 9 85 429 135 467 4.14e-16 81.3
MS.gene053074.t1 AT2G45580 23.868 243 170 8 204 442 97 328 5.08e-16 79.7
MS.gene053074.t1 AT1G64950 26.131 199 142 3 267 463 312 507 7.47e-16 80.1
MS.gene053074.t1 AT2G23190 25.490 306 205 9 115 417 199 484 7.53e-16 80.5
MS.gene053074.t1 AT1G66540 27.397 219 143 6 199 417 66 268 9.79e-16 78.6
MS.gene053074.t1 AT4G15350 23.743 358 240 14 85 429 128 465 1.13e-15 79.7
MS.gene053074.t1 AT2G27010 25.862 232 159 7 202 429 225 447 1.17e-15 79.7
MS.gene053074.t1 AT1G66540 27.397 219 143 6 199 417 125 327 1.61e-15 78.6
MS.gene053074.t1 AT1G50520 23.442 337 223 14 105 428 157 471 1.63e-15 79.3
MS.gene053074.t1 AT3G14610 26.984 252 151 11 204 441 258 490 2.92e-15 78.6
MS.gene053074.t1 AT2G23220 27.434 226 147 5 199 424 254 462 3.91e-15 78.2
MS.gene053074.t1 AT4G37330 26.496 234 154 7 184 417 222 437 4.09e-15 77.8
MS.gene053074.t1 AT3G28740 27.586 232 148 7 199 430 247 458 4.81e-15 77.8
MS.gene053074.t1 AT5G24950 24.762 210 143 5 228 432 261 460 5.76e-15 77.4
MS.gene053074.t1 AT5G35715 23.913 368 253 13 73 429 46 397 6.90e-15 77.0
MS.gene053074.t1 AT4G27710 21.111 450 315 14 10 443 74 499 7.15e-15 77.4
MS.gene053074.t1 AT3G26830 24.786 234 168 6 197 429 232 458 1.11e-14 76.6
MS.gene053074.t1 AT2G26170 25.751 233 165 7 235 463 210 438 1.16e-14 76.3
MS.gene053074.t1 AT3G48280 24.845 322 201 15 108 411 133 431 1.26e-14 76.3
MS.gene053074.t1 AT2G26170 26.210 248 173 8 222 463 278 521 1.37e-14 76.3
MS.gene053074.t1 AT1G11610 22.727 462 302 15 4 439 35 467 1.49e-14 76.3
MS.gene053074.t1 AT3G26270 25.316 237 164 5 197 429 236 463 1.60e-14 76.3
MS.gene053074.t1 AT4G37400 22.414 348 251 7 108 453 147 477 1.61e-14 76.3
MS.gene053074.t1 AT3G48310 20.444 450 303 17 3 432 39 453 1.96e-14 75.9
MS.gene053074.t1 AT1G11610 23.179 453 311 16 4 439 35 467 2.07e-14 75.9
MS.gene053074.t1 AT4G31950 23.904 251 181 6 193 437 231 477 2.63e-14 75.5
MS.gene053074.t1 AT3G48290 21.759 432 277 18 3 411 40 433 2.83e-14 75.5
MS.gene053074.t1 AT1G01190 26.126 222 149 6 234 450 305 516 4.08e-14 75.1
MS.gene053074.t1 AT1G01190 26.126 222 149 6 234 450 310 521 4.16e-14 75.1
MS.gene053074.t1 AT2G25160 26.457 223 143 7 199 411 247 458 4.43e-14 74.7
MS.gene053074.t1 AT4G15360 23.848 369 247 15 74 429 121 468 6.60e-14 74.3
MS.gene053074.t1 AT4G12310 24.906 265 189 5 197 456 246 505 7.17e-14 74.3
MS.gene053074.t1 AT2G12190 24.696 247 175 6 216 458 265 504 1.06e-13 73.6
MS.gene053074.t1 AT4G31940 23.171 246 180 5 197 437 248 489 1.69e-13 73.2
MS.gene053074.t1 AT4G39950 24.686 239 170 6 197 432 307 538 2.09e-13 72.8
MS.gene053074.t1 AT4G12300 23.043 230 171 3 226 453 271 496 2.21e-13 72.8
MS.gene053074.t1 AT4G39950 24.686 239 170 6 197 432 267 498 2.32e-13 72.8
MS.gene053074.t1 AT3G61880 23.695 249 168 8 193 432 260 495 3.35e-13 72.0
MS.gene053074.t1 AT4G37410 23.304 339 222 10 100 430 143 451 3.81e-13 71.6
MS.gene053074.t1 AT5G04330 21.739 253 186 6 197 442 231 478 4.04e-13 71.6
MS.gene053074.t1 AT5G57220 22.156 334 238 7 128 459 164 477 4.21e-13 71.6
MS.gene053074.t1 AT1G64930 25.123 203 145 4 265 463 309 508 4.22e-13 71.6
MS.gene053074.t1 AT4G12320 24.528 265 190 5 197 456 244 503 4.55e-13 71.6
MS.gene053074.t1 AT5G06900 21.654 254 189 5 183 436 222 465 5.26e-13 71.2
MS.gene053074.t1 AT3G61880 23.695 249 168 8 193 432 260 495 5.86e-13 71.2
MS.gene053074.t1 AT4G31500 21.862 247 187 3 197 442 231 472 6.46e-13 71.2
MS.gene053074.t1 AT4G20240 24.716 352 234 14 42 385 85 413 1.09e-12 70.1
MS.gene053074.t1 AT1G13090 21.096 365 266 13 73 429 108 458 1.24e-12 70.1
MS.gene053074.t1 AT2G46960 21.749 423 271 17 34 432 99 485 2.34e-12 69.3
MS.gene053074.t1 AT4G31970 23.171 246 180 5 197 437 247 488 2.74e-12 69.3
MS.gene053074.t1 AT1G67110 26.020 196 135 4 255 448 310 497 3.76e-12 68.6
MS.gene053074.t1 AT2G46960 26.829 205 132 8 235 432 176 369 4.09e-12 68.2
MS.gene053074.t1 AT5G04630 22.022 277 197 6 198 463 240 508 4.38e-12 68.6
MS.gene053074.t1 AT3G20110 22.543 346 236 11 85 421 132 454 4.55e-12 68.6
MS.gene053074.t1 AT3G26180 23.636 220 154 6 225 439 128 338 5.15e-12 67.8
MS.gene053074.t1 AT5G42590 23.045 243 180 4 197 439 232 467 6.14e-12 68.2
MS.gene053074.t1 AT2G46950 22.654 437 293 16 9 432 135 539 6.16e-12 68.2
MS.gene053074.t1 AT2G30750 25.571 219 150 5 218 432 251 460 6.20e-12 68.2
MS.gene053074.t1 AT3G26180 23.636 220 154 6 225 439 262 472 7.95e-12 67.8
MS.gene053074.t1 AT3G26150 21.212 231 170 4 213 439 250 472 1.21e-11 67.0
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 247 463 1.60e-11 66.6
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 247 463 1.60e-11 66.6
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MS.gene053074.t1 AT3G20080 24.779 226 155 6 200 419 110 326 1.67e-11 66.2
MS.gene053074.t1 AT3G20090 24.561 228 152 7 200 419 110 325 1.82e-11 66.2
MS.gene053074.t1 AT3G44250 22.703 370 254 11 73 429 108 458 1.94e-11 66.6
MS.gene053074.t1 AT4G37360 24.127 315 216 10 106 417 146 440 2.28e-11 66.2
MS.gene053074.t1 AT3G20090 25.000 228 151 7 200 419 248 463 2.89e-11 65.9
MS.gene053074.t1 AT5G09970 23.445 209 150 6 226 432 302 502 3.03e-11 65.9
MS.gene053074.t1 AT3G26200 23.032 343 236 12 105 439 147 469 3.22e-11 65.9
MS.gene053074.t1 AT5G36220 24.658 219 148 5 199 417 99 300 4.84e-11 64.7
MS.gene053074.t1 AT3G26310 26.667 195 122 6 225 411 258 439 5.23e-11 65.1
MS.gene053074.t1 AT1G13100 19.747 395 299 11 73 462 105 486 5.46e-11 65.1
MS.gene053074.t1 AT3G26170 22.273 220 157 6 225 439 262 472 5.64e-11 65.1
MS.gene053074.t1 AT2G02580 24.556 338 225 12 115 441 152 470 5.87e-11 65.1
MS.gene053074.t1 AT5G36220 24.658 219 148 5 199 417 245 446 5.89e-11 65.1
MS.gene053074.t1 AT3G61040 35.537 121 69 4 217 337 255 366 8.33e-11 63.9
MS.gene053074.t1 AT1G28430 27.149 221 143 8 216 429 260 469 9.29e-11 64.3

Find 85 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAGATTAAAGAAAATTT+TGG 0.148197 6.2:-608159 MS.gene053074:CDS
GAGAGAAAGCAAGCAATTAA+AGG 0.248200 6.2:-608030 MS.gene053074:CDS
ATTAATATTGAAAAGAAGTT+AGG 0.249511 6.2:-608132 MS.gene053074:CDS
ATAAAGTGCCTAAAAGTATT+TGG 0.249799 6.2:-608500 MS.gene053074:CDS
GTTTACCAGCATGAACTATT+TGG 0.255278 6.2:-608940 MS.gene053074:CDS
TTGTATTAGGATTAACAATA+TGG 0.260430 6.2:+607989 None:intergenic
TGCTGGACCTAGAACTTGTT+TGG 0.303612 6.2:-607827 MS.gene053074:CDS
TGGGGAGATTTGAAGAGATA+TGG 0.308634 6.2:-607942 MS.gene053074:CDS
CATGAGATATTTGAAGCCTT+TGG 0.310048 6.2:-608843 MS.gene053074:CDS
TGCTTTCTCTCAAAGGGTAT+TGG 0.318382 6.2:+608042 None:intergenic
AGAATATGCCTTCTTCGATT+TGG 0.319635 6.2:+608529 None:intergenic
TCCTTTCCCAAACAAGTTCT+AGG 0.335209 6.2:+607820 None:intergenic
AAATCAATGGAAAGACAATT+AGG 0.345217 6.2:+608582 None:intergenic
TATTGCTACACACCCTTTAG+TGG 0.359348 6.2:-608196 MS.gene053074:CDS
GAGAAGTTTGATTCCTTTGT+TGG 0.359539 6.2:-608700 MS.gene053074:CDS
TGAAGAATGGTTTGAAGGTT+AGG 0.363580 6.2:-607687 MS.gene053074:CDS
GGGCTATATGTGAAGCTCTA+AGG 0.366133 6.2:-608074 MS.gene053074:CDS
GATATGGGGAAAAGATTGTT+TGG 0.376603 6.2:-607926 MS.gene053074:CDS
CGAGGCAAGTTCCACAATAA+TGG 0.379155 6.2:+609032 None:intergenic
GCTGGACCTAGAACTTGTTT+GGG 0.381694 6.2:-607826 MS.gene053074:CDS
TGCATATACAAATTGATCAT+AGG 0.384677 6.2:+608419 None:intergenic
GGGGAGATTTGAAGAGATAT+GGG 0.397435 6.2:-607941 MS.gene053074:CDS
AAAAGCTAGTTTATCTTCAT+GGG 0.415064 6.2:-608095 MS.gene053074:CDS
TAGGAACACATGTGAGTTCA+TGG 0.415085 6.2:-608970 MS.gene053074:CDS
ACAATCGAATGGCTTAATAT+AGG 0.424668 6.2:+607718 None:intergenic
CAGAGACATGGAAATACAAT+AGG 0.424848 6.2:-608797 MS.gene053074:CDS
ATTGTTCTTCTCATGAAGAA+TGG 0.427552 6.2:-607700 MS.gene053074:CDS
GAATCTTAGCTTCCACTAAA+GGG 0.434801 6.2:+608184 None:intergenic
GCATTCAATCTCTTTGTAGC+GGG 0.437335 6.2:-608261 MS.gene053074:CDS
GCCTTCTCACATGCGACATC+AGG 0.439836 6.2:+608558 None:intergenic
AGAATCTTAGCTTCCACTAA+AGG 0.439883 6.2:+608183 None:intergenic
TTAATATTGAAAAGAAGTTA+GGG 0.441140 6.2:-608131 MS.gene053074:CDS
GTATTTCCATGTCTCTGAAT+CGG 0.444231 6.2:+608803 None:intergenic
AATATTTGTTCCGTAGTCCT+TGG 0.452032 6.2:-608612 MS.gene053074:CDS
TCTCATGAAGAATGGTTTGA+AGG 0.452138 6.2:-607692 MS.gene053074:CDS
CTATAACTTCAGCGCTTACA+TGG 0.457857 6.2:-608230 MS.gene053074:CDS
CTTTCAGATATCCATCTCTC+TGG 0.463966 6.2:+607895 None:intergenic
TTTCTCTCAAAGGGTATTGG+AGG 0.464054 6.2:+608045 None:intergenic
GAACATGACCATCCACTACT+TGG 0.470328 6.2:+607740 None:intergenic
ATTGCTTGCTTTCTCTCAAA+GGG 0.475212 6.2:+608036 None:intergenic
ATATTTGAAGCCTTTGGAGA+TGG 0.486237 6.2:-608837 MS.gene053074:CDS
AATTGCTTGCTTTCTCTCAA+AGG 0.492373 6.2:+608035 None:intergenic
AAGTTCATTAGTTATAATGC+TGG 0.493549 6.2:-607844 MS.gene053074:CDS
GCATGATAATACCATTATTG+TGG 0.500820 6.2:-609043 MS.gene053074:CDS
GAAAATCATTCAAAACAAGT+TGG 0.505159 6.2:-608724 MS.gene053074:CDS
CAACCACTGACCCTTGTTGT+CGG 0.506613 6.2:+608670 None:intergenic
CATGTGAGTTCATGGGACCT+TGG 0.507567 6.2:-608962 MS.gene053074:CDS
TGCGACATCAGGAAAATCAA+TGG 0.516368 6.2:+608569 None:intergenic
TAACATGTGATGCAAGTTGA+TGG 0.518161 6.2:+608905 None:intergenic
TCCTGATGTCGCATGTGAGA+AGG 0.528443 6.2:-608559 MS.gene053074:CDS
TGCAAATATTAAGTCAAAGA+GGG 0.529509 6.2:-608400 MS.gene053074:CDS
AGTGGAAGCTAAGATTCTTG+AGG 0.538509 6.2:-608178 MS.gene053074:CDS
TTGGATCATGTCCGACAACA+AGG 0.540828 6.2:-608681 MS.gene053074:CDS
AACTTTGATGAAAGAAGAGA+AGG 0.544814 6.2:-608328 MS.gene053074:CDS
TAACTAATGAACTTGTAAGA+TGG 0.546221 6.2:+607853 None:intergenic
ACCTAGAACTTGTTTGGGAA+AGG 0.559793 6.2:-607821 MS.gene053074:CDS
ATGCAAATATTAAGTCAAAG+AGG 0.567712 6.2:-608401 MS.gene053074:CDS
AACATGTGATGCAAGTTGAT+GGG 0.575489 6.2:+608906 None:intergenic
GTTGAATATTCCATCTCCAA+AGG 0.578090 6.2:+608827 None:intergenic
TGGAGTTCAAGCCAGAGAGA+TGG 0.583586 6.2:-607906 MS.gene053074:CDS
TGCATTCAATCTCTTTGTAG+CGG 0.586147 6.2:-608262 MS.gene053074:CDS
GACAATTAGGATCACATCCA+AGG 0.586200 6.2:+608595 None:intergenic
AGTTATTGAAACAACAACAT+AGG 0.587268 6.2:-608989 MS.gene053074:CDS
CAAATATTGTGTCCAAGTAG+TGG 0.596917 6.2:-607752 MS.gene053074:CDS
AGGATCACATCCAAGGACTA+CGG 0.600087 6.2:+608602 None:intergenic
GAGAGATGGATATCTGAAAG+AGG 0.600909 6.2:-607892 MS.gene053074:CDS
TCATGAGAAGAACAATCGAA+TGG 0.603388 6.2:+607707 None:intergenic
GGATTAACAATATGGCCACT+AGG 0.608204 6.2:+607997 None:intergenic
ACTTTGATGAAAGAAGAGAA+GGG 0.611137 6.2:-608327 MS.gene053074:CDS
TATTGTGTCCAAGTAGTGGA+TGG 0.615735 6.2:-607748 MS.gene053074:CDS
AGTGACCAAATAGTTCATGC+TGG 0.619583 6.2:+608935 None:intergenic
AAAGCTAGTTTATCTTCATG+GGG 0.622847 6.2:-608094 MS.gene053074:CDS
AGGAACACATGTGAGTTCAT+GGG 0.625807 6.2:-608969 MS.gene053074:CDS
CATTCAATCTCTTTGTAGCG+GGG 0.631176 6.2:-608260 MS.gene053074:CDS
TGTCCGACAACAAGGGTCAG+TGG 0.632974 6.2:-608673 MS.gene053074:CDS
AGATGGATATCTGAAAGAGG+AGG 0.633030 6.2:-607889 MS.gene053074:CDS
CTTTGATGAAAGAAGAGAAG+GGG 0.635301 6.2:-608326 MS.gene053074:CDS
TCAACACCGATTCAGAGACA+TGG 0.653719 6.2:-608809 MS.gene053074:CDS
GTTATGAAATCATGAACTCG+AGG 0.654252 6.2:+609014 None:intergenic
GGGAGATTTGAAGAGATATG+GGG 0.657198 6.2:-607940 MS.gene053074:CDS
ACATGTGATGCAAGTTGATG+GGG 0.662103 6.2:+608907 None:intergenic
TAGTTCATGCTGGTAAACCA+AGG 0.676905 6.2:+608945 None:intergenic
TGGATCATGTCCGACAACAA+GGG 0.683502 6.2:-608680 MS.gene053074:CDS
AAAGGTGATATACTTCCTAG+TGG 0.702478 6.2:-608012 MS.gene053074:CDS
TGTCGGACATGATCCAACAA+AGG 0.703258 6.2:+608687 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGTATTATTGTATT+AGG + chr6.2:608734-608753 None:intergenic 10.0%
!! ATGTAGAAAAAATAATGAAA+TGG - chr6.2:608343-608362 MS.gene053074:CDS 15.0%
!! ATTAATATTGAAAAGAAGTT+AGG - chr6.2:608575-608594 MS.gene053074:CDS 15.0%
!! TTAATATTGAAAAGAAGTTA+GGG - chr6.2:608576-608595 MS.gene053074:CDS 15.0%
!!! TAACTTCTTTTCAATATTAA+TGG + chr6.2:608576-608595 None:intergenic 15.0%
!! TTGTATTAGGATTAACAATA+TGG + chr6.2:608721-608740 None:intergenic 20.0%
!!! ACTATTTTTCTTGTATTCAA+TGG - chr6.2:608745-608764 MS.gene053074:CDS 20.0%
!!! AGGAGATTAAAGAAAATTTT+GGG - chr6.2:608549-608568 MS.gene053074:CDS 20.0%
!!! CTATTTTTCTTGTATTCAAT+GGG - chr6.2:608746-608765 MS.gene053074:CDS 20.0%
!!! TATTTTTCTTGTATTCAATG+GGG - chr6.2:608747-608766 MS.gene053074:CDS 20.0%
!!! TGTTTTGACAATTATGTTAA+GGG - chr6.2:607831-607850 MS.gene053074:CDS 20.0%
! AAATCAATGGAAAGACAATT+AGG + chr6.2:608128-608147 None:intergenic 25.0%
! AAGTTCATTAGTTATAATGC+TGG - chr6.2:608863-608882 MS.gene053074:CDS 25.0%
! AGTTATTGAAACAACAACAT+AGG - chr6.2:607718-607737 MS.gene053074:CDS 25.0%
! ATGCAAATATTAAGTCAAAG+AGG - chr6.2:608306-608325 MS.gene053074:CDS 25.0%
! GAAAATCATTCAAAACAAGT+TGG - chr6.2:607983-608002 MS.gene053074:CDS 25.0%
! TAACTAATGAACTTGTAAGA+TGG + chr6.2:608857-608876 None:intergenic 25.0%
! TGCAAATATTAAGTCAAAGA+GGG - chr6.2:608307-608326 MS.gene053074:CDS 25.0%
! TGCATATACAAATTGATCAT+AGG + chr6.2:608291-608310 None:intergenic 25.0%
!! AAAAAGCTAGTTTATCTTCA+TGG - chr6.2:608611-608630 MS.gene053074:CDS 25.0%
!! AAAAGCTAGTTTATCTTCAT+GGG - chr6.2:608612-608631 MS.gene053074:CDS 25.0%
!! GAGGAGATTAAAGAAAATTT+TGG - chr6.2:608548-608567 MS.gene053074:CDS 25.0%
!!! ATAAAGTGCCTAAAAGTATT+TGG - chr6.2:608207-608226 MS.gene053074:CDS 25.0%
!!! GTGTTTTGACAATTATGTTA+AGG - chr6.2:607830-607849 MS.gene053074:CDS 25.0%
AACTTTGATGAAAGAAGAGA+AGG - chr6.2:608379-608398 MS.gene053074:CDS 30.0%
ACAATCGAATGGCTTAATAT+AGG + chr6.2:608992-609011 None:intergenic 30.0%
ACTTTGATGAAAGAAGAGAA+GGG - chr6.2:608380-608399 MS.gene053074:CDS 30.0%
ATTGTTCTTCTCATGAAGAA+TGG - chr6.2:609007-609026 MS.gene053074:CDS 30.0%
GTATTTGGAAGTTGCAAAAA+TGG - chr6.2:608222-608241 MS.gene053074:CDS 30.0%
TGAAGAGAAAAATATGACCA+AGG - chr6.2:608256-608275 MS.gene053074:CDS 30.0%
TTGCAAAAATGGCTTCAAAT+TGG - chr6.2:608233-608252 MS.gene053074:CDS 30.0%
! AAAGCTAGTTTATCTTCATG+GGG - chr6.2:608613-608632 MS.gene053074:CDS 30.0%
! GCATGATGATAAGTTTTTGA+GGG - chr6.2:608418-608437 MS.gene053074:CDS 30.0%
! TGCAACTTCCAAATACTTTT+AGG + chr6.2:608218-608237 None:intergenic 30.0%
! TGCATGATGATAAGTTTTTG+AGG - chr6.2:608417-608436 MS.gene053074:CDS 30.0%
AAAGGTGATATACTTCCTAG+TGG - chr6.2:608695-608714 MS.gene053074:CDS 35.0%
AATATTTGTTCCGTAGTCCT+TGG - chr6.2:608095-608114 MS.gene053074:CDS 35.0%
AATTGCTTGCTTTCTCTCAA+AGG + chr6.2:608675-608694 None:intergenic 35.0%
AGAATATGCCTTCTTCGATT+TGG + chr6.2:608181-608200 None:intergenic 35.0%
AGAATCTTAGCTTCCACTAA+AGG + chr6.2:608527-608546 None:intergenic 35.0%
ATTGCTTGCTTTCTCTCAAA+GGG + chr6.2:608674-608693 None:intergenic 35.0%
CAAATATTGTGTCCAAGTAG+TGG - chr6.2:608955-608974 MS.gene053074:CDS 35.0%
CAGAGACATGGAAATACAAT+AGG - chr6.2:607910-607929 MS.gene053074:CDS 35.0%
CTTTGATGAAAGAAGAGAAG+GGG - chr6.2:608381-608400 MS.gene053074:CDS 35.0%
GAATCTTAGCTTCCACTAAA+GGG + chr6.2:608526-608545 None:intergenic 35.0%
GAGAAGTTTGATTCCTTTGT+TGG - chr6.2:608007-608026 MS.gene053074:CDS 35.0%
GAGAGAAAGCAAGCAATTAA+AGG - chr6.2:608677-608696 MS.gene053074:CDS 35.0%
GATATGGGGAAAAGATTGTT+TGG - chr6.2:608781-608800 MS.gene053074:CDS 35.0%
GTATTTCCATGTCTCTGAAT+CGG + chr6.2:607907-607926 None:intergenic 35.0%
GTTATGAAATCATGAACTCG+AGG + chr6.2:607696-607715 None:intergenic 35.0%
GTTGAATATTCCATCTCCAA+AGG + chr6.2:607883-607902 None:intergenic 35.0%
GTTTACCAGCATGAACTATT+TGG - chr6.2:607767-607786 MS.gene053074:CDS 35.0%
TCATGAGAAGAACAATCGAA+TGG + chr6.2:609003-609022 None:intergenic 35.0%
TCTCATGAAGAATGGTTTGA+AGG - chr6.2:609015-609034 MS.gene053074:CDS 35.0%
TGAAGAATGGTTTGAAGGTT+AGG - chr6.2:609020-609039 MS.gene053074:CDS 35.0%
TGCATTCAATCTCTTTGTAG+CGG - chr6.2:608445-608464 MS.gene053074:CDS 35.0%
! ATATTTGAAGCCTTTGGAGA+TGG - chr6.2:607870-607889 MS.gene053074:CDS 35.0%
! CATGAGATATTTGAAGCCTT+TGG - chr6.2:607864-607883 MS.gene053074:CDS 35.0%
! GCTTTTAACCAAATCGAAGA+AGG - chr6.2:608170-608189 MS.gene053074:CDS 35.0%
! TAACATGTGATGCAAGTTGA+TGG + chr6.2:607805-607824 None:intergenic 35.0%
!! AACATGTGATGCAAGTTGAT+GGG + chr6.2:607804-607823 None:intergenic 35.0%
AGATGGATATCTGAAAGAGG+AGG - chr6.2:608818-608837 MS.gene053074:CDS 40.0%
AGGAACACATGTGAGTTCAT+GGG - chr6.2:607738-607757 MS.gene053074:CDS 40.0%
AGTGACCAAATAGTTCATGC+TGG + chr6.2:607775-607794 None:intergenic 40.0%
AGTGGAAGCTAAGATTCTTG+AGG - chr6.2:608529-608548 MS.gene053074:CDS 40.0%
CATTCAATCTCTTTGTAGCG+GGG - chr6.2:608447-608466 MS.gene053074:CDS 40.0%
CTATAACTTCAGCGCTTACA+TGG - chr6.2:608477-608496 MS.gene053074:CDS 40.0%
CTTTCAGATATCCATCTCTC+TGG + chr6.2:608815-608834 None:intergenic 40.0%
GACAATTAGGATCACATCCA+AGG + chr6.2:608115-608134 None:intergenic 40.0%
GAGAGATGGATATCTGAAAG+AGG - chr6.2:608815-608834 MS.gene053074:CDS 40.0%
GCATTCAATCTCTTTGTAGC+GGG - chr6.2:608446-608465 MS.gene053074:CDS 40.0%
GGATTAACAATATGGCCACT+AGG + chr6.2:608713-608732 None:intergenic 40.0%
GGGAGATTTGAAGAGATATG+GGG - chr6.2:608767-608786 MS.gene053074:CDS 40.0%
GGGGAGATTTGAAGAGATAT+GGG - chr6.2:608766-608785 MS.gene053074:CDS 40.0%
TAGGAACACATGTGAGTTCA+TGG - chr6.2:607737-607756 MS.gene053074:CDS 40.0%
TAGTTCATGCTGGTAAACCA+AGG + chr6.2:607765-607784 None:intergenic 40.0%
TATTGCTACACACCCTTTAG+TGG - chr6.2:608511-608530 MS.gene053074:CDS 40.0%
TCCTTTCCCAAACAAGTTCT+AGG + chr6.2:608890-608909 None:intergenic 40.0%
TGCGACATCAGGAAAATCAA+TGG + chr6.2:608141-608160 None:intergenic 40.0%
TGGGGAGATTTGAAGAGATA+TGG - chr6.2:608765-608784 MS.gene053074:CDS 40.0%
! ACCTAGAACTTGTTTGGGAA+AGG - chr6.2:608886-608905 MS.gene053074:CDS 40.0%
! ATCATAGGTTTTGCATGCCT+TGG + chr6.2:608276-608295 None:intergenic 40.0%
! TATTGTGTCCAAGTAGTGGA+TGG - chr6.2:608959-608978 MS.gene053074:CDS 40.0%
! TGCTTTCTCTCAAAGGGTAT+TGG + chr6.2:608668-608687 None:intergenic 40.0%
!! ACATGTGATGCAAGTTGATG+GGG + chr6.2:607803-607822 None:intergenic 40.0%
!! TTTCTCTCAAAGGGTATTGG+AGG + chr6.2:608665-608684 None:intergenic 40.0%
AGGATCACATCCAAGGACTA+CGG + chr6.2:608108-608127 None:intergenic 45.0%
CGAGGCAAGTTCCACAATAA+TGG + chr6.2:607678-607697 None:intergenic 45.0%
GAACATGACCATCCACTACT+TGG + chr6.2:608970-608989 None:intergenic 45.0%
GGGCTATATGTGAAGCTCTA+AGG - chr6.2:608633-608652 MS.gene053074:CDS 45.0%
TGGATCATGTCCGACAACAA+GGG - chr6.2:608027-608046 MS.gene053074:CDS 45.0%
TGTCGGACATGATCCAACAA+AGG + chr6.2:608023-608042 None:intergenic 45.0%
TTGGATCATGTCCGACAACA+AGG - chr6.2:608026-608045 MS.gene053074:CDS 45.0%
! GCTGGACCTAGAACTTGTTT+GGG - chr6.2:608881-608900 MS.gene053074:CDS 45.0%
! TGCTGGACCTAGAACTTGTT+TGG - chr6.2:608880-608899 MS.gene053074:CDS 45.0%
!! TCAACACCGATTCAGAGACA+TGG - chr6.2:607898-607917 MS.gene053074:CDS 45.0%
CATGTGAGTTCATGGGACCT+TGG - chr6.2:607745-607764 MS.gene053074:CDS 50.0%
TCCTGATGTCGCATGTGAGA+AGG - chr6.2:608148-608167 MS.gene053074:CDS 50.0%
TGGAGTTCAAGCCAGAGAGA+TGG - chr6.2:608801-608820 MS.gene053074:CDS 50.0%
! CAACCACTGACCCTTGTTGT+CGG + chr6.2:608040-608059 None:intergenic 50.0%
GCCTTCTCACATGCGACATC+AGG + chr6.2:608152-608171 None:intergenic 55.0%
TGTCCGACAACAAGGGTCAG+TGG - chr6.2:608034-608053 MS.gene053074:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 607666 609063 607666 ID=MS.gene053074
chr6.2 mRNA 607666 609063 607666 ID=MS.gene053074.t1;Parent=MS.gene053074
chr6.2 exon 607666 609063 607666 ID=MS.gene053074.t1.exon1;Parent=MS.gene053074.t1
chr6.2 CDS 607666 609063 607666 ID=cds.MS.gene053074.t1;Parent=MS.gene053074.t1
Gene Sequence

>MS.gene053074

ATGATAATACCATTATTGTGGAACTTGCCTCGAGTTCATGATTTCATAACTCAGTTATTGAAACAACAACATAGGAACACATGTGAGTTCATGGGACCTTGGTTTACCAGCATGAACTATTTGGTCACTAGTGACCCCATCAACTTGCATCACATGTTAAGCAAGTGTTTTGACAATTATGTTAAGGGTCATGAATATCATGAGATATTTGAAGCCTTTGGAGATGGAATATTCAACACCGATTCAGAGACATGGAAATACAATAGGTCTCTTTTTCACTCTATTCTCAAACAAAGAGATTTTGAATTCTTTCAAAAGAAAATCATTCAAAACAAGTTGGAGAGAAGTTTGATTCCTTTGTTGGATCATGTCCGACAACAAGGGTCAGTGGTTGATTTACAAGATGTCTTCAATCGTTTCACATTCGACAATATTTGTTCCGTAGTCCTTGGATGTGATCCTAATTGTCTTTCCATTGATTTTCCTGATGTCGCATGTGAGAAGGCTTTTAACCAAATCGAAGAAGGCATATTCTATAGACATAAAGTGCCTAAAAGTATTTGGAAGTTGCAAAAATGGCTTCAAATTGGTGAAGAGAAAAATATGACCAAGGCATGCAAAACCTATGATCAATTTGTATATGCAAATATTAAGTCAAAGAGGGAAGAGCTAAGCAAATGTAGAAAAAATAATGAAATGGTTGATTTGCTAACAACTTTGATGAAAGAAGAGAAGGGGTCACAAGTAGTAATGCATGATGATAAGTTTTTGAGGGATGTTGCATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCAGCGCTTACATGGCTCTTCTATCTTATTGCTACACACCCTTTAGTGGAAGCTAAGATTCTTGAGGAGATTAAAGAAAATTTTGGGACCATTAATATTGAAAAGAAGTTAGGGATTGATGAGTTGAAAAAGCTAGTTTATCTTCATGGGGCTATATGTGAAGCTCTAAGGCTTTTTCCTCCAATACCCTTTGAGAGAAAGCAAGCAATTAAAGGTGATATACTTCCTAGTGGCCATATTGTTAATCCTAATACAATAATACTATTTTTCTTGTATTCAATGGGGAGATTTGAAGAGATATGGGGAAAAGATTGTTTGGAGTTCAAGCCAGAGAGATGGATATCTGAAAGAGGAGGCATTGTTCATATACCATCTTACAAGTTCATTAGTTATAATGCTGGACCTAGAACTTGTTTGGGAAAGGACTTGTCGTTCATTCAAATTAAGATGACAACAATTGCTATTTTGAGCAAATATTGTGTCCAAGTAGTGGATGGTCATGTTCCTATATTAAGCCATTCGATTGTTCTTCTCATGAAGAATGGTTTGAAGGTTAGGATAACAAAAAGAGAAATTTGA

Protein sequence

>MS.gene053074.t1

MIIPLLWNLPRVHDFITQLLKQQHRNTCEFMGPWFTSMNYLVTSDPINLHHMLSKCFDNYVKGHEYHEIFEAFGDGIFNTDSETWKYNRSLFHSILKQRDFEFFQKKIIQNKLERSLIPLLDHVRQQGSVVDLQDVFNRFTFDNICSVVLGCDPNCLSIDFPDVACEKAFNQIEEGIFYRHKVPKSIWKLQKWLQIGEEKNMTKACKTYDQFVYANIKSKREELSKCRKNNEMVDLLTTLMKEEKGSQVVMHDDKFLRDVAFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGIDELKKLVYLHGAICEALRLFPPIPFERKQAIKGDILPSGHIVNPNTIILFFLYSMGRFEEIWGKDCLEFKPERWISERGGIVHIPSYKFISYNAGPRTCLGKDLSFIQIKMTTIAILSKYCVQVVDGHVPILSHSIVLLMKNGLKVRITKREI