AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89385

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89385.t1 MTR_2g008220 72.611 471 127 2 1 470 1 470 0.0 722
MS.gene89385.t1 MTR_2g008225 72.068 469 129 2 3 470 4 471 0.0 719
MS.gene89385.t1 MTR_6g036650 67.521 468 148 3 6 470 10 476 0.0 654
MS.gene89385.t1 MTR_2g046620 65.401 474 153 7 1 470 1 467 0.0 638
MS.gene89385.t1 MTR_6g042310 65.812 468 150 6 6 470 9 469 0.0 625
MS.gene89385.t1 MTR_4g123553 62.658 474 165 6 1 470 1 466 0.0 617
MS.gene89385.t1 MTR_4g077960 66.000 450 144 6 23 470 1 443 0.0 605
MS.gene89385.t1 MTR_3g435310 56.604 477 148 8 1 470 1 425 0.0 523
MS.gene89385.t1 MTR_2g008226 53.846 468 199 8 10 464 6 469 1.30e-180 514
MS.gene89385.t1 MTR_8g068330 39.394 462 263 8 8 458 2 457 4.31e-116 349
MS.gene89385.t1 MTR_8g068360 38.608 474 267 8 1 461 1 463 2.82e-115 347
MS.gene89385.t1 MTR_8g068340 38.055 473 266 10 1 458 1 461 1.79e-109 332
MS.gene89385.t1 MTR_7g067330 37.748 453 249 7 7 458 2 422 5.21e-103 314
MS.gene89385.t1 MTR_7g067120 37.748 453 249 7 7 458 2 422 2.63e-100 307
MS.gene89385.t1 MTR_8g007650 36.876 461 275 10 13 461 6 462 6.57e-96 297
MS.gene89385.t1 MTR_8g007565 36.659 461 276 10 13 461 6 462 3.67e-95 295
MS.gene89385.t1 MTR_5g066410 35.637 463 255 12 17 461 1 438 1.56e-82 262
MS.gene89385.t1 MTR_4g079270 34.105 475 274 17 8 463 2 456 2.87e-68 225
MS.gene89385.t1 MTR_4g079250 35.084 476 264 19 10 463 4 456 3.95e-67 222
MS.gene89385.t1 MTR_2g014900 31.545 466 283 14 13 461 6 452 4.02e-62 209
MS.gene89385.t1 MTR_1g090270 30.000 480 293 12 3 461 4 461 9.00e-58 197
MS.gene89385.t1 MTR_2g083430 31.102 463 294 14 12 462 6 455 1.66e-52 184
MS.gene89385.t1 MTR_2g083480 30.687 466 300 13 8 462 2 455 6.20e-50 177
MS.gene89385.t1 MTR_2g083380 31.723 476 274 17 13 463 24 473 1.14e-48 174
MS.gene89385.t1 MTR_2g083490 31.144 472 282 17 13 463 7 456 1.73e-48 173
MS.gene89385.t1 MTR_2g083420 29.095 464 286 16 8 462 2 431 2.21e-45 164
MS.gene89385.t1 MTR_4g031800 28.540 459 288 15 10 442 5 449 2.16e-43 159
MS.gene89385.t1 MTR_2g083390 27.586 464 293 16 8 462 2 431 1.66e-42 156
MS.gene89385.t1 MTR_4g485630 26.681 461 297 15 10 443 5 451 7.94e-39 147
MS.gene89385.t1 MTR_5g045960 28.358 469 288 17 11 443 6 462 4.26e-38 145
MS.gene89385.t1 MTR_7g102450 27.233 459 285 16 14 443 11 449 6.50e-37 142
MS.gene89385.t1 MTR_8g066610 27.626 514 302 20 1 469 1 489 1.33e-35 138
MS.gene89385.t1 MTR_7g102460 29.638 442 255 20 13 415 8 432 1.34e-35 138
MS.gene89385.t1 MTR_2g035020 27.273 473 281 18 11 442 8 458 7.90e-35 136
MS.gene89385.t1 MTR_1g107350 27.389 471 307 15 12 456 6 467 1.08e-34 135
MS.gene89385.t1 MTR_7g102490 29.797 443 255 18 13 415 8 434 2.58e-34 135
MS.gene89385.t1 MTR_7g117405 27.571 457 291 15 14 443 12 455 3.71e-34 134
MS.gene89385.t1 MTR_4g117980 25.424 472 291 15 11 442 8 458 4.13e-34 134
MS.gene89385.t1 MTR_8g009055 27.646 463 282 16 11 442 3 443 6.56e-34 133
MS.gene89385.t1 MTR_3g479520 27.706 462 284 16 14 442 15 459 6.97e-34 133
MS.gene89385.t1 MTR_0536s0010 25.000 476 293 16 2 443 9 454 1.92e-33 132
MS.gene89385.t1 MTR_6g023665 27.876 452 283 13 15 441 14 447 4.62e-33 130
MS.gene89385.t1 MTR_5g035560 25.793 473 296 15 10 458 7 448 5.18e-33 131
MS.gene89385.t1 MTR_4g059370 30.816 331 204 12 144 461 70 388 5.88e-33 129
MS.gene89385.t1 MTR_2g034990 26.424 439 271 14 11 417 8 426 6.84e-33 130
MS.gene89385.t1 MTR_3g008010 26.915 483 282 19 4 443 1 455 1.29e-32 129
MS.gene89385.t1 MTR_8g032950 24.897 486 285 16 7 442 2 457 1.77e-32 129
MS.gene89385.t1 MTR_0009s0240 27.561 410 268 10 10 403 3 399 1.83e-32 129
MS.gene89385.t1 MTR_4g117960 26.013 469 293 19 10 442 7 457 3.21e-32 129
MS.gene89385.t1 MTR_3g049970 27.004 474 305 15 12 456 7 468 6.69e-32 127
MS.gene89385.t1 MTR_7g070780 26.151 478 292 19 4 440 1 458 6.77e-32 128
MS.gene89385.t1 MTR_4g117950 24.401 459 302 12 10 443 2 440 8.60e-32 127
MS.gene89385.t1 MTR_5g087620 26.695 472 300 18 7 441 3 465 9.97e-32 127
MS.gene89385.t1 MTR_7g070800 28.040 403 260 12 13 396 5 396 1.06e-31 127
MS.gene89385.t1 MTR_3g079480 28.387 465 267 19 14 437 21 460 1.08e-31 127
MS.gene89385.t1 MTR_8g006220 27.352 457 256 17 15 425 7 433 1.37e-31 127
MS.gene89385.t1 MTR_1g107375 27.311 476 284 15 13 456 7 452 1.63e-31 126
MS.gene89385.t1 MTR_0036s0220 28.833 437 262 16 14 415 12 434 2.14e-31 126
MS.gene89385.t1 MTR_7g071040 26.403 481 296 17 3 443 6 468 3.77e-31 125
MS.gene89385.t1 MTR_5g045970 27.331 472 290 18 13 455 15 462 7.60e-31 125
MS.gene89385.t1 MTR_7g070930 28.054 442 269 15 1 412 1 423 9.96e-31 124
MS.gene89385.t1 MTR_6g488280 26.898 461 276 14 15 441 7 440 9.99e-31 124
MS.gene89385.t1 MTR_0428s0010 26.898 461 276 14 15 441 7 440 9.99e-31 124
MS.gene89385.t1 MTR_7g102550 27.368 475 300 17 14 456 9 470 1.09e-30 124
MS.gene89385.t1 MTR_4g485590 28.079 406 243 13 14 404 9 380 1.29e-30 123
MS.gene89385.t1 MTR_1g107315 27.079 469 307 14 14 456 8 467 1.66e-30 124
MS.gene89385.t1 MTR_8g009050 27.195 467 279 17 11 442 3 443 1.95e-30 123
MS.gene89385.t1 MTR_5g035580 24.845 483 298 17 4 455 3 451 3.46e-30 122
MS.gene89385.t1 MTR_8g008990 28.450 471 270 19 11 442 3 445 4.90e-30 122
MS.gene89385.t1 MTR_7g070860 27.228 404 254 14 10 396 3 383 5.07e-30 122
MS.gene89385.t1 MTR_8g064870 25.000 496 323 13 7 468 4 484 8.65e-30 121
MS.gene89385.t1 MTR_8g465670 27.790 439 269 17 15 425 8 426 1.10e-29 121
MS.gene89385.t1 MTR_7g071050 25.567 485 283 18 1 462 1 430 1.19e-29 120
MS.gene89385.t1 MTR_7g070610 26.752 471 287 18 13 443 12 464 2.43e-29 120
MS.gene89385.t1 MTR_1g032490 26.439 469 312 14 13 456 9 469 2.81e-29 120
MS.gene89385.t1 MTR_1g019510 25.926 459 294 14 11 443 3 441 2.96e-29 120
MS.gene89385.t1 MTR_8g071070 28.741 421 259 15 10 403 3 409 3.13e-29 120
MS.gene89385.t1 MTR_7g102560 27.505 469 283 20 13 441 8 459 3.16e-29 120
MS.gene89385.t1 MTR_8g009063 24.947 473 300 14 3 443 2 451 3.62e-29 120
MS.gene89385.t1 MTR_1g062380 26.593 455 293 15 13 434 15 461 3.96e-29 120
MS.gene89385.t1 MTR_4g024020 29.318 440 262 21 13 415 8 435 4.37e-29 120
MS.gene89385.t1 MTR_5g067170 21.413 467 314 9 11 442 8 456 4.96e-29 119
MS.gene89385.t1 MTR_8g006730 25.370 473 280 18 10 441 2 442 5.64e-29 119
MS.gene89385.t1 MTR_7g012120 24.359 468 298 17 11 442 13 460 9.40e-29 119
MS.gene89385.t1 MTR_5g029800 24.171 422 278 13 10 407 7 410 9.61e-29 119
MS.gene89385.t1 MTR_6g014220 25.630 476 286 16 9 442 5 454 9.61e-29 118
MS.gene89385.t1 MTR_1g107285 25.941 478 300 16 12 456 6 462 1.17e-28 118
MS.gene89385.t1 MTR_6g038240 24.336 452 292 15 7 437 4 426 1.55e-28 117
MS.gene89385.t1 MTR_7g117170 26.261 476 304 13 12 457 13 471 2.07e-28 117
MS.gene89385.t1 MTR_1g107365 26.526 475 292 19 12 456 43 490 2.29e-28 117
MS.gene89385.t1 MTR_8g027870 27.434 452 291 12 12 443 16 450 2.60e-28 117
MS.gene89385.t1 MTR_4g117890 23.881 469 301 16 7 442 6 451 3.05e-28 117
MS.gene89385.t1 MTR_5g464810 27.880 434 256 19 14 409 12 426 3.27e-28 117
MS.gene89385.t1 MTR_5g064240 27.880 434 256 19 14 409 12 426 3.27e-28 117
MS.gene89385.t1 MTR_6g038230 23.554 484 320 17 4 464 1 457 4.71e-28 116
MS.gene89385.t1 MTR_5g464760 28.668 443 267 17 1 409 1 428 5.57e-28 116
MS.gene89385.t1 MTR_7g070660 25.417 480 289 20 4 440 1 454 7.35e-28 116
MS.gene89385.t1 MTR_7g102520 27.861 402 250 12 13 387 11 399 8.59e-28 116
MS.gene89385.t1 MTR_6g014290 24.893 466 302 16 9 442 5 454 8.81e-28 115
MS.gene89385.t1 MTR_6g013440 25.316 474 290 16 10 442 7 457 1.22e-27 115
MS.gene89385.t1 MTR_8g009073 24.051 474 291 11 11 446 3 445 1.28e-27 115
MS.gene89385.t1 MTR_6g035185 24.145 468 309 17 11 447 8 460 1.78e-27 115
MS.gene89385.t1 MTR_3g479470 27.861 402 253 12 14 387 13 405 2.01e-27 115
MS.gene89385.t1 MTR_0078s0060 26.013 469 296 15 11 448 3 451 2.23e-27 114
MS.gene89385.t1 MTR_4g118000 26.214 412 258 15 11 403 9 393 2.31e-27 114
MS.gene89385.t1 MTR_7g070910 26.340 429 256 14 4 396 1 405 2.76e-27 114
MS.gene89385.t1 MTR_0078s0010 25.764 458 292 16 11 440 3 440 2.99e-27 114
MS.gene89385.t1 MTR_7g055710 27.294 436 242 20 4 396 1 404 3.25e-27 114
MS.gene89385.t1 MTR_8g027885 27.373 453 290 13 12 443 16 450 3.37e-27 114
MS.gene89385.t1 MTR_0184s0040 26.754 456 290 14 11 440 18 455 3.55e-27 114
MS.gene89385.t1 MTR_0078s0190 26.754 456 290 14 11 440 18 455 3.55e-27 114
MS.gene89385.t1 MTR_7g047030 25.714 455 296 15 11 440 3 440 4.13e-27 114
MS.gene89385.t1 MTR_7g047270 25.714 455 296 15 11 440 3 440 4.13e-27 114
MS.gene89385.t1 MTR_6g013990 25.577 477 294 18 4 442 1 454 4.52e-27 114
MS.gene89385.t1 MTR_7g070810 26.078 464 300 16 7 441 2 451 5.13e-27 114
MS.gene89385.t1 MTR_7g080935 25.813 461 309 15 13 461 10 449 6.30e-27 113
MS.gene89385.t1 MTR_8g009067 26.362 459 299 15 11 446 3 445 6.77e-27 113
MS.gene89385.t1 MTR_8g006710 26.134 463 288 15 10 441 2 441 8.94e-27 112
MS.gene89385.t1 MTR_5g016660 25.562 489 279 22 7 441 2 459 9.62e-27 113
MS.gene89385.t1 MTR_1g019520 34.225 187 107 3 272 443 5 190 1.28e-26 107
MS.gene89385.t1 MTR_0288s0020 25.751 466 281 17 9 442 5 437 1.31e-26 112
MS.gene89385.t1 MTR_3g479490 24.838 463 304 16 10 442 2 450 1.41e-26 112
MS.gene89385.t1 MTR_8g008970 25.109 458 306 12 11 446 3 445 1.92e-26 113
MS.gene89385.t1 MTR_8g008970 30.732 205 133 4 240 443 570 766 2.93e-20 94.4
MS.gene89385.t1 MTR_5g072810 25.311 482 298 20 6 459 4 451 2.15e-26 111
MS.gene89385.t1 MTR_4g094220 25.161 465 296 17 14 442 7 455 2.18e-26 112
MS.gene89385.t1 MTR_7g070940 26.407 462 296 19 7 440 2 447 2.20e-26 112
MS.gene89385.t1 MTR_6g038200 25.780 481 311 19 4 463 1 456 2.94e-26 111
MS.gene89385.t1 MTR_8g012745 33.166 199 114 4 260 443 252 446 3.41e-26 111
MS.gene89385.t1 MTR_2g098430 25.217 460 300 18 15 444 7 452 4.65e-26 110
MS.gene89385.t1 MTR_8g059425 25.462 487 282 18 4 442 1 454 5.57e-26 110
MS.gene89385.t1 MTR_8g009067 32.579 221 129 6 240 446 113 327 5.86e-26 108
MS.gene89385.t1 MTR_7g070740 25.167 449 266 19 4 412 1 419 6.94e-26 110
MS.gene89385.t1 MTR_4g108250 23.640 478 304 16 1 440 1 455 7.08e-26 110
MS.gene89385.t1 MTR_8g064880 24.390 451 304 11 12 436 7 446 8.41e-26 110
MS.gene89385.t1 MTR_0536s0020 23.679 473 309 15 7 450 11 460 8.93e-26 110
MS.gene89385.t1 MTR_8g012635 33.484 221 117 6 238 440 238 446 1.23e-25 109
MS.gene89385.t1 MTR_2g083360 23.246 456 234 14 12 462 27 371 1.33e-25 108
MS.gene89385.t1 MTR_7g046490 25.758 462 279 14 14 440 6 438 1.61e-25 109
MS.gene89385.t1 MTR_7g070870 27.431 401 259 13 11 395 16 400 1.74e-25 108
MS.gene89385.t1 MTR_8g088560 24.601 439 303 12 13 439 9 431 2.57e-25 108
MS.gene89385.t1 MTR_8g012730 34.848 198 110 4 261 440 87 283 3.01e-25 105
MS.gene89385.t1 MTR_6g014250 24.190 463 311 15 9 443 5 455 4.55e-25 108
MS.gene89385.t1 MTR_6g038300 22.669 472 308 17 14 458 11 452 6.13e-25 107
MS.gene89385.t1 MTR_2g059240 24.887 442 289 14 8 420 6 433 6.27e-25 107
MS.gene89385.t1 MTR_8g009073 32.836 201 117 5 260 446 120 316 7.95e-25 105
MS.gene89385.t1 MTR_7g080900 24.605 443 298 17 11 439 9 429 9.81e-25 106
MS.gene89385.t1 MTR_1g040310 25.474 475 279 21 13 441 14 459 1.12e-24 107
MS.gene89385.t1 MTR_6g014040 25.316 474 302 18 4 442 1 457 1.34e-24 106
MS.gene89385.t1 MTR_6g038220 24.224 483 315 17 4 463 1 455 1.45e-24 106
MS.gene89385.t1 MTR_6g035265 24.297 391 260 11 11 382 8 381 1.62e-24 106
MS.gene89385.t1 MTR_5g019580 25.926 486 287 16 10 449 3 461 1.75e-24 106
MS.gene89385.t1 MTR_7g013180 25.862 464 298 18 14 458 5 441 2.61e-24 105
MS.gene89385.t1 MTR_1g107360 25.105 474 306 15 12 458 7 458 3.48e-24 105
MS.gene89385.t1 MTR_0184s0030 32.787 183 107 3 273 440 261 442 4.54e-24 105
MS.gene89385.t1 MTR_5g019580 32.035 231 132 6 238 449 261 485 4.89e-24 105
MS.gene89385.t1 MTR_6g014270 24.628 471 291 17 14 442 7 455 5.53e-24 104
MS.gene89385.t1 MTR_8g074550 25.567 485 286 17 8 442 2 461 6.03e-24 105
MS.gene89385.t1 MTR_6g013960 24.684 474 306 17 4 443 1 457 6.20e-24 104
MS.gene89385.t1 MTR_8g012630 34.409 186 103 4 273 440 206 390 6.60e-24 103
MS.gene89385.t1 MTR_3g009510 24.301 465 301 15 15 442 6 456 7.60e-24 104
MS.gene89385.t1 MTR_2g008210 26.096 479 293 19 1 443 1 454 9.07e-24 104
MS.gene89385.t1 MTR_4g485620 25.670 448 287 19 26 443 1 432 9.65e-24 103
MS.gene89385.t1 MTR_6g014020 25.200 500 269 19 4 442 1 456 1.50e-23 103
MS.gene89385.t1 MTR_6g033625 24.390 451 288 18 15 434 5 433 1.59e-23 103
MS.gene89385.t1 MTR_6g005600 25.612 449 280 15 14 430 6 432 1.70e-23 103
MS.gene89385.t1 MTR_8g006270 30.417 240 144 6 217 438 202 436 1.99e-23 103
MS.gene89385.t1 MTR_1g090280 37.430 179 102 4 293 461 133 311 2.03e-23 100
MS.gene89385.t1 MTR_8g012650 32.340 235 131 7 224 440 222 446 2.91e-23 102
MS.gene89385.t1 MTR_6g013450 23.299 485 279 15 14 442 10 457 4.82e-23 102
MS.gene89385.t1 MTR_6g033615 25.688 436 287 17 15 434 5 419 6.24e-23 101
MS.gene89385.t1 MTR_0891s0010 29.839 248 145 8 211 442 32 266 6.28e-23 99.0
MS.gene89385.t1 MTR_6g014170 25.105 478 286 19 1 444 1 440 1.22e-22 100
MS.gene89385.t1 MTR_8g077590 25.764 458 284 16 14 440 9 441 1.72e-22 100
MS.gene89385.t1 MTR_6g033660 25.442 452 293 13 15 440 5 438 2.29e-22 100
MS.gene89385.t1 MTR_5g090630 25.577 477 274 18 11 442 2 442 3.83e-22 99.4
MS.gene89385.t1 MTR_6g014310 26.282 468 285 18 14 442 11 457 1.11e-21 97.8
MS.gene89385.t1 MTR_4g485640 25.806 403 259 14 24 407 219 600 1.56e-21 98.2
MS.gene89385.t1 MTR_7g011470 24.681 470 280 18 10 442 6 438 1.65e-21 97.4
MS.gene89385.t1 MTR_6g033725 25.383 457 285 17 15 440 5 436 1.92e-21 97.1
MS.gene89385.t1 MTR_5g090610 29.249 253 143 9 216 441 193 436 2.15e-21 97.1
MS.gene89385.t1 MTR_7g080940 23.454 469 319 15 13 462 10 457 3.71e-21 96.3
MS.gene89385.t1 MTR_3g479610 33.333 198 114 6 220 403 62 255 3.71e-21 94.4
MS.gene89385.t1 MTR_5g040030 25.227 440 258 17 5 405 5 412 4.32e-21 96.3
MS.gene89385.t1 MTR_4g128690 26.282 468 264 17 1 434 1 421 4.93e-21 95.9
MS.gene89385.t1 MTR_8g028755 27.798 277 149 8 162 434 1 230 5.88e-21 92.0
MS.gene89385.t1 MTR_6g011340 25.523 478 295 20 4 442 1 456 6.49e-21 95.5
MS.gene89385.t1 MTR_4g128720 26.419 458 254 15 13 434 14 424 7.75e-21 95.1
MS.gene89385.t1 MTR_7g013240 24.942 429 265 18 14 421 6 398 8.08e-21 95.1
MS.gene89385.t1 MTR_8g006260 29.572 257 148 7 218 451 209 455 9.67e-21 95.1
MS.gene89385.t1 MTR_6g014187 23.480 477 310 17 4 444 1 458 1.08e-20 95.1
MS.gene89385.t1 MTR_7g011470 24.508 457 301 14 10 442 6 442 1.45e-20 94.4
MS.gene89385.t1 MTR_5g090580 29.804 255 141 10 216 442 207 451 2.35e-20 94.0
MS.gene89385.t1 MTR_5g058320 23.013 478 273 17 14 442 10 441 2.69e-20 93.6
MS.gene89385.t1 MTR_6g035295 25.118 422 251 17 13 396 11 405 3.29e-20 93.6
MS.gene89385.t1 MTR_6g014050 25.427 468 289 18 14 442 11 457 3.57e-20 93.6
MS.gene89385.t1 MTR_6g014200 24.792 480 277 17 14 442 7 453 3.73e-20 93.2
MS.gene89385.t1 MTR_1g107380 26.571 350 230 12 129 460 134 474 3.76e-20 93.2
MS.gene89385.t1 MTR_4g008630 27.027 185 122 3 273 445 259 442 3.91e-20 93.2
MS.gene89385.t1 MTR_2g035040 29.493 217 129 8 250 442 147 363 4.86e-20 92.4
MS.gene89385.t1 MTR_5g039900 23.173 479 289 19 13 442 12 460 4.92e-20 93.2
MS.gene89385.t1 MTR_8g044140 25.508 443 262 19 43 441 6 424 5.59e-20 92.8
MS.gene89385.t1 MTR_2g046750 23.176 466 295 14 13 442 4 442 5.74e-20 92.8
MS.gene89385.t1 MTR_4g064987 23.767 446 296 15 15 445 9 425 6.35e-20 92.4
MS.gene89385.t1 MTR_7g080950 22.505 471 321 14 13 464 5 450 6.65e-20 92.4
MS.gene89385.t1 MTR_4g095008 24.632 475 290 19 3 443 2 442 7.16e-20 92.8
MS.gene89385.t1 MTR_6g033675 35.849 159 93 4 272 421 266 424 8.36e-20 92.4
MS.gene89385.t1 MTR_6g013900 24.319 477 305 19 4 444 1 457 1.80e-19 91.3
MS.gene89385.t1 MTR_6g014150 24.074 486 277 18 10 440 3 451 2.33e-19 90.9
MS.gene89385.t1 MTR_5g090660 30.739 257 136 11 216 442 205 449 2.54e-19 91.3
MS.gene89385.t1 MTR_7g013260 24.107 448 286 16 14 441 6 419 2.61e-19 90.5
MS.gene89385.t1 MTR_1g029540 23.750 240 165 5 221 446 205 440 3.09e-19 90.5
MS.gene89385.t1 MTR_4g064987 24.454 458 284 18 15 445 9 431 3.20e-19 90.5
MS.gene89385.t1 MTR_2g046820 25.258 388 258 10 75 442 64 439 3.53e-19 90.1
MS.gene89385.t1 MTR_5g072860 23.400 453 303 17 14 446 18 446 3.76e-19 90.1
MS.gene89385.t1 MTR_5g004940 32.558 172 106 3 273 435 199 369 5.65e-19 89.0
MS.gene89385.t1 MTR_6g014190 27.468 233 153 6 221 444 40 265 6.24e-19 87.4
MS.gene89385.t1 MTR_8g083290 22.269 476 307 16 12 448 2 453 8.21e-19 89.0
MS.gene89385.t1 MTR_5g072840 22.803 478 312 18 6 459 2 446 8.63e-19 89.0
MS.gene89385.t1 MTR_5g090620 33.163 196 105 6 270 442 260 452 1.45e-18 88.6
MS.gene89385.t1 MTR_5g098930 24.628 471 288 17 11 442 2 444 1.74e-18 88.2
MS.gene89385.t1 MTR_5g072830 22.881 472 319 18 6 459 2 446 1.79e-18 88.2
MS.gene89385.t1 MTR_8g466240 24.464 466 277 19 14 439 8 438 2.03e-18 87.8
MS.gene89385.t1 MTR_8g090095 28.507 221 138 5 258 459 258 477 2.31e-18 87.8
MS.gene89385.t1 MTR_3g009490 32.530 166 92 4 297 442 3 168 5.66e-18 82.4
MS.gene89385.t1 MTR_4g094920 23.279 494 311 17 4 459 18 481 8.90e-18 86.3
MS.gene89385.t1 MTR_7g013220 24.130 431 270 18 14 417 5 405 9.47e-18 85.9
MS.gene89385.t1 MTR_5g090600 31.776 214 121 10 240 442 231 430 1.16e-17 85.5
MS.gene89385.t1 MTR_6g014240 22.727 484 282 15 11 443 4 446 1.96e-17 84.7
MS.gene89385.t1 MTR_2g040530 26.367 311 198 9 111 403 105 402 2.09e-17 84.7
MS.gene89385.t1 MTR_5g072820 25.109 458 294 20 6 445 2 428 2.27e-17 84.7
MS.gene89385.t1 MTR_7g470610 36.641 131 75 4 272 396 133 261 2.80e-17 82.4
MS.gene89385.t1 MTR_7g070583 36.641 131 75 4 272 396 133 261 2.80e-17 82.4
MS.gene89385.t1 MTR_7g013200 24.537 432 266 19 14 422 5 399 2.91e-17 84.3
MS.gene89385.t1 MTR_6g013920 25.316 474 304 16 4 444 1 457 3.47e-17 84.3
MS.gene89385.t1 MTR_5g090670 28.444 225 133 7 240 442 235 453 5.35e-17 83.6
MS.gene89385.t1 MTR_3g084540 23.391 466 293 18 14 439 6 447 5.88e-17 83.6
MS.gene89385.t1 MTR_5g027210 22.173 451 246 11 15 397 5 418 6.37e-17 83.6
MS.gene89385.t1 MTR_3g084520 22.912 467 293 19 14 439 6 446 9.61e-17 82.8
MS.gene89385.t1 MTR_5g090700 27.668 253 147 9 217 442 210 453 1.05e-16 82.8
MS.gene89385.t1 MTR_5g016480 23.542 480 318 15 13 458 7 471 2.57e-16 81.6
MS.gene89385.t1 MTR_8g007585 30.058 173 112 4 273 442 202 368 1.10e-15 79.0
MS.gene89385.t1 MTR_4g114260 51.429 70 32 2 87 156 1 68 1.96e-15 71.6
MS.gene89385.t1 MTR_1g061740 51.429 70 32 2 87 156 1 68 1.96e-15 71.6
MS.gene89385.t1 MTR_3g069710 25.862 232 153 7 220 442 207 428 2.82e-15 78.2
MS.gene89385.t1 MTR_0477s0010 28.090 178 119 4 268 442 122 293 3.85e-15 76.6
MS.gene89385.t1 MTR_8g009840 31.677 161 91 3 287 429 332 491 4.75e-15 77.8
MS.gene89385.t1 MTR_5g090690 34.014 147 77 5 243 374 166 307 9.32e-15 76.3
MS.gene89385.t1 MTR_2g086283 29.091 165 95 4 304 463 187 334 1.01e-14 75.5
MS.gene89385.t1 MTR_8g043470 28.070 171 114 4 273 440 188 352 1.05e-14 75.9
MS.gene89385.t1 MTR_3g031400 23.744 438 292 16 14 440 18 424 1.22e-14 76.3
MS.gene89385.t1 MTR_3g069690 28.108 185 118 6 272 447 256 434 1.82e-14 75.9
MS.gene89385.t1 MTR_7g039550 32.432 148 88 4 261 405 48 186 6.20e-14 72.4
MS.gene89385.t1 MTR_5g070040 32.886 149 93 5 270 411 266 414 2.21e-13 72.4
MS.gene89385.t1 MTR_3g031450 24.229 454 272 21 14 440 18 426 7.64e-13 70.9
MS.gene89385.t1 MTR_5g098960 33.071 127 79 4 273 396 262 385 2.55e-12 68.9
MS.gene89385.t1 MTR_5g075440 22.687 454 297 14 14 443 10 433 3.08e-12 68.9
MS.gene89385.t1 MTR_4g082810 31.481 162 99 6 242 396 240 396 3.38e-12 68.6
MS.gene89385.t1 MTR_5g070090 28.415 183 114 6 270 442 266 441 1.15e-11 67.0
MS.gene89385.t1 MTR_4g082820 28.421 190 121 5 220 396 207 394 2.38e-11 66.2
MS.gene89385.t1 MTR_5g031840 22.222 405 281 15 14 396 5 397 6.78e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89385.t1 AT2G22590 40.252 477 266 11 1 465 1 470 2.28e-119 358
MS.gene89385.t1 AT5G65550 38.116 467 256 10 13 461 8 459 4.57e-112 339
MS.gene89385.t1 AT5G49690 38.411 453 267 6 13 462 9 452 2.33e-110 334
MS.gene89385.t1 AT2G22930 30.983 468 279 13 13 466 5 442 2.07e-60 204
MS.gene89385.t1 AT3G29630 31.027 477 277 16 13 470 5 448 6.56e-60 203
MS.gene89385.t1 AT4G09500 30.538 465 279 15 13 463 5 439 9.21e-58 197
MS.gene89385.t1 AT5G53990 31.072 457 283 11 13 461 5 437 2.46e-56 194
MS.gene89385.t1 AT3G29630 30.233 473 260 16 13 470 5 422 2.61e-56 193
MS.gene89385.t1 AT4G27570 31.013 474 276 16 9 462 2 444 1.44e-54 189
MS.gene89385.t1 AT1G64910 31.613 465 276 14 10 461 2 437 7.63e-54 187
MS.gene89385.t1 AT1G64920 29.336 467 288 14 10 461 2 441 6.96e-53 184
MS.gene89385.t1 AT4G27560 30.444 473 280 16 9 462 2 444 1.16e-52 184
MS.gene89385.t1 AT4G09500 29.590 463 261 14 13 463 5 414 3.54e-52 182
MS.gene89385.t1 AT5G54010 30.022 463 290 17 13 463 5 445 9.89e-51 179
MS.gene89385.t1 AT1G50580 29.060 468 279 14 13 461 5 438 1.37e-49 176
MS.gene89385.t1 AT5G54060 28.998 469 287 18 13 457 12 458 7.40e-47 169
MS.gene89385.t1 AT3G53150 30.905 453 258 19 11 423 19 456 1.82e-42 157
MS.gene89385.t1 AT4G34131 26.884 491 307 19 8 459 4 481 1.86e-39 149
MS.gene89385.t1 AT2G15490 26.526 475 280 17 13 443 6 455 2.72e-37 143
MS.gene89385.t1 AT2G15490 26.569 478 279 18 13 443 6 458 2.95e-36 140
MS.gene89385.t1 AT4G34135 26.506 415 256 12 4 387 1 397 3.15e-36 140
MS.gene89385.t1 AT2G15480 26.151 478 292 16 6 443 2 458 3.63e-36 140
MS.gene89385.t1 AT2G36750 29.426 418 254 16 12 406 8 407 6.10e-36 139
MS.gene89385.t1 AT1G51210 26.279 430 299 8 14 441 20 433 1.09e-35 137
MS.gene89385.t1 AT2G36800 28.326 466 290 20 10 441 8 463 1.56e-35 138
MS.gene89385.t1 AT2G15480 26.316 513 287 14 6 447 2 494 1.72e-35 138
MS.gene89385.t1 AT3G53160 27.500 480 293 19 12 455 6 466 6.27e-34 133
MS.gene89385.t1 AT2G36780 28.851 409 253 17 13 396 13 408 1.62e-33 132
MS.gene89385.t1 AT4G34138 25.403 496 311 20 13 466 10 488 5.75e-33 130
MS.gene89385.t1 AT2G36760 27.317 410 260 14 12 396 12 408 8.61e-33 130
MS.gene89385.t1 AT4G15490 26.283 487 315 15 8 465 2 473 1.17e-32 130
MS.gene89385.t1 AT2G36770 28.132 423 259 17 4 396 1 408 1.39e-32 130
MS.gene89385.t1 AT1G05680 24.416 471 309 17 14 461 6 452 1.18e-31 126
MS.gene89385.t1 AT3G50740 25.532 470 282 12 14 442 7 449 1.62e-31 127
MS.gene89385.t1 AT4G36770 27.015 459 285 12 13 442 3 440 1.00e-30 124
MS.gene89385.t1 AT2G16890 26.180 466 278 16 14 443 9 444 6.32e-30 122
MS.gene89385.t1 AT5G14860 26.998 463 287 17 14 443 8 452 9.34e-30 122
MS.gene89385.t1 AT5G03490 25.397 441 277 13 8 422 13 427 9.71e-30 121
MS.gene89385.t1 AT1G05675 24.719 445 292 15 14 439 6 426 1.09e-29 121
MS.gene89385.t1 AT1G22400 26.614 511 298 20 1 464 1 481 1.41e-29 121
MS.gene89385.t1 AT1G22360 26.261 476 292 17 14 452 10 463 1.52e-29 121
MS.gene89385.t1 AT2G36790 27.155 464 295 16 12 442 11 464 3.07e-29 120
MS.gene89385.t1 AT1G01420 27.293 458 293 13 8 442 3 443 3.19e-29 120
MS.gene89385.t1 AT1G01420 27.293 458 293 13 8 442 6 446 3.61e-29 120
MS.gene89385.t1 AT1G22340 25.697 502 312 19 1 463 1 480 3.94e-29 120
MS.gene89385.t1 AT4G15500 27.314 443 288 16 14 438 9 435 4.20e-29 119
MS.gene89385.t1 AT5G12890 25.667 487 274 16 11 444 7 458 7.55e-29 119
MS.gene89385.t1 AT1G22360 26.793 474 287 18 14 444 10 466 4.26e-28 116
MS.gene89385.t1 AT1G22380 26.526 475 291 20 4 443 6 457 7.89e-28 116
MS.gene89385.t1 AT1G73880 25.052 483 265 18 6 432 4 445 8.82e-28 115
MS.gene89385.t1 AT4G15480 24.229 454 296 10 12 437 17 450 1.41e-27 115
MS.gene89385.t1 AT2G31790 25.519 482 292 21 14 461 8 456 4.50e-27 113
MS.gene89385.t1 AT1G10400 24.336 452 303 14 13 443 6 439 2.61e-26 111
MS.gene89385.t1 AT2G16890 25.850 441 261 16 14 418 9 419 1.20e-25 108
MS.gene89385.t1 AT5G05880 25.652 460 289 17 13 451 7 434 1.42e-25 109
MS.gene89385.t1 AT5G26310 26.022 465 275 17 14 440 7 440 1.61e-25 109
MS.gene89385.t1 AT5G66690 25.435 460 284 12 14 440 7 440 1.65e-25 109
MS.gene89385.t1 AT2G18570 25.702 463 282 17 14 440 5 441 4.22e-25 108
MS.gene89385.t1 AT3G21790 33.333 243 138 8 220 442 217 455 4.94e-25 108
MS.gene89385.t1 AT4G01070 26.087 460 296 12 10 443 4 445 7.23e-25 107
MS.gene89385.t1 AT1G22370 25.610 492 311 19 1 456 1 473 1.61e-24 106
MS.gene89385.t1 AT2G29730 23.128 454 315 13 11 444 2 441 2.41e-24 105
MS.gene89385.t1 AT2G30140 23.890 473 302 17 10 458 9 447 5.40e-24 104
MS.gene89385.t1 AT2G29710 24.359 468 284 15 15 444 6 441 1.46e-23 103
MS.gene89385.t1 AT1G01390 24.490 490 318 14 8 467 3 470 1.91e-23 103
MS.gene89385.t1 AT1G01390 24.490 490 318 14 8 467 20 487 2.09e-23 103
MS.gene89385.t1 AT2G30140 24.059 478 296 18 10 458 9 448 2.28e-23 102
MS.gene89385.t1 AT1G07250 25.376 465 294 16 11 441 3 448 2.35e-23 102
MS.gene89385.t1 AT4G15260 30.882 272 144 10 220 458 95 355 4.86e-23 100
MS.gene89385.t1 AT1G78270 23.849 478 308 15 1 443 1 457 7.14e-23 101
MS.gene89385.t1 AT1G30530 33.333 171 108 3 272 442 263 427 1.31e-22 100
MS.gene89385.t1 AT3G16520 31.731 208 125 6 243 438 237 439 2.36e-22 99.8
MS.gene89385.t1 AT2G43840 25.000 452 271 19 14 437 7 418 2.46e-22 99.8
MS.gene89385.t1 AT3G16520 31.731 208 125 6 243 438 237 439 2.47e-22 99.8
MS.gene89385.t1 AT3G21800 34.101 217 120 8 245 442 240 452 3.20e-22 99.8
MS.gene89385.t1 AT3G16520 31.731 208 125 6 243 438 237 439 3.22e-22 99.4
MS.gene89385.t1 AT3G46670 24.894 470 295 16 14 458 9 445 3.97e-22 99.0
MS.gene89385.t1 AT5G05870 24.459 462 270 20 14 438 8 427 4.19e-22 99.0
MS.gene89385.t1 AT2G43840 24.062 453 274 19 14 437 7 418 6.46e-22 98.6
MS.gene89385.t1 AT2G30150 24.632 475 300 17 14 461 13 456 6.72e-22 98.6
MS.gene89385.t1 AT2G18560 31.148 244 139 6 218 440 116 351 7.39e-22 97.4
MS.gene89385.t1 AT5G05900 24.190 463 289 18 8 445 2 427 7.48e-22 98.2
MS.gene89385.t1 AT5G59590 24.619 459 284 15 11 444 7 428 2.12e-21 97.1
MS.gene89385.t1 AT3G02100 23.441 465 308 18 1 444 1 438 3.19e-21 96.7
MS.gene89385.t1 AT3G21560 22.526 475 331 11 12 461 10 472 3.19e-21 96.7
MS.gene89385.t1 AT3G21760 29.218 243 149 6 220 442 218 457 3.37e-21 96.7
MS.gene89385.t1 AT4G15280 30.769 273 144 11 220 458 213 474 4.48e-21 96.3
MS.gene89385.t1 AT4G15280 30.769 273 144 11 220 458 245 506 4.69e-21 96.3
MS.gene89385.t1 AT5G17050 31.579 209 128 6 235 443 241 434 5.36e-21 95.9
MS.gene89385.t1 AT5G05890 24.946 465 290 18 13 451 7 438 7.24e-21 95.5
MS.gene89385.t1 AT1G24100 25.053 475 306 17 14 463 11 460 7.61e-21 95.5
MS.gene89385.t1 AT1G06000 24.729 461 263 16 14 435 10 425 1.01e-20 94.7
MS.gene89385.t1 AT4G15550 24.473 474 289 19 4 437 1 445 1.07e-20 95.1
MS.gene89385.t1 AT2G36970 32.948 173 110 4 273 442 278 447 1.17e-20 95.1
MS.gene89385.t1 AT5G38040 25.926 459 294 17 22 461 18 449 1.24e-20 94.7
MS.gene89385.t1 AT4G34135 23.824 340 225 10 4 320 1 329 1.93e-20 92.8
MS.gene89385.t1 AT2G31750 21.915 470 318 18 14 459 8 452 2.48e-20 93.6
MS.gene89385.t1 AT2G28080 23.278 421 294 14 18 421 22 430 2.49e-20 94.0
MS.gene89385.t1 AT3G46660 23.140 484 322 14 1 462 1 456 2.82e-20 93.6
MS.gene89385.t1 AT2G31750 21.915 470 318 18 14 459 8 452 2.99e-20 93.6
MS.gene89385.t1 AT2G30150 24.204 471 299 17 18 461 1 440 5.41e-20 92.4
MS.gene89385.t1 AT3G21780 31.818 242 142 9 220 442 208 445 6.27e-20 92.8
MS.gene89385.t1 AT1G07260 30.638 235 145 9 220 442 220 448 7.62e-20 92.4
MS.gene89385.t1 AT2G43820 25.000 452 283 17 10 439 3 420 7.82e-20 92.0
MS.gene89385.t1 AT2G23260 25.828 453 282 17 14 443 10 431 1.01e-19 92.0
MS.gene89385.t1 AT2G29750 37.654 162 92 7 269 422 273 433 1.14e-19 92.0
MS.gene89385.t1 AT3G46650 22.863 468 299 17 14 461 10 435 2.52e-19 90.5
MS.gene89385.t1 AT2G22930 29.279 222 136 7 13 231 5 208 3.89e-19 88.2
MS.gene89385.t1 AT5G05860 25.333 450 287 19 7 438 2 420 5.99e-19 89.4
MS.gene89385.t1 AT3G46690 23.556 450 291 16 14 442 9 426 8.89e-19 89.0
MS.gene89385.t1 AT4G14090 23.377 462 298 17 1 439 1 429 2.70e-18 87.4
MS.gene89385.t1 AT5G17030 28.910 211 135 6 234 443 237 433 2.85e-18 87.4
MS.gene89385.t1 AT1G05560 23.418 474 308 17 12 456 3 450 3.26e-18 87.4
MS.gene89385.t1 AT1G05560 23.840 474 306 18 12 456 53 500 4.04e-18 87.4
MS.gene89385.t1 AT1G07240 38.732 142 81 3 267 403 268 408 4.70e-18 87.0
MS.gene89385.t1 AT3G55700 22.785 474 313 15 10 459 4 448 4.93e-18 86.7
MS.gene89385.t1 AT2G23250 23.690 439 291 14 17 440 1 410 4.95e-18 86.7
MS.gene89385.t1 AT2G29740 34.731 167 99 4 242 403 250 411 5.74e-18 86.7
MS.gene89385.t1 AT3G46680 22.936 436 301 12 14 437 9 421 3.65e-17 84.0
MS.gene89385.t1 AT5G59580 28.509 228 146 6 239 458 226 444 5.11e-17 83.6
MS.gene89385.t1 AT3G21750 28.163 245 146 8 220 440 205 443 9.28e-17 82.8
MS.gene89385.t1 AT1G05530 22.013 477 316 15 14 461 5 454 1.23e-16 82.4
MS.gene89385.t1 AT2G26480 31.553 206 121 7 241 437 223 417 1.56e-16 82.0
MS.gene89385.t1 AT5G17040 29.070 172 116 3 272 443 252 417 2.25e-16 81.6
MS.gene89385.t1 AT5G17040 29.070 172 116 3 272 443 150 315 2.26e-16 80.5
MS.gene89385.t1 AT3G46700 22.573 443 283 17 14 434 9 413 6.62e-16 80.1
MS.gene89385.t1 AT5G38010 27.309 249 146 10 207 437 194 425 1.37e-15 79.3
MS.gene89385.t1 AT3G46720 21.968 437 293 14 15 437 10 412 2.49e-14 75.5
MS.gene89385.t1 AT3G22250 34.884 129 75 5 273 396 276 400 3.09e-14 75.1
MS.gene89385.t1 AT3G55710 26.582 237 158 8 233 459 222 452 1.98e-13 72.8
MS.gene89385.t1 AT1G22370 28.205 195 123 6 273 456 115 303 8.33e-13 69.7
MS.gene89385.t1 AT5G37950 31.548 168 90 7 231 387 192 345 2.10e-11 65.5
MS.gene89385.t1 AT5G37950 31.548 168 90 7 231 387 198 351 2.13e-11 65.9

Find 123 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGAGATGCTTAATTT+TGG 0.120179 3.3:-33127675 MS.gene89385:CDS
GCTCTTGGAATCGAGCTTTC+TGG 0.144798 3.3:-33127873 MS.gene89385:CDS
TTTCTGGGTTACCTTTCTTT+TGG 0.208647 3.3:-33127857 MS.gene89385:CDS
GATGAATGGCTCAAGGGATT+TGG 0.235136 3.3:+33128601 None:intergenic
CCTTGAGCCATTCATCAAAT+TGG 0.247392 3.3:-33128594 MS.gene89385:CDS
ATGTCTTCCGCCGTTAAATT+TGG 0.249812 3.3:+33128287 None:intergenic
ATGAATGGCTCAAGGGATTT+GGG 0.251072 3.3:+33128602 None:intergenic
ATGGTGCTCTCTGCACCTTC+TGG 0.252360 3.3:+33128539 None:intergenic
CCAAACAGTACCACGGTCTT+TGG 0.284498 3.3:+33127776 None:intergenic
ACACTGGATGTTGAGGCTTT+TGG 0.318069 3.3:+33128376 None:intergenic
CCATCATCTGTTCTGTTCAT+AGG 0.319211 3.3:-33127942 MS.gene89385:CDS
ACATTTGTAGTCCACCAAAT+TGG 0.332197 3.3:-33128268 MS.gene89385:CDS
TGGTGCTCTCTGCACCTTCT+GGG 0.342067 3.3:+33128540 None:intergenic
ATCTGTTCTGTTCATAGGAT+TGG 0.343144 3.3:-33127937 MS.gene89385:CDS
CTCTTGGAATCGAGCTTTCT+GGG 0.354413 3.3:-33127872 MS.gene89385:CDS
TGCTCCAAGATGGGGTTAAC+TGG 0.371316 3.3:+33128345 None:intergenic
GGCCAAGATTCTTGCTCAAA+AGG 0.373740 3.3:-33128681 MS.gene89385:CDS
AGTTGATTATAATCAGAATC+AGG 0.377845 3.3:+33128161 None:intergenic
CTTTAATCCACCTAAGGATA+AGG 0.389197 3.3:-33128315 MS.gene89385:CDS
AGACATTGATCTAGCAAATT+CGG 0.391113 3.3:+33127633 None:intergenic
ATATTGGCTGATGCGGCAAT+TGG 0.400336 3.3:-33127729 MS.gene89385:CDS
ATGTGTCCCATAGCTAGAAA+TGG 0.401626 3.3:+33128722 None:intergenic
ATGAAGAAAACAACCCTGAT+TGG 0.404305 3.3:-33127998 MS.gene89385:CDS
CCAAAGACCGTGGTACTGTT+TGG 0.405274 3.3:-33127776 MS.gene89385:CDS
CTAATTCAGTTAGATCTTGC+TGG 0.409466 3.3:+33127895 None:intergenic
AACCCTCATGAGCCATCTTA+AGG 0.411542 3.3:+33128489 None:intergenic
CTGGAACCACAGGCACGTTC+AGG 0.412904 3.3:+33128063 None:intergenic
AATGGATTCCATTGCTAATG+AGG 0.421492 3.3:-33128777 MS.gene89385:CDS
TCTGTTCTGTTCATAGGATT+GGG 0.424084 3.3:-33127936 MS.gene89385:CDS
TCTATGATATTACAAGTGGC+TGG 0.425971 3.3:-33128412 MS.gene89385:CDS
TTTACCAGTTAACCCCATCT+TGG 0.428301 3.3:-33128349 MS.gene89385:CDS
GATCTAACTGAATTAGCTCT+TGG 0.431327 3.3:-33127888 MS.gene89385:CDS
TATTGGCTGATGCGGCAATT+GGG 0.434541 3.3:-33127728 MS.gene89385:CDS
GTCCCATCTTGCTCACTCCT+TGG 0.435085 3.3:+33127567 None:intergenic
TTTGGCTTGACCTTATCCTT+AGG 0.439765 3.3:+33128305 None:intergenic
GATGCTCCCATTTCTAGCTA+TGG 0.440646 3.3:-33128729 MS.gene89385:CDS
AATGCTCTAATAAGCTCATA+AGG 0.440875 3.3:+33128215 None:intergenic
GTCACCTCAACAGAAGATAT+TGG 0.442320 3.3:-33127745 MS.gene89385:CDS
GCTACCTTTACCACGTATAG+AGG 0.454731 3.3:-33128567 MS.gene89385:CDS
AGCCTTACCAATTTGATGAA+TGG 0.459877 3.3:+33128587 None:intergenic
GTTCTATCCTCAAACCCATC+TGG 0.462975 3.3:+33127798 None:intergenic
AAATTCATCAAAGCCCGATT+GGG 0.466607 3.3:-33128438 MS.gene89385:CDS
AAAGAGATGAGCAAGGTTAT+CGG 0.468485 3.3:-33127465 MS.gene89385:CDS
AAGAGCACTAGTAGAAAAGA+AGG 0.469633 3.3:-33127604 MS.gene89385:CDS
AGCAACCCCACTGGAACCAC+AGG 0.473461 3.3:+33128053 None:intergenic
TGAATTACCAGATGGGTTTG+AGG 0.474182 3.3:-33127805 MS.gene89385:CDS
ATGAGCCATCTTAAGGTAAC+GGG 0.476122 3.3:+33128496 None:intergenic
GTGAAAATCAAGACATGGTT+GGG 0.476623 3.3:-33127975 MS.gene89385:CDS
TGAAGAAAACAACCCTGATT+GGG 0.479948 3.3:-33127997 MS.gene89385:CDS
CTAGAGAACTTGAGGGAGAA+TGG 0.480043 3.3:-33128103 MS.gene89385:CDS
AAGAAACATATGCTCCAAGA+TGG 0.480675 3.3:+33128335 None:intergenic
ATTGCAATATGGTTAATTGT+CGG 0.484727 3.3:+33127374 None:intergenic
ATTGGCTGATGCGGCAATTG+GGG 0.492288 3.3:-33127727 MS.gene89385:CDS
GCCAAGATTCTTGCTCAAAA+GGG 0.493461 3.3:-33128680 MS.gene89385:CDS
TAAGGTCAAGCCAAATTTAA+CGG 0.494570 3.3:-33128297 MS.gene89385:CDS
CTTAAGGTAACGGGTGGTGT+TGG 0.496908 3.3:+33128505 None:intergenic
TACCAAGGAGTGAGCAAGAT+GGG 0.497090 3.3:-33127569 MS.gene89385:CDS
ATGTTTCTTTAATCCACCTA+AGG 0.503657 3.3:-33128321 MS.gene89385:CDS
ATGCTCCCATTTCTAGCTAT+GGG 0.508856 3.3:-33128728 MS.gene89385:CDS
AACGTGCCTGTGGTTCCAGT+GGG 0.509445 3.3:-33128059 MS.gene89385:CDS
GGCTTGACCTTATCCTTAGG+TGG 0.509868 3.3:+33128308 None:intergenic
TGTGTCCCATAGCTAGAAAT+GGG 0.513316 3.3:+33128723 None:intergenic
CTCAGCTCTTAAAGACGAGT+CGG 0.520788 3.3:-33128192 MS.gene89385:CDS
AAAATTCATCAAAGCCCGAT+TGG 0.523768 3.3:-33128439 MS.gene89385:CDS
AATATCATAGAAAACCCAAT+CGG 0.525196 3.3:+33128424 None:intergenic
TGAATGGCTCAAGGGATTTG+GGG 0.529631 3.3:+33128603 None:intergenic
CCAATTTGATGAATGGCTCA+AGG 0.534174 3.3:+33128594 None:intergenic
AGCCATTCATCAAATTGGTA+AGG 0.535808 3.3:-33128589 MS.gene89385:CDS
GGTACATTTGAATTACCAGA+TGG 0.536089 3.3:-33127813 MS.gene89385:CDS
GGTGAAAATCAAGACATGGT+TGG 0.539378 3.3:-33127976 MS.gene89385:CDS
AAGAACCTCTAGAGAACTTG+AGG 0.545066 3.3:-33128111 MS.gene89385:CDS
AGAAACATATGCTCCAAGAT+GGG 0.549122 3.3:+33128336 None:intergenic
CCTATGAACAGAACAGATGA+TGG 0.550040 3.3:+33127942 None:intergenic
CATGAGCCATCTTAAGGTAA+CGG 0.551425 3.3:+33128495 None:intergenic
CACCACCCGTTACCTTAAGA+TGG 0.552084 3.3:-33128501 MS.gene89385:CDS
CAATTTGATGAATGGCTCAA+GGG 0.552781 3.3:+33128595 None:intergenic
GTTGCCATCCTCATTAGCAA+TGG 0.552903 3.3:+33128769 None:intergenic
GAATGGCTCAAGGGATTTGG+GGG 0.553751 3.3:+33128604 None:intergenic
AGTCCCTCTATACGTGGTAA+AGG 0.557859 3.3:+33128563 None:intergenic
ATATCATAGAAAACCCAATC+GGG 0.558850 3.3:+33128425 None:intergenic
TTGAAAGGAAGCCAATTTGG+TGG 0.560149 3.3:+33128257 None:intergenic
CTATGATATTACAAGTGGCT+GGG 0.560415 3.3:-33128411 MS.gene89385:CDS
TTACCTTAAGATGGCTCATG+AGG 0.560649 3.3:-33128492 MS.gene89385:CDS
TCAGCTCTTAAAGACGAGTC+GGG 0.567866 3.3:-33128191 MS.gene89385:CDS
GAACGTGCCTGTGGTTCCAG+TGG 0.572442 3.3:-33128060 MS.gene89385:CDS
GCAAGATGGGACATTAACTA+AGG 0.574106 3.3:-33127556 MS.gene89385:CDS
ACGTCTCTTATCTGCATGGA+TGG 0.574353 3.3:+33128026 None:intergenic
TTCAACGTCTCTTATCTGCA+TGG 0.585428 3.3:+33128022 None:intergenic
GATTCCATTGCTAATGAGGA+TGG 0.586107 3.3:-33128773 MS.gene89385:CDS
GATGGTGGAAGCAACCCCAC+TGG 0.587508 3.3:+33128044 None:intergenic
TTGGCTGATGCGGCAATTGG+GGG 0.590327 3.3:-33127726 MS.gene89385:CDS
TTCTCCCTCAAGTTCTCTAG+AGG 0.591066 3.3:+33128106 None:intergenic
GGTGTTGGATGAAATGTCCA+TGG 0.595365 3.3:+33128520 None:intergenic
TGTAGCACAGACGTTGAGGT+TGG 0.596516 3.3:-33127529 MS.gene89385:CDS
AGAACCTCTAGAGAACTTGA+GGG 0.600127 3.3:-33128110 MS.gene89385:CDS
ACAGAAGATATTGGCTGATG+CGG 0.601028 3.3:-33127736 MS.gene89385:CDS
ATTGATCTAGCAAATTCGGA+AGG 0.601465 3.3:+33127637 None:intergenic
TAGGATTGGGCAGCGAGTCG+AGG 0.602697 3.3:-33127923 MS.gene89385:CDS
TCTCTTATCTGCATGGATGG+TGG 0.603571 3.3:+33128029 None:intergenic
CTACCTTTACCACGTATAGA+GGG 0.606446 3.3:-33128566 MS.gene89385:CDS
AGGTAGCTATTGAGATACCA+AGG 0.608148 3.3:-33127584 MS.gene89385:CDS
GTGGTACTGTTTGGAAAACA+TGG 0.612401 3.3:-33127767 MS.gene89385:CDS
GGGAGCATCACAACATGAAG+AGG 0.613488 3.3:+33128743 None:intergenic
GAGGTTGGCAATAGTTCATG+AGG 0.613513 3.3:-33127514 MS.gene89385:CDS
TCAGCCAATATCTTCTGTTG+AGG 0.613986 3.3:+33127741 None:intergenic
GAAACATATGCTCCAAGATG+GGG 0.614303 3.3:+33128337 None:intergenic
ATACCAAGGAGTGAGCAAGA+TGG 0.615705 3.3:-33127570 MS.gene89385:CDS
GTACATTTGAATTACCAGAT+GGG 0.617236 3.3:-33127812 MS.gene89385:CDS
TACCTTAAGATGGCTCATGA+GGG 0.619190 3.3:-33128491 MS.gene89385:CDS
CTCTTACCTGAACGTGCCTG+TGG 0.622831 3.3:-33128069 MS.gene89385:CDS
CGTATAGAGGGACTCCCAGA+AGG 0.623773 3.3:-33128554 MS.gene89385:CDS
GTTGGCAATAGTTCATGAGG+AGG 0.649153 3.3:-33127511 MS.gene89385:CDS
AGAGTGTAGCACAGACGTTG+AGG 0.651979 3.3:-33127533 MS.gene89385:CDS
TTGATCTAGCAAATTCGGAA+GGG 0.658213 3.3:+33127638 None:intergenic
TTGGCAATAGTTCATGAGGA+GGG 0.663002 3.3:-33127510 MS.gene89385:CDS
AGCCATCTTAAGGTAACGGG+TGG 0.664758 3.3:+33128499 None:intergenic
CAACGCAAAAGAGATGAGCA+AGG 0.695920 3.3:-33127472 MS.gene89385:CDS
AGAAGGTGCAGAGAGCACCA+TGG 0.698198 3.3:-33128537 MS.gene89385:CDS
GGTCAAGCCAAATTTAACGG+CGG 0.720602 3.3:-33128294 MS.gene89385:CDS
TCTGGGAGTCCCTCTATACG+TGG 0.724806 3.3:+33128557 None:intergenic
GAGGATAGAACCAAAGACCG+TGG 0.741346 3.3:-33127786 MS.gene89385:CDS
ATTGGGTGAAAATCAAGACA+TGG 0.744368 3.3:-33127980 MS.gene89385:CDS
ACGTGCCTGTGGTTCCAGTG+GGG 0.772831 3.3:-33128058 MS.gene89385:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGAATAGTTGTTTTGAA+AGG + chr3.3:33127923-33127942 None:intergenic 20.0%
! AATATCATAGAAAACCCAAT+CGG + chr3.3:33127741-33127760 None:intergenic 25.0%
! AGTTGATTATAATCAGAATC+AGG + chr3.3:33128004-33128023 None:intergenic 25.0%
!! GTTTTCTATGATATTACAAG+TGG - chr3.3:33127746-33127765 MS.gene89385:CDS 25.0%
!! TCATTGAGATGCTTAATTTT+GGG - chr3.3:33128488-33128507 MS.gene89385:CDS 25.0%
!!! GCTTTAAAAAATCTGAAAGA+GGG - chr3.3:33128328-33128347 MS.gene89385:CDS 25.0%
!!! TTTTTTAAAGCCCAAAAGAA+AGG + chr3.3:33128319-33128338 None:intergenic 25.0%
AATGCTCTAATAAGCTCATA+AGG + chr3.3:33127950-33127969 None:intergenic 30.0%
AGACATTGATCTAGCAAATT+CGG + chr3.3:33128532-33128551 None:intergenic 30.0%
ATATCATAGAAAACCCAATC+GGG + chr3.3:33127740-33127759 None:intergenic 30.0%
ATGTTTCTTTAATCCACCTA+AGG - chr3.3:33127841-33127860 MS.gene89385:CDS 30.0%
GTACATTTGAATTACCAGAT+GGG - chr3.3:33128350-33128369 MS.gene89385:CDS 30.0%
TAAGGTCAAGCCAAATTTAA+CGG - chr3.3:33127865-33127884 MS.gene89385:CDS 30.0%
! GTCATTGAGATGCTTAATTT+TGG - chr3.3:33128487-33128506 MS.gene89385:CDS 30.0%
!! GGCTTTAAAAAATCTGAAAG+AGG - chr3.3:33128327-33128346 MS.gene89385:CDS 30.0%
AAAATTCATCAAAGCCCGAT+TGG - chr3.3:33127723-33127742 MS.gene89385:CDS 35.0%
AAAGAGATGAGCAAGGTTAT+CGG - chr3.3:33128697-33128716 MS.gene89385:CDS 35.0%
AAATTCATCAAAGCCCGATT+GGG - chr3.3:33127724-33127743 MS.gene89385:CDS 35.0%
AAGAAACATATGCTCCAAGA+TGG + chr3.3:33127830-33127849 None:intergenic 35.0%
ACATTTGTAGTCCACCAAAT+TGG - chr3.3:33127894-33127913 MS.gene89385:CDS 35.0%
AGAAACATATGCTCCAAGAT+GGG + chr3.3:33127829-33127848 None:intergenic 35.0%
AGCCATTCATCAAATTGGTA+AGG - chr3.3:33127573-33127592 MS.gene89385:CDS 35.0%
AGCCTTACCAATTTGATGAA+TGG + chr3.3:33127578-33127597 None:intergenic 35.0%
ATCTGTTCTGTTCATAGGAT+TGG - chr3.3:33128225-33128244 MS.gene89385:CDS 35.0%
ATGAAGAAAACAACCCTGAT+TGG - chr3.3:33128164-33128183 MS.gene89385:CDS 35.0%
ATTGATCTAGCAAATTCGGA+AGG + chr3.3:33128528-33128547 None:intergenic 35.0%
ATTGGGTGAAAATCAAGACA+TGG - chr3.3:33128182-33128201 MS.gene89385:CDS 35.0%
CAATTTGATGAATGGCTCAA+GGG + chr3.3:33127570-33127589 None:intergenic 35.0%
CTAATTCAGTTAGATCTTGC+TGG + chr3.3:33128270-33128289 None:intergenic 35.0%
CTATGATATTACAAGTGGCT+GGG - chr3.3:33127751-33127770 MS.gene89385:CDS 35.0%
CTTTAATCCACCTAAGGATA+AGG - chr3.3:33127847-33127866 MS.gene89385:CDS 35.0%
GGTACATTTGAATTACCAGA+TGG - chr3.3:33128349-33128368 MS.gene89385:CDS 35.0%
GTGAAAATCAAGACATGGTT+GGG - chr3.3:33128187-33128206 MS.gene89385:CDS 35.0%
TCTATGATATTACAAGTGGC+TGG - chr3.3:33127750-33127769 MS.gene89385:CDS 35.0%
TCTGTTCTGTTCATAGGATT+GGG - chr3.3:33128226-33128245 MS.gene89385:CDS 35.0%
TGAAGAAAACAACCCTGATT+GGG - chr3.3:33128165-33128184 MS.gene89385:CDS 35.0%
TTGATCTAGCAAATTCGGAA+GGG + chr3.3:33128527-33128546 None:intergenic 35.0%
! ATGTTTTCCAAACAGTACCA+CGG + chr3.3:33128396-33128415 None:intergenic 35.0%
! GATCTAACTGAATTAGCTCT+TGG - chr3.3:33128274-33128293 MS.gene89385:CDS 35.0%
! GGCATGCGATCAATATTTTT+GGG + chr3.3:33127533-33127552 None:intergenic 35.0%
! TCTTGATTTTCACCCAATCA+GGG + chr3.3:33128180-33128199 None:intergenic 35.0%
! TTAACTGGTAAAAAGCACAC+TGG + chr3.3:33127805-33127824 None:intergenic 35.0%
! TTCTGGGTTACCTTTCTTTT+GGG - chr3.3:33128306-33128325 MS.gene89385:CDS 35.0%
! TTTCTGGGTTACCTTTCTTT+TGG - chr3.3:33128305-33128324 MS.gene89385:CDS 35.0%
!! AAGAGCACTAGTAGAAAAGA+AGG - chr3.3:33128558-33128577 MS.gene89385:CDS 35.0%
!! GCATGCGATCAATATTTTTG+GGG + chr3.3:33127532-33127551 None:intergenic 35.0%
!!! CATACTTCCTTTTTTCGAGT+TGG - chr3.3:33127460-33127479 MS.gene89385:CDS 35.0%
!!! CATGCGATCAATATTTTTGG+GGG + chr3.3:33127531-33127550 None:intergenic 35.0%
!!! GTTTTGAAAGGAAGCCAATT+TGG + chr3.3:33127911-33127930 None:intergenic 35.0%
AGGTAGCTATTGAGATACCA+AGG - chr3.3:33128578-33128597 MS.gene89385:CDS 40.0%
ATCTTGGCCAACTCGAAAAA+AGG + chr3.3:33127470-33127489 None:intergenic 40.0%
ATGAATGGCTCAAGGGATTT+GGG + chr3.3:33127563-33127582 None:intergenic 40.0%
ATGAGCCATCTTAAGGTAAC+GGG + chr3.3:33127669-33127688 None:intergenic 40.0%
ATGTCTTCCGCCGTTAAATT+TGG + chr3.3:33127878-33127897 None:intergenic 40.0%
ATGTGTCCCATAGCTAGAAA+TGG + chr3.3:33127443-33127462 None:intergenic 40.0%
CATGAGCCATCTTAAGGTAA+CGG + chr3.3:33127670-33127689 None:intergenic 40.0%
CCAATTTGATGAATGGCTCA+AGG + chr3.3:33127571-33127590 None:intergenic 40.0%
CCATCATCTGTTCTGTTCAT+AGG - chr3.3:33128220-33128239 MS.gene89385:CDS 40.0%
CCTATGAACAGAACAGATGA+TGG + chr3.3:33128223-33128242 None:intergenic 40.0%
CCTTGAGCCATTCATCAAAT+TGG - chr3.3:33127568-33127587 MS.gene89385:CDS 40.0%
CTACCTTTACCACGTATAGA+GGG - chr3.3:33127596-33127615 MS.gene89385:CDS 40.0%
GAAACATATGCTCCAAGATG+GGG + chr3.3:33127828-33127847 None:intergenic 40.0%
GATTCCATTGCTAATGAGGA+TGG - chr3.3:33127389-33127408 MS.gene89385:CDS 40.0%
GCAAGATGGGACATTAACTA+AGG - chr3.3:33128606-33128625 MS.gene89385:CDS 40.0%
GCCAAGATTCTTGCTCAAAA+GGG - chr3.3:33127482-33127501 MS.gene89385:CDS 40.0%
GGTGAAAATCAAGACATGGT+TGG - chr3.3:33128186-33128205 MS.gene89385:CDS 40.0%
GTCACCTCAACAGAAGATAT+TGG - chr3.3:33128417-33128436 MS.gene89385:CDS 40.0%
GTGGTACTGTTTGGAAAACA+TGG - chr3.3:33128395-33128414 MS.gene89385:CDS 40.0%
TACCTTAAGATGGCTCATGA+GGG - chr3.3:33127671-33127690 MS.gene89385:CDS 40.0%
TCAGCCAATATCTTCTGTTG+AGG + chr3.3:33128424-33128443 None:intergenic 40.0%
TGTGTCCCATAGCTAGAAAT+GGG + chr3.3:33127442-33127461 None:intergenic 40.0%
TTACCTTAAGATGGCTCATG+AGG - chr3.3:33127670-33127689 MS.gene89385:CDS 40.0%
TTCAACGTCTCTTATCTGCA+TGG + chr3.3:33128143-33128162 None:intergenic 40.0%
TTGAAAGGAAGCCAATTTGG+TGG + chr3.3:33127908-33127927 None:intergenic 40.0%
TTGGCAATAGTTCATGAGGA+GGG - chr3.3:33128652-33128671 MS.gene89385:CDS 40.0%
TTTACCAGTTAACCCCATCT+TGG - chr3.3:33127813-33127832 MS.gene89385:CDS 40.0%
! AAAAAGCACACTGGATGTTG+AGG + chr3.3:33127796-33127815 None:intergenic 40.0%
! AAGAACCTCTAGAGAACTTG+AGG - chr3.3:33128051-33128070 MS.gene89385:CDS 40.0%
! ACAGAAGATATTGGCTGATG+CGG - chr3.3:33128426-33128445 MS.gene89385:CDS 40.0%
! ACCCTTTTGAGCAAGAATCT+TGG + chr3.3:33127486-33127505 None:intergenic 40.0%
! AGAACCTCTAGAGAACTTGA+GGG - chr3.3:33128052-33128071 MS.gene89385:CDS 40.0%
! GGGCATGCGATCAATATTTT+TGG + chr3.3:33127534-33127553 None:intergenic 40.0%
! GTCTTGATTTTCACCCAATC+AGG + chr3.3:33128181-33128200 None:intergenic 40.0%
! TGAATTACCAGATGGGTTTG+AGG - chr3.3:33128357-33128376 MS.gene89385:CDS 40.0%
!! ATGCTCCCATTTCTAGCTAT+GGG - chr3.3:33127434-33127453 MS.gene89385:CDS 40.0%
!! ATGTTGAGGCTTTTGGCTAT+TGG + chr3.3:33127782-33127801 None:intergenic 40.0%
!! TTTGGCTTGACCTTATCCTT+AGG + chr3.3:33127860-33127879 None:intergenic 40.0%
!!! ATTTTTGGGGGTGTTTACGA+AGG + chr3.3:33127519-33127538 None:intergenic 40.0%
AACCCTCATGAGCCATCTTA+AGG + chr3.3:33127676-33127695 None:intergenic 45.0%
ACGTCTCTTATCTGCATGGA+TGG + chr3.3:33128139-33128158 None:intergenic 45.0%
AGTCCCTCTATACGTGGTAA+AGG + chr3.3:33127602-33127621 None:intergenic 45.0%
ATACCAAGGAGTGAGCAAGA+TGG - chr3.3:33128592-33128611 MS.gene89385:CDS 45.0%
CAACGCAAAAGAGATGAGCA+AGG - chr3.3:33128690-33128709 MS.gene89385:CDS 45.0%
CTAGAGAACTTGAGGGAGAA+TGG - chr3.3:33128059-33128078 MS.gene89385:CDS 45.0%
CTCAGCTCTTAAAGACGAGT+CGG - chr3.3:33127970-33127989 MS.gene89385:CDS 45.0%
CTCTTGGAATCGAGCTTTCT+GGG - chr3.3:33128290-33128309 MS.gene89385:CDS 45.0%
GAGGTTGGCAATAGTTCATG+AGG - chr3.3:33128648-33128667 MS.gene89385:CDS 45.0%
GATGAATGGCTCAAGGGATT+TGG + chr3.3:33127564-33127583 None:intergenic 45.0%
GCTACCTTTACCACGTATAG+AGG - chr3.3:33127595-33127614 MS.gene89385:CDS 45.0%
GGCCAAGATTCTTGCTCAAA+AGG - chr3.3:33127481-33127500 MS.gene89385:CDS 45.0%
GGTCAAGCCAAATTTAACGG+CGG - chr3.3:33127868-33127887 MS.gene89385:CDS 45.0%
GTTCTATCCTCAAACCCATC+TGG + chr3.3:33128367-33128386 None:intergenic 45.0%
GTTGCCATCCTCATTAGCAA+TGG + chr3.3:33127396-33127415 None:intergenic 45.0%
GTTGGCAATAGTTCATGAGG+AGG - chr3.3:33128651-33128670 MS.gene89385:CDS 45.0%
TACCAAGGAGTGAGCAAGAT+GGG - chr3.3:33128593-33128612 MS.gene89385:CDS 45.0%
TCAGCTCTTAAAGACGAGTC+GGG - chr3.3:33127971-33127990 MS.gene89385:CDS 45.0%
TCTCTTATCTGCATGGATGG+TGG + chr3.3:33128136-33128155 None:intergenic 45.0%
TGAATGGCTCAAGGGATTTG+GGG + chr3.3:33127562-33127581 None:intergenic 45.0%
TTCTCCCTCAAGTTCTCTAG+AGG + chr3.3:33128059-33128078 None:intergenic 45.0%
! ACACTGGATGTTGAGGCTTT+TGG + chr3.3:33127789-33127808 None:intergenic 45.0%
! ATATTGGCTGATGCGGCAAT+TGG - chr3.3:33128433-33128452 MS.gene89385:CDS 45.0%
! GGTGTTGGATGAAATGTCCA+TGG + chr3.3:33127645-33127664 None:intergenic 45.0%
! TATTGGCTGATGCGGCAATT+GGG - chr3.3:33128434-33128453 MS.gene89385:CDS 45.0%
! TCAAGGGATTTGGGGGTTTT+GGG + chr3.3:33127554-33127573 None:intergenic 45.0%
!! GATGCTCCCATTTCTAGCTA+TGG - chr3.3:33127433-33127452 MS.gene89385:CDS 45.0%
AGAGTGTAGCACAGACGTTG+AGG - chr3.3:33128629-33128648 MS.gene89385:CDS 50.0%
ATTGGCTGATGCGGCAATTG+GGG - chr3.3:33128435-33128454 MS.gene89385:CDS 50.0%
CACCACCCGTTACCTTAAGA+TGG - chr3.3:33127661-33127680 MS.gene89385:CDS 50.0%
CCAAACAGTACCACGGTCTT+TGG + chr3.3:33128389-33128408 None:intergenic 50.0%
CCAAAGACCGTGGTACTGTT+TGG - chr3.3:33128386-33128405 MS.gene89385:CDS 50.0%
GAATGGCTCAAGGGATTTGG+GGG + chr3.3:33127561-33127580 None:intergenic 50.0%
GAGGATAGAACCAAAGACCG+TGG - chr3.3:33128376-33128395 MS.gene89385:CDS 50.0%
GCTCTTGGAATCGAGCTTTC+TGG - chr3.3:33128289-33128308 MS.gene89385:CDS 50.0%
GGCTTGACCTTATCCTTAGG+TGG + chr3.3:33127857-33127876 None:intergenic 50.0%
GGGGGTTGCATTTGTCATTG+TGG - chr3.3:33128454-33128473 MS.gene89385:CDS 50.0%
TGCTCCAAGATGGGGTTAAC+TGG + chr3.3:33127820-33127839 None:intergenic 50.0%
TGTAGCACAGACGTTGAGGT+TGG - chr3.3:33128633-33128652 MS.gene89385:CDS 50.0%
! CTCAAGGGATTTGGGGGTTT+TGG + chr3.3:33127555-33127574 None:intergenic 50.0%
!! AGCCATCTTAAGGTAACGGG+TGG + chr3.3:33127666-33127685 None:intergenic 50.0%
!! CTTAAGGTAACGGGTGGTGT+TGG + chr3.3:33127660-33127679 None:intergenic 50.0%
!! GGGAGCATCACAACATGAAG+AGG + chr3.3:33127422-33127441 None:intergenic 50.0%
AACGTGCCTGTGGTTCCAGT+GGG - chr3.3:33128103-33128122 MS.gene89385:CDS 55.0%
ATGGTGCTCTCTGCACCTTC+TGG + chr3.3:33127626-33127645 None:intergenic 55.0%
CGTATAGAGGGACTCCCAGA+AGG - chr3.3:33127608-33127627 MS.gene89385:CDS 55.0%
CTCTTACCTGAACGTGCCTG+TGG - chr3.3:33128093-33128112 MS.gene89385:CDS 55.0%
GTCCCATCTTGCTCACTCCT+TGG + chr3.3:33128598-33128617 None:intergenic 55.0%
TCTGGGAGTCCCTCTATACG+TGG + chr3.3:33127608-33127627 None:intergenic 55.0%
TGGTGCTCTCTGCACCTTCT+GGG + chr3.3:33127625-33127644 None:intergenic 55.0%
TTGGCTGATGCGGCAATTGG+GGG - chr3.3:33128436-33128455 MS.gene89385:CDS 55.0%
!! AGAAGGTGCAGAGAGCACCA+TGG - chr3.3:33127625-33127644 MS.gene89385:CDS 55.0%
ACGTGCCTGTGGTTCCAGTG+GGG - chr3.3:33128104-33128123 MS.gene89385:CDS 60.0%
AGCAACCCCACTGGAACCAC+AGG + chr3.3:33128112-33128131 None:intergenic 60.0%
CTGGAACCACAGGCACGTTC+AGG + chr3.3:33128102-33128121 None:intergenic 60.0%
GAACGTGCCTGTGGTTCCAG+TGG - chr3.3:33128102-33128121 MS.gene89385:CDS 60.0%
TAGGATTGGGCAGCGAGTCG+AGG - chr3.3:33128239-33128258 MS.gene89385:CDS 60.0%
!! GATGGTGGAAGCAACCCCAC+TGG + chr3.3:33128121-33128140 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 33127386 33128798 33127386 ID=MS.gene89385
chr3.3 mRNA 33127386 33128798 33127386 ID=MS.gene89385.t1;Parent=MS.gene89385
chr3.3 exon 33127386 33128798 33127386 ID=MS.gene89385.t1.exon1;Parent=MS.gene89385.t1
chr3.3 CDS 33127386 33128798 33127386 ID=cds.MS.gene89385.t1;Parent=MS.gene89385.t1
Gene Sequence

>MS.gene89385

ATGGATTCCATTGCTAATGAGGATGGCAACAAACCTCTTCATGTTGTGATGCTCCCATTTCTAGCTATGGGACACATACTTCCTTTTTTCGAGTTGGCCAAGATTCTTGCTCAAAAGGGTCACTTTGTAACCTTCGTAAACACCCCCAAAAATATTGATCGCATGCCCAAAACCCCCAAATCCCTTGAGCCATTCATCAAATTGGTAAGGCTACCTTTACCACGTATAGAGGGACTCCCAGAAGGTGCAGAGAGCACCATGGACATTTCATCCAACACCACCCGTTACCTTAAGATGGCTCATGAGGGTTTTCAAGACGATGTAACTAAGATACTCAAAAATTCATCAAAGCCCGATTGGGTTTTCTATGATATTACAAGTGGCTGGGTAGCACCAATAGCCAAAAGCCTCAACATCCAGTGTGCTTTTTACCAGTTAACCCCATCTTGGAGCATATGTTTCTTTAATCCACCTAAGGATAAGGTCAAGCCAAATTTAACGGCGGAAGACATTTGTAGTCCACCAAATTGGCTTCCTTTCAAAACAACTATTCATTTCAAGCCTTATGAGCTTATTAGAGCATTCTCAGCTCTTAAAGACGAGTCGGGAAAAATGCCTGATTCTGATTATAATCAACTAAATTCAAGTTGTGACATACTTCTTCTAAGAACCTCTAGAGAACTTGAGGGAGAATGGTTAGATTATGTCTCTTACCTGAACGTGCCTGTGGTTCCAGTGGGGTTGCTTCCACCATCCATGCAGATAAGAGACGTTGAAGATGAAGAAAACAACCCTGATTGGGTGAAAATCAAGACATGGTTGGGAACAAGAGAACCATCATCTGTTCTGTTCATAGGATTGGGCAGCGAGTCGAGGCTTAGCCAGCAAGATCTAACTGAATTAGCTCTTGGAATCGAGCTTTCTGGGTTACCTTTCTTTTGGGCTTTAAAAAATCTGAAAGAGGGTACATTTGAATTACCAGATGGGTTTGAGGATAGAACCAAAGACCGTGGTACTGTTTGGAAAACATGGTCACCTCAACAGAAGATATTGGCTGATGCGGCAATTGGGGGTTGCATTTGTCATTGTGGTGCAAGTTCTGTCATTGAGATGCTTAATTTTGGGCACGTTCTTGTTACCCTTCCGAATTTGCTAGATCAATGTCTGTTTTCAAGAGCACTAGTAGAAAAGAAGGTAGCTATTGAGATACCAAGGAGTGAGCAAGATGGGACATTAACTAAGGAGAGTGTAGCACAGACGTTGAGGTTGGCAATAGTTCATGAGGAGGGAAGTGCTTATAGAAACAACGCAAAAGAGATGAGCAAGGTTATCGGTTCAAAAGATCTTCACAATCAGTACATTGAAGATTTCATTGCGATTCTTCATAAGTATAGAGTTCATTCCGACAATTAA
Protein sequence

>MS.gene89385.t1

MDSIANEDGNKPLHVVMLPFLAMGHILPFFELAKILAQKGHFVTFVNTPKNIDRMPKTPKSLEPFIKLVRLPLPRIEGLPEGAESTMDISSNTTRYLKMAHEGFQDDVTKILKNSSKPDWVFYDITSGWVAPIAKSLNIQCAFYQLTPSWSICFFNPPKDKVKPNLTAEDICSPPNWLPFKTTIHFKPYELIRAFSALKDESGKMPDSDYNQLNSSCDILLLRTSRELEGEWLDYVSYLNVPVVPVGLLPPSMQIRDVEDEENNPDWVKIKTWLGTREPSSVLFIGLGSESRLSQQDLTELALGIELSGLPFFWALKNLKEGTFELPDGFEDRTKDRGTVWKTWSPQQKILADAAIGGCICHCGASSVIEMLNFGHVLVTLPNLLDQCLFSRALVEKKVAIEIPRSEQDGTLTKESVAQTLRLAIVHEEGSAYRNNAKEMSKVIGSKDLHNQYIEDFIAILHKYRVHSDN