Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058184.t1 | XP_003594821.1 | 92.6 | 230 | 17 | 0 | 1 | 230 | 32 | 261 | 1.60E-118 | 435.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058184.t1 | Q9AT54 | 29.0 | 241 | 156 | 4 | 1 | 230 | 26 | 262 | 4.9e-28 | 126.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058184.t1 | D2D583 | 92.6 | 230 | 17 | 0 | 1 | 230 | 32 | 261 | 1.1e-118 | 435.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058184 | MS.gene058235 | 0.806211 | 9.18E-50 | -1.69E-46 |
MS.gene058184 | MS.gene065047 | 0.856322 | 3.48E-62 | -1.69E-46 |
MS.gene058184 | MS.gene066472 | 0.840069 | 1.09E-57 | -1.69E-46 |
MS.gene058184 | MS.gene071830 | 0.924402 | 7.39E-90 | -1.69E-46 |
MS.gene058184 | MS.gene071831 | 0.926815 | 2.79E-91 | -1.69E-46 |
MS.gene058184 | MS.gene071832 | 0.945293 | 4.01E-104 | -1.69E-46 |
MS.gene058184 | MS.gene53434 | 0.814231 | 1.71E-51 | -1.69E-46 |
MS.gene058184 | MS.gene55991 | 0.812995 | 3.20E-51 | -1.69E-46 |
MS.gene058184 | MS.gene74964 | 0.850334 | 1.82E-60 | -1.69E-46 |
MS.gene058184 | MS.gene76219 | 0.854711 | 1.03E-61 | -1.69E-46 |
MS.gene058184 | MS.gene89385 | 0.813339 | 2.69E-51 | -1.69E-46 |
MS.gene058184 | MS.gene99583 | 0.843334 | 1.49E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058184.t1 | MTR_2g035020 | 92.609 | 230 | 17 | 0 | 1 | 230 | 32 | 261 | 1.57e-150 | 429 |
MS.gene058184.t1 | MTR_2g034990 | 81.223 | 229 | 43 | 0 | 1 | 229 | 32 | 260 | 4.90e-133 | 385 |
MS.gene058184.t1 | MTR_5g029800 | 68.261 | 230 | 69 | 1 | 1 | 230 | 32 | 257 | 1.59e-107 | 320 |
MS.gene058184.t1 | MTR_5g067170 | 67.686 | 229 | 70 | 2 | 1 | 228 | 32 | 257 | 1.78e-106 | 317 |
MS.gene058184.t1 | MTR_7g012120 | 70.130 | 231 | 66 | 2 | 1 | 231 | 37 | 264 | 5.46e-105 | 313 |
MS.gene058184.t1 | MTR_4g117960 | 64.912 | 228 | 78 | 1 | 1 | 228 | 32 | 257 | 9.05e-102 | 305 |
MS.gene058184.t1 | MTR_4g117980 | 60.870 | 230 | 90 | 0 | 1 | 230 | 32 | 261 | 4.33e-95 | 288 |
MS.gene058184.t1 | MTR_6g035185 | 60.526 | 228 | 90 | 0 | 1 | 228 | 32 | 259 | 8.74e-92 | 280 |
MS.gene058184.t1 | MTR_8g032950 | 59.649 | 228 | 89 | 1 | 1 | 228 | 33 | 257 | 7.16e-86 | 264 |
MS.gene058184.t1 | MTR_6g035265 | 56.579 | 228 | 90 | 2 | 1 | 228 | 32 | 250 | 9.14e-85 | 261 |
MS.gene058184.t1 | MTR_2g035040 | 80.282 | 142 | 28 | 0 | 87 | 228 | 23 | 164 | 4.79e-81 | 249 |
MS.gene058184.t1 | MTR_0536s0020 | 51.754 | 228 | 100 | 2 | 1 | 228 | 39 | 256 | 1.14e-79 | 248 |
MS.gene058184.t1 | MTR_4g117890 | 52.193 | 228 | 99 | 2 | 1 | 228 | 34 | 251 | 2.90e-79 | 247 |
MS.gene058184.t1 | MTR_4g117970 | 59.890 | 182 | 69 | 1 | 47 | 228 | 53 | 230 | 8.27e-73 | 229 |
MS.gene058184.t1 | MTR_0536s0010 | 47.660 | 235 | 110 | 3 | 1 | 235 | 42 | 263 | 8.34e-70 | 223 |
MS.gene058184.t1 | MTR_4g118000 | 48.458 | 227 | 104 | 2 | 1 | 227 | 33 | 246 | 1.82e-69 | 221 |
MS.gene058184.t1 | MTR_4g117950 | 46.383 | 235 | 114 | 3 | 1 | 235 | 27 | 249 | 3.09e-66 | 213 |
MS.gene058184.t1 | MTR_0536s0030 | 47.312 | 186 | 88 | 2 | 5 | 190 | 5 | 180 | 7.30e-54 | 178 |
MS.gene058184.t1 | MTR_4g031800 | 37.946 | 224 | 131 | 3 | 1 | 222 | 30 | 247 | 2.20e-46 | 161 |
MS.gene058184.t1 | MTR_4g485630 | 33.193 | 238 | 144 | 5 | 1 | 230 | 30 | 260 | 4.17e-36 | 134 |
MS.gene058184.t1 | MTR_5g039900 | 32.353 | 238 | 147 | 5 | 1 | 228 | 34 | 267 | 6.08e-35 | 131 |
MS.gene058184.t1 | MTR_7g117405 | 35.319 | 235 | 139 | 6 | 1 | 226 | 33 | 263 | 6.49e-35 | 130 |
MS.gene058184.t1 | MTR_2g035050 | 77.108 | 83 | 19 | 0 | 1 | 83 | 32 | 114 | 1.41e-31 | 114 |
MS.gene058184.t1 | MTR_5g016660 | 30.738 | 244 | 151 | 6 | 1 | 230 | 31 | 270 | 1.51e-30 | 119 |
MS.gene058184.t1 | MTR_5g045970 | 32.083 | 240 | 143 | 6 | 1 | 226 | 37 | 270 | 3.58e-30 | 117 |
MS.gene058184.t1 | MTR_6g035295 | 33.054 | 239 | 144 | 6 | 1 | 227 | 33 | 267 | 3.76e-30 | 117 |
MS.gene058184.t1 | MTR_8g066610 | 29.796 | 245 | 153 | 6 | 1 | 230 | 30 | 270 | 8.29e-30 | 117 |
MS.gene058184.t1 | MTR_7g102450 | 31.933 | 238 | 132 | 7 | 1 | 227 | 32 | 250 | 1.31e-29 | 116 |
MS.gene058184.t1 | MTR_7g070740 | 32.245 | 245 | 134 | 8 | 1 | 226 | 32 | 263 | 2.04e-29 | 115 |
MS.gene058184.t1 | MTR_5g045960 | 29.091 | 275 | 175 | 8 | 1 | 259 | 30 | 300 | 2.44e-29 | 115 |
MS.gene058184.t1 | MTR_4g485620 | 29.130 | 230 | 146 | 5 | 1 | 217 | 10 | 235 | 8.12e-29 | 114 |
MS.gene058184.t1 | MTR_8g044140 | 31.579 | 228 | 141 | 6 | 9 | 226 | 6 | 228 | 1.46e-28 | 113 |
MS.gene058184.t1 | MTR_7g070780 | 32.035 | 231 | 126 | 7 | 1 | 213 | 32 | 249 | 2.31e-28 | 112 |
MS.gene058184.t1 | MTR_7g070860 | 32.900 | 231 | 124 | 7 | 1 | 213 | 28 | 245 | 1.60e-27 | 110 |
MS.gene058184.t1 | MTR_7g070660 | 30.672 | 238 | 138 | 6 | 1 | 222 | 32 | 258 | 5.93e-27 | 108 |
MS.gene058184.t1 | MTR_7g070800 | 32.035 | 231 | 126 | 7 | 1 | 213 | 27 | 244 | 7.08e-27 | 108 |
MS.gene058184.t1 | MTR_7g070930 | 31.687 | 243 | 138 | 7 | 1 | 226 | 35 | 266 | 8.56e-27 | 108 |
MS.gene058184.t1 | MTR_1g062380 | 30.579 | 242 | 144 | 8 | 1 | 226 | 37 | 270 | 2.21e-26 | 107 |
MS.gene058184.t1 | MTR_7g070910 | 32.500 | 240 | 140 | 8 | 1 | 226 | 32 | 263 | 2.39e-26 | 107 |
MS.gene058184.t1 | MTR_7g055710 | 29.167 | 240 | 148 | 6 | 1 | 226 | 32 | 263 | 5.42e-26 | 106 |
MS.gene058184.t1 | MTR_5g040030 | 29.412 | 238 | 153 | 7 | 1 | 227 | 35 | 268 | 1.88e-25 | 104 |
MS.gene058184.t1 | MTR_4g485590 | 33.891 | 239 | 117 | 7 | 1 | 228 | 30 | 238 | 1.94e-25 | 103 |
MS.gene058184.t1 | MTR_1g040310 | 30.932 | 236 | 147 | 6 | 1 | 226 | 36 | 265 | 1.96e-25 | 104 |
MS.gene058184.t1 | MTR_7g070610 | 30.041 | 243 | 142 | 7 | 1 | 226 | 34 | 265 | 2.28e-25 | 104 |
MS.gene058184.t1 | MTR_7g071040 | 31.687 | 243 | 138 | 7 | 1 | 226 | 38 | 269 | 3.65e-25 | 103 |
MS.gene058184.t1 | MTR_4g108250 | 30.400 | 250 | 135 | 9 | 1 | 226 | 32 | 266 | 1.16e-24 | 102 |
MS.gene058184.t1 | MTR_7g102550 | 29.630 | 243 | 150 | 8 | 1 | 229 | 30 | 265 | 3.22e-24 | 101 |
MS.gene058184.t1 | MTR_7g102560 | 31.441 | 229 | 139 | 9 | 9 | 227 | 40 | 260 | 3.63e-23 | 98.2 |
MS.gene058184.t1 | MTR_7g070810 | 29.694 | 229 | 148 | 4 | 1 | 220 | 30 | 254 | 6.83e-23 | 97.4 |
MS.gene058184.t1 | MTR_7g070940 | 30.180 | 222 | 142 | 4 | 1 | 213 | 30 | 247 | 1.14e-22 | 96.7 |
MS.gene058184.t1 | MTR_7g102490 | 27.966 | 236 | 156 | 5 | 9 | 233 | 39 | 271 | 8.01e-22 | 94.4 |
MS.gene058184.t1 | MTR_7g102460 | 28.696 | 230 | 149 | 7 | 9 | 227 | 39 | 264 | 2.81e-21 | 92.8 |
MS.gene058184.t1 | MTR_4g024020 | 27.160 | 243 | 162 | 5 | 9 | 239 | 39 | 278 | 4.74e-21 | 92.0 |
MS.gene058184.t1 | MTR_7g070870 | 28.821 | 229 | 147 | 4 | 1 | 220 | 40 | 261 | 1.88e-20 | 90.5 |
MS.gene058184.t1 | MTR_7g071050 | 34.177 | 158 | 94 | 3 | 1 | 156 | 34 | 183 | 6.11e-20 | 88.6 |
MS.gene058184.t1 | MTR_4g485640 | 28.017 | 232 | 150 | 6 | 1 | 228 | 230 | 448 | 1.69e-19 | 87.8 |
MS.gene058184.t1 | MTR_7g102520 | 27.686 | 242 | 153 | 8 | 1 | 228 | 33 | 266 | 5.08e-17 | 80.5 |
MS.gene058184.t1 | MTR_7g039570 | 27.749 | 191 | 119 | 5 | 1 | 178 | 35 | 219 | 2.99e-15 | 73.6 |
MS.gene058184.t1 | MTR_7g470590 | 39.362 | 94 | 54 | 2 | 1 | 91 | 32 | 125 | 2.64e-14 | 68.2 |
MS.gene058184.t1 | MTR_7g070570 | 39.362 | 94 | 54 | 2 | 1 | 91 | 32 | 125 | 2.64e-14 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058184.t1 | AT2G36750 | 31.933 | 238 | 149 | 5 | 1 | 228 | 31 | 265 | 1.47e-32 | 124 |
MS.gene058184.t1 | AT2G36770 | 32.510 | 243 | 146 | 6 | 1 | 230 | 35 | 272 | 7.89e-32 | 122 |
MS.gene058184.t1 | AT2G36780 | 31.950 | 241 | 150 | 6 | 1 | 230 | 35 | 272 | 6.18e-31 | 120 |
MS.gene058184.t1 | AT2G36790 | 31.250 | 240 | 149 | 6 | 1 | 228 | 34 | 269 | 2.19e-29 | 115 |
MS.gene058184.t1 | AT4G34131 | 27.490 | 251 | 162 | 5 | 1 | 235 | 31 | 277 | 1.01e-28 | 114 |
MS.gene058184.t1 | AT2G36760 | 30.165 | 242 | 153 | 6 | 1 | 230 | 35 | 272 | 5.98e-28 | 111 |
MS.gene058184.t1 | AT2G36800 | 31.120 | 241 | 149 | 6 | 1 | 228 | 33 | 269 | 3.78e-27 | 109 |
MS.gene058184.t1 | AT4G34138 | 27.419 | 248 | 155 | 8 | 1 | 230 | 32 | 272 | 2.45e-26 | 107 |
MS.gene058184.t1 | AT4G34135 | 26.122 | 245 | 161 | 6 | 1 | 229 | 32 | 272 | 3.36e-26 | 105 |
MS.gene058184.t1 | AT3G53160 | 30.380 | 237 | 150 | 5 | 5 | 230 | 34 | 266 | 6.57e-26 | 105 |
MS.gene058184.t1 | AT4G34135 | 26.230 | 244 | 160 | 6 | 1 | 228 | 32 | 271 | 1.60e-25 | 104 |
MS.gene058184.t1 | AT3G53150 | 29.630 | 243 | 151 | 8 | 1 | 229 | 43 | 279 | 2.90e-25 | 104 |
MS.gene058184.t1 | AT2G15490 | 26.230 | 244 | 160 | 5 | 1 | 228 | 28 | 267 | 3.73e-21 | 92.4 |
MS.gene058184.t1 | AT2G15490 | 26.230 | 244 | 160 | 5 | 1 | 228 | 28 | 267 | 3.84e-21 | 92.4 |
MS.gene058184.t1 | AT2G15480 | 25.000 | 244 | 163 | 6 | 1 | 228 | 31 | 270 | 7.78e-21 | 91.7 |
MS.gene058184.t1 | AT2G15480 | 25.000 | 244 | 163 | 6 | 1 | 228 | 31 | 270 | 8.30e-21 | 91.7 |
MS.gene058184.t1 | AT2G15490 | 27.219 | 169 | 110 | 3 | 1 | 159 | 28 | 193 | 7.50e-15 | 72.8 |
MS.gene058184.t1 | AT5G14860 | 25.000 | 220 | 148 | 5 | 9 | 215 | 48 | 263 | 1.41e-12 | 67.4 |
Find 90 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCCTCAATGGGTTCTTTA+AGG | 0.162705 | 2.2:-53889932 | None:intergenic |
GTGATATGATGAGGAAAATT+TGG | 0.225535 | 2.2:-53890158 | None:intergenic |
GAGAGATTTGGTAAGGGATT+TGG | 0.310446 | 2.2:-53889769 | None:intergenic |
AGGAATATACTGATTACTTT+TGG | 0.310469 | 2.2:-53890197 | None:intergenic |
TGGTGATGACTGTGACTTGC+TGG | 0.358260 | 2.2:-53889734 | None:intergenic |
AATCCATTGAATGTGATGTT+TGG | 0.379258 | 2.2:-53890038 | None:intergenic |
GACATAGATTCAATACCTTC+AGG | 0.381547 | 2.2:-53889858 | None:intergenic |
TGTAGTCCACAAGGAGTTGT+AGG | 0.382191 | 2.2:+53892008 | MS.gene058184:intron |
AAGCCACGGGTCACAAGGTT+TGG | 0.391800 | 2.2:+53890315 | MS.gene058184:CDS |
TTCTCAGACGAATTCTGATT+CGG | 0.395206 | 2.2:+53890115 | MS.gene058184:CDS |
TTCAGGGAGGCCAACTTGTT+GGG | 0.411612 | 2.2:-53889841 | None:intergenic |
ATCCATTGAATGTGATGTTT+GGG | 0.422834 | 2.2:-53890037 | None:intergenic |
TTGCTTCGCTCATTGCAGAT+AGG | 0.429727 | 2.2:+53891770 | MS.gene058184:CDS |
CTTCAGGGAGGCCAACTTGT+TGG | 0.436665 | 2.2:-53889842 | None:intergenic |
GGTAAGGGATTTGGCATTGG+AGG | 0.440655 | 2.2:-53889760 | None:intergenic |
CCACGAGGGAGACCGCAAAA+AGG | 0.443540 | 2.2:-53890064 | None:intergenic |
GGATTTGGCATTGGAGGGAG+TGG | 0.443835 | 2.2:-53889754 | None:intergenic |
AACAACTTCAGTGAACTTGA+TGG | 0.445199 | 2.2:+53890266 | MS.gene058184:CDS |
ATGGATCTTCCAAGTGGTGG+TGG | 0.451888 | 2.2:-53889895 | None:intergenic |
ATCCCAAACATCACATTCAA+TGG | 0.454131 | 2.2:+53890035 | MS.gene058184:CDS |
CCAAGTGGTGGTGGGGTCAG+TGG | 0.459253 | 2.2:-53889886 | None:intergenic |
CTCATTGCAGATAGGACTGC+AGG | 0.461424 | 2.2:+53891778 | MS.gene058184:CDS |
GAAATCAGAGAGGGGAGATG+AGG | 0.464698 | 2.2:+53890379 | MS.gene058184:CDS |
AGTGGTGGTGGGGTCAGTGG+TGG | 0.467858 | 2.2:-53889883 | None:intergenic |
GACTGTGACTTGCTGGCCAC+GGG | 0.470228 | 2.2:-53889727 | None:intergenic |
ATTCGCAATGAATTCCTCAA+TGG | 0.474451 | 2.2:-53889943 | None:intergenic |
GTAAGGGATTTGGCATTGGA+GGG | 0.477173 | 2.2:-53889759 | None:intergenic |
GGTCACAAGGTTTGGCATCT+CGG | 0.478074 | 2.2:+53890323 | MS.gene058184:CDS |
CTCTATTCTTGTAGTCCACA+AGG | 0.478474 | 2.2:+53891999 | MS.gene058184:intron |
AGCGTCGGATGAGAGAGATT+TGG | 0.482822 | 2.2:-53889781 | None:intergenic |
TTTGGTAAGGGATTTGGCAT+TGG | 0.485339 | 2.2:-53889763 | None:intergenic |
AAAGTAATCAGTATATTCCT+AGG | 0.485899 | 2.2:+53890200 | MS.gene058184:CDS |
TTCGCAATGAATTCCTCAAT+GGG | 0.487693 | 2.2:-53889942 | None:intergenic |
CGGATGAGAGAGATTTGGTA+AGG | 0.496224 | 2.2:-53889776 | None:intergenic |
CCACCACTTGGAAGATCCAT+CGG | 0.501403 | 2.2:+53889898 | MS.gene058184:CDS |
TGACTGTGACTTGCTGGCCA+CGG | 0.504958 | 2.2:-53889728 | None:intergenic |
GTACCCATGGGTTAATGACT+TGG | 0.505190 | 2.2:+53889998 | MS.gene058184:CDS |
CCGTATCAAGCATCATTCCT+AGG | 0.506058 | 2.2:-53890217 | None:intergenic |
AAATCAGAGAGGGGAGATGA+GGG | 0.509515 | 2.2:+53890380 | MS.gene058184:CDS |
CCTCATCATATCACCTTGTG+TGG | 0.513929 | 2.2:+53890167 | MS.gene058184:CDS |
GGAGGCCAACTTGTTGGGAG+GGG | 0.519861 | 2.2:-53889836 | None:intergenic |
CACCACTTGGAAGATCCATC+GGG | 0.519940 | 2.2:+53889899 | MS.gene058184:CDS |
TGGATCTTCCAAGTGGTGGT+GGG | 0.523168 | 2.2:-53889894 | None:intergenic |
ACATAGATTCAATACCTTCA+GGG | 0.524249 | 2.2:-53889857 | None:intergenic |
CCACTGACCCCACCACCACT+TGG | 0.535873 | 2.2:+53889886 | MS.gene058184:CDS |
ACGAAGGAACGAGGAAGCGT+CGG | 0.539319 | 2.2:-53889796 | None:intergenic |
TCTCCGACTCCACGTACCCA+TGG | 0.539468 | 2.2:+53889985 | MS.gene058184:CDS |
AACCCATGGGTACGTGGAGT+CGG | 0.549921 | 2.2:-53889988 | None:intergenic |
CCTAGGAATGATGCTTGATA+CGG | 0.551910 | 2.2:+53890217 | MS.gene058184:CDS |
CGAGAAAGCCACGGGTCACA+AGG | 0.555062 | 2.2:+53890310 | MS.gene058184:CDS |
GGGAGGCCAACTTGTTGGGA+GGG | 0.556374 | 2.2:-53889837 | None:intergenic |
ATTCATTGCGAATGGTCCAC+CGG | 0.556564 | 2.2:+53889953 | MS.gene058184:CDS |
CAGATAGGACTGCAGGGGTG+TGG | 0.560156 | 2.2:+53891785 | MS.gene058184:CDS |
GAATCAGAATTCGTCTGAGA+AGG | 0.565459 | 2.2:-53890113 | None:intergenic |
GGATCTTCCAAGTGGTGGTG+GGG | 0.566606 | 2.2:-53889893 | None:intergenic |
ATTGAGGAATTCATTGCGAA+TGG | 0.570383 | 2.2:+53889945 | MS.gene058184:CDS |
CAACAAGTTGGCCTCCCTGA+AGG | 0.571124 | 2.2:+53889843 | MS.gene058184:CDS |
AGGAAAATTTGGAATGACAA+AGG | 0.571579 | 2.2:-53890147 | None:intergenic |
CCACACAAGGTGATATGATG+AGG | 0.573323 | 2.2:-53890167 | None:intergenic |
TAAGGAGCATTGCGCCCCGA+TGG | 0.573404 | 2.2:-53889914 | None:intergenic |
CTCCGACTCCACGTACCCAT+GGG | 0.577508 | 2.2:+53889986 | MS.gene058184:CDS |
TGCTCAAGAGAAATCAGAGA+GGG | 0.579153 | 2.2:+53890370 | MS.gene058184:CDS |
TCGGCCAAGTCATTAACCCA+TGG | 0.580088 | 2.2:-53890002 | None:intergenic |
GACTTCCCCTCCCAACAAGT+TGG | 0.588648 | 2.2:+53889831 | MS.gene058184:CDS |
TGTGGTGGGTCAGGACATGT+CGG | 0.590010 | 2.2:+53891741 | MS.gene058184:intron |
GTCATTAACCCATGGGTACG+TGG | 0.590341 | 2.2:-53889994 | None:intergenic |
GTTTGGGATCTGAAAATTGT+CGG | 0.591378 | 2.2:-53890021 | None:intergenic |
CGGCCAAGTCATTAACCCAT+GGG | 0.593579 | 2.2:-53890001 | None:intergenic |
CCGATGGATCTTCCAAGTGG+TGG | 0.606081 | 2.2:-53889898 | None:intergenic |
GAGTCGGAGATGATACAATC+CGG | 0.612602 | 2.2:-53889972 | None:intergenic |
AGGGAGGCCAACTTGTTGGG+AGG | 0.612727 | 2.2:-53889838 | None:intergenic |
GGATGAGAGAGATTTGGTAA+GGG | 0.615398 | 2.2:-53889775 | None:intergenic |
CAACACTACGAGAAAGCCAC+GGG | 0.615738 | 2.2:+53890302 | MS.gene058184:CDS |
GCTCCTTAAAGAACCCATTG+AGG | 0.617034 | 2.2:+53889929 | MS.gene058184:CDS |
TCATTGCAGATAGGACTGCA+GGG | 0.617178 | 2.2:+53891779 | MS.gene058184:CDS |
TGTAATCCTACAACTCCTTG+TGG | 0.618507 | 2.2:-53892014 | None:intergenic |
ATGCCAAACCTTGTGACCCG+TGG | 0.621670 | 2.2:-53890318 | None:intergenic |
GGTGGGTCAGGACATGTCGG+TGG | 0.651950 | 2.2:+53891744 | MS.gene058184:intron |
ACAACACTACGAGAAAGCCA+CGG | 0.654822 | 2.2:+53890301 | MS.gene058184:CDS |
GGTGTGAAGACGAAGGAACG+AGG | 0.655758 | 2.2:-53889805 | None:intergenic |
GCCCCGATGGATCTTCCAAG+TGG | 0.657039 | 2.2:-53889901 | None:intergenic |
GCAACTATGATTGCATCCCG+TGG | 0.661382 | 2.2:+53889711 | None:intergenic |
CATTGCAGATAGGACTGCAG+GGG | 0.683306 | 2.2:+53891780 | MS.gene058184:CDS |
TCGGAGATGATACAATCCGG+TGG | 0.689005 | 2.2:-53889969 | None:intergenic |
AGTCGACGGTGTGAAGACGA+AGG | 0.696351 | 2.2:-53889812 | None:intergenic |
GCTCAAGAGAAATCAGAGAG+GGG | 0.703834 | 2.2:+53890371 | MS.gene058184:CDS |
TTGTTGGGAGGGGAAGTCGA+CGG | 0.707653 | 2.2:-53889826 | None:intergenic |
CTGCTCAAGAGAAATCAGAG+AGG | 0.724696 | 2.2:+53890369 | MS.gene058184:CDS |
ACCACTTGGAAGATCCATCG+GGG | 0.734169 | 2.2:+53889900 | MS.gene058184:CDS |
TAGATTCAATACCTTCAGGG+AGG | 0.748589 | 2.2:-53889854 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTGAATCAAAACAATTA+AGG | - | chr2.2:53891340-53891359 | None:intergenic | 15.0% |
!!! | AATTGTTTTGATTCAATTTT+TGG | + | chr2.2:53891341-53891360 | MS.gene058184:intron | 15.0% |
!!! | TTTAAATCTATAGATTTTGT+GGG | + | chr2.2:53891522-53891541 | MS.gene058184:intron | 15.0% |
!!! | TTTTAAATCTATAGATTTTG+TGG | + | chr2.2:53891521-53891540 | MS.gene058184:intron | 15.0% |
!! | ATAGCGAATAAAACAATTTA+GGG | - | chr2.2:53891588-53891607 | None:intergenic | 20.0% |
!! | GCTATCATTAGATTATATAT+TGG | + | chr2.2:53891863-53891882 | MS.gene058184:intron | 20.0% |
!! | TATAGCGAATAAAACAATTT+AGG | - | chr2.2:53891589-53891608 | None:intergenic | 20.0% |
!!! | AAGTAAATTGTTTGTTTTGA+GGG | - | chr2.2:53890093-53890112 | None:intergenic | 20.0% |
!!! | AATAAAAAAACCAGTTTTAC+AGG | - | chr2.2:53891503-53891522 | None:intergenic | 20.0% |
! | AAAAAGAAGAAGAAAAAGAC+AGG | - | chr2.2:53891550-53891569 | None:intergenic | 25.0% |
! | AAAGTAATCAGTATATTCCT+AGG | + | chr2.2:53890200-53890219 | MS.gene058184:CDS | 25.0% |
! | ATAGTTGTTTATCAGAGAAA+TGG | - | chr2.2:53890490-53890509 | None:intergenic | 25.0% |
! | TAGCGAATAAAACAATTTAG+GGG | - | chr2.2:53891587-53891606 | None:intergenic | 25.0% |
! | TGATAAACAACTATATGAGA+TGG | + | chr2.2:53890496-53890515 | MS.gene058184:intron | 25.0% |
!!! | AATATACTGATTACTTTTGG+CGG | - | chr2.2:53890197-53890216 | None:intergenic | 25.0% |
!!! | AGGAATATACTGATTACTTT+TGG | - | chr2.2:53890200-53890219 | None:intergenic | 25.0% |
!!! | GAAGTAAATTGTTTGTTTTG+AGG | - | chr2.2:53890094-53890113 | None:intergenic | 25.0% |
AATCCATTGAATGTGATGTT+TGG | - | chr2.2:53890041-53890060 | None:intergenic | 30.0% | |
ACAAATTATGACATTGAGCA+AGG | - | chr2.2:53891901-53891920 | None:intergenic | 30.0% | |
ACATAGATTCAATACCTTCA+GGG | - | chr2.2:53889860-53889879 | None:intergenic | 30.0% | |
ATCCATTGAATGTGATGTTT+GGG | - | chr2.2:53890040-53890059 | None:intergenic | 30.0% | |
CAAAGCCAACAAATCATTAT+AGG | - | chr2.2:53891035-53891054 | None:intergenic | 30.0% | |
CAATGAATTTCTTTCATCTC+TGG | + | chr2.2:53891626-53891645 | MS.gene058184:intron | 30.0% | |
GACTTCAAATTCATGAAAGT+CGG | - | chr2.2:53891827-53891846 | None:intergenic | 30.0% | |
GATCCATCGAAAAAATACAA+CGG | - | chr2.2:53891681-53891700 | None:intergenic | 30.0% | |
GATTTGAAGAGAGAAACATT+GGG | + | chr2.2:53890624-53890643 | MS.gene058184:intron | 30.0% | |
GTGATATGATGAGGAAAATT+TGG | - | chr2.2:53890161-53890180 | None:intergenic | 30.0% | |
GTGATGAAGCTAAAAATATC+AGG | + | chr2.2:53890951-53890970 | MS.gene058184:intron | 30.0% | |
TTCGCTATACATATCAAGTT+TGG | + | chr2.2:53891600-53891619 | MS.gene058184:intron | 30.0% | |
! | AACTTTTCCTAATAACATCG+TGG | + | chr2.2:53891146-53891165 | MS.gene058184:intron | 30.0% |
! | AGGAAAATTTGGAATGACAA+AGG | - | chr2.2:53890150-53890169 | None:intergenic | 30.0% |
AAAACATTCACACTTCTGCT+TGG | - | chr2.2:53891177-53891196 | None:intergenic | 35.0% | |
AACAACTTCAGTGAACTTGA+TGG | + | chr2.2:53890266-53890285 | MS.gene058184:CDS | 35.0% | |
AAGAAGGGTTTGATCATTAG+GGG | + | chr2.2:53890647-53890666 | MS.gene058184:intron | 35.0% | |
AAGAAGTCGCTTGAATTCAT+AGG | - | chr2.2:53891208-53891227 | None:intergenic | 35.0% | |
AAGAATTGATCTCCATGAAC+CGG | - | chr2.2:53890788-53890807 | None:intergenic | 35.0% | |
AAGGAAGAATCCTGTAAAAC+TGG | + | chr2.2:53891490-53891509 | MS.gene058184:intron | 35.0% | |
ACAATTTAGGGGCTAATCTT+TGG | - | chr2.2:53891576-53891595 | None:intergenic | 35.0% | |
ATCCCAAACATCACATTCAA+TGG | + | chr2.2:53890035-53890054 | MS.gene058184:CDS | 35.0% | |
ATTCGCAATGAATTCCTCAA+TGG | - | chr2.2:53889946-53889965 | None:intergenic | 35.0% | |
ATTGAGGAATTCATTGCGAA+TGG | + | chr2.2:53889945-53889964 | MS.gene058184:CDS | 35.0% | |
GAAGAAGGGTTTGATCATTA+GGG | + | chr2.2:53890646-53890665 | MS.gene058184:intron | 35.0% | |
GACATAGATTCAATACCTTC+AGG | - | chr2.2:53889861-53889880 | None:intergenic | 35.0% | |
GGATTTGAAGAGAGAAACAT+TGG | + | chr2.2:53890623-53890642 | MS.gene058184:intron | 35.0% | |
GTTTATGTCAACACTTCTCT+CGG | + | chr2.2:53891432-53891451 | MS.gene058184:intron | 35.0% | |
TCGAAAAAATACAACGGTGT+TGG | - | chr2.2:53891675-53891694 | None:intergenic | 35.0% | |
TGAATTAATCATCCAGCTTG+AGG | - | chr2.2:53891102-53891121 | None:intergenic | 35.0% | |
TTCGCAATGAATTCCTCAAT+GGG | - | chr2.2:53889945-53889964 | None:intergenic | 35.0% | |
TTCTCAGACGAATTCTGATT+CGG | + | chr2.2:53890115-53890134 | MS.gene058184:CDS | 35.0% | |
TTTACAGTCGTCGTACTTAA+AGG | + | chr2.2:53891471-53891490 | MS.gene058184:intron | 35.0% | |
TTTCTCTCTTCAAATCCCTT+CGG | - | chr2.2:53890620-53890639 | None:intergenic | 35.0% | |
! | ATTCCTCAATGGGTTCTTTA+AGG | - | chr2.2:53889935-53889954 | None:intergenic | 35.0% |
! | CTCGTCCTATAATGATTTGT+TGG | + | chr2.2:53891027-53891046 | MS.gene058184:intron | 35.0% |
! | GTTTGGGATCTGAAAATTGT+CGG | - | chr2.2:53890024-53890043 | None:intergenic | 35.0% |
! | GTTTTGCGAATAAGAGAAGT+TGG | - | chr2.2:53890350-53890369 | None:intergenic | 35.0% |
! | TGAGGTCTCTCAATCTTTTA+AGG | - | chr2.2:53891084-53891103 | None:intergenic | 35.0% |
!! | AAGCAGAAGTGTGAATGTTT+TGG | + | chr2.2:53891176-53891195 | MS.gene058184:intron | 35.0% |
!! | CATTGATTTGAGAGTACTTG+TGG | - | chr2.2:53891265-53891284 | None:intergenic | 35.0% |
!!! | ACACCGTTGTATTTTTTCGA+TGG | + | chr2.2:53891675-53891694 | MS.gene058184:intron | 35.0% |
!!! | TCGGTGTTGTACATATGTTT+TGG | + | chr2.2:53890455-53890474 | MS.gene058184:intron | 35.0% |
!!! | TTCAATTTTTGGTGTGTACG+TGG | + | chr2.2:53891352-53891371 | MS.gene058184:intron | 35.0% |
!!! | TTTTTTAGCTCTTAGCTTGC+TGG | + | chr2.2:53891942-53891961 | MS.gene058184:intron | 35.0% |
AAAGAAAAGTGGTTGCCGAA+GGG | + | chr2.2:53890602-53890621 | MS.gene058184:intron | 40.0% | |
AGAGAGAAACATTGGGAAGA+AGG | + | chr2.2:53890631-53890650 | MS.gene058184:intron | 40.0% | |
AGTACGACGACTGTAAACAA+CGG | - | chr2.2:53891468-53891487 | None:intergenic | 40.0% | |
ATAACACAAGTCCGAGGAAT+TGG | + | chr2.2:53890821-53890840 | MS.gene058184:intron | 40.0% | |
ATACTGATAACACAAGTCCG+AGG | + | chr2.2:53890815-53890834 | MS.gene058184:intron | 40.0% | |
ATAGCATAGAGAAGGCTGTA+AGG | + | chr2.2:53890912-53890931 | MS.gene058184:intron | 40.0% | |
ATGGTGTATGAATGGAGTTG+AGG | + | chr2.2:53890865-53890884 | MS.gene058184:intron | 40.0% | |
CAACTCAGAGAGAGTTAACT+CGG | + | chr2.2:53890436-53890455 | MS.gene058184:intron | 40.0% | |
CAGGAACAACCCATATGAAT+GGG | - | chr2.2:53890547-53890566 | None:intergenic | 40.0% | |
CCTAGGAATGATGCTTGATA+CGG | + | chr2.2:53890217-53890236 | MS.gene058184:CDS | 40.0% | |
CTCTATTCTTGTAGTCCACA+AGG | + | chr2.2:53891999-53892018 | MS.gene058184:intron | 40.0% | |
GAATCAGAATTCGTCTGAGA+AGG | - | chr2.2:53890116-53890135 | None:intergenic | 40.0% | |
GAGAGAAACATTGGGAAGAA+GGG | + | chr2.2:53890632-53890651 | MS.gene058184:intron | 40.0% | |
GCAACAGAATGGTGTATGAA+TGG | + | chr2.2:53890857-53890876 | MS.gene058184:intron | 40.0% | |
GCAGTAACATTTAGCTACTC+TGG | + | chr2.2:53891284-53891303 | MS.gene058184:intron | 40.0% | |
GCGAAGAAGAGAAAGAAAAG+TGG | + | chr2.2:53890591-53890610 | MS.gene058184:intron | 40.0% | |
GCTCAATATCTTAACCTGTG+GGG | - | chr2.2:53890678-53890697 | None:intergenic | 40.0% | |
GGAAGAAGGGTTTGATCATT+AGG | + | chr2.2:53890645-53890664 | MS.gene058184:intron | 40.0% | |
GGCTCAATATCTTAACCTGT+GGG | - | chr2.2:53890679-53890698 | None:intergenic | 40.0% | |
TAGATTCAATACCTTCAGGG+AGG | - | chr2.2:53889857-53889876 | None:intergenic | 40.0% | |
TCAGGAACAACCCATATGAA+TGG | - | chr2.2:53890548-53890567 | None:intergenic | 40.0% | |
TCTTCTTTCCCTTTCTTCTC+AGG | - | chr2.2:53890566-53890585 | None:intergenic | 40.0% | |
TGCTCAAGAGAAATCAGAGA+GGG | + | chr2.2:53890370-53890389 | MS.gene058184:CDS | 40.0% | |
TGGCTCAATATCTTAACCTG+TGG | - | chr2.2:53890680-53890699 | None:intergenic | 40.0% | |
TGTAATCCTACAACTCCTTG+TGG | - | chr2.2:53892017-53892036 | None:intergenic | 40.0% | |
TTTGGTAAGGGATTTGGCAT+TGG | - | chr2.2:53889766-53889785 | None:intergenic | 40.0% | |
! | GAGAGATTTGGTAAGGGATT+TGG | - | chr2.2:53889772-53889791 | None:intergenic | 40.0% |
! | GGATGAGAGAGATTTGGTAA+GGG | - | chr2.2:53889778-53889797 | None:intergenic | 40.0% |
!!! | CAATGGATTGTGCCTTTTTG+CGG | + | chr2.2:53890052-53890071 | MS.gene058184:CDS | 40.0% |
AAATCAGAGAGGGGAGATGA+GGG | + | chr2.2:53890380-53890399 | MS.gene058184:CDS | 45.0% | |
AAGATTGAGAGACCTCAAGC+TGG | + | chr2.2:53891087-53891106 | MS.gene058184:intron | 45.0% | |
ACAACACTACGAGAAAGCCA+CGG | + | chr2.2:53890301-53890320 | MS.gene058184:CDS | 45.0% | |
AGCAGGTCACCCATTCATAT+GGG | + | chr2.2:53890535-53890554 | MS.gene058184:intron | 45.0% | |
AGGGTTTGATCATTAGGGGT+TGG | + | chr2.2:53890651-53890670 | MS.gene058184:intron | 45.0% | |
ATTCATTGCGAATGGTCCAC+CGG | + | chr2.2:53889953-53889972 | MS.gene058184:CDS | 45.0% | |
CCACACAAGGTGATATGATG+AGG | - | chr2.2:53890170-53890189 | None:intergenic | 45.0% | |
CCGTATCAAGCATCATTCCT+AGG | - | chr2.2:53890220-53890239 | None:intergenic | 45.0% | |
CCTCATCATATCACCTTGTG+TGG | + | chr2.2:53890167-53890186 | MS.gene058184:CDS | 45.0% | |
CTGCTCAAGAGAAATCAGAG+AGG | + | chr2.2:53890369-53890388 | MS.gene058184:CDS | 45.0% | |
GAAAGAAAAGTGGTTGCCGA+AGG | + | chr2.2:53890601-53890620 | MS.gene058184:intron | 45.0% | |
GAAGGCTGTAAGGAGATTGA+TGG | + | chr2.2:53890922-53890941 | MS.gene058184:intron | 45.0% | |
GAGCAGAGATAGCATAGAGA+AGG | + | chr2.2:53890904-53890923 | MS.gene058184:intron | 45.0% | |
GAGTCGGAGATGATACAATC+CGG | - | chr2.2:53889975-53889994 | None:intergenic | 45.0% | |
GCACAAGCTATTCAAGAAGG+TGG | + | chr2.2:53891004-53891023 | MS.gene058184:intron | 45.0% | |
GCTCAAGAGAAATCAGAGAG+GGG | + | chr2.2:53890371-53890390 | MS.gene058184:CDS | 45.0% | |
GCTCCTTAAAGAACCCATTG+AGG | + | chr2.2:53889929-53889948 | MS.gene058184:CDS | 45.0% | |
GCTGCACAAGCTATTCAAGA+AGG | + | chr2.2:53891001-53891020 | MS.gene058184:intron | 45.0% | |
GCTGTAAGGAGATTGATGGA+CGG | + | chr2.2:53890926-53890945 | MS.gene058184:intron | 45.0% | |
GGCGAAACCACGATGTTATT+AGG | - | chr2.2:53891156-53891175 | None:intergenic | 45.0% | |
GGGTTGTTCCTGAGAAGAAA+GGG | + | chr2.2:53890555-53890574 | MS.gene058184:intron | 45.0% | |
GGGTTTGATCATTAGGGGTT+GGG | + | chr2.2:53890652-53890671 | MS.gene058184:intron | 45.0% | |
TCATTGCAGATAGGACTGCA+GGG | + | chr2.2:53891779-53891798 | MS.gene058184:CDS | 45.0% | |
TGGGTTGTTCCTGAGAAGAA+AGG | + | chr2.2:53890554-53890573 | MS.gene058184:intron | 45.0% | |
TGTAGTCCACAAGGAGTTGT+AGG | + | chr2.2:53892008-53892027 | MS.gene058184:intron | 45.0% | |
TTGCTTCGCTCATTGCAGAT+AGG | + | chr2.2:53891770-53891789 | MS.gene058184:CDS | 45.0% | |
! | AGTACTTGTGGCAGGTATTG+TGG | - | chr2.2:53891253-53891272 | None:intergenic | 45.0% |
! | AGTTCCAATGATAACGTGGC+CGG | + | chr2.2:53890766-53890785 | MS.gene058184:intron | 45.0% |
! | CGGATGAGAGAGATTTGGTA+AGG | - | chr2.2:53889779-53889798 | None:intergenic | 45.0% |
! | GTAAGGGATTTGGCATTGGA+GGG | - | chr2.2:53889762-53889781 | None:intergenic | 45.0% |
! | GTACCCATGGGTTAATGACT+TGG | + | chr2.2:53889998-53890017 | MS.gene058184:CDS | 45.0% |
! | TGGGAGTTCCAATGATAACG+TGG | + | chr2.2:53890762-53890781 | MS.gene058184:intron | 45.0% |
! | TTTTGGCGGTTTTCCACACA+AGG | - | chr2.2:53890183-53890202 | None:intergenic | 45.0% |
!! | GATTTGAGAGTACTTGTGGC+AGG | - | chr2.2:53891261-53891280 | None:intergenic | 45.0% |
!!! | TGTTTTGAGGGTTTCCACGA+GGG | - | chr2.2:53890081-53890100 | None:intergenic | 45.0% |
!!! | TTGTTTTGAGGGTTTCCACG+AGG | - | chr2.2:53890082-53890101 | None:intergenic | 45.0% |
AACCGTAGAGGCTGTTAGTG+TGG | + | chr2.2:53890742-53890761 | MS.gene058184:intron | 50.0% | |
ACAAGTCCGAGGAATTGGAG+TGG | + | chr2.2:53890826-53890845 | MS.gene058184:intron | 50.0% | |
ACCACTTGGAAGATCCATCG+GGG | + | chr2.2:53889900-53889919 | MS.gene058184:CDS | 50.0% | |
ACCGTAGAGGCTGTTAGTGT+GGG | + | chr2.2:53890743-53890762 | MS.gene058184:intron | 50.0% | |
ATATTGAGCCACCCAGCAGT+GGG | + | chr2.2:53890689-53890708 | MS.gene058184:intron | 50.0% | |
ATGGATCTTCCAAGTGGTGG+TGG | - | chr2.2:53889898-53889917 | None:intergenic | 50.0% | |
CAACACTACGAGAAAGCCAC+GGG | + | chr2.2:53890302-53890321 | MS.gene058184:CDS | 50.0% | |
CACCACTTGGAAGATCCATC+GGG | + | chr2.2:53889899-53889918 | MS.gene058184:CDS | 50.0% | |
CAGCAGGTCACCCATTCATA+TGG | + | chr2.2:53890534-53890553 | MS.gene058184:intron | 50.0% | |
CATTGCAGATAGGACTGCAG+GGG | + | chr2.2:53891780-53891799 | MS.gene058184:CDS | 50.0% | |
CCACCACTTGGAAGATCCAT+CGG | + | chr2.2:53889898-53889917 | MS.gene058184:CDS | 50.0% | |
CGACTTCCACTCCAATTCCT+CGG | - | chr2.2:53890835-53890854 | None:intergenic | 50.0% | |
CGAGGAATTGGAGTGGAAGT+CGG | + | chr2.2:53890833-53890852 | MS.gene058184:intron | 50.0% | |
CGATGGATCTCTTGTCGTGT+TGG | + | chr2.2:53891692-53891711 | MS.gene058184:intron | 50.0% | |
CGGCCAAGTCATTAACCCAT+GGG | - | chr2.2:53890004-53890023 | None:intergenic | 50.0% | |
CTCATTGCAGATAGGACTGC+AGG | + | chr2.2:53891778-53891797 | MS.gene058184:CDS | 50.0% | |
GAAATCAGAGAGGGGAGATG+AGG | + | chr2.2:53890379-53890398 | MS.gene058184:CDS | 50.0% | |
GATTTATGACGCATTGCGGG+GGG | + | chr2.2:53890714-53890733 | MS.gene058184:intron | 50.0% | |
GGATTTATGACGCATTGCGG+GGG | + | chr2.2:53890713-53890732 | MS.gene058184:intron | 50.0% | |
GGGATTTATGACGCATTGCG+GGG | + | chr2.2:53890712-53890731 | MS.gene058184:intron | 50.0% | |
GGGGATTTATGACGCATTGC+GGG | + | chr2.2:53890711-53890730 | MS.gene058184:intron | 50.0% | |
GGGGGATTTATGACGCATTG+CGG | + | chr2.2:53890710-53890729 | MS.gene058184:intron | 50.0% | |
GGTCACAAGGTTTGGCATCT+CGG | + | chr2.2:53890323-53890342 | MS.gene058184:CDS | 50.0% | |
GTCATTAACCCATGGGTACG+TGG | - | chr2.2:53889997-53890016 | None:intergenic | 50.0% | |
TCATAAATCCCCCCACTGCT+GGG | - | chr2.2:53890703-53890722 | None:intergenic | 50.0% | |
TCCCACACTAACAGCCTCTA+CGG | - | chr2.2:53890747-53890766 | None:intergenic | 50.0% | |
TCGGAGATGATACAATCCGG+TGG | - | chr2.2:53889972-53889991 | None:intergenic | 50.0% | |
TCGGCCAAGTCATTAACCCA+TGG | - | chr2.2:53890005-53890024 | None:intergenic | 50.0% | |
TGAACCGGCCACGTTATCAT+TGG | - | chr2.2:53890773-53890792 | None:intergenic | 50.0% | |
TGGAAGTCGGTGCAACAGAA+TGG | + | chr2.2:53890846-53890865 | MS.gene058184:intron | 50.0% | |
TGGATCTTCCAAGTGGTGGT+GGG | - | chr2.2:53889897-53889916 | None:intergenic | 50.0% | |
TGTCATTGTCCGTCTGTGGT+GGG | + | chr2.2:53891727-53891746 | MS.gene058184:intron | 50.0% | |
! | AGCGTCGGATGAGAGAGATT+TGG | - | chr2.2:53889784-53889803 | None:intergenic | 50.0% |
! | ATGATAACGTGGCCGGTTCA+TGG | + | chr2.2:53890773-53890792 | MS.gene058184:intron | 50.0% |
! | GGTAAGGGATTTGGCATTGG+AGG | - | chr2.2:53889763-53889782 | None:intergenic | 50.0% |
! | GTAAGGAGATTGATGGACGG+TGG | + | chr2.2:53890929-53890948 | MS.gene058184:intron | 50.0% |
! | TCTCTGAGTTGAGCCAACTC+AGG | - | chr2.2:53890427-53890446 | None:intergenic | 50.0% |
! | TGGTGATGACTGTGACTTGC+TGG | - | chr2.2:53889737-53889756 | None:intergenic | 50.0% |
! | TGTCGTGTTGGTGCATCTGT+TGG | + | chr2.2:53891704-53891723 | MS.gene058184:intron | 50.0% |
! | TTCAGGGAGGCCAACTTGTT+GGG | - | chr2.2:53889844-53889863 | None:intergenic | 50.0% |
!! | TTGGTGTCATTGTCCGTCTG+TGG | + | chr2.2:53891723-53891742 | MS.gene058184:intron | 50.0% |
AACCCATGGGTACGTGGAGT+CGG | - | chr2.2:53889991-53890010 | None:intergenic | 55.0% | |
AAGCCACGGGTCACAAGGTT+TGG | + | chr2.2:53890315-53890334 | MS.gene058184:CDS | 55.0% | |
AGGCTACGTGCTCGAGAGTT+TGG | + | chr2.2:53890971-53890990 | MS.gene058184:intron | 55.0% | |
AGTCGACGGTGTGAAGACGA+AGG | - | chr2.2:53889815-53889834 | None:intergenic | 55.0% | |
ATGAGCACGAGAGCCTGAGT+TGG | + | chr2.2:53890411-53890430 | MS.gene058184:intron | 55.0% | |
ATGCCAAACCTTGTGACCCG+TGG | - | chr2.2:53890321-53890340 | None:intergenic | 55.0% | |
ATGTCCTGACCCACCACAGA+CGG | - | chr2.2:53891739-53891758 | None:intergenic | 55.0% | |
CCGATGGATCTTCCAAGTGG+TGG | - | chr2.2:53889901-53889920 | None:intergenic | 55.0% | |
CTTCAGGGAGGCCAACTTGT+TGG | - | chr2.2:53889845-53889864 | None:intergenic | 55.0% | |
GACTTCCCCTCCCAACAAGT+TGG | + | chr2.2:53889831-53889850 | MS.gene058184:CDS | 55.0% | |
GATATTGAGCCACCCAGCAG+TGG | + | chr2.2:53890688-53890707 | MS.gene058184:intron | 55.0% | |
GGTGTGAAGACGAAGGAACG+AGG | - | chr2.2:53889808-53889827 | None:intergenic | 55.0% | |
GTCATAAATCCCCCCACTGC+TGG | - | chr2.2:53890704-53890723 | None:intergenic | 55.0% | |
TATTGAGCCACCCAGCAGTG+GGG | + | chr2.2:53890690-53890709 | MS.gene058184:intron | 55.0% | |
TTGTTGGGAGGGGAAGTCGA+CGG | - | chr2.2:53889829-53889848 | None:intergenic | 55.0% | |
! | ACGAAGGAACGAGGAAGCGT+CGG | - | chr2.2:53889799-53889818 | None:intergenic | 55.0% |
! | CAACAAGTTGGCCTCCCTGA+AGG | + | chr2.2:53889843-53889862 | MS.gene058184:CDS | 55.0% |
! | GGATCTTCCAAGTGGTGGTG+GGG | - | chr2.2:53889896-53889915 | None:intergenic | 55.0% |
! | GGATTTGGCATTGGAGGGAG+TGG | - | chr2.2:53889757-53889776 | None:intergenic | 55.0% |
! | GTGTCATTGTCCGTCTGTGG+TGG | + | chr2.2:53891726-53891745 | MS.gene058184:intron | 55.0% |
!! | TGACTGTGACTTGCTGGCCA+CGG | - | chr2.2:53889731-53889750 | None:intergenic | 55.0% |
!! | TGTGGTGGGTCAGGACATGT+CGG | + | chr2.2:53891741-53891760 | MS.gene058184:intron | 55.0% |
ATTGAGCCACCCAGCAGTGG+GGG | + | chr2.2:53890691-53890710 | MS.gene058184:intron | 60.0% | |
CAGATAGGACTGCAGGGGTG+TGG | + | chr2.2:53891785-53891804 | MS.gene058184:CDS | 60.0% | |
CCACGAGGGAGACCGCAAAA+AGG | - | chr2.2:53890067-53890086 | None:intergenic | 60.0% | |
CGAGAAAGCCACGGGTCACA+AGG | + | chr2.2:53890310-53890329 | MS.gene058184:CDS | 60.0% | |
CTCCGACTCCACGTACCCAT+GGG | + | chr2.2:53889986-53890005 | MS.gene058184:CDS | 60.0% | |
GCCCCGATGGATCTTCCAAG+TGG | - | chr2.2:53889904-53889923 | None:intergenic | 60.0% | |
TAAATCCCCCCACTGCTGGG+TGG | - | chr2.2:53890700-53890719 | None:intergenic | 60.0% | |
TCTCCGACTCCACGTACCCA+TGG | + | chr2.2:53889985-53890004 | MS.gene058184:CDS | 60.0% | |
! | CCTTTTTGCGGTCTCCCTCG+TGG | + | chr2.2:53890064-53890083 | MS.gene058184:CDS | 60.0% |
!! | AGGGAGGCCAACTTGTTGGG+AGG | - | chr2.2:53889841-53889860 | None:intergenic | 60.0% |
!! | GACTGTGACTTGCTGGCCAC+GGG | - | chr2.2:53889730-53889749 | None:intergenic | 60.0% |
!! | GGAGGCCAACTTGTTGGGAG+GGG | - | chr2.2:53889839-53889858 | None:intergenic | 60.0% |
!! | GGGAGGCCAACTTGTTGGGA+GGG | - | chr2.2:53889840-53889859 | None:intergenic | 60.0% |
!! | TAAGGAGCATTGCGCCCCGA+TGG | - | chr2.2:53889917-53889936 | None:intergenic | 60.0% |
!! | TTGTCCGTCTGTGGTGGGTC+AGG | + | chr2.2:53891732-53891751 | MS.gene058184:intron | 60.0% |
CATTAGGGGTTGGGCCCCAC+AGG | + | chr2.2:53890661-53890680 | MS.gene058184:intron | 65.0% | |
CCACTGACCCCACCACCACT+TGG | + | chr2.2:53889886-53889905 | MS.gene058184:CDS | 65.0% | |
CGGGGGGAACTCAACCGTAG+AGG | + | chr2.2:53890730-53890749 | MS.gene058184:intron | 65.0% | |
GCTTGCGCGCTAGAAGCAGC+AGG | + | chr2.2:53890518-53890537 | MS.gene058184:intron | 65.0% | |
GGTGGGTCAGGACATGTCGG+TGG | + | chr2.2:53891744-53891763 | MS.gene058184:intron | 65.0% | |
TTGAGCCACCCAGCAGTGGG+GGG | + | chr2.2:53890692-53890711 | MS.gene058184:intron | 65.0% | |
!! | AGTGGTGGTGGGGTCAGTGG+TGG | - | chr2.2:53889886-53889905 | None:intergenic | 65.0% |
!! | CCAAGTGGTGGTGGGGTCAG+TGG | - | chr2.2:53889889-53889908 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 53889717 | 53892049 | 53889717 | ID=MS.gene058184 |
chr2.2 | mRNA | 53889717 | 53892049 | 53889717 | ID=MS.gene058184.t1;Parent=MS.gene058184 |
chr2.2 | exon | 53889717 | 53890406 | 53889717 | ID=MS.gene058184.t1.exon1;Parent=MS.gene058184.t1 |
chr2.2 | CDS | 53889717 | 53890406 | 53889717 | ID=cds.MS.gene058184.t1;Parent=MS.gene058184.t1 |
chr2.2 | exon | 53891754 | 53891806 | 53891754 | ID=MS.gene058184.t1.exon2;Parent=MS.gene058184.t1 |
chr2.2 | CDS | 53891754 | 53891806 | 53891754 | ID=cds.MS.gene058184.t1;Parent=MS.gene058184.t1 |
chr2.2 | exon | 53892013 | 53892049 | 53892013 | ID=MS.gene058184.t1.exon3;Parent=MS.gene058184.t1 |
chr2.2 | CDS | 53892013 | 53892049 | 53892013 | ID=cds.MS.gene058184.t1;Parent=MS.gene058184.t1 |
Gene Sequence |
Protein sequence |